Synthesis and characterisation of oxorhenium(V) and tricarbonylrhenium(I) complexes with biologically active N, O and N, S-Donor ligands
- Authors: Mukiza, Janvier
- Date: 2013
- Subjects: Rhenium , Rhenium compounds , Ligands
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10437 , http://hdl.handle.net/10948/d1020769
- Description: This study investigated the synthesis of rhenium(I) and rhenium(V) complexes with a variety of multidentate NS, NSO, NO and SO-donor ligands. It also investigated the synthesis of dinuclear dihalogeno- and trihalogeno-bridged rhenium(I) complexes based on the fac-[Re(CO)3]+ core. The reactions of hydrated folic acid with [Re(CO)5X] (X = Cl, Br) were studied, and the complexes [Re(CO)3(H2O)3]+[Re2(μ-X)3CO)6]−.5H2O [X= Br (1), Cl(2)] were isolated. The reaction of orotic acid potassium salt [Re(CO)5Br] was performed, and the complex [Re2(μ-Br)2(CO)8] was isolated. The reaction of bis(piperidin-1- yl)methanone with [Re(CO)5Cl] followed by recrystallisation of the resulting precipitate in dichloromethane/acetontrile resulted in the complex [Re2(μ- Cl)2(CO)6(MeCN)2]. The X-ray crystal structures show that all these complexes display a distorted octahedral geometry around the central rhenium atoms. The reactions of aroylhydrazone-based ligands such as 3-((pyridin- 2yl)methyleneamino)-2,3-dihydro-2-pyridin-2yl)quinazolin-4-(1H)-one (Hppq) and N-(di(pyridin-2-yl)methylene)benzohydrazide (Hdpmb) with [Re(CO)5Cl] were studied and led to the formation of the complexes [Re(CO)3Cl(Hdpmb)] and [Re(CO)3Cl(Hppq)]. The Hdpmb and Hppq coordinated to the fac-[Re(CO)3]+ core as neutral bidentate chalates via the pyridinic nitrogens (for Hdpmb) and via imino and pyridinic nitrogens for Hppq. The X-ray crystal structures show that the geometry around the rhenium in both complexes is a distorted octahedral. The treatment of the dithizone (H2dz) ligand with rhenium(V) precursors containing a triphenylphosphine group (PPh3) led to the decomposition of dithizone. The decomposition product reacted with the triphenylphosphine group and generated a new ligand triphenylphosphazeno-N-phenylmethanethiohydrazide (H2L). The reaction of trans-[ReOX3(PPh3)2] (X = Cl, Br) with dithizone (H2dz) led to the complex [ReO(dz)2][ReO(HL)2]. The reaction of trans-[ReOI2(OEt)(PPh3)2] with H2dz led to the same product. The reaction of cis-[ReO2I(PPh3)2] with H2dz in methanol led to [ReO(dz)2][ReO(HL)2](MeOH)2 in which methanol bonded to HLvia hydrogen bonds. The H2dz was doubly deprotonated and coordinated to the [ReO]3+ moiety via a thiolate sulfur and deprotonated hydrazinic nitrogen to yield [ReO(dz)2]−, while the H2L was singly deprotonated and coordinated to [ReO]3+ moiety via the neutral sulfur atom and deprotonated hydrazinic nitrogen to yield [ReO(HL)2]+. The X-ray crystal structure show that in both [ReO(HL)2]+ and [ReO(dz)2]−, the rhenium atoms are five-coordinated and adopt a distorted squarebased pyramidal geometry. The reaction of thiosemicarbazones such as salcylidene-4- phenylthiosemicarbazide (H3salpt) with cis-[ReO2I(PPh3)2] was investigated and led to the complex [ReO(Hsalpt)(H2salpt)]. The X-ray study reveals that Hsalpt is present as a tridentate chelate coordinating via the thiolate sulfur, imino nitrogen and phenolic oxygen, while H2salpt coordinates as a bidentate chelate via the thiolate sulfur and imino nitrogen atoms. The geometry around rhenium is distorted octahedral. The coordination mode of the benzoylthiourea derivatives 4-tert-butyl-N- (diphenylcarbamothioyl)benzamide (Htpb) and N-(diethylcarbamothioyl)benzamide (Heb) to the [Re2O3]4+ and fac-[Re(CO)3]+ cores were investigated. The reaction of [Re(CO)5Cl] in presence of sodium acetate with Htpb led to the dimeric complex [Re(CO)3(tpb)]2 in which the tpb coordinated to the fac-[Re(CO)3]+ core via the ketonic oxygen and bridging thiolate sulfur. The same reaction with Heb led to the monomeric complex [Re(CO)3(eb)(Heb)], in which the eb coordinates to the fac-[Re(CO)3]+core via thiolate sulfur and ketonic oxygen with Heb binding via the neutral sulfur atom. The reaction of Heb with cis-[ReO2I(PPh3)2] at room temperature with excess of sodium acetate led to the dimeric complex (μ-O)[ReO(eb)2]2 in which Heb is present as a monoanionic (deprotonated) bidentate with coordination through the thiolate sulfur and ketonic oxygen.
- Full Text:
- Date Issued: 2013
- Authors: Mukiza, Janvier
- Date: 2013
- Subjects: Rhenium , Rhenium compounds , Ligands
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10437 , http://hdl.handle.net/10948/d1020769
- Description: This study investigated the synthesis of rhenium(I) and rhenium(V) complexes with a variety of multidentate NS, NSO, NO and SO-donor ligands. It also investigated the synthesis of dinuclear dihalogeno- and trihalogeno-bridged rhenium(I) complexes based on the fac-[Re(CO)3]+ core. The reactions of hydrated folic acid with [Re(CO)5X] (X = Cl, Br) were studied, and the complexes [Re(CO)3(H2O)3]+[Re2(μ-X)3CO)6]−.5H2O [X= Br (1), Cl(2)] were isolated. The reaction of orotic acid potassium salt [Re(CO)5Br] was performed, and the complex [Re2(μ-Br)2(CO)8] was isolated. The reaction of bis(piperidin-1- yl)methanone with [Re(CO)5Cl] followed by recrystallisation of the resulting precipitate in dichloromethane/acetontrile resulted in the complex [Re2(μ- Cl)2(CO)6(MeCN)2]. The X-ray crystal structures show that all these complexes display a distorted octahedral geometry around the central rhenium atoms. The reactions of aroylhydrazone-based ligands such as 3-((pyridin- 2yl)methyleneamino)-2,3-dihydro-2-pyridin-2yl)quinazolin-4-(1H)-one (Hppq) and N-(di(pyridin-2-yl)methylene)benzohydrazide (Hdpmb) with [Re(CO)5Cl] were studied and led to the formation of the complexes [Re(CO)3Cl(Hdpmb)] and [Re(CO)3Cl(Hppq)]. The Hdpmb and Hppq coordinated to the fac-[Re(CO)3]+ core as neutral bidentate chalates via the pyridinic nitrogens (for Hdpmb) and via imino and pyridinic nitrogens for Hppq. The X-ray crystal structures show that the geometry around the rhenium in both complexes is a distorted octahedral. The treatment of the dithizone (H2dz) ligand with rhenium(V) precursors containing a triphenylphosphine group (PPh3) led to the decomposition of dithizone. The decomposition product reacted with the triphenylphosphine group and generated a new ligand triphenylphosphazeno-N-phenylmethanethiohydrazide (H2L). The reaction of trans-[ReOX3(PPh3)2] (X = Cl, Br) with dithizone (H2dz) led to the complex [ReO(dz)2][ReO(HL)2]. The reaction of trans-[ReOI2(OEt)(PPh3)2] with H2dz led to the same product. The reaction of cis-[ReO2I(PPh3)2] with H2dz in methanol led to [ReO(dz)2][ReO(HL)2](MeOH)2 in which methanol bonded to HLvia hydrogen bonds. The H2dz was doubly deprotonated and coordinated to the [ReO]3+ moiety via a thiolate sulfur and deprotonated hydrazinic nitrogen to yield [ReO(dz)2]−, while the H2L was singly deprotonated and coordinated to [ReO]3+ moiety via the neutral sulfur atom and deprotonated hydrazinic nitrogen to yield [ReO(HL)2]+. The X-ray crystal structure show that in both [ReO(HL)2]+ and [ReO(dz)2]−, the rhenium atoms are five-coordinated and adopt a distorted squarebased pyramidal geometry. The reaction of thiosemicarbazones such as salcylidene-4- phenylthiosemicarbazide (H3salpt) with cis-[ReO2I(PPh3)2] was investigated and led to the complex [ReO(Hsalpt)(H2salpt)]. The X-ray study reveals that Hsalpt is present as a tridentate chelate coordinating via the thiolate sulfur, imino nitrogen and phenolic oxygen, while H2salpt coordinates as a bidentate chelate via the thiolate sulfur and imino nitrogen atoms. The geometry around rhenium is distorted octahedral. The coordination mode of the benzoylthiourea derivatives 4-tert-butyl-N- (diphenylcarbamothioyl)benzamide (Htpb) and N-(diethylcarbamothioyl)benzamide (Heb) to the [Re2O3]4+ and fac-[Re(CO)3]+ cores were investigated. The reaction of [Re(CO)5Cl] in presence of sodium acetate with Htpb led to the dimeric complex [Re(CO)3(tpb)]2 in which the tpb coordinated to the fac-[Re(CO)3]+ core via the ketonic oxygen and bridging thiolate sulfur. The same reaction with Heb led to the monomeric complex [Re(CO)3(eb)(Heb)], in which the eb coordinates to the fac-[Re(CO)3]+core via thiolate sulfur and ketonic oxygen with Heb binding via the neutral sulfur atom. The reaction of Heb with cis-[ReO2I(PPh3)2] at room temperature with excess of sodium acetate led to the dimeric complex (μ-O)[ReO(eb)2]2 in which Heb is present as a monoanionic (deprotonated) bidentate with coordination through the thiolate sulfur and ketonic oxygen.
- Full Text:
- Date Issued: 2013
Synthesis of fluorescent polymers with coumarin backbones by "click" polymerization
- Authors: Okerio, Jaspher Mosomi
- Date: 2013
- Subjects: Polymerization , Fluorescent polymers
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10431 , http://hdl.handle.net/10948/d1020132
- Description: Click chemistry is one of the growing areas of research which is applied in the design and synthesis of a wide range of polymeric architectures. This investigation focuses on the synthesis of fluorescent coumarin based polymers by “click” A-B step growth polymerization process and evaluation of their photophysical properties. Non-fluorescent azide-alkyne functionalized coumarin-based monomers were synthesized in multiple steps from 2,4-dihydroxybenzaldehyde in reasonable yields. Polymers with coumarin backbone were synthesized from azide-alkyne functionalized coumarin monomers via the Cu(I) catalyzed 1,3-dipolar cycloaddition reaction between azides and alkynes, a typical click reaction, to form polymers whose repeating units are connected by a 1,2,3-triazole ring. The structures of the synthesized polymers were confirmed by NMR and FT-IR spectroscopy. Finally, the photophysical properties of the synthesized monomers and polymers were evaluated in DMF. All coumarin based monomers showed reduced fluorescent properties due to the quenching effect from the azido group. Although all polymers absorbed at maximum wavelength of 340 nm, a characteristic for coumarin chromophore, the homo-polymers emitted at a shorter wavelength of 413 nm as compared to the co-polymers which emitted at 421 nm.
- Full Text:
- Date Issued: 2013
- Authors: Okerio, Jaspher Mosomi
- Date: 2013
- Subjects: Polymerization , Fluorescent polymers
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10431 , http://hdl.handle.net/10948/d1020132
- Description: Click chemistry is one of the growing areas of research which is applied in the design and synthesis of a wide range of polymeric architectures. This investigation focuses on the synthesis of fluorescent coumarin based polymers by “click” A-B step growth polymerization process and evaluation of their photophysical properties. Non-fluorescent azide-alkyne functionalized coumarin-based monomers were synthesized in multiple steps from 2,4-dihydroxybenzaldehyde in reasonable yields. Polymers with coumarin backbone were synthesized from azide-alkyne functionalized coumarin monomers via the Cu(I) catalyzed 1,3-dipolar cycloaddition reaction between azides and alkynes, a typical click reaction, to form polymers whose repeating units are connected by a 1,2,3-triazole ring. The structures of the synthesized polymers were confirmed by NMR and FT-IR spectroscopy. Finally, the photophysical properties of the synthesized monomers and polymers were evaluated in DMF. All coumarin based monomers showed reduced fluorescent properties due to the quenching effect from the azido group. Although all polymers absorbed at maximum wavelength of 340 nm, a characteristic for coumarin chromophore, the homo-polymers emitted at a shorter wavelength of 413 nm as compared to the co-polymers which emitted at 421 nm.
- Full Text:
- Date Issued: 2013
Synthesis of fluorescent polymers with pendant triazole-substituted coumarin side-chains via a combination of click chemistry and raft-mediated polymerization
- Authors: Wali, Nwabisa Whitney
- Date: 2013
- Subjects: Fluorescent polymers , Polymerization , Macromolecules -- Synthesis
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10432 , http://hdl.handle.net/10948/d1020142
- Description: This research project focuses on the synthesis of fluorescent polymers with pendant triazole-substituted coumarin side chain units. Copper(I)-catalyzed Huisgen’s 1,3-dipolar cycloaddition of alkynes with azides to form a 1,2,3-triazole ring, a typical example of “click” reaction, has been utilized for the synthesis of a novel vinyl monomer, 2-oxo-3-(4- vinyl-1H-1,2,3-triazol-1-yl)-2H-chromen-7-yl acetate 62. The monomer and its precursors were synthesised and characterized using 1D- and 2D-NMR and FT-IR. Coumarin-containing triazole polymers were synthesised using free radical polymerization. Reversible Addition-Fragmentation Chain Transfer (RAFT)-mediated polymerization was used to synthesise well defined coumarin-containing triazole polymers with moderate PDI values. The polymers were characterised using 1H-NMR and FT-IR. Modelling of the monomer precursor 61 and the monomer 62 at DFT level of approximation provided useful insights into possible conformations adopted by the monomer precursor 61 and the monomer 62. The photophysical properties of the novel monomer and the synthesised polymers were investigated in a polar solvent.
- Full Text:
- Date Issued: 2013
- Authors: Wali, Nwabisa Whitney
- Date: 2013
- Subjects: Fluorescent polymers , Polymerization , Macromolecules -- Synthesis
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10432 , http://hdl.handle.net/10948/d1020142
- Description: This research project focuses on the synthesis of fluorescent polymers with pendant triazole-substituted coumarin side chain units. Copper(I)-catalyzed Huisgen’s 1,3-dipolar cycloaddition of alkynes with azides to form a 1,2,3-triazole ring, a typical example of “click” reaction, has been utilized for the synthesis of a novel vinyl monomer, 2-oxo-3-(4- vinyl-1H-1,2,3-triazol-1-yl)-2H-chromen-7-yl acetate 62. The monomer and its precursors were synthesised and characterized using 1D- and 2D-NMR and FT-IR. Coumarin-containing triazole polymers were synthesised using free radical polymerization. Reversible Addition-Fragmentation Chain Transfer (RAFT)-mediated polymerization was used to synthesise well defined coumarin-containing triazole polymers with moderate PDI values. The polymers were characterised using 1H-NMR and FT-IR. Modelling of the monomer precursor 61 and the monomer 62 at DFT level of approximation provided useful insights into possible conformations adopted by the monomer precursor 61 and the monomer 62. The photophysical properties of the novel monomer and the synthesised polymers were investigated in a polar solvent.
- Full Text:
- Date Issued: 2013
Synthesis, optical and morphological characterization of CdSe/ZnSe quantum dots for cytotoxicity studies
- Authors: Nkaule, Anati Nomxolisi
- Date: 2013
- Subjects: Quantum dots , Quantum dots -- Optical properties
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10434 , http://hdl.handle.net/10948/d1020637
- Description: Colon cancer (CC) ranks high in morbidity and mortality amongst the most frequent occurring cancers worldwide. Mortality rates are mostly caused by mis-diagnosis and the poor efficacy of treatment. The aim of this study was to enhance our insights of quantum dots, for early detection and targeted drug delivery, thereby reducing toxicity to normal cells and reducing side effects that are caused by previous colon cancer medicine. The synthesis, characterization and cytotoxicity studies of CdSe/ZnSe quantum dots (QDs), nanocrystals are reported. Toxicological properties of the Cd2+ core are reduced by capping quantum dots with ZnSe, varying chain length and functional group ligands. Fluorescence wavelength and their size is improved by varying Cd2+ source and varying nanocrystal synthesis growth temperature. CdSe/ZnSe quantum dots are characterized with FT-IR to elucidate their structure. High-resolution transmission electron microscopy (HRTEM), X-Ray Diffraction (EDX), Photoluminescence spectroscopy (PL) and Ultraviolet-visible spectroscopy (UV-Vis) are used to measure their size and composition. Ligand exchange reactions are conducted with the use of 3-Mercaptopropanoic acid (3-MPA) to facilitate bio-compatibility and stability of CdSe/ZnSe QDs. Temperature stability of various ligand capped and stabilized CdSe/ZnSe QDs are measured by using thermogravimetric analysis (TGA). Caco-2 cell line is cultured from colon cancer, and cytotoxic studies are conducted to test for cell viability of various capped 3-Mercaptopropanoic acid (3-MPA) CdSe/ZnSe quantum dots at various concentrations. Myristic acid capped CdSe/ZnSe quantum dots produce high fluorescing mono-disperse quantum dots. The capping material, synthesis temperature and Cd2+ source of CdSe/ZnSe QDs affect fluorescence wavelength and thermal stability of quantum dots. Fluorescence wavelength is improved by using CdCl2.7H2O source of Cd2+. Cytotoxicity was found to be dependent on the concentration and the capping material of quantum dots. CdSe/ZnSe quantum dots toxicity is adjusted and reduced by varying the length, size and type of the capping ligand on the surface of quantum dots.
- Full Text:
- Date Issued: 2013
- Authors: Nkaule, Anati Nomxolisi
- Date: 2013
- Subjects: Quantum dots , Quantum dots -- Optical properties
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10434 , http://hdl.handle.net/10948/d1020637
- Description: Colon cancer (CC) ranks high in morbidity and mortality amongst the most frequent occurring cancers worldwide. Mortality rates are mostly caused by mis-diagnosis and the poor efficacy of treatment. The aim of this study was to enhance our insights of quantum dots, for early detection and targeted drug delivery, thereby reducing toxicity to normal cells and reducing side effects that are caused by previous colon cancer medicine. The synthesis, characterization and cytotoxicity studies of CdSe/ZnSe quantum dots (QDs), nanocrystals are reported. Toxicological properties of the Cd2+ core are reduced by capping quantum dots with ZnSe, varying chain length and functional group ligands. Fluorescence wavelength and their size is improved by varying Cd2+ source and varying nanocrystal synthesis growth temperature. CdSe/ZnSe quantum dots are characterized with FT-IR to elucidate their structure. High-resolution transmission electron microscopy (HRTEM), X-Ray Diffraction (EDX), Photoluminescence spectroscopy (PL) and Ultraviolet-visible spectroscopy (UV-Vis) are used to measure their size and composition. Ligand exchange reactions are conducted with the use of 3-Mercaptopropanoic acid (3-MPA) to facilitate bio-compatibility and stability of CdSe/ZnSe QDs. Temperature stability of various ligand capped and stabilized CdSe/ZnSe QDs are measured by using thermogravimetric analysis (TGA). Caco-2 cell line is cultured from colon cancer, and cytotoxic studies are conducted to test for cell viability of various capped 3-Mercaptopropanoic acid (3-MPA) CdSe/ZnSe quantum dots at various concentrations. Myristic acid capped CdSe/ZnSe quantum dots produce high fluorescing mono-disperse quantum dots. The capping material, synthesis temperature and Cd2+ source of CdSe/ZnSe QDs affect fluorescence wavelength and thermal stability of quantum dots. Fluorescence wavelength is improved by using CdCl2.7H2O source of Cd2+. Cytotoxicity was found to be dependent on the concentration and the capping material of quantum dots. CdSe/ZnSe quantum dots toxicity is adjusted and reduced by varying the length, size and type of the capping ligand on the surface of quantum dots.
- Full Text:
- Date Issued: 2013
Target selection from airborne magnetic and radiometric data in Steinhausen area, Namibia
- Authors: Naudé, Corus
- Date: 2013 , 2012-11-09
- Subjects: Geomagnetism -- Maps -- Namibia , Geological surveys -- Namibia , Magnetometers , Aeromagnetic prospecting -- Namibia
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4895 , http://hdl.handle.net/10962/d1001520 , Geomagnetism -- Maps -- Namibia , Geological surveys -- Namibia , Magnetometers , Aeromagnetic prospecting -- Namibia
- Description: The eastern branch of the late Proterozoic Damara Orogenic Belt of central Namibia hosts various copper, gold, manganese and uranium deposits, but in the vicinity of Steinhausen, approximately 145 km northeast of Windhoek, the Damara Belt becomes increasingly covered by recent Kalahari cover sediments resulting in little known geology and subsequent lack of discovered economic mineral deposits. Airborne magnetic and radiometric data over the Steinhausen Study Area was enhanced through image processing and filtering to accentuate characteristics of subsurface geology that, by comparing these characteristics to known geology, aided in the interpretive mapping of lithology, structure and targets for follow-up exploration. As a result, some important observations regarding the regional lithology can be drawn. An arenaceous stratigraphic unit that includes a coarse grained, glassy quartzite below the Kuiseb Formation equates to either the eastern Damaran equivalent of the Nosib Group subjected to high grade metamorphism or, alternatively, the upper part of the pre-Damaran sequence, immediately underlying the Damara. The Kuiseb Formation within the study area is uncharacteristically varied as compared to the same formation further west along the Damaran Orogen and can be subdivided into 5 separate units based on geophysical signature. Structural features evident within the study area include the prominent Kudu and Okahandja Lineaments and straddle an area of inferred uplifted stratigraphy of possibly pre-Damara age. The Ekuja Dome (Kibaran age and host to the Omitiomire copper deposit) is also clearly discernible on the airborne magnetic data and is cross-cut by an east-northeast structural zone. Direct targets for follow-up exploration include the Rodenbeck intrusion, anomalous magnetic bodies and numerous radiometric anomalies present within the study area. Identified dome-like features are considered prospective for Omitiomire-style deposits and the Okatjuru Layered Complex is considered a possible source of copper, chromite, magnetite, ilmenite, nickel and the platinum group elements.
- Full Text:
- Date Issued: 2013
- Authors: Naudé, Corus
- Date: 2013 , 2012-11-09
- Subjects: Geomagnetism -- Maps -- Namibia , Geological surveys -- Namibia , Magnetometers , Aeromagnetic prospecting -- Namibia
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4895 , http://hdl.handle.net/10962/d1001520 , Geomagnetism -- Maps -- Namibia , Geological surveys -- Namibia , Magnetometers , Aeromagnetic prospecting -- Namibia
- Description: The eastern branch of the late Proterozoic Damara Orogenic Belt of central Namibia hosts various copper, gold, manganese and uranium deposits, but in the vicinity of Steinhausen, approximately 145 km northeast of Windhoek, the Damara Belt becomes increasingly covered by recent Kalahari cover sediments resulting in little known geology and subsequent lack of discovered economic mineral deposits. Airborne magnetic and radiometric data over the Steinhausen Study Area was enhanced through image processing and filtering to accentuate characteristics of subsurface geology that, by comparing these characteristics to known geology, aided in the interpretive mapping of lithology, structure and targets for follow-up exploration. As a result, some important observations regarding the regional lithology can be drawn. An arenaceous stratigraphic unit that includes a coarse grained, glassy quartzite below the Kuiseb Formation equates to either the eastern Damaran equivalent of the Nosib Group subjected to high grade metamorphism or, alternatively, the upper part of the pre-Damaran sequence, immediately underlying the Damara. The Kuiseb Formation within the study area is uncharacteristically varied as compared to the same formation further west along the Damaran Orogen and can be subdivided into 5 separate units based on geophysical signature. Structural features evident within the study area include the prominent Kudu and Okahandja Lineaments and straddle an area of inferred uplifted stratigraphy of possibly pre-Damara age. The Ekuja Dome (Kibaran age and host to the Omitiomire copper deposit) is also clearly discernible on the airborne magnetic data and is cross-cut by an east-northeast structural zone. Direct targets for follow-up exploration include the Rodenbeck intrusion, anomalous magnetic bodies and numerous radiometric anomalies present within the study area. Identified dome-like features are considered prospective for Omitiomire-style deposits and the Okatjuru Layered Complex is considered a possible source of copper, chromite, magnetite, ilmenite, nickel and the platinum group elements.
- Full Text:
- Date Issued: 2013
Technology transfer of antibacterial oral solid dosage form in a pharmaceutical industry
- Authors: Ramloll, Jason
- Date: 2013
- Subjects: Clinical pharmacology Pharmacy -- Research , Pharmaceutical industry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47913 , vital:40398
- Description: Technology transfer (TT) looks at the transfer of intellectual property from one manufacturing site to another. If carried out successfully, a TT can increase the leveraging capability of the company acquiring the intellectual property together with its brand strength. This in turn aids in a decreased time to market of the final dosage form produced. The aim of the research was to assess the TT of an antibacterial oral solid dosage form from one manufacturing site to another. An expected change of manufacturing equipment from a single-pot to a multi-phase system took place due to the equipment available at the receiving unit. The assessment done by the researcher was performed in the capacity of an observer. The assessment of the TT was performed by observing the critical stages during the transfer process, namely the development and validation stages. Prior to the start of the development stage, a characterisation of innovator was performed. At this stage, innovator batches received from the Sending Unit (SU) were characterised to allow for a means of comparison. The development stage allows for the determination of the robustness of the formulation to be used whilst the validation stage will look at the reproducibility of the chosen formulation. During the development stage, small scale trials were manufactured with amendments made to the original formulation. The amendments allowed for a formulation more comparable to the innovator product with regards to its dissolution profile. The comparable batch produced at a small scale was then up-scaled to a production scale batch and these were compared to the innovator products. The amendments made were on the amount of granulation fluid and binder as well as the method of addition of the disintegrant. When a large scale batch comparable to that of the innovator product was produced, the validation stage was started. With the aim of showing reproducibility of the Receiving Unit (RU) at producing large scale batches, three batches were produced. These were tested for all critical parameters, namely through the loss on drying, particle size distribution, hardness, disintegration and dissolution tests and, the results of the tests were compared to the specifications set by the SU. They were also compared to each other, enabling statistical determination of any significant difference across the batches through the use of comparative statistical analyses. Comparison of batches, at the development and validation stage, was done using the dissolution potential of the batches. These were performed through the use of statistical analyses. The RU made use of the similarity factor (F2) to compare the dissolution profiles. For the purpose of this research, the 1-Way analysis of variance was also used, which compared to the similarity factor, took in consideration the level of variance of the batches produced. Results and discussion: During the development stage amendments were made to produce a batch comparable to the innovator product. The amendments that led to the production of a comparable batch consisted of an extra 14 % of granulation fluid as well as 50 % of the disintegrant being added intra-granularly with the other 50 % added extra-granularly. The amendments were added on top of the amount suggested by the SU. This formulation was used and three batches produced consecutively. On comparison to the specifications set by the SU, the three batches were seen to be within the specifications. On comparison to each other, the dissolution profiles were seen to be different. Conclusion and recommendation: The development stage producing batches within the specifications set by the SU but also comparable with regards to its dissolution profile, was seen to be successful. The validation stage was seen to be unsuccessful. Even though the results of the critical parameters were within specifications, when compared to each other, the batches were seen to be significantly different. This led to the research looking at the TT as a whole as being unsuccessful. The researcher then determined what stage could be improved and how this could be done. The various stages seen as having associated problems were determined and ways to mitigate those were determined. A guideline in the form of a flow chart was proposed to aid a manufacturing facility undertaking a TT to shorten the period of time to completion as well as increase the chance of success.
- Full Text:
- Date Issued: 2013
- Authors: Ramloll, Jason
- Date: 2013
- Subjects: Clinical pharmacology Pharmacy -- Research , Pharmaceutical industry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47913 , vital:40398
- Description: Technology transfer (TT) looks at the transfer of intellectual property from one manufacturing site to another. If carried out successfully, a TT can increase the leveraging capability of the company acquiring the intellectual property together with its brand strength. This in turn aids in a decreased time to market of the final dosage form produced. The aim of the research was to assess the TT of an antibacterial oral solid dosage form from one manufacturing site to another. An expected change of manufacturing equipment from a single-pot to a multi-phase system took place due to the equipment available at the receiving unit. The assessment done by the researcher was performed in the capacity of an observer. The assessment of the TT was performed by observing the critical stages during the transfer process, namely the development and validation stages. Prior to the start of the development stage, a characterisation of innovator was performed. At this stage, innovator batches received from the Sending Unit (SU) were characterised to allow for a means of comparison. The development stage allows for the determination of the robustness of the formulation to be used whilst the validation stage will look at the reproducibility of the chosen formulation. During the development stage, small scale trials were manufactured with amendments made to the original formulation. The amendments allowed for a formulation more comparable to the innovator product with regards to its dissolution profile. The comparable batch produced at a small scale was then up-scaled to a production scale batch and these were compared to the innovator products. The amendments made were on the amount of granulation fluid and binder as well as the method of addition of the disintegrant. When a large scale batch comparable to that of the innovator product was produced, the validation stage was started. With the aim of showing reproducibility of the Receiving Unit (RU) at producing large scale batches, three batches were produced. These were tested for all critical parameters, namely through the loss on drying, particle size distribution, hardness, disintegration and dissolution tests and, the results of the tests were compared to the specifications set by the SU. They were also compared to each other, enabling statistical determination of any significant difference across the batches through the use of comparative statistical analyses. Comparison of batches, at the development and validation stage, was done using the dissolution potential of the batches. These were performed through the use of statistical analyses. The RU made use of the similarity factor (F2) to compare the dissolution profiles. For the purpose of this research, the 1-Way analysis of variance was also used, which compared to the similarity factor, took in consideration the level of variance of the batches produced. Results and discussion: During the development stage amendments were made to produce a batch comparable to the innovator product. The amendments that led to the production of a comparable batch consisted of an extra 14 % of granulation fluid as well as 50 % of the disintegrant being added intra-granularly with the other 50 % added extra-granularly. The amendments were added on top of the amount suggested by the SU. This formulation was used and three batches produced consecutively. On comparison to the specifications set by the SU, the three batches were seen to be within the specifications. On comparison to each other, the dissolution profiles were seen to be different. Conclusion and recommendation: The development stage producing batches within the specifications set by the SU but also comparable with regards to its dissolution profile, was seen to be successful. The validation stage was seen to be unsuccessful. Even though the results of the critical parameters were within specifications, when compared to each other, the batches were seen to be significantly different. This led to the research looking at the TT as a whole as being unsuccessful. The researcher then determined what stage could be improved and how this could be done. The various stages seen as having associated problems were determined and ways to mitigate those were determined. A guideline in the form of a flow chart was proposed to aid a manufacturing facility undertaking a TT to shorten the period of time to completion as well as increase the chance of success.
- Full Text:
- Date Issued: 2013
The contribution of trees to local livelihoods in urban areas
- Authors: Kaoma, Humphrey
- Date: 2013
- Subjects: Trees in cities - -South Africa , Urban ecology (Sociology) -- South Africa , Poverty -- South Africa , Urban forestry -- South Africa , Urban poor -- South Africa , Natural resources -- South Africa , Human-plant relationships -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4734 , http://hdl.handle.net/10962/d1003911 , Trees in cities - -South Africa , Urban ecology (Sociology) -- South Africa , Poverty -- South Africa , Urban forestry -- South Africa , Urban poor -- South Africa , Natural resources -- South Africa , Human-plant relationships -- South Africa
- Description: Trees in natural forests are widely known for their essential contribution to rural livelihoods in developing countries, providing both consumptive and non-consumptive products to rural inhabitants. These benefits are also obtained from trees in urban forests and used by urban households. In the past decades, the role of urban trees to urban livelihoods, municipalities, local and global environment has often been overlooked by researchers and development agencies, and hence are poorly documented, especially in Africa. In South Africa, the increase in urbanisation and urban poverty means many urban residents are expected to be dependent on trees and tree products from homesteads, neighbourhoods and edges of towns. There is however a paucity of literature on the potential of trees in sustaining livelihoods and poverty alleviation in urban areas. This study determined the magnitude and nature of the direct contribution of trees and tree products to local livelihoods in different urban residential areas (informal, Reconstruction and Development Programme (RDP), and township) in three South African towns (Tzaneen, Bela Bela and Zeerust) which cover a rainfall gradient from relatively higher (775 mm p.a.) to low (575 mm p.a.). The results showed that most (90%) households had an interest in planting and managing trees on homesteads, given the high proportion (71%) of residents who had planted trees on their homesteads. The abundance of trees followed the moisture gradient, with Tzaneen having a larger share (46.4%) of trees, followed by Bela Bela (27.5%) and Zeerust (26.1%). Larger plots in the informal residential area accounted for the larger proportion (42.8%) of trees on homesteads, followed by the township (32.9%) and RDP households being the least because they were recently established. Tree density was also higher in the high rainfall town but the pattern did not follow the moisture gradient between Bela Bela and Zeerust due to little rainfall difference. However, tree density across residential areas was similar to the proportion of trees on homesteads in residential areas. The most common tree species were alien, and mainly exotic fruit trees made up two-thirds of the trees encountered. Most households collected various products from urban trees, particularly fuelwood, from edges of towns. This was especially by households with lower cash income. However, fruits were collected from homesteads regardless of the wealth status. Tree products had a significant contribution to the total annual household income, with fuelwood alone contributing up to R5 663 per household per annum, equivalent to two-three month household cash income. Tree products added 20% to total household income, which represents the amount of money households save by collecting tree products for free. Therefore, trees within and around urban areas contribute significantly to livelihoods and reduce poverty in urban areas. There is need therefore to encourage urban residents to plant trees on homesteads and policy makers to come up with policies that promote sustainable harvesting of tree products from areas surrounding urban areas.
- Full Text:
- Date Issued: 2013
- Authors: Kaoma, Humphrey
- Date: 2013
- Subjects: Trees in cities - -South Africa , Urban ecology (Sociology) -- South Africa , Poverty -- South Africa , Urban forestry -- South Africa , Urban poor -- South Africa , Natural resources -- South Africa , Human-plant relationships -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4734 , http://hdl.handle.net/10962/d1003911 , Trees in cities - -South Africa , Urban ecology (Sociology) -- South Africa , Poverty -- South Africa , Urban forestry -- South Africa , Urban poor -- South Africa , Natural resources -- South Africa , Human-plant relationships -- South Africa
- Description: Trees in natural forests are widely known for their essential contribution to rural livelihoods in developing countries, providing both consumptive and non-consumptive products to rural inhabitants. These benefits are also obtained from trees in urban forests and used by urban households. In the past decades, the role of urban trees to urban livelihoods, municipalities, local and global environment has often been overlooked by researchers and development agencies, and hence are poorly documented, especially in Africa. In South Africa, the increase in urbanisation and urban poverty means many urban residents are expected to be dependent on trees and tree products from homesteads, neighbourhoods and edges of towns. There is however a paucity of literature on the potential of trees in sustaining livelihoods and poverty alleviation in urban areas. This study determined the magnitude and nature of the direct contribution of trees and tree products to local livelihoods in different urban residential areas (informal, Reconstruction and Development Programme (RDP), and township) in three South African towns (Tzaneen, Bela Bela and Zeerust) which cover a rainfall gradient from relatively higher (775 mm p.a.) to low (575 mm p.a.). The results showed that most (90%) households had an interest in planting and managing trees on homesteads, given the high proportion (71%) of residents who had planted trees on their homesteads. The abundance of trees followed the moisture gradient, with Tzaneen having a larger share (46.4%) of trees, followed by Bela Bela (27.5%) and Zeerust (26.1%). Larger plots in the informal residential area accounted for the larger proportion (42.8%) of trees on homesteads, followed by the township (32.9%) and RDP households being the least because they were recently established. Tree density was also higher in the high rainfall town but the pattern did not follow the moisture gradient between Bela Bela and Zeerust due to little rainfall difference. However, tree density across residential areas was similar to the proportion of trees on homesteads in residential areas. The most common tree species were alien, and mainly exotic fruit trees made up two-thirds of the trees encountered. Most households collected various products from urban trees, particularly fuelwood, from edges of towns. This was especially by households with lower cash income. However, fruits were collected from homesteads regardless of the wealth status. Tree products had a significant contribution to the total annual household income, with fuelwood alone contributing up to R5 663 per household per annum, equivalent to two-three month household cash income. Tree products added 20% to total household income, which represents the amount of money households save by collecting tree products for free. Therefore, trees within and around urban areas contribute significantly to livelihoods and reduce poverty in urban areas. There is need therefore to encourage urban residents to plant trees on homesteads and policy makers to come up with policies that promote sustainable harvesting of tree products from areas surrounding urban areas.
- Full Text:
- Date Issued: 2013
The development of platinum and palladium-selective polymeric materials
- Authors: Fayemi, Omolola Esther
- Date: 2013 , 2013-05-03
- Subjects: Polymers , Platinum , Palladium , Adsorption , Sorbents , Nanofibers , Amines , Nanoparticles
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4287 , http://hdl.handle.net/10962/d1002964 , Polymers , Platinum , Palladium , Adsorption , Sorbents , Nanofibers , Amines , Nanoparticles
- Description: The adsorption and separation of platinum(IV) and palladium(II) chlorido species (PtCl₆²⁻ and PdCl₄²⁻) on polystyrene-based beads and nanofibers as well as silica microparticles functionalized with polyamine centres derived from ethylenediamine (EDA), diethylenetriamine (DETA), triethylenetriamine (TETA) and tris-(2-aminoethyl)amine (TAEA) is described. The functionalized sorbent materials were characterized by using microanalysis, SEM, XPS, BET and FTIR. The nanofiber sorbent material functionalized with ethylenediamine (F-EDA) had the highest loading capacity which was attributed to its high nitrogen content (10.83%) and larger surface area (241.3m²/g). The adsorption and loading capacities of the sorption materials were investigated using both the batch and column studies in 1 M HCI. The adsorption studies for both PtCl₆²⁻ and PdCl₄²⁻ on the polystyrene-based sorbent materials fit the Langmuir isotherm while the silica-based sorbents fitted the Freundlich isotherm with R² values > 0.99. In the column experiment the highest loading capacity of Pt and Pd were 7.4 mg/g and 4.3 mg/g respectively on the nanofiber sorbent material based on ethylenediamine (EDA). The polystyrene and silica-based resins with triethylenetetramine (TETA) functionality (M-TETA and S-TETA) showed selectivity for platinum and palladium, respectively. Metal chlorido complexes loaded on the sorbent materials were recovered by using 3% m/v thiourea solution as teh eluting agent with quantitative desorption efficiency under the selected experimental conditions. The separation of platinum from palladium was partially achieved by selective stripping of PtCl₆²⁻ with 0.5 M of NaClO₄ in 1.0 M HCI with PdCl₄²⁻ was eluted with 0.5 M thiourea in 1.0 M HCI. The selectivity of the M-TETA and S-TETA sorbent materials was proved by column separation of platinum(IV) and palladium(II), respectively, from synthetic solutions containing iridium(IV) and rhodium(III). The loading capacity for platinum on M-TETA was 0.09 mg/g while it was 0.27 mg/g for palladium on S-TETA. , Acrobat PDFMaker 10.1 for Word , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Date Issued: 2013
- Authors: Fayemi, Omolola Esther
- Date: 2013 , 2013-05-03
- Subjects: Polymers , Platinum , Palladium , Adsorption , Sorbents , Nanofibers , Amines , Nanoparticles
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4287 , http://hdl.handle.net/10962/d1002964 , Polymers , Platinum , Palladium , Adsorption , Sorbents , Nanofibers , Amines , Nanoparticles
- Description: The adsorption and separation of platinum(IV) and palladium(II) chlorido species (PtCl₆²⁻ and PdCl₄²⁻) on polystyrene-based beads and nanofibers as well as silica microparticles functionalized with polyamine centres derived from ethylenediamine (EDA), diethylenetriamine (DETA), triethylenetriamine (TETA) and tris-(2-aminoethyl)amine (TAEA) is described. The functionalized sorbent materials were characterized by using microanalysis, SEM, XPS, BET and FTIR. The nanofiber sorbent material functionalized with ethylenediamine (F-EDA) had the highest loading capacity which was attributed to its high nitrogen content (10.83%) and larger surface area (241.3m²/g). The adsorption and loading capacities of the sorption materials were investigated using both the batch and column studies in 1 M HCI. The adsorption studies for both PtCl₆²⁻ and PdCl₄²⁻ on the polystyrene-based sorbent materials fit the Langmuir isotherm while the silica-based sorbents fitted the Freundlich isotherm with R² values > 0.99. In the column experiment the highest loading capacity of Pt and Pd were 7.4 mg/g and 4.3 mg/g respectively on the nanofiber sorbent material based on ethylenediamine (EDA). The polystyrene and silica-based resins with triethylenetetramine (TETA) functionality (M-TETA and S-TETA) showed selectivity for platinum and palladium, respectively. Metal chlorido complexes loaded on the sorbent materials were recovered by using 3% m/v thiourea solution as teh eluting agent with quantitative desorption efficiency under the selected experimental conditions. The separation of platinum from palladium was partially achieved by selective stripping of PtCl₆²⁻ with 0.5 M of NaClO₄ in 1.0 M HCI with PdCl₄²⁻ was eluted with 0.5 M thiourea in 1.0 M HCI. The selectivity of the M-TETA and S-TETA sorbent materials was proved by column separation of platinum(IV) and palladium(II), respectively, from synthetic solutions containing iridium(IV) and rhodium(III). The loading capacity for platinum on M-TETA was 0.09 mg/g while it was 0.27 mg/g for palladium on S-TETA. , Acrobat PDFMaker 10.1 for Word , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Date Issued: 2013
The diet of the Subantarctic (A. Tropicalis) and Antarctic (A. Gazella) Fur seal at Marion Island
- Mgibantaka, Nonkoliso Felicia
- Authors: Mgibantaka, Nonkoliso Felicia
- Date: 2013
- Subjects: Southern fur seals -- Feeding and feeds -- Antarctica , Seals (Animals) -- Antarctica , Marine ecology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10729 , http://hdl.handle.net/10948/d1021104
- Description: Studying the diet of marine top predators is important for understanding the trophic ecology of the predators but also the distribution, abundance and seasonal variation of prey species. Dietary studies on subantarctic fur seals (Arctocephalus tropicalis) and Antarctic fur seals (A. gazella) is important for assessing their role as predators in the Southern Ocean. Seven hundred and sixty four scats were collected from an A. tropicalis colony at Cape Davis while 659 scats were collected from an A. gazella colony at Watertunnel stream from April 2006 to March 2010. Hard remains such as fish otoliths and cephalopod beaks were used for identification and quantification of prey. A. tropicalis diet comprised of three animal groups (fish, cephalopod and crustaceans) while A. gazella diet was made up of four animal groups (fish, cephalopods, crustaceans and seabirds). Fish contributed substantially more than other prey items in the diet of both fur seal species over the study period. Both species fed predominantly on fish of the family Myctophidae which constituted a numerical abundance of 98.9 percent in scats for both species combined. A. tropicalis fed on fish prey species from eight families, namely: Myctophidae, Notosudidae, Paralepididae, Nototheniidae, Bathylagidae, Chlorophthalmidae, Sternoptychidae and Photichthyidae while A. gazella fed on fish from six of these families, with Chlorophthalmidae and Photichthyidae not represented in its diet. Cephalopods and crustaceans were found in low numbers in the diet of both seal species and seabird remains were only found in the diet of A. gazella. Numerically, the most dominant species were from the genus Gymnoscopelus followed by Protomyctophum and then Electrona. In the diet of A. tropicalis, Gymnoscopelus contributed 66 percent, Protomyctophum 18 percent and Electrona 5.9 percent while in the diet of A. gazella Gymnoscopelus, Protomyctophum and Electrona contributed 59.43 percent, 20.24 percent and 14.24 percent respectively. Gymnoscopelus species comprised G. piabilis, G. bolini, G. braueri, G. fraseri, and G. nicholsi; Protomyctophum comprised Protomyctophum bolini, P. choriodon and P. tenisoni while Electrona comprised Electrona antarctica, E. carlsbergi and E. subaspera. Gymnoscopelus piabilis was the most dominant species from this genus while Electrona carlsbergi and Protomyctophum tenisoni dominated the genus Electrona and Protomyctophum respectively. The total number of fish species utilised by A. tropicalis was twenty four while twenty three fish species were identified in A. gazella diet. Bathysauropsis gracilis only featured in the diet of A. tropicalis while Lampanyctus ater and Lepidonotothen larseni were only found in the diet of A. gazella. To compare the diet of the seal species between seasons, a year was divided into three seasons, early summer, late summer and winter. Their diet was also compared between years from 2006 to 2010. Myctophid fish species showed substantial seasonal and annual fluctuations in the diet of the two fur seal species. E. carlsbergi, G. nicholsi and G. piabilis increased in numerical abundance in winter while Melectrona ventralis increased in late summer. The numerical abundance of G. fraseri and P. tenisoni increased in early summer. Generally, the two fur seal species fed on the same prey species. However, there was a significant difference when the diet of both fur seals was compared seasonally. There was no significant difference when the diet of A. gazella was compared annually, although such a difference was apparent for A. tropicalis.
- Full Text:
- Date Issued: 2013
- Authors: Mgibantaka, Nonkoliso Felicia
- Date: 2013
- Subjects: Southern fur seals -- Feeding and feeds -- Antarctica , Seals (Animals) -- Antarctica , Marine ecology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10729 , http://hdl.handle.net/10948/d1021104
- Description: Studying the diet of marine top predators is important for understanding the trophic ecology of the predators but also the distribution, abundance and seasonal variation of prey species. Dietary studies on subantarctic fur seals (Arctocephalus tropicalis) and Antarctic fur seals (A. gazella) is important for assessing their role as predators in the Southern Ocean. Seven hundred and sixty four scats were collected from an A. tropicalis colony at Cape Davis while 659 scats were collected from an A. gazella colony at Watertunnel stream from April 2006 to March 2010. Hard remains such as fish otoliths and cephalopod beaks were used for identification and quantification of prey. A. tropicalis diet comprised of three animal groups (fish, cephalopod and crustaceans) while A. gazella diet was made up of four animal groups (fish, cephalopods, crustaceans and seabirds). Fish contributed substantially more than other prey items in the diet of both fur seal species over the study period. Both species fed predominantly on fish of the family Myctophidae which constituted a numerical abundance of 98.9 percent in scats for both species combined. A. tropicalis fed on fish prey species from eight families, namely: Myctophidae, Notosudidae, Paralepididae, Nototheniidae, Bathylagidae, Chlorophthalmidae, Sternoptychidae and Photichthyidae while A. gazella fed on fish from six of these families, with Chlorophthalmidae and Photichthyidae not represented in its diet. Cephalopods and crustaceans were found in low numbers in the diet of both seal species and seabird remains were only found in the diet of A. gazella. Numerically, the most dominant species were from the genus Gymnoscopelus followed by Protomyctophum and then Electrona. In the diet of A. tropicalis, Gymnoscopelus contributed 66 percent, Protomyctophum 18 percent and Electrona 5.9 percent while in the diet of A. gazella Gymnoscopelus, Protomyctophum and Electrona contributed 59.43 percent, 20.24 percent and 14.24 percent respectively. Gymnoscopelus species comprised G. piabilis, G. bolini, G. braueri, G. fraseri, and G. nicholsi; Protomyctophum comprised Protomyctophum bolini, P. choriodon and P. tenisoni while Electrona comprised Electrona antarctica, E. carlsbergi and E. subaspera. Gymnoscopelus piabilis was the most dominant species from this genus while Electrona carlsbergi and Protomyctophum tenisoni dominated the genus Electrona and Protomyctophum respectively. The total number of fish species utilised by A. tropicalis was twenty four while twenty three fish species were identified in A. gazella diet. Bathysauropsis gracilis only featured in the diet of A. tropicalis while Lampanyctus ater and Lepidonotothen larseni were only found in the diet of A. gazella. To compare the diet of the seal species between seasons, a year was divided into three seasons, early summer, late summer and winter. Their diet was also compared between years from 2006 to 2010. Myctophid fish species showed substantial seasonal and annual fluctuations in the diet of the two fur seal species. E. carlsbergi, G. nicholsi and G. piabilis increased in numerical abundance in winter while Melectrona ventralis increased in late summer. The numerical abundance of G. fraseri and P. tenisoni increased in early summer. Generally, the two fur seal species fed on the same prey species. However, there was a significant difference when the diet of both fur seals was compared seasonally. There was no significant difference when the diet of A. gazella was compared annually, although such a difference was apparent for A. tropicalis.
- Full Text:
- Date Issued: 2013
The diversity and distribution patterns of intertidal fish in the Agulhas bioregion
- Authors: Roux, Maryanne
- Date: 2013
- Subjects: Intertidal fishes , Marine fishes -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10723 , http://hdl.handle.net/10948/d1019712
- Description: This study aimed to expand the existing knowledge on the diversity and distribution patterns of intertidal fishes in the Sardinia Bay MPA and adjacent open access areas. It focussed particularly on in intertidal fish communities along the Agulhas Bioregion coast which has been understudied, especially in recent years. Typical resident species belonging to the family Clinidae were the most abundant, conforming to previous studies. Species from the family Gobiidae were the second most abundant in this study but this family was not previously recorded as being abundant. Transient species were unimportant in the current study which is in contrast to previous studies in the region and suggests a change in species composition. Certain transient species utilised intertidal rockpools as part of their nursery areas in the Eastern Cape, as has previously been found around Algoa Bay. A decrease in species richness from east to west was recorded in this study which has been noted by previous authors and the diversity and distribution patterns of the intertidal fish in the current study conformed to patterns found previously. The position of the biogeographic boundary between the Agulhas and Natal Bioregions could not be confirmed but Wavecrest (along the Transkei coastline) appeared to be part of a transition zone rather than a fixed break. More sampling around this area is recommended to determine the location and understand the dynamic nature of this boundary. The fish species were found to be vertically distributed across the shore with most of the resident species being more abundant across the low shore while the transient species were more abundant in the middle to low shore pools. This vertical distribution has been found at many sites around the world. The volume of the pools proved to be the primary controlling factor while the effect of temperature on vertical distribution could not be demonstrated. The benefits of the Sardinia Bay Marine Protected Area on this unexploited community of fishes could not be demonstrated but the long term benefit of protection has yet to be shown. Results from this study suggest that despite the correspondence with general biogeographic trends, the intertidal fish community has changed in composition (at least in terms of transient species) during the last 30 years and the cause for these changes may in part be reduced recruitment from exploited linefish.
- Full Text:
- Date Issued: 2013
- Authors: Roux, Maryanne
- Date: 2013
- Subjects: Intertidal fishes , Marine fishes -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10723 , http://hdl.handle.net/10948/d1019712
- Description: This study aimed to expand the existing knowledge on the diversity and distribution patterns of intertidal fishes in the Sardinia Bay MPA and adjacent open access areas. It focussed particularly on in intertidal fish communities along the Agulhas Bioregion coast which has been understudied, especially in recent years. Typical resident species belonging to the family Clinidae were the most abundant, conforming to previous studies. Species from the family Gobiidae were the second most abundant in this study but this family was not previously recorded as being abundant. Transient species were unimportant in the current study which is in contrast to previous studies in the region and suggests a change in species composition. Certain transient species utilised intertidal rockpools as part of their nursery areas in the Eastern Cape, as has previously been found around Algoa Bay. A decrease in species richness from east to west was recorded in this study which has been noted by previous authors and the diversity and distribution patterns of the intertidal fish in the current study conformed to patterns found previously. The position of the biogeographic boundary between the Agulhas and Natal Bioregions could not be confirmed but Wavecrest (along the Transkei coastline) appeared to be part of a transition zone rather than a fixed break. More sampling around this area is recommended to determine the location and understand the dynamic nature of this boundary. The fish species were found to be vertically distributed across the shore with most of the resident species being more abundant across the low shore while the transient species were more abundant in the middle to low shore pools. This vertical distribution has been found at many sites around the world. The volume of the pools proved to be the primary controlling factor while the effect of temperature on vertical distribution could not be demonstrated. The benefits of the Sardinia Bay Marine Protected Area on this unexploited community of fishes could not be demonstrated but the long term benefit of protection has yet to be shown. Results from this study suggest that despite the correspondence with general biogeographic trends, the intertidal fish community has changed in composition (at least in terms of transient species) during the last 30 years and the cause for these changes may in part be reduced recruitment from exploited linefish.
- Full Text:
- Date Issued: 2013
The Drakensberg rock-jumper: ecology and genetic status of isolated montane populations
- Authors: Morris, Dale Brett
- Date: 2013
- Subjects: Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5828 , http://hdl.handle.net/10962/d1007696 , Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Description: The Drakensberg rock-jumper (Chaetops aurantius) is a high-altitude passerine endemic to South Africa and Lesotho, living along a highly disrupted portion of the southern Great Escarpment from the Drakensberg highlands in the north-east to the Sneeuberg in the west, above an altitude of 1500 m. Along with the Cape rock-jumper (C. frenatus), this genus provides one of the stronger faunal links between the floristic biomes known as the Drakensberg Alpine Centre (DAC) and the Cape Floristic Region (CFR). Despite this, there is a significant lack of information regarding the species. The great majority of information is based on incidental observation, and no dedicated study has been undertaken. I conducted a series of field excursions between January 2011 and November 2012 in order to explore the rock-jumper’s feeding ecology, diet, habitat usage and genetic diversity. By trapping the birds, I was able to mark them individually with unique colour ring-combinations, and pluck a tail feather for genetic analyses. Observational data reveal that birds living close to their lower altitude threshold (c. 1500 m) are strongly habitat specific, living in boulder fields dominated by grassy vegetation. However, in areas at higher elevations (c. 2000 – 2500 m) this restriction seemed to fall away, possibly as a result of farming practices in those areas – higher grazing pressure results in shorter grass and less foraging effort for the birds. They live in groups ranging from pairs to small family groups of up to twelve individuals and maintain year round territories. Territory defence takes the form of calling and displaying from a prominent rock or boulder and becomes particularly noticeable just prior to, and during, the breeding period. No colour ringed individuals were ever spotted in boulder fields outside from where they had been initially ringed. This, coupled with the behaviour of territory maintenance, suggests a strongly sedentary lifestyle. Genetic inferences are constrained by a small sample size (only 25 birds were caught), but results indicate that some genetic isolation is occurring – a single haplotype was exhibited in birds from across the southern Escarpment, while seven private haplotypes show that any genetic mixing is likely to be historical rather than current. Historical gene flow would most probably have occurred during the last glacial maximum (18 000 years before present), when the cooler, drier conditions which are currently restricted to high peaks would have been much more extensive, thereby decreasing the distance required for effective dispersal. This is in agreement with the observation results, concluding that although there has been movement of birds across the southern Escarpment in the past, it does not appear to be occurring currently. However, this does leave plenty of scope for further work, particularly in the genetic diversity of the species, and in expanding the ecological observations to include the breeding biology.
- Full Text:
- Date Issued: 2013
- Authors: Morris, Dale Brett
- Date: 2013
- Subjects: Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5828 , http://hdl.handle.net/10962/d1007696 , Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Description: The Drakensberg rock-jumper (Chaetops aurantius) is a high-altitude passerine endemic to South Africa and Lesotho, living along a highly disrupted portion of the southern Great Escarpment from the Drakensberg highlands in the north-east to the Sneeuberg in the west, above an altitude of 1500 m. Along with the Cape rock-jumper (C. frenatus), this genus provides one of the stronger faunal links between the floristic biomes known as the Drakensberg Alpine Centre (DAC) and the Cape Floristic Region (CFR). Despite this, there is a significant lack of information regarding the species. The great majority of information is based on incidental observation, and no dedicated study has been undertaken. I conducted a series of field excursions between January 2011 and November 2012 in order to explore the rock-jumper’s feeding ecology, diet, habitat usage and genetic diversity. By trapping the birds, I was able to mark them individually with unique colour ring-combinations, and pluck a tail feather for genetic analyses. Observational data reveal that birds living close to their lower altitude threshold (c. 1500 m) are strongly habitat specific, living in boulder fields dominated by grassy vegetation. However, in areas at higher elevations (c. 2000 – 2500 m) this restriction seemed to fall away, possibly as a result of farming practices in those areas – higher grazing pressure results in shorter grass and less foraging effort for the birds. They live in groups ranging from pairs to small family groups of up to twelve individuals and maintain year round territories. Territory defence takes the form of calling and displaying from a prominent rock or boulder and becomes particularly noticeable just prior to, and during, the breeding period. No colour ringed individuals were ever spotted in boulder fields outside from where they had been initially ringed. This, coupled with the behaviour of territory maintenance, suggests a strongly sedentary lifestyle. Genetic inferences are constrained by a small sample size (only 25 birds were caught), but results indicate that some genetic isolation is occurring – a single haplotype was exhibited in birds from across the southern Escarpment, while seven private haplotypes show that any genetic mixing is likely to be historical rather than current. Historical gene flow would most probably have occurred during the last glacial maximum (18 000 years before present), when the cooler, drier conditions which are currently restricted to high peaks would have been much more extensive, thereby decreasing the distance required for effective dispersal. This is in agreement with the observation results, concluding that although there has been movement of birds across the southern Escarpment in the past, it does not appear to be occurring currently. However, this does leave plenty of scope for further work, particularly in the genetic diversity of the species, and in expanding the ecological observations to include the breeding biology.
- Full Text:
- Date Issued: 2013
The effect of in vitro digestion on selected biological activities of Hypoxis sobolifera corms
- Authors: Van Rooyen, Anzel
- Date: 2013
- Subjects: Potatoes -- Therapeutic use , Medicinal plants
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10344 , http://hdl.handle.net/10948/d1020058
- Description: In South Africa part of the cultural and religious beliefs of the African people is the use of traditional remedies to treat diseases. These remedies are obtained from medicinal plants (Steenkamp, 2003). One of the most frequently traded plants in the Eastern Cape is Hypoxis, commonly known as Afrika patat, or African potato. South African traditional healers instruct patients to brew the fresh Hypoxis corm as a tea and then ingest it (Steenkamp, 2006a). This prompted an investigation into the digestive stability of a traditionally prepared Hypoxis extract. The H. sobolifera extracts were digested using a simulated gastric/small intestinal digestion and their biological activity determined. The hot water H. sobolifera extract before digestion only showed cytotoxic activity against cancer cell lines at very high concentrations which are not likely to be achieved under normal ingestion circumstances. In Chang liver cells on the other hand, chronic exposure to the hot water H. sobolifera extract increased glucose uptake in amounts similar to that of metformin. On the negative side, the glucose utilization stimulation was lost due to the simulated digestion process. The significant inhibition of AGEs by hot water H. sobolifera extract (IC50 of 6.3 Ig/ml) is a very encouraging result as treatment in the management of diabetes. This activity was only slightly reduced by the in vitro digestion process. Also observed was enzyme inhibition activity by traditionally prepared H. sobolifera, with ∝-amylase being inhibited (IC50 of approximately 250 Ig/ml) and therefore preventing or limiting starch breakdown. From the DPPH results it was clear that H. sobolifera, even when digested, is a potent anti-oxidant (IC50 of 134.4 Ig/ml when undigested compared to 162.9 when digested with β-glucosidase added to stomach digestive step). HPLC and TLC experiments revealed that rooperol which has previously been thought to be the compound responsible for the anti-oxidant activity in Hypoxis extracts, was absent from the traditional extract of H. sobolifera and therefore cannot be the sole compound exhibiting anti-oxidant activity; other compounds such as phenolics may be contributing. The phenolic and flavonoid content results revealed very highconcentrations of these compounds in the traditionally prepared H. sobolifera extract. These compounds may therefore play major roles in all of the biological activities observed from treatment with Hypoxis spp. The ROS results yielded interesting and promising results. Using standard or traditionally prepared H. sobolifera extracts, activation of differentiated U937 cells with PMA was greatly enhanced by cotreatment with the extracts, while extracts on their own did not cause significant activation. Future studies should investigate this property of the extracts as a promising immune boosterThe HPLC results showed that hypoxoside was undetectable in the hot water traditional extract and the TLC anti-oxidant experiment proved that rooperol is not present in the hot water traditional extract after treatment with β-glucosidase. This indicates that neither one of the Hypoxis compounds previously believed to be responsible for the biological activities observed are present in the extract when prepared the traditional way. Therefore, the biological activities observed in this study can be attributed to other phytochemical compounds.
- Full Text:
- Date Issued: 2013
- Authors: Van Rooyen, Anzel
- Date: 2013
- Subjects: Potatoes -- Therapeutic use , Medicinal plants
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10344 , http://hdl.handle.net/10948/d1020058
- Description: In South Africa part of the cultural and religious beliefs of the African people is the use of traditional remedies to treat diseases. These remedies are obtained from medicinal plants (Steenkamp, 2003). One of the most frequently traded plants in the Eastern Cape is Hypoxis, commonly known as Afrika patat, or African potato. South African traditional healers instruct patients to brew the fresh Hypoxis corm as a tea and then ingest it (Steenkamp, 2006a). This prompted an investigation into the digestive stability of a traditionally prepared Hypoxis extract. The H. sobolifera extracts were digested using a simulated gastric/small intestinal digestion and their biological activity determined. The hot water H. sobolifera extract before digestion only showed cytotoxic activity against cancer cell lines at very high concentrations which are not likely to be achieved under normal ingestion circumstances. In Chang liver cells on the other hand, chronic exposure to the hot water H. sobolifera extract increased glucose uptake in amounts similar to that of metformin. On the negative side, the glucose utilization stimulation was lost due to the simulated digestion process. The significant inhibition of AGEs by hot water H. sobolifera extract (IC50 of 6.3 Ig/ml) is a very encouraging result as treatment in the management of diabetes. This activity was only slightly reduced by the in vitro digestion process. Also observed was enzyme inhibition activity by traditionally prepared H. sobolifera, with ∝-amylase being inhibited (IC50 of approximately 250 Ig/ml) and therefore preventing or limiting starch breakdown. From the DPPH results it was clear that H. sobolifera, even when digested, is a potent anti-oxidant (IC50 of 134.4 Ig/ml when undigested compared to 162.9 when digested with β-glucosidase added to stomach digestive step). HPLC and TLC experiments revealed that rooperol which has previously been thought to be the compound responsible for the anti-oxidant activity in Hypoxis extracts, was absent from the traditional extract of H. sobolifera and therefore cannot be the sole compound exhibiting anti-oxidant activity; other compounds such as phenolics may be contributing. The phenolic and flavonoid content results revealed very highconcentrations of these compounds in the traditionally prepared H. sobolifera extract. These compounds may therefore play major roles in all of the biological activities observed from treatment with Hypoxis spp. The ROS results yielded interesting and promising results. Using standard or traditionally prepared H. sobolifera extracts, activation of differentiated U937 cells with PMA was greatly enhanced by cotreatment with the extracts, while extracts on their own did not cause significant activation. Future studies should investigate this property of the extracts as a promising immune boosterThe HPLC results showed that hypoxoside was undetectable in the hot water traditional extract and the TLC anti-oxidant experiment proved that rooperol is not present in the hot water traditional extract after treatment with β-glucosidase. This indicates that neither one of the Hypoxis compounds previously believed to be responsible for the biological activities observed are present in the extract when prepared the traditional way. Therefore, the biological activities observed in this study can be attributed to other phytochemical compounds.
- Full Text:
- Date Issued: 2013
The factors affecting self-regulation through the analysis of physiological, psychological and behavioural measures during task-switching
- Authors: Chaplin, Caley
- Date: 2013 , 2013-07-16
- Subjects: Human multitasking -- Physiological aspects , Human multitasking -- Psychological aspects , Fatigue , Boredom , Attention , Mental fatigue , Human information processing , Decision making , Labor productivity , Industrial hygiene , Employees -- Workload
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5135 , http://hdl.handle.net/10962/d1006027 , Human multitasking -- Physiological aspects , Human multitasking -- Psychological aspects , Fatigue , Boredom , Attention , Mental fatigue , Human information processing , Decision making , Labor productivity , Industrial hygiene , Employees -- Workload
- Description: Individuals are required to manage multiple tasks which require strategic allocation of time and effort to ensure goals are reached efficiently. By providing the worker with autonomy over their work, performance and worker well-being have improved. This increased control allows individuals to organize work according to the needs of the body, which prevents fatigue leading to improved productivity. When given the option, humans tend to switch between tasks frequently. This behaviour can be used to determine the change in self-regulation strategies. An understanding of human task-switching behaviour is important for the design of job rotation systems. However, there is a lack of evidence explaining the factors motivating the need to switch between tasks. This study aims to use physiological, subjective and behavioural measures to explain the factors influencing selfregulation through the act of task-switching. Three primary hypotheses were developed to explain the factors underlying taskswitching behaviour. It was hypothesized that the degree of boredom experienced, the effort required to perform the task and the resource usage induced by the task are factors responsible in deciding task switching behaviour. Participants (17 males and 17 females) switched freely between five different information-processing tasks for the 45 minutes. Participants were allowed to switch back and forth between tasks and did not have to conduct all five tasks. The following measures were recorded during the experiment: subjective measures of boredom, mental effort, task frustration and perceived performance of the tasks; energy consumption and physiological measures of effort (HR, HRV and body temperature) and behavioural measures, including duration and frequency of task. Perceived boredom was found to differ among the tasks and before and after the experiment. The average boredom rating at each task transition for all tasks exceeded a score of 2.5 out of a possible 4. There were no significant changes in physiological measures between the beginning and end of the task trials. However, changes in physiological measures showed a decrease in effort investment following task transition. Heart rate variability was lower for externally-paced tasks than for self-paced tasks, despite the differences in cognitive demands. The most frequent task-switch combination occurred between tasks of high and low cognitive demand. The least frequent task-switching combination occurred between tasks of similar characteristics, which produced no differences in physiological responses. Task-switching behaviour was influenced by the degree of boredom, and therefore more time was spent on less monotonous tasks. The level of physiological effort required for the task affected task-switching behaviour. Task switches were made before any changes in effort took place in an attempt to maintain task efficiency. It appears plausible that a task switch was made to reduce effort investment and activation levels. The type of information processing resources used by different tasks affected the task-switching combinations. Individuals tended to switch between tasks of differing resources so that those in limited supply were able to replenish. Therefore the findings from this study can potentially be used to improve the design of job rotation systems. Such improvements may enhance productivity and worker well-being by inhibiting the onset of down regulation and fatigue processes. This study showed that autonomy is necessary for individuals to regulate behaviour to suit human needs. , Microsoft� Office Word 2007 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Date Issued: 2013
- Authors: Chaplin, Caley
- Date: 2013 , 2013-07-16
- Subjects: Human multitasking -- Physiological aspects , Human multitasking -- Psychological aspects , Fatigue , Boredom , Attention , Mental fatigue , Human information processing , Decision making , Labor productivity , Industrial hygiene , Employees -- Workload
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5135 , http://hdl.handle.net/10962/d1006027 , Human multitasking -- Physiological aspects , Human multitasking -- Psychological aspects , Fatigue , Boredom , Attention , Mental fatigue , Human information processing , Decision making , Labor productivity , Industrial hygiene , Employees -- Workload
- Description: Individuals are required to manage multiple tasks which require strategic allocation of time and effort to ensure goals are reached efficiently. By providing the worker with autonomy over their work, performance and worker well-being have improved. This increased control allows individuals to organize work according to the needs of the body, which prevents fatigue leading to improved productivity. When given the option, humans tend to switch between tasks frequently. This behaviour can be used to determine the change in self-regulation strategies. An understanding of human task-switching behaviour is important for the design of job rotation systems. However, there is a lack of evidence explaining the factors motivating the need to switch between tasks. This study aims to use physiological, subjective and behavioural measures to explain the factors influencing selfregulation through the act of task-switching. Three primary hypotheses were developed to explain the factors underlying taskswitching behaviour. It was hypothesized that the degree of boredom experienced, the effort required to perform the task and the resource usage induced by the task are factors responsible in deciding task switching behaviour. Participants (17 males and 17 females) switched freely between five different information-processing tasks for the 45 minutes. Participants were allowed to switch back and forth between tasks and did not have to conduct all five tasks. The following measures were recorded during the experiment: subjective measures of boredom, mental effort, task frustration and perceived performance of the tasks; energy consumption and physiological measures of effort (HR, HRV and body temperature) and behavioural measures, including duration and frequency of task. Perceived boredom was found to differ among the tasks and before and after the experiment. The average boredom rating at each task transition for all tasks exceeded a score of 2.5 out of a possible 4. There were no significant changes in physiological measures between the beginning and end of the task trials. However, changes in physiological measures showed a decrease in effort investment following task transition. Heart rate variability was lower for externally-paced tasks than for self-paced tasks, despite the differences in cognitive demands. The most frequent task-switch combination occurred between tasks of high and low cognitive demand. The least frequent task-switching combination occurred between tasks of similar characteristics, which produced no differences in physiological responses. Task-switching behaviour was influenced by the degree of boredom, and therefore more time was spent on less monotonous tasks. The level of physiological effort required for the task affected task-switching behaviour. Task switches were made before any changes in effort took place in an attempt to maintain task efficiency. It appears plausible that a task switch was made to reduce effort investment and activation levels. The type of information processing resources used by different tasks affected the task-switching combinations. Individuals tended to switch between tasks of differing resources so that those in limited supply were able to replenish. Therefore the findings from this study can potentially be used to improve the design of job rotation systems. Such improvements may enhance productivity and worker well-being by inhibiting the onset of down regulation and fatigue processes. This study showed that autonomy is necessary for individuals to regulate behaviour to suit human needs. , Microsoft� Office Word 2007 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Date Issued: 2013
The fitting of statistical distributions to wind data in coastal areas of South Africa
- Authors: Moodley, Kirshnee
- Date: 2013
- Subjects: Winds -- South Africa -- Port Elizabeth -- Speed -- Measurement , Wind power -- South Africa -- Port Elizabeth , Winds -- South Africa -- Port Elizabeth -- Measurement -- Mathematical models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10584
- Description: Coastal South African cities like Port Elizabeth are said to have a strong potential for wind energy. This study aims to model wind data in order to be able assess the power potential belonging to a given site. The main challenge in modelling wind direction data is that it is categorized as circular data and therefore requires special techniques for handling that are different from usual statistical samples. Statistical tools such as descriptive measures and distribution fitting, were re-invented for directional data by researchers in this field. The von Mises distribution is a predominant distribution in circular statistics and is commonly used to describe wind directions. In this study, the circular principles described by previous researchers were developed by using the statistical software, Mathematica. Graphical methods to present the wind data were developed to give an overview of the behaviour of the winds in any given area. Data collected at Coega, an area near Port Elizabeth, South Africa, was used to illustrate the models which were established in this study. Circular distributions were fit to the directional data in order to make appropriate conclusions about the prevailing wind directions in this area.
- Full Text:
- Date Issued: 2013
- Authors: Moodley, Kirshnee
- Date: 2013
- Subjects: Winds -- South Africa -- Port Elizabeth -- Speed -- Measurement , Wind power -- South Africa -- Port Elizabeth , Winds -- South Africa -- Port Elizabeth -- Measurement -- Mathematical models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10584
- Description: Coastal South African cities like Port Elizabeth are said to have a strong potential for wind energy. This study aims to model wind data in order to be able assess the power potential belonging to a given site. The main challenge in modelling wind direction data is that it is categorized as circular data and therefore requires special techniques for handling that are different from usual statistical samples. Statistical tools such as descriptive measures and distribution fitting, were re-invented for directional data by researchers in this field. The von Mises distribution is a predominant distribution in circular statistics and is commonly used to describe wind directions. In this study, the circular principles described by previous researchers were developed by using the statistical software, Mathematica. Graphical methods to present the wind data were developed to give an overview of the behaviour of the winds in any given area. Data collected at Coega, an area near Port Elizabeth, South Africa, was used to illustrate the models which were established in this study. Circular distributions were fit to the directional data in order to make appropriate conclusions about the prevailing wind directions in this area.
- Full Text:
- Date Issued: 2013
The impact of low to moderate alcohol consumption on different types of human performance
- Authors: Goble, David
- Date: 2013
- Subjects: Alcohol -- Physiological effect Temperance Human information processing -- Effect of drugs on Visual perception -- Effect of drugs on Cognition -- Effect of drugs on Caffeine -- Physiological effect
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5136 , http://hdl.handle.net/10962/d1006042
- Description: Despite extensive research into the effects of alcohol consumption, there is no clear understanding into the mechanisms underlying human information processing impairment. The acute consumption of alcohol was investigated to determine the implications for human information processing capabilities, and to identify the extent to which these implications were stage-specific. Further aims included the investigation and quantification of caffeine-induced antagonism of alcohol impairment. Moreover, the aforementioned relationships were investigated in morning versus evening conditions. A test battery of six resource-specific tasks was utilised to measure visual perceptual, cognitive and sensory-motor performance, fashioned to return both simple and complex measures of each task. The tasks implemented were: visual perceptual performance (accommodation, visual detection, visual pattern recognition); cognition (memory recall- digit span); and motor output (modified Fitts‟ and a driving simulated line-tracking). Performance measures were recorded by the respective computer based tasks. Physiological variables measured included heart rate frequency, heart rate variability (RMSSD, High and Low Frequency Power) and body temperature. Saccade speed, saccade amplitude, pupil size and fixation duration were the oculomotor parameters measured. Three groups of participants (alcohol, caffeine+alcohol and control) n=36 were studied, split evenly between sexes in a mixed repeated/non-repeated measures design. The control group performed all test batteries under no influence. The alcohol group performed test batteries one and two sober, and three and four under the influence of a 0.4 g/kg dose of alcohol. Group caffeine+alcohol conducted test battery one sober, two under the effect of caffeine only (4 mg/kg), and three and four under the influence of both caffeine and alcohol (0.4 g/kg). The third test battery demonstrated the effects of alcohol during the inclining phase of the blood alcohol curve, and the fourth represented the declining phase. Morning experimentation occurred between 10:00 - 12: 45 and 10:30 -13:15 with evening experimentation between 19:00 - 21:30 and 19:30 - 22:00. Acute alcohol consumption at a dose of approximately 0.4 g/kg body weight effected an average peak breath alcohol concentration of 0.062 % and 0.059 % for the alcohol and caffeine+alcohol groups respectively. Task-related visual perceptual performance demonstrated significant decrements for simple reaction time, choice reaction time and error rate. Cognitive performance demonstrated no significant performance decrements, while motor performance indicated significant decrements in target accuracy only. Physiological parameters in response to alcohol consumption showed significantly decreased heart rate variability (RMSSD) in the modified Fitts‟ task only. A significant decrease in saccade amplitude in the memory task was the only change in oculomotor parameters. Prior caffeine consumption demonstrated limited antagonism to task-related alcohol impairment, significantly improving performance only in reduced error rate while reading. Caffeine consumption showed stimulating effects on physiological parameters, significantly increasing heart rate and heart rate variability when compared to alcohol alone. The design of the tasks allows for comparison between complex and simple task performance, indicating resource utilisation and depletion. Complex tasks demonstrated higher resource utilisation, however with no statistical performance differences to simple tasks. Physiological parameters showed greater change in response to alcohol consumption, than did the performance measures. Alcohol consumption imposed significant changes in physiological and oculomotor parameters for cognitive tasks only, significantly increasing heart rate frequency and decreasing heart rate variability, skin temperature and saccade amplitude. Caffeine consumption showed no antagonism of alcohol-induced performance measures. Physiological measures showed that caffeine consumption imposed stimulating effects in only the neural reflex and memory tasks, significantly increasing heart rate frequency and heart rate variability. Prior caffeine consumption significantly decreased fixation duration in the memory task only. The time of day at which alcohol was consumed demonstrated significant performance and physiological implications. Results indicated that morning consumption of alcohol imposes greater decrements in performance and larger fluctuations in physiological parameters than the decrements in evening experimental sessions. It can be concluded that alcohol consumption at a dose of 0.4 g/kg affects all stages in the information processing chain. Task performance indicates that alcohol has a greater severity on the early stages of information processing. Conversely, under the influence of alcohol an increased task complexity induces greater effects on central stage information processing. In addition, caffeine consumption at a dose of 4 mg/kg prior to alcohol does not antagonise the alcohol-induced performance decrements.
- Full Text:
- Date Issued: 2013
- Authors: Goble, David
- Date: 2013
- Subjects: Alcohol -- Physiological effect Temperance Human information processing -- Effect of drugs on Visual perception -- Effect of drugs on Cognition -- Effect of drugs on Caffeine -- Physiological effect
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5136 , http://hdl.handle.net/10962/d1006042
- Description: Despite extensive research into the effects of alcohol consumption, there is no clear understanding into the mechanisms underlying human information processing impairment. The acute consumption of alcohol was investigated to determine the implications for human information processing capabilities, and to identify the extent to which these implications were stage-specific. Further aims included the investigation and quantification of caffeine-induced antagonism of alcohol impairment. Moreover, the aforementioned relationships were investigated in morning versus evening conditions. A test battery of six resource-specific tasks was utilised to measure visual perceptual, cognitive and sensory-motor performance, fashioned to return both simple and complex measures of each task. The tasks implemented were: visual perceptual performance (accommodation, visual detection, visual pattern recognition); cognition (memory recall- digit span); and motor output (modified Fitts‟ and a driving simulated line-tracking). Performance measures were recorded by the respective computer based tasks. Physiological variables measured included heart rate frequency, heart rate variability (RMSSD, High and Low Frequency Power) and body temperature. Saccade speed, saccade amplitude, pupil size and fixation duration were the oculomotor parameters measured. Three groups of participants (alcohol, caffeine+alcohol and control) n=36 were studied, split evenly between sexes in a mixed repeated/non-repeated measures design. The control group performed all test batteries under no influence. The alcohol group performed test batteries one and two sober, and three and four under the influence of a 0.4 g/kg dose of alcohol. Group caffeine+alcohol conducted test battery one sober, two under the effect of caffeine only (4 mg/kg), and three and four under the influence of both caffeine and alcohol (0.4 g/kg). The third test battery demonstrated the effects of alcohol during the inclining phase of the blood alcohol curve, and the fourth represented the declining phase. Morning experimentation occurred between 10:00 - 12: 45 and 10:30 -13:15 with evening experimentation between 19:00 - 21:30 and 19:30 - 22:00. Acute alcohol consumption at a dose of approximately 0.4 g/kg body weight effected an average peak breath alcohol concentration of 0.062 % and 0.059 % for the alcohol and caffeine+alcohol groups respectively. Task-related visual perceptual performance demonstrated significant decrements for simple reaction time, choice reaction time and error rate. Cognitive performance demonstrated no significant performance decrements, while motor performance indicated significant decrements in target accuracy only. Physiological parameters in response to alcohol consumption showed significantly decreased heart rate variability (RMSSD) in the modified Fitts‟ task only. A significant decrease in saccade amplitude in the memory task was the only change in oculomotor parameters. Prior caffeine consumption demonstrated limited antagonism to task-related alcohol impairment, significantly improving performance only in reduced error rate while reading. Caffeine consumption showed stimulating effects on physiological parameters, significantly increasing heart rate and heart rate variability when compared to alcohol alone. The design of the tasks allows for comparison between complex and simple task performance, indicating resource utilisation and depletion. Complex tasks demonstrated higher resource utilisation, however with no statistical performance differences to simple tasks. Physiological parameters showed greater change in response to alcohol consumption, than did the performance measures. Alcohol consumption imposed significant changes in physiological and oculomotor parameters for cognitive tasks only, significantly increasing heart rate frequency and decreasing heart rate variability, skin temperature and saccade amplitude. Caffeine consumption showed no antagonism of alcohol-induced performance measures. Physiological measures showed that caffeine consumption imposed stimulating effects in only the neural reflex and memory tasks, significantly increasing heart rate frequency and heart rate variability. Prior caffeine consumption significantly decreased fixation duration in the memory task only. The time of day at which alcohol was consumed demonstrated significant performance and physiological implications. Results indicated that morning consumption of alcohol imposes greater decrements in performance and larger fluctuations in physiological parameters than the decrements in evening experimental sessions. It can be concluded that alcohol consumption at a dose of 0.4 g/kg affects all stages in the information processing chain. Task performance indicates that alcohol has a greater severity on the early stages of information processing. Conversely, under the influence of alcohol an increased task complexity induces greater effects on central stage information processing. In addition, caffeine consumption at a dose of 4 mg/kg prior to alcohol does not antagonise the alcohol-induced performance decrements.
- Full Text:
- Date Issued: 2013
The influence of soccer-specific fatigue on the risk of thigh injuries in amateur black African players
- Authors: Jones, Robert Ian
- Date: 2013
- Subjects: Soccer injuries -- South Africa -- Eastern Cape Thigh -- Wounds and injuries -- South Africa -- Eastern Cape Hamstring muscle -- Wounds and injuries -- South Africa -- Eastern Cape Black people -- Wounds and injuries -- South Africa -- Eastern Cape Fatigue
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5100 , http://hdl.handle.net/10962/d1001841
- Description: Background: Epidemiological findings indicate a higher risk of muscular thigh strain injury during the latter stages of both halves of soccer match-play, with muscular fatigue highlighted as a key etiological factor in injury causation. Anthropometric, biomechanical and physiological differences present in the Black African population may elicit unique thigh injury risk profiles, different from those of European and American players. Objectives: The purpose of the current research was to investigate the impact of soccer-specific fatigue on the risk of hamstring and quadricep injury in amateur Black African soccer players, in both the dominant and non-dominant legs. Methods: Participants were required to perform a soccer matchplay simulation (SAFT⁹⁰), consisting of multidirectional and utility movements, as well as frequent acceleration and deceleration. Selected physical, physiological and psychophysical responses were collected at specific time intervals throughout fatigue protocol performance. Results: Heart rate responses were observed to increase significantly (p<0.05) in response to the start of both halves, and remain elevated (but showing no further significant increase) during the performance of the remainder of the fatigue protocol. Significant (p<0.05) changes in both concentric and eccentric isokinetic variables of the knee flexors and extensors highlight the effect of muscular fatigue on performance in soccer match-play. Eccentric hamstring peak torque was observed to decrease significantly over time (60°.s⁻ₑ=17.34%, 180°.s⁻ₑ=18.27%), with significant reductions observed during both halves. The functional H:Q ratio at 180°.s⁻ₑ indicated a significant decrease over time (10.04%), with a significant decrease indicated during the second half of the SAFT⁹⁰ protocol. The passive half time interval did not result in significant changes in isokinetic variables. Isokinetic strength, work and power indicated no significant effects of leg dominance.. ‘Central’ and ‘Local’ ratings of exertion were observed to increase significantly (p<0.05) as a function of exercise duration. Conclusion: The overall reduction in both the eccentric hamstring peak torque and the functional strength ratio was illustrated to be similar to that of other soccer-specific fatigue research. As a result, the risk of thigh strain injuries is suggested to be similar regardless of playing level and race. These time dependent changes may have implications for competitive performance and increased predisposition to hamstring strain injuries during the latter stages of both halves of match-play
- Full Text:
- Date Issued: 2013
- Authors: Jones, Robert Ian
- Date: 2013
- Subjects: Soccer injuries -- South Africa -- Eastern Cape Thigh -- Wounds and injuries -- South Africa -- Eastern Cape Hamstring muscle -- Wounds and injuries -- South Africa -- Eastern Cape Black people -- Wounds and injuries -- South Africa -- Eastern Cape Fatigue
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5100 , http://hdl.handle.net/10962/d1001841
- Description: Background: Epidemiological findings indicate a higher risk of muscular thigh strain injury during the latter stages of both halves of soccer match-play, with muscular fatigue highlighted as a key etiological factor in injury causation. Anthropometric, biomechanical and physiological differences present in the Black African population may elicit unique thigh injury risk profiles, different from those of European and American players. Objectives: The purpose of the current research was to investigate the impact of soccer-specific fatigue on the risk of hamstring and quadricep injury in amateur Black African soccer players, in both the dominant and non-dominant legs. Methods: Participants were required to perform a soccer matchplay simulation (SAFT⁹⁰), consisting of multidirectional and utility movements, as well as frequent acceleration and deceleration. Selected physical, physiological and psychophysical responses were collected at specific time intervals throughout fatigue protocol performance. Results: Heart rate responses were observed to increase significantly (p<0.05) in response to the start of both halves, and remain elevated (but showing no further significant increase) during the performance of the remainder of the fatigue protocol. Significant (p<0.05) changes in both concentric and eccentric isokinetic variables of the knee flexors and extensors highlight the effect of muscular fatigue on performance in soccer match-play. Eccentric hamstring peak torque was observed to decrease significantly over time (60°.s⁻ₑ=17.34%, 180°.s⁻ₑ=18.27%), with significant reductions observed during both halves. The functional H:Q ratio at 180°.s⁻ₑ indicated a significant decrease over time (10.04%), with a significant decrease indicated during the second half of the SAFT⁹⁰ protocol. The passive half time interval did not result in significant changes in isokinetic variables. Isokinetic strength, work and power indicated no significant effects of leg dominance.. ‘Central’ and ‘Local’ ratings of exertion were observed to increase significantly (p<0.05) as a function of exercise duration. Conclusion: The overall reduction in both the eccentric hamstring peak torque and the functional strength ratio was illustrated to be similar to that of other soccer-specific fatigue research. As a result, the risk of thigh strain injuries is suggested to be similar regardless of playing level and race. These time dependent changes may have implications for competitive performance and increased predisposition to hamstring strain injuries during the latter stages of both halves of match-play
- Full Text:
- Date Issued: 2013
The influence of soil properties on the growth and distribution of Portulacaria Afra in subtropical thicket, South Africa
- Authors: Becker, Carina Helene
- Date: 2013
- Subjects: Portulacaria afra -- South Africa , Plant conservation -- South Africa , Shrubs -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10753 , http://hdl.handle.net/10948/d1013046
- Description: Subtropical Thicket is the dominant vegetation biome in the Eastern Cape, and extends through to parts of the Western Cape. It is dominated by Portulacaria afra (spekboom), a woody succulent plant recognised for its importance as an ecosystem engineer and its carbon sequestration potential. Due to excessive grazing from domestic stock, spekboom has been completely removed from some areas. The Subtropical Thicket Restoration Programme (STRP) initiated a large scale restoration programme of planting spekboom cuttings in these degraded areas. Their efforts have been met with varying levels of success and improvement of the programme relies on continuous monitoring and scientific evaluation. I investigated the influence of selected soil properties on spekboom growth, mortality and landscape distribution, at both restoration sites and natural intact areas, and through experiments. Site or location was the most important factor influencing spekboom success at restoration plots, whereby sites in the eastern end of spekboom distribution perform better. Moving westwards slope orientation emerged as an important factor, whereby north facing slopes are preferred by spekboom. Although high levels of soil salinity (NaCl) restricted spekboom growth and affected its health, it could tolerate the levels it was exposed too. Soil pH, above 7, and phosphorous concentration, above 70 mg.kg-1, were the only limiting factors to spekboom survival found in the restoration sites. This preference for acidic soils was mirrored in intact Thicket. However in general, soil is not a major factor influencing spekboom growth and distribution, and spekboom is tolerant of a wide range of soil conditions. Spekbooms constraint is most likely a function of climate, which varies greatly across the biome. This study answered some vital questions regarding the possible influence of soil in spekboom growth and distribution. It disapproved the theory that a catena effect may be responsible for the lack of spekboom growing in bottomland areas. The study also indicates and supports the versatility of spekboom as a plant for restoring degraded lands across a range of different geologies and soil types. To maximise spekboom survival rates, restoration efforts should be focussed towards the eastern end of its distribution and to avoid planting in soils with pH levels higher than 7.
- Full Text:
- Date Issued: 2013
- Authors: Becker, Carina Helene
- Date: 2013
- Subjects: Portulacaria afra -- South Africa , Plant conservation -- South Africa , Shrubs -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10753 , http://hdl.handle.net/10948/d1013046
- Description: Subtropical Thicket is the dominant vegetation biome in the Eastern Cape, and extends through to parts of the Western Cape. It is dominated by Portulacaria afra (spekboom), a woody succulent plant recognised for its importance as an ecosystem engineer and its carbon sequestration potential. Due to excessive grazing from domestic stock, spekboom has been completely removed from some areas. The Subtropical Thicket Restoration Programme (STRP) initiated a large scale restoration programme of planting spekboom cuttings in these degraded areas. Their efforts have been met with varying levels of success and improvement of the programme relies on continuous monitoring and scientific evaluation. I investigated the influence of selected soil properties on spekboom growth, mortality and landscape distribution, at both restoration sites and natural intact areas, and through experiments. Site or location was the most important factor influencing spekboom success at restoration plots, whereby sites in the eastern end of spekboom distribution perform better. Moving westwards slope orientation emerged as an important factor, whereby north facing slopes are preferred by spekboom. Although high levels of soil salinity (NaCl) restricted spekboom growth and affected its health, it could tolerate the levels it was exposed too. Soil pH, above 7, and phosphorous concentration, above 70 mg.kg-1, were the only limiting factors to spekboom survival found in the restoration sites. This preference for acidic soils was mirrored in intact Thicket. However in general, soil is not a major factor influencing spekboom growth and distribution, and spekboom is tolerant of a wide range of soil conditions. Spekbooms constraint is most likely a function of climate, which varies greatly across the biome. This study answered some vital questions regarding the possible influence of soil in spekboom growth and distribution. It disapproved the theory that a catena effect may be responsible for the lack of spekboom growing in bottomland areas. The study also indicates and supports the versatility of spekboom as a plant for restoring degraded lands across a range of different geologies and soil types. To maximise spekboom survival rates, restoration efforts should be focussed towards the eastern end of its distribution and to avoid planting in soils with pH levels higher than 7.
- Full Text:
- Date Issued: 2013
The isolation and characterisation of secondary metabolites from selected South African marine red algae (Rhodophyta)
- Authors: Fakee, Jameel
- Date: 2013
- Subjects: Metabolites Marine algae -- South Africa Marine algae -- Therapeutic use Metabolites -- Therapeutic use Marine metabolites Plocamocera Red algae Laurencia Delisea flaccida
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3733 , http://hdl.handle.net/10962/d1001472
- Description: Secondary metabolites from natural sources are fast growing as popular drug leads. The structural novelty and favourable biological activity that these compounds display contribute to their popularity as drugs of the future. Examples of such compounds include the potent anticancer drug paclitaxel isolated from the bark of a yew tree as well as the more commonly known analgesic aspirin which stems from the bark of the willow tree. The biological activities exhibited by these secondary metabolites are vast and range from antimicrobial to anticancer activity to mention but a few. As a result, the isolation of novel compounds from natural sources is on the rise. The South African seaboard is home to a wealth of various marine algal species which produce fascinating secondary metabolites. For example, Portierria hornemanii was shown to produce halomon, a halogenated monoterpene which has displayed promising cytotoxic activity. This study thus focused primarily on pursuing novel compounds from three endemic South African marine algal species which have never been analysed previously from a chemical perspective. These are Plocamium rigidum (Bory de Saint-Vincent), Laurencia natalensis (Kylin) and Delisea flaccida (Suhr) Papenfuss. Four known compounds and one new halogenated monoterpene, (2E,5E,7Z)-8-chloro- 7-(dichloromethyl)-4-hydroxy-3-methylocta-2,5,7-trienal, were isolated from Plocamium rigidum. The breast cancer (MCF-7 cell line) inhibitory activity for these compounds was assessed and it was observed that an increase in the lipophilic nature of the compounds produced more favourable IC50 values. A pre-cursor to bromofucin type compounds, cis-laurencenyne, was isolated from Laurencia natalensis, as well as a new acetoxy chamigrane type compound, 4-bromo- 3,10-dichloro-7-hydroxy-3,7,11,11-tetramethylspiro [6.6] undec-1-yl acetate. Delisea flaccida was seen to contain two known bromofuranone type compounds isolated as an isomeric mixture, 1-[(5Z)-4-bromo-5-(bromomethylidene)-2-oxo-2,5- dihydrofuran-3-yl] butyl acetate and 1-[(5E)-4-bromo-5-(bromomethylidene)-2- oxo-2,5-dihydrofuran-3-yl]butyl acetate. These compounds are famous for their ability to inhibit bacterial biofilm production and they have been isolated before from an Australian Delisea spp , Adobe Acrobat 9.53 Paper Capture Plug-in
- Full Text:
- Date Issued: 2013
- Authors: Fakee, Jameel
- Date: 2013
- Subjects: Metabolites Marine algae -- South Africa Marine algae -- Therapeutic use Metabolites -- Therapeutic use Marine metabolites Plocamocera Red algae Laurencia Delisea flaccida
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3733 , http://hdl.handle.net/10962/d1001472
- Description: Secondary metabolites from natural sources are fast growing as popular drug leads. The structural novelty and favourable biological activity that these compounds display contribute to their popularity as drugs of the future. Examples of such compounds include the potent anticancer drug paclitaxel isolated from the bark of a yew tree as well as the more commonly known analgesic aspirin which stems from the bark of the willow tree. The biological activities exhibited by these secondary metabolites are vast and range from antimicrobial to anticancer activity to mention but a few. As a result, the isolation of novel compounds from natural sources is on the rise. The South African seaboard is home to a wealth of various marine algal species which produce fascinating secondary metabolites. For example, Portierria hornemanii was shown to produce halomon, a halogenated monoterpene which has displayed promising cytotoxic activity. This study thus focused primarily on pursuing novel compounds from three endemic South African marine algal species which have never been analysed previously from a chemical perspective. These are Plocamium rigidum (Bory de Saint-Vincent), Laurencia natalensis (Kylin) and Delisea flaccida (Suhr) Papenfuss. Four known compounds and one new halogenated monoterpene, (2E,5E,7Z)-8-chloro- 7-(dichloromethyl)-4-hydroxy-3-methylocta-2,5,7-trienal, were isolated from Plocamium rigidum. The breast cancer (MCF-7 cell line) inhibitory activity for these compounds was assessed and it was observed that an increase in the lipophilic nature of the compounds produced more favourable IC50 values. A pre-cursor to bromofucin type compounds, cis-laurencenyne, was isolated from Laurencia natalensis, as well as a new acetoxy chamigrane type compound, 4-bromo- 3,10-dichloro-7-hydroxy-3,7,11,11-tetramethylspiro [6.6] undec-1-yl acetate. Delisea flaccida was seen to contain two known bromofuranone type compounds isolated as an isomeric mixture, 1-[(5Z)-4-bromo-5-(bromomethylidene)-2-oxo-2,5- dihydrofuran-3-yl] butyl acetate and 1-[(5E)-4-bromo-5-(bromomethylidene)-2- oxo-2,5-dihydrofuran-3-yl]butyl acetate. These compounds are famous for their ability to inhibit bacterial biofilm production and they have been isolated before from an Australian Delisea spp , Adobe Acrobat 9.53 Paper Capture Plug-in
- Full Text:
- Date Issued: 2013
The medicinal plant Sutherlandia Frutescens regulates gene expression to reverse insulin resistace in rats
- Authors: Fortuin, Melissa
- Date: 2013
- Subjects: Insulin resistance , Medicinal plants , Genetic regulation , Insulin resistance -- Animal models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10349 , http://hdl.handle.net/10948/d1020823
- Description: Obesity can lead to Type 2 Diabetes, both conditions increase in association with physical inactivity and high-energy diets, resulting in elevated blood glucose, decreased insulin sensitivity and increased insulin resistance. Sutherlandia frutescens (S.frutescens), an anti-diabetic plant, reverses and prevents insulin resistance in a rat model and human cell culture model. Gene expression analysis in hepatocyte cultures, identified genes down regulated in insulin resistance and up regulated by S.frutescens. These included genes encoding vesicle transporter proteins, hypothesised to be linked to hepatic lipid accumulation and lipid droplet formation during insulin resistance. The aim of this study was to investigate critical genes involved in lipid droplet formation, vesicle assembly and transport in high fat diet (HFD)-induced insulin resistant rat liver tissue during the development of insulin resistance and the reversal of these changes by S.frutescens. Rats were fed a low fat diet (LFD) or HFD supplemented with S.frutescens for 2, 4 and 8 weeks. Rats fed a HFD for 12 weeks developed insulin resistance, confirmed by plasma glucose and insulin levels (compared to normal controls). Groups of these rats were gavaged with S. frutescens (50mg/kg BW), Metformin (13mg/kg BW) or water for a further 4 weeks and starved for 12 hours, anaesthetized and blood removed by heart puncture. Liver was stored in RNA-Later™ for qRT-PCR and snap-frozen in liquid nitrogen for western blotting and confocal microscopy analysis. Changes in expression of vesicle transporter genes VAMP3 and NSF were analysed by qRT-PCR and changes in the protein expression by western blotting analysis. Proteins were localised within the liver by confocal immunohistochemistry using ZEN lite™ software. Statistical analysis was performed using One-Way ANOVA and unpaired t-test. mRNA gene expression of vesicle transport components VAMP3, NSF and SNAP25 showed relatively moderate changes with considerable individual variation within control or experimental groups. Uncorrelated changes in mRNA and protein products were found and may be due to differential regulation by siRNA. Proteins also showed altered staining patterns in high fat diet rats that reverted towards normal on S. frutescens treatment, potentially reflecting functional changes associated with transport of lipid-filled vesicles.
- Full Text:
- Date Issued: 2013
- Authors: Fortuin, Melissa
- Date: 2013
- Subjects: Insulin resistance , Medicinal plants , Genetic regulation , Insulin resistance -- Animal models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10349 , http://hdl.handle.net/10948/d1020823
- Description: Obesity can lead to Type 2 Diabetes, both conditions increase in association with physical inactivity and high-energy diets, resulting in elevated blood glucose, decreased insulin sensitivity and increased insulin resistance. Sutherlandia frutescens (S.frutescens), an anti-diabetic plant, reverses and prevents insulin resistance in a rat model and human cell culture model. Gene expression analysis in hepatocyte cultures, identified genes down regulated in insulin resistance and up regulated by S.frutescens. These included genes encoding vesicle transporter proteins, hypothesised to be linked to hepatic lipid accumulation and lipid droplet formation during insulin resistance. The aim of this study was to investigate critical genes involved in lipid droplet formation, vesicle assembly and transport in high fat diet (HFD)-induced insulin resistant rat liver tissue during the development of insulin resistance and the reversal of these changes by S.frutescens. Rats were fed a low fat diet (LFD) or HFD supplemented with S.frutescens for 2, 4 and 8 weeks. Rats fed a HFD for 12 weeks developed insulin resistance, confirmed by plasma glucose and insulin levels (compared to normal controls). Groups of these rats were gavaged with S. frutescens (50mg/kg BW), Metformin (13mg/kg BW) or water for a further 4 weeks and starved for 12 hours, anaesthetized and blood removed by heart puncture. Liver was stored in RNA-Later™ for qRT-PCR and snap-frozen in liquid nitrogen for western blotting and confocal microscopy analysis. Changes in expression of vesicle transporter genes VAMP3 and NSF were analysed by qRT-PCR and changes in the protein expression by western blotting analysis. Proteins were localised within the liver by confocal immunohistochemistry using ZEN lite™ software. Statistical analysis was performed using One-Way ANOVA and unpaired t-test. mRNA gene expression of vesicle transport components VAMP3, NSF and SNAP25 showed relatively moderate changes with considerable individual variation within control or experimental groups. Uncorrelated changes in mRNA and protein products were found and may be due to differential regulation by siRNA. Proteins also showed altered staining patterns in high fat diet rats that reverted towards normal on S. frutescens treatment, potentially reflecting functional changes associated with transport of lipid-filled vesicles.
- Full Text:
- Date Issued: 2013
The production of Omega 3 fatty acids by a mixed microalgae culture
- Authors: Kimono, Diana Agnes
- Date: 2013
- Subjects: Omega-3 fatty acids , Algae culture , Microalgae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/6498 , vital:21097
- Description: Background and Aim: Microalgae are a potential economical source of omega-3 fatty acids, which are known for their health benefits. Omega-3 fatty acids derived from microalgae are however still expensive due to high costs involved in production. These costs can partly be attributed to cultivation of microalgae in unialgal cultures, which are prone to contamination, difficult to scale up and require stringent control of growth conditions. This study therefore is aimed to investigate the feasibility of using a mixed microalgae culture for the production of omega-3 fatty acids. Methods and materials: The microalgae were grown under uncontrolled conditions in a hanging-bag photo-bioreactor, with only the phosphorus-nitrogen ratio (P:N-ratio) varied. Variations in the different population proportions in the culture were studied and related to the biomass, total fatty acid and omega-3 fatty acid productivity of the culture. Finally, a comparison was made between the results obtained in this study and similar studies found in literature. Results and discussion: The mixed culture used was composed of several green microalgae, whose proportions varied with P:N-ratio, season, and age of the culture. Different interactions between the populations were observable, and these were thought to influence the culture’s biomass, total fatty acids (TFAs) and omega-3 fatty acid productivity. The TFA content of the culture was ~10-20% by the end of the exponential phase, depending on the nutrients supplied. The fatty acids were composed of mostly unsaturated fatty acids, the majority of which were omega-3 fatty acids; C18:3ω3 (up to 50% of TFA), C16:4ω3 (up to 15%) and C18:4ω3 (up to 5%). Other fatty acids observed included C16:0 (up to 25%), C18:1ω9/C18:1ω8 (up to 20%), C18:2ω6 (up to 5%), traces of C18:0, C18:3ω6, C17:0, C16:3ω3 and C16:1ω7 were also detected. The presence of these fatty acids was found to vary depending on season, P:N-ratio, and age of the culture. When compared to studies in the literature, the mixed culture was found to perform better than, or as well as reported studies, where unialgal cultures were cultivated under controlled laboratory conditions. Conclusion: In view of the reported advantages of cultivating mixed cultures, the production of omega-3 fatty acids via such cultures appears attractive. More research however is needed to optimise the culture; study interactions between the organisms and their effect on biomass, total fatty acid and omega-3 fatty acid productivity. Finally, the economic implications of using mixed cultures need to be evaluated as well.
- Full Text:
- Date Issued: 2013
- Authors: Kimono, Diana Agnes
- Date: 2013
- Subjects: Omega-3 fatty acids , Algae culture , Microalgae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/6498 , vital:21097
- Description: Background and Aim: Microalgae are a potential economical source of omega-3 fatty acids, which are known for their health benefits. Omega-3 fatty acids derived from microalgae are however still expensive due to high costs involved in production. These costs can partly be attributed to cultivation of microalgae in unialgal cultures, which are prone to contamination, difficult to scale up and require stringent control of growth conditions. This study therefore is aimed to investigate the feasibility of using a mixed microalgae culture for the production of omega-3 fatty acids. Methods and materials: The microalgae were grown under uncontrolled conditions in a hanging-bag photo-bioreactor, with only the phosphorus-nitrogen ratio (P:N-ratio) varied. Variations in the different population proportions in the culture were studied and related to the biomass, total fatty acid and omega-3 fatty acid productivity of the culture. Finally, a comparison was made between the results obtained in this study and similar studies found in literature. Results and discussion: The mixed culture used was composed of several green microalgae, whose proportions varied with P:N-ratio, season, and age of the culture. Different interactions between the populations were observable, and these were thought to influence the culture’s biomass, total fatty acids (TFAs) and omega-3 fatty acid productivity. The TFA content of the culture was ~10-20% by the end of the exponential phase, depending on the nutrients supplied. The fatty acids were composed of mostly unsaturated fatty acids, the majority of which were omega-3 fatty acids; C18:3ω3 (up to 50% of TFA), C16:4ω3 (up to 15%) and C18:4ω3 (up to 5%). Other fatty acids observed included C16:0 (up to 25%), C18:1ω9/C18:1ω8 (up to 20%), C18:2ω6 (up to 5%), traces of C18:0, C18:3ω6, C17:0, C16:3ω3 and C16:1ω7 were also detected. The presence of these fatty acids was found to vary depending on season, P:N-ratio, and age of the culture. When compared to studies in the literature, the mixed culture was found to perform better than, or as well as reported studies, where unialgal cultures were cultivated under controlled laboratory conditions. Conclusion: In view of the reported advantages of cultivating mixed cultures, the production of omega-3 fatty acids via such cultures appears attractive. More research however is needed to optimise the culture; study interactions between the organisms and their effect on biomass, total fatty acid and omega-3 fatty acid productivity. Finally, the economic implications of using mixed cultures need to be evaluated as well.
- Full Text:
- Date Issued: 2013