An investigation of the security of passwords derived from African languages
- Authors: Sishi, Sibusiso Teboho
- Date: 2019
- Subjects: Computers -- Access control -- Passwords , Computer users -- Attitudes , Internet -- Access control , Internet -- Security measures , Internet -- Management , Data protection
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/163273 , vital:41024
- Description: Password authentication has become ubiquitous in the cyber age. To-date, there have been several studies on country based passwords by authors who studied, amongst others, English, Finnish, Italian and Chinese based passwords. However, there has been a lack of focused study on the type of passwords that are being created in Africa and whether there are benefits in creating passwords in an African language. For this research, password databases containing LAN Manager (LM) and NT LAN Manager (NTLM) hashes extracted from South African organisations in a variety of sectors in the economy, were obtained to gain an understanding of user behaviour in creating passwords. Analysis of the passwords obtained from these hashes (using several cracking methods) showed that many organisational passwords are based on the English language. This is understandable considering that the business language in South Africa is English even though South Africa has 11 official languages. African language based passwords were derived from known English weak passwords and some of the passwords were appended with numbers and special characters. The African based passwords created using eight Southern African languages were then uploaded to the Internet to test the security around using passwords based on African languages. Since most of the passwords were able to be cracked by third party researchers, we conclude that any password that is derived from known weak English words marked no improvement in the security of a password written in an African language, especially the more widely spoken languages, namely, isiZulu, isiXhosa and Setswana.
- Full Text:
- Authors: Sishi, Sibusiso Teboho
- Date: 2019
- Subjects: Computers -- Access control -- Passwords , Computer users -- Attitudes , Internet -- Access control , Internet -- Security measures , Internet -- Management , Data protection
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/163273 , vital:41024
- Description: Password authentication has become ubiquitous in the cyber age. To-date, there have been several studies on country based passwords by authors who studied, amongst others, English, Finnish, Italian and Chinese based passwords. However, there has been a lack of focused study on the type of passwords that are being created in Africa and whether there are benefits in creating passwords in an African language. For this research, password databases containing LAN Manager (LM) and NT LAN Manager (NTLM) hashes extracted from South African organisations in a variety of sectors in the economy, were obtained to gain an understanding of user behaviour in creating passwords. Analysis of the passwords obtained from these hashes (using several cracking methods) showed that many organisational passwords are based on the English language. This is understandable considering that the business language in South Africa is English even though South Africa has 11 official languages. African language based passwords were derived from known English weak passwords and some of the passwords were appended with numbers and special characters. The African based passwords created using eight Southern African languages were then uploaded to the Internet to test the security around using passwords based on African languages. Since most of the passwords were able to be cracked by third party researchers, we conclude that any password that is derived from known weak English words marked no improvement in the security of a password written in an African language, especially the more widely spoken languages, namely, isiZulu, isiXhosa and Setswana.
- Full Text:
An investigation of the teaching of writing in Grade-9 English first-language classrooms: a case study of a selected government school in Namibia
- Martins, Simone Alexandra Domingues
- Authors: Martins, Simone Alexandra Domingues
- Date: 2019
- Subjects: English language -- Rhetoric -- Study and teaching -- Namibia , English language -- Study and teaching (Secondary) -- Namibia , English language == Composition and exercises -- Study and teaching (Secondary) -- Namibia
- Language: English
- Type: text , Thesis , Masters , MEd
- Identifier: http://hdl.handle.net/10962/92280 , vital:30699
- Description: The pedagogical practice choices teachers make when teaching writing in Grade-9 English first- language classrooms, as well as the extent to which these pedagogical practices appear to enable or constrain learners’ acquisition of writing skills as per grade-specific curricular expectations, are the focus of the study. It draws from Bernstein’s (1971) curriculum and society theory, as well as genre theory. Located within the qualitative case study approach, it is designed to investigate the reasons for Grade-9 English first-language learners’ underperformance in Paper 2, the composition component of the Namibian external examinations. Drawing from the interpretivist paradigm, the study uses one-on-one interviews, semi-structured classroom observations, as well as documentary evidence of the Namibian English first-language syllabus and examples of learners’ written work, to generate data. The research site and study participants were purposefully selected. The study involves two Grade-9 English first-language teachers and classrooms at one Namibian High School, and took place from the second to the third terms of 2017.
- Full Text:
- Authors: Martins, Simone Alexandra Domingues
- Date: 2019
- Subjects: English language -- Rhetoric -- Study and teaching -- Namibia , English language -- Study and teaching (Secondary) -- Namibia , English language == Composition and exercises -- Study and teaching (Secondary) -- Namibia
- Language: English
- Type: text , Thesis , Masters , MEd
- Identifier: http://hdl.handle.net/10962/92280 , vital:30699
- Description: The pedagogical practice choices teachers make when teaching writing in Grade-9 English first- language classrooms, as well as the extent to which these pedagogical practices appear to enable or constrain learners’ acquisition of writing skills as per grade-specific curricular expectations, are the focus of the study. It draws from Bernstein’s (1971) curriculum and society theory, as well as genre theory. Located within the qualitative case study approach, it is designed to investigate the reasons for Grade-9 English first-language learners’ underperformance in Paper 2, the composition component of the Namibian external examinations. Drawing from the interpretivist paradigm, the study uses one-on-one interviews, semi-structured classroom observations, as well as documentary evidence of the Namibian English first-language syllabus and examples of learners’ written work, to generate data. The research site and study participants were purposefully selected. The study involves two Grade-9 English first-language teachers and classrooms at one Namibian High School, and took place from the second to the third terms of 2017.
- Full Text:
An oversimplification of physiological principles leads to flawed macroecological analyses
- Boyles, Justin G, Levesque, Danielle L, Nowack, Julia, Wojciechowski, Michal S, Stawski, Clare, Fuller, Andrea, Smit, Ben, Tattersall, Glenn J
- Authors: Boyles, Justin G , Levesque, Danielle L , Nowack, Julia , Wojciechowski, Michal S , Stawski, Clare , Fuller, Andrea , Smit, Ben , Tattersall, Glenn J
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440505 , vital:73788 , https://doi.org/10.1002/ece3.5721
- Description: In light of the rapidly changing climate, there is an urgent need to develop a mechanistic understanding of how physiological functioning mediates ecological patterns. Recently, there has been a spate of papers using analyses that scale up from a standard physiological model, the Scholander–Irving model, to make predictions about range constraints on endothermic vertebrates (Buckley, Khaliq, Swanson, and Hof, 2018; Fristoe et al., 2015; Khaliq, Böhning‐Gaese, Prinzinger, Pfenninger, and Hof, 2017; Khaliq, Hof, Prinzinger, Böhning‐Gaese, and Pfenninger, 2014). Here, we argue that oversimplifications of the Scholander–Irving model and the use of questionable datasets lead to questionable macrophysiological analyses. Many of these problems have been addressed elsewhere, directly and indirectly (eg, McKechnie, Coe, Gerson, and Wolf, 2017; Mitchell et al., 2018), although the focus has largely been on the applicability of the Scholander–Irving model to warm environmental temperatures, which are often seen as more relevant to climate change. However, one specific aspect of the Scholander–Irving model, the assumption that energy expenditure of an endotherm below the thermoneutral zone (TNZ) can be described by basic Newtonian physics, has been used incorrectly in several papers. While not the only paper based on this assumption, the recent work by Buckley et al.(2018) reinvigorated discussions among physiologists about improper interpretations of the Scholander–Irving model. Our concerns are not new and have been voiced repeatedly in the past (Calder and Schmidt‐Nielsen, 1967; King, 1964; Tracy, 1972), but many of these ideas seem to have been buried by time.
- Full Text:
- Authors: Boyles, Justin G , Levesque, Danielle L , Nowack, Julia , Wojciechowski, Michal S , Stawski, Clare , Fuller, Andrea , Smit, Ben , Tattersall, Glenn J
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440505 , vital:73788 , https://doi.org/10.1002/ece3.5721
- Description: In light of the rapidly changing climate, there is an urgent need to develop a mechanistic understanding of how physiological functioning mediates ecological patterns. Recently, there has been a spate of papers using analyses that scale up from a standard physiological model, the Scholander–Irving model, to make predictions about range constraints on endothermic vertebrates (Buckley, Khaliq, Swanson, and Hof, 2018; Fristoe et al., 2015; Khaliq, Böhning‐Gaese, Prinzinger, Pfenninger, and Hof, 2017; Khaliq, Hof, Prinzinger, Böhning‐Gaese, and Pfenninger, 2014). Here, we argue that oversimplifications of the Scholander–Irving model and the use of questionable datasets lead to questionable macrophysiological analyses. Many of these problems have been addressed elsewhere, directly and indirectly (eg, McKechnie, Coe, Gerson, and Wolf, 2017; Mitchell et al., 2018), although the focus has largely been on the applicability of the Scholander–Irving model to warm environmental temperatures, which are often seen as more relevant to climate change. However, one specific aspect of the Scholander–Irving model, the assumption that energy expenditure of an endotherm below the thermoneutral zone (TNZ) can be described by basic Newtonian physics, has been used incorrectly in several papers. While not the only paper based on this assumption, the recent work by Buckley et al.(2018) reinvigorated discussions among physiologists about improper interpretations of the Scholander–Irving model. Our concerns are not new and have been voiced repeatedly in the past (Calder and Schmidt‐Nielsen, 1967; King, 1964; Tracy, 1972), but many of these ideas seem to have been buried by time.
- Full Text:
Analyzing the Anthropogenic Allee Effect in cycad (Encephalartos species) populations in South Africa: an evaluation of illegal trade and conservation policy
- Authors: Earle, Sasha
- Date: 2019
- Subjects: Allee effect , Cycads -- Conservation -- South Africa , Botany, Economic -- South Africa , Rare plants -- South Africa , Endangered plants -- South Africa , Wild plant trade -- Law and legislation -- South Africa
- Language: English
- Type: text , Thesis , Masters , Mcom
- Identifier: http://hdl.handle.net/10962/95565 , vital:31171
- Description: South Africa is a country known for rich biodiversity and ecosystems across the land and seascape. South Africa is one of the global hotspots for cycad diversity. Cycads are known to be the world’s most threatened plant species; declining in South Africa at a rapid pace, with threat of extinction in the wild. The main factor being harvesting from the wild for private collections. Rare cycad species’ are especially sought after by collectors. Economic theory assumes that the exploitation of a species is unlikely to result in extinction due to the increasing costs of finding the last few individuals of a species. However, the theory of the Anthropogenic Allee Effect (AAE) suggests that if consumers place a disproportionate value on a rare species’, a cycle may result whereby increased exploitation decreases population size, increasing the value of the species and, consequently, leading to its extinction in the wild. This hypothesis was tested for 37 Encephalartos species using data collected on wild populations, auction prices and the IUCN Red List status for the year 2010. It was hypothesised that an AAE was present within Encephalartos species, as three species have already gone extinct in the wild. The price per centimetre was positively correlated to the rarity of the species and the price per centimetre was negatively correlated to the wild population size. The results suggest a trend of an AAE for the year 2010. Adequate conservation policies are needed to reduce the effects of demand on illegal harvesting and prevent extinction in the wild. The effect of rarity needs to be taken into account to ensure successfulness of such policies. The most recent conservation policy implemented to protect cycads in South Africa is the Strategy and Action for the Management of Cycads in South Africa, which was introduced in 2016. The successfulness of this policy cannot, however, be analysed due to a lack of census data following its implementation.
- Full Text:
- Authors: Earle, Sasha
- Date: 2019
- Subjects: Allee effect , Cycads -- Conservation -- South Africa , Botany, Economic -- South Africa , Rare plants -- South Africa , Endangered plants -- South Africa , Wild plant trade -- Law and legislation -- South Africa
- Language: English
- Type: text , Thesis , Masters , Mcom
- Identifier: http://hdl.handle.net/10962/95565 , vital:31171
- Description: South Africa is a country known for rich biodiversity and ecosystems across the land and seascape. South Africa is one of the global hotspots for cycad diversity. Cycads are known to be the world’s most threatened plant species; declining in South Africa at a rapid pace, with threat of extinction in the wild. The main factor being harvesting from the wild for private collections. Rare cycad species’ are especially sought after by collectors. Economic theory assumes that the exploitation of a species is unlikely to result in extinction due to the increasing costs of finding the last few individuals of a species. However, the theory of the Anthropogenic Allee Effect (AAE) suggests that if consumers place a disproportionate value on a rare species’, a cycle may result whereby increased exploitation decreases population size, increasing the value of the species and, consequently, leading to its extinction in the wild. This hypothesis was tested for 37 Encephalartos species using data collected on wild populations, auction prices and the IUCN Red List status for the year 2010. It was hypothesised that an AAE was present within Encephalartos species, as three species have already gone extinct in the wild. The price per centimetre was positively correlated to the rarity of the species and the price per centimetre was negatively correlated to the wild population size. The results suggest a trend of an AAE for the year 2010. Adequate conservation policies are needed to reduce the effects of demand on illegal harvesting and prevent extinction in the wild. The effect of rarity needs to be taken into account to ensure successfulness of such policies. The most recent conservation policy implemented to protect cycads in South Africa is the Strategy and Action for the Management of Cycads in South Africa, which was introduced in 2016. The successfulness of this policy cannot, however, be analysed due to a lack of census data following its implementation.
- Full Text:
Another world is possible: the socialist mural in Luanda as Visual Anticipation of a New Socialist Society. We travel the SpaceWay-Black Imagination, Fragments and Diffractions
- Authors: Siegert, Nadine
- Date: 2019
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/146309 , vital:38514 , ISBN 9783960915300
- Description: Book abstract. From the visual politics of the FRELIMO-liberation script in Mozambique via the brooms and spoons of Le Balai Citoyen in Burkina Faso, to the updating of images from past revolutions on Twitter and Facebook, often in the diaspora – images play a key role in the envisioning of futures and social utopia. And more than that: Revolutions, understood as moments of radical social and cultural change, are driven by images, as empirical investigations on- and offline show. But what actually constitutes the 'seismographic power' of images, and the sustainability of icons from past ruptures in terms of radicalism, such as the portraits of Burkina Faso's and Mozambiques first presidents' Thomas Sankara and Samora Machel?.
- Full Text:
- Authors: Siegert, Nadine
- Date: 2019
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/146309 , vital:38514 , ISBN 9783960915300
- Description: Book abstract. From the visual politics of the FRELIMO-liberation script in Mozambique via the brooms and spoons of Le Balai Citoyen in Burkina Faso, to the updating of images from past revolutions on Twitter and Facebook, often in the diaspora – images play a key role in the envisioning of futures and social utopia. And more than that: Revolutions, understood as moments of radical social and cultural change, are driven by images, as empirical investigations on- and offline show. But what actually constitutes the 'seismographic power' of images, and the sustainability of icons from past ruptures in terms of radicalism, such as the portraits of Burkina Faso's and Mozambiques first presidents' Thomas Sankara and Samora Machel?.
- Full Text:
Anti-HIV-1 integrase potency of methylgallate from Alchornea cordifolia using in vitro and in silico approaches:
- Noundou, Xavier S, Musyoka, Thommas M, Moses, Vuyani, Ndinteh, Derek T, Mnkandhla, Dumisani, Hoppe, Heinrich C, Tastan Bishop, Özlem, Krause, Rui W M
- Authors: Noundou, Xavier S , Musyoka, Thommas M , Moses, Vuyani , Ndinteh, Derek T , Mnkandhla, Dumisani , Hoppe, Heinrich C , Tastan Bishop, Özlem , Krause, Rui W M
- Date: 2019
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/162975 , vital:41001 , https://0-doi.org.wam.seals.ac.za/10.1038/s41598-019-41403-x
- Description: According to the 2018 report of the United Nations Programme on HIV/AIDS (UNAIDS), acquired immune deficiency syndrome (AIDS), a disease caused by the human immunodeficiency virus (HIV), remains a significant public health problem. The non-existence of a cure or effective vaccine for the disease and the associated emergence of resistant viral strains imply an urgent need for the discovery of novel anti-HIV drug candidates. The current study aimed to identify potential anti-retroviral compounds from Alchornea cordifolia.
- Full Text:
- Authors: Noundou, Xavier S , Musyoka, Thommas M , Moses, Vuyani , Ndinteh, Derek T , Mnkandhla, Dumisani , Hoppe, Heinrich C , Tastan Bishop, Özlem , Krause, Rui W M
- Date: 2019
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/162975 , vital:41001 , https://0-doi.org.wam.seals.ac.za/10.1038/s41598-019-41403-x
- Description: According to the 2018 report of the United Nations Programme on HIV/AIDS (UNAIDS), acquired immune deficiency syndrome (AIDS), a disease caused by the human immunodeficiency virus (HIV), remains a significant public health problem. The non-existence of a cure or effective vaccine for the disease and the associated emergence of resistant viral strains imply an urgent need for the discovery of novel anti-HIV drug candidates. The current study aimed to identify potential anti-retroviral compounds from Alchornea cordifolia.
- Full Text:
Anticancer evaluation of ruthenium (III) complexes with N-donor ligands tethered to coumarin or uracil moieties:
- Gramni, Larusha, Vukea, Nyeleti, Chakraborty, Abir, Samson, William J, Dingle, Laura M K, Xulu, Bheki, de la Mare, Jo-Anne, Edkins, Adrienne L, Booysen, Irvin N
- Authors: Gramni, Larusha , Vukea, Nyeleti , Chakraborty, Abir , Samson, William J , Dingle, Laura M K , Xulu, Bheki , de la Mare, Jo-Anne , Edkins, Adrienne L , Booysen, Irvin N
- Date: 2019
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/163477 , vital:41041 , DOI: 10.1016/j.ica.2019.04.01
- Description: In this study, the synthesis and characterization of new paramagnetic ruthenium(III) complexes: cis-[RuCl2(urdpa)] (1) {Hurdpa = 6-((bis(pyridin-2-ylmethyl)amino)methyl)uracil} and fac-[RuCl3(chrdpa)] (2) {chrdpa = 4-((bis(pyridin-2-ylmethyl)amino)methyl)-7-methoxycoumarin} are reported. These metal complexes have been comprehensively characterized by an array of physicochemical techniques and the X-ray solid-state structures of 1 and Hurdpa have been attained.
- Full Text:
- Authors: Gramni, Larusha , Vukea, Nyeleti , Chakraborty, Abir , Samson, William J , Dingle, Laura M K , Xulu, Bheki , de la Mare, Jo-Anne , Edkins, Adrienne L , Booysen, Irvin N
- Date: 2019
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/163477 , vital:41041 , DOI: 10.1016/j.ica.2019.04.01
- Description: In this study, the synthesis and characterization of new paramagnetic ruthenium(III) complexes: cis-[RuCl2(urdpa)] (1) {Hurdpa = 6-((bis(pyridin-2-ylmethyl)amino)methyl)uracil} and fac-[RuCl3(chrdpa)] (2) {chrdpa = 4-((bis(pyridin-2-ylmethyl)amino)methyl)-7-methoxycoumarin} are reported. These metal complexes have been comprehensively characterized by an array of physicochemical techniques and the X-ray solid-state structures of 1 and Hurdpa have been attained.
- Full Text:
Antimicrobial resistance awareness program at Settlers Hospital
- Manhanzva, Rufaro Immaculate
- Authors: Manhanzva, Rufaro Immaculate
- Date: 2019
- Language: English
- Type: text , Thesis , Masters , MPharm
- Identifier: http://hdl.handle.net/10962/97712 , vital:31475
- Description: Expected release date-April 2021
- Full Text: false
- Authors: Manhanzva, Rufaro Immaculate
- Date: 2019
- Language: English
- Type: text , Thesis , Masters , MPharm
- Identifier: http://hdl.handle.net/10962/97712 , vital:31475
- Description: Expected release date-April 2021
- Full Text: false
Antiplasmodial Activity of the n-Hexane Extract from Pleurotus ostreatus (Jacq. ex. Fr) P. Kumm
- Afieroho, Ozadheoghene E, Siwe-Noundou, Xavier, Onyia, Chiazor P, Festus, Osamuyi H, Chukwu, Elizabeth C, Adedokun, Olutayo M, Isaacs, Michelle, Hoppe, Heinrich C, Krause, Rui W M, Abo, Kio A
- Authors: Afieroho, Ozadheoghene E , Siwe-Noundou, Xavier , Onyia, Chiazor P , Festus, Osamuyi H , Chukwu, Elizabeth C , Adedokun, Olutayo M , Isaacs, Michelle , Hoppe, Heinrich C , Krause, Rui W M , Abo, Kio A
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/194981 , vital:45516 , xlink:href="https://doi.org/10.4274/tjps.18894"
- Description: Objectives: Several mushrooms species have been reported to be nematophagous and antiprotozoan. This study reported the antiplasmodial and cytotoxic properties of the n-hexane extract from the edible mushroom Pleurotus ostreatus and the isolation of a sterol from the extract. Materials and Methods: Antiplasmodial and cytotoxicity assays were done in vitro using the plasmodium lactate dehydrogenase assay and human HeLa cervical cell lines, respectively. The structure of the isolated compound from the n-hexane extract was elucidated using spectroscopic techniques. Results: The n-hexane extract (yield: 0.93% w/w) showed dose dependent antiplasmodial activity with the trend in parasite inhibition of: chloroquine (IC50=0.016 μg/mL) > n-hexane extract (IC50=25.18 μg/mL). It also showed mild cytotoxicity (IC50>100 μg/mL; selectivity index >4) compared to the reference drug emetine (IC50=0.013 μg/mL). The known sterol, ergostan-5,7,22-trien-3-ol, was isolated and characterized from the extract. Conclusion: This study reporting for the first time the antiplasmodial activity of P. ostreatus revealed its nutraceutical potential in the management of malaria.
- Full Text:
- Authors: Afieroho, Ozadheoghene E , Siwe-Noundou, Xavier , Onyia, Chiazor P , Festus, Osamuyi H , Chukwu, Elizabeth C , Adedokun, Olutayo M , Isaacs, Michelle , Hoppe, Heinrich C , Krause, Rui W M , Abo, Kio A
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/194981 , vital:45516 , xlink:href="https://doi.org/10.4274/tjps.18894"
- Description: Objectives: Several mushrooms species have been reported to be nematophagous and antiprotozoan. This study reported the antiplasmodial and cytotoxic properties of the n-hexane extract from the edible mushroom Pleurotus ostreatus and the isolation of a sterol from the extract. Materials and Methods: Antiplasmodial and cytotoxicity assays were done in vitro using the plasmodium lactate dehydrogenase assay and human HeLa cervical cell lines, respectively. The structure of the isolated compound from the n-hexane extract was elucidated using spectroscopic techniques. Results: The n-hexane extract (yield: 0.93% w/w) showed dose dependent antiplasmodial activity with the trend in parasite inhibition of: chloroquine (IC50=0.016 μg/mL) > n-hexane extract (IC50=25.18 μg/mL). It also showed mild cytotoxicity (IC50>100 μg/mL; selectivity index >4) compared to the reference drug emetine (IC50=0.013 μg/mL). The known sterol, ergostan-5,7,22-trien-3-ol, was isolated and characterized from the extract. Conclusion: This study reporting for the first time the antiplasmodial activity of P. ostreatus revealed its nutraceutical potential in the management of malaria.
- Full Text:
Application of computational methods in elucidating the isomerization step in the biosynthesis of coumarins
- Authors: Tshiwawa, Tendamudzimu
- Date: 2019
- Subjects: Coumarins , Isomerization , Biosynthesis , Organic compounds -- Synthesis , Cinnamic acid
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/67646 , vital:29124
- Description: The identity of the enzyme(s) responsible for the biosynthetic transformation of cinnamic acid derivatives to important, naturally occurring coumarins has yet to be established. This study constitutes a high-level theoretical analysis of the possibility that a recently reported molecular mechanism of the synthesis of coumarins from Baylis-Hillman adducts, may provide a viable model for three critical phases in the biosynthetic pathway Particular attention has been given to the first of these phases: i) E→Z isomerisation of the cinnamic acid precursor; ii) Cyclisation (lactonisation) to the hemi-acetal intermediate; and ii) Dehydration to afford the coumarin derivative. In order to accomplish this analysis, an enzyme capable, theoretically, of effecting this E→Z isomerisation required identification, and its potential involvement in the transformation mechanism explored. Combined Molecular Mechanics and high-level Quantum Mechanical/DFT calculations were used to access complementary models of appropriate complexes and relevant processes within the enzyme active sites of a range of eleven Chalcone Isomerase (CHI) enzyme candidates, the structures of which were downloaded from the Protein Data Bank. Detailed B3LYP/6-31+G(d,p) calculations have provided pictures of the relative populations of conformations within the ensemble of conformations available at normal temperatures. Conformations of several protonation states of cinnamic acid derivatives have been studied in this way, and the results obtained showed that coupled protonation and deprotonation of (E)-o-coumaric acid provides a viable approach to achieve the E→Z isomerization. In silico docking of the B3LYP/6-31+G(d,p) optimized (E)-o-coumaric acid derivatives in the active sites of each of the candidate CHI enzymes (CHI) revealed that (E)-o-coumaric acid fits well within the active sites of Medicago Sativa CHI crystallographic structures with 1FM8 showing best potential for not only accommodating (E)-o-coumaric acid , but also providing appropriate protein active site residues to effect the simultaneous protonation and deprotonation of the substrate , two residues being optimally placed to facilitate these critical processes. Further exploration of the chemical properties and qualities of selected CHI enzymes, undertaken using High Throughput Virtual Screening (HTVS), confirmed 1FM8 as a viable choice for further studies of the enzyme-catalysed E→Z isomerization of (E)-o-coumaric acid. A molecular dynamics study, performed to further evaluate the evolution of (E)-o-coumaric acid in the CHI active site over time, showed that the ligand in the 1FM8 active site is not only stable, but also that the desired protein-ligand interactions persist throughout the simulation period to facilitate the E→Z isomerization. An integrated molecular orbital and molecular mechanics (ONIOM) study of the 1FM8-(E)-o-coumaric acid complex, involving the direct protonation and deprotonation of the ligand by protein residues; has provided a plausible mechanism for the E → Z isomerization of (E)-o-coumaric acid within the 1FM8 active site; a transition state complex (with an activation energy of ca. 50 kCal.mol-1) has been located and its connection with both the (E)- and (Z)-o-coumaric acid isomer has been confirmed by Intrinsic Reaction Coordinate (IRC) calculations. More realistic models of the 1FM8-(E)-o-coumaric acid complex, with the inclusion of water solvent molecules, have been obtained at both the QM/MM and adaptive QM/MM levels which simulate the dynamic active site at the QM level. The results indicate that the simultaneous protonation and deprotonation of (E)-o-coumaric acid within the CHI enzyme is a water-mediated process – a conclusion consistent with similar reported processes. Visual inspection of the 1FM8-(Z)-o-coumaric acid complex reveals both the necessary orientation of the phenolic and carboxylic acid moieties of the (Z)-o-coumaric acid and the presence of appropriate, proximal active site residues with the potential to permit catalysis of the subsequent lactonisation and dehydration steps required to generate coumarin.
- Full Text:
- Authors: Tshiwawa, Tendamudzimu
- Date: 2019
- Subjects: Coumarins , Isomerization , Biosynthesis , Organic compounds -- Synthesis , Cinnamic acid
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/67646 , vital:29124
- Description: The identity of the enzyme(s) responsible for the biosynthetic transformation of cinnamic acid derivatives to important, naturally occurring coumarins has yet to be established. This study constitutes a high-level theoretical analysis of the possibility that a recently reported molecular mechanism of the synthesis of coumarins from Baylis-Hillman adducts, may provide a viable model for three critical phases in the biosynthetic pathway Particular attention has been given to the first of these phases: i) E→Z isomerisation of the cinnamic acid precursor; ii) Cyclisation (lactonisation) to the hemi-acetal intermediate; and ii) Dehydration to afford the coumarin derivative. In order to accomplish this analysis, an enzyme capable, theoretically, of effecting this E→Z isomerisation required identification, and its potential involvement in the transformation mechanism explored. Combined Molecular Mechanics and high-level Quantum Mechanical/DFT calculations were used to access complementary models of appropriate complexes and relevant processes within the enzyme active sites of a range of eleven Chalcone Isomerase (CHI) enzyme candidates, the structures of which were downloaded from the Protein Data Bank. Detailed B3LYP/6-31+G(d,p) calculations have provided pictures of the relative populations of conformations within the ensemble of conformations available at normal temperatures. Conformations of several protonation states of cinnamic acid derivatives have been studied in this way, and the results obtained showed that coupled protonation and deprotonation of (E)-o-coumaric acid provides a viable approach to achieve the E→Z isomerization. In silico docking of the B3LYP/6-31+G(d,p) optimized (E)-o-coumaric acid derivatives in the active sites of each of the candidate CHI enzymes (CHI) revealed that (E)-o-coumaric acid fits well within the active sites of Medicago Sativa CHI crystallographic structures with 1FM8 showing best potential for not only accommodating (E)-o-coumaric acid , but also providing appropriate protein active site residues to effect the simultaneous protonation and deprotonation of the substrate , two residues being optimally placed to facilitate these critical processes. Further exploration of the chemical properties and qualities of selected CHI enzymes, undertaken using High Throughput Virtual Screening (HTVS), confirmed 1FM8 as a viable choice for further studies of the enzyme-catalysed E→Z isomerization of (E)-o-coumaric acid. A molecular dynamics study, performed to further evaluate the evolution of (E)-o-coumaric acid in the CHI active site over time, showed that the ligand in the 1FM8 active site is not only stable, but also that the desired protein-ligand interactions persist throughout the simulation period to facilitate the E→Z isomerization. An integrated molecular orbital and molecular mechanics (ONIOM) study of the 1FM8-(E)-o-coumaric acid complex, involving the direct protonation and deprotonation of the ligand by protein residues; has provided a plausible mechanism for the E → Z isomerization of (E)-o-coumaric acid within the 1FM8 active site; a transition state complex (with an activation energy of ca. 50 kCal.mol-1) has been located and its connection with both the (E)- and (Z)-o-coumaric acid isomer has been confirmed by Intrinsic Reaction Coordinate (IRC) calculations. More realistic models of the 1FM8-(E)-o-coumaric acid complex, with the inclusion of water solvent molecules, have been obtained at both the QM/MM and adaptive QM/MM levels which simulate the dynamic active site at the QM level. The results indicate that the simultaneous protonation and deprotonation of (E)-o-coumaric acid within the CHI enzyme is a water-mediated process – a conclusion consistent with similar reported processes. Visual inspection of the 1FM8-(Z)-o-coumaric acid complex reveals both the necessary orientation of the phenolic and carboxylic acid moieties of the (Z)-o-coumaric acid and the presence of appropriate, proximal active site residues with the potential to permit catalysis of the subsequent lactonisation and dehydration steps required to generate coumarin.
- Full Text:
Applying distributed ledger technology to digital evidence integrity
- Weilbach, William T, Motara, Yusuf, M
- Authors: Weilbach, William T , Motara, Yusuf, M
- Date: 2019
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/428960 , vital:72549 , https://ieeexplore.ieee.org/abstract/document/8732798
- Description: This paper examines the way in which blockchain technology can be used to improve the verification of integrity of evidence in digital forensics. Some background into digital forensic practices and blockchain technology are discussed to provide necessary context. A particular scalable method of verifying point-in-time existence of a piece of digital evidence, using the OpenTimestamps (OTS) service, is described, and tests are carried out to independently validate the claims made by the service. The results demonstrate that the OTS service is highly reliable with a zero false positive and false negative error rate for timestamp attestations, but that it is not suitable for timesensitive timestamping due to the variance of the accuracy of timestamps induced by block confirmation times in the Bitcoin blockchain.
- Full Text:
- Authors: Weilbach, William T , Motara, Yusuf, M
- Date: 2019
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/428960 , vital:72549 , https://ieeexplore.ieee.org/abstract/document/8732798
- Description: This paper examines the way in which blockchain technology can be used to improve the verification of integrity of evidence in digital forensics. Some background into digital forensic practices and blockchain technology are discussed to provide necessary context. A particular scalable method of verifying point-in-time existence of a piece of digital evidence, using the OpenTimestamps (OTS) service, is described, and tests are carried out to independently validate the claims made by the service. The results demonstrate that the OTS service is highly reliable with a zero false positive and false negative error rate for timestamp attestations, but that it is not suitable for timesensitive timestamping due to the variance of the accuracy of timestamps induced by block confirmation times in the Bitcoin blockchain.
- Full Text:
Arbuscular mycorrhizal fungi as a bio-indicator of soil health under agricultural management practices in South Africa
- Authors: Sekgota, Wendy Maphefo
- Date: 2019
- Subjects: Soils -- Quality -- South Africa , Soil fertility -- South Africa , Fungi in agriculture -- South Africa , Mycorrhizal fungi , Vesicular-arbuscular mycorrhizas , Fungi -- Spores , Soils -- Agricultural chemical content
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/72161 , vital:30011
- Description: This study investigated the activity of arbuscular mycorrhizal (AM) fungi as a potential biological indicator of soil health under conventional and conservation agricultural management in South Africa. An experimental trial consisting of three replicates plots under conventional and reduced tillage subdivided into twelve treatments of six crops and two fertilizer inputs was assessed over four growing seasons for various AM fungal parameters such as spore density, most probable number (MPN) of propagules percentage root colonisation and easily extractable glomalin (EEG). Cropping combinations were maize monoculture; maize soybean rotation; maize cowpea rotation; maize cowpea intercropping; maize oats intercropping and maize vetch intercropping. Resident AM fungal spore numbers and EEG protein levels were very low and no root colonization was recorded in the first two growing seasons. These findings prompted the need for the inoculation of the study site in the third growing season with a commercial AM fungal product (MycorootTM). Spore numbers, EEG concentrations and percentage root colonisation increased 8 weeks after inoculation but were significantly reduced in the fourth growing season that was not inoculated. MPN infectivity increased with inoculation particularly under conventional tillage and maize monoculture. Resident spore taxa were morphologically identified into three genera Gigaspora, Scutellospora, and Glomus. For the first two growing seasons, the maize roots were heavily colonized by a pathogenic fungus after mycorrhizal inoculation no evidence of pathogenic fungi was observed. In the fourth growing season which did not receive inoculation, root colonization started to decline. Reduced tillage, high fertilizer input combined with maize cowpea rotation (MC) and maize hairy vetch intercropping (Mv) had a significant effect (P = 0.01) on AM fungal spore numbers. Cropping systems and high fertilizer input had a significant effect on EEG concentrations in the second growing season. Overall, fertilizer application and crop type had implications for mycorrhizal activity. The soil health status in this study site was deemed low as measured by the impaired mycorrhizal activity due to agricultural management practices. Field inoculation combined with classical and molecular tools could provide a more realistic assessment of the effect of agricultural management practices on AM fungi as potential bioindicators of soil health. Therefore, AM fungi could be used as bioindicators of soil health under agricultural management practices in South African soil conditions.
- Full Text:
- Authors: Sekgota, Wendy Maphefo
- Date: 2019
- Subjects: Soils -- Quality -- South Africa , Soil fertility -- South Africa , Fungi in agriculture -- South Africa , Mycorrhizal fungi , Vesicular-arbuscular mycorrhizas , Fungi -- Spores , Soils -- Agricultural chemical content
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/72161 , vital:30011
- Description: This study investigated the activity of arbuscular mycorrhizal (AM) fungi as a potential biological indicator of soil health under conventional and conservation agricultural management in South Africa. An experimental trial consisting of three replicates plots under conventional and reduced tillage subdivided into twelve treatments of six crops and two fertilizer inputs was assessed over four growing seasons for various AM fungal parameters such as spore density, most probable number (MPN) of propagules percentage root colonisation and easily extractable glomalin (EEG). Cropping combinations were maize monoculture; maize soybean rotation; maize cowpea rotation; maize cowpea intercropping; maize oats intercropping and maize vetch intercropping. Resident AM fungal spore numbers and EEG protein levels were very low and no root colonization was recorded in the first two growing seasons. These findings prompted the need for the inoculation of the study site in the third growing season with a commercial AM fungal product (MycorootTM). Spore numbers, EEG concentrations and percentage root colonisation increased 8 weeks after inoculation but were significantly reduced in the fourth growing season that was not inoculated. MPN infectivity increased with inoculation particularly under conventional tillage and maize monoculture. Resident spore taxa were morphologically identified into three genera Gigaspora, Scutellospora, and Glomus. For the first two growing seasons, the maize roots were heavily colonized by a pathogenic fungus after mycorrhizal inoculation no evidence of pathogenic fungi was observed. In the fourth growing season which did not receive inoculation, root colonization started to decline. Reduced tillage, high fertilizer input combined with maize cowpea rotation (MC) and maize hairy vetch intercropping (Mv) had a significant effect (P = 0.01) on AM fungal spore numbers. Cropping systems and high fertilizer input had a significant effect on EEG concentrations in the second growing season. Overall, fertilizer application and crop type had implications for mycorrhizal activity. The soil health status in this study site was deemed low as measured by the impaired mycorrhizal activity due to agricultural management practices. Field inoculation combined with classical and molecular tools could provide a more realistic assessment of the effect of agricultural management practices on AM fungi as potential bioindicators of soil health. Therefore, AM fungi could be used as bioindicators of soil health under agricultural management practices in South African soil conditions.
- Full Text:
Assessing household food insecurity experience in the context of deforestation in Cameroon
- Ngome, Precillia I T, Shackleton, Charlie M, Degrande, Ann, Nossi, Eric J, Ngome, Francis
- Authors: Ngome, Precillia I T , Shackleton, Charlie M , Degrande, Ann , Nossi, Eric J , Ngome, Francis
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/398180 , vital:69382 , xlink:href="https://doi.org/10.1016/j.foodpol.2019.02.003"
- Full Text:
- Authors: Ngome, Precillia I T , Shackleton, Charlie M , Degrande, Ann , Nossi, Eric J , Ngome, Francis
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/398180 , vital:69382 , xlink:href="https://doi.org/10.1016/j.foodpol.2019.02.003"
- Full Text:
Assessing the abundance of non-timber forest products in relation to forest succession on the Wild Coast, South Africa
- Authors: Njwaxu, Afika
- Date: 2019
- Subjects: Non-timber forest products -- South Africa -- Eastern Cape , Forest ecology -- South Africa -- Eastern Cape , Rural development -- South Africa -- Eastern Cape , Non-timber forest products -- South Africa -- Willowvale , Forest ecology -- South Africa -- Willowvale , Rural development -- South Africa -- Willowvale , Forest plants -- South Africa -- Eastern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/94090 , vital:30999
- Description: The number of people in the Eastern Cape, South Africa, that are engaging in arable cropping has declined markedly over the last few decades. This is due to a number of factors such as a decrease in human capital because of migration of able-bodied people to urban areas, disinclination to participate in farming, raiding of crops by livestock and lack of equipment. This has resulted in abandoned croplands being invaded by trees and shrubs as the start of forest succession leading to a change in species composition and the ecosystem benefits reaped from these sites. Key amongst these benefits is a variety of non-timber forests products (NTFPs) which are an integral part of livelihoods in the area. The study was conducted in Willowvale, on the Wild Coast, South Africa. Aerial photographs were used to determine when cessation of cropping occurred in local fields and when revegetation began in order to determine the age of old fields. Botanical inventory and Braun-Blanquet scale were used to assess species richness, composition and abundance of vegetation in fields abandoned at different times. Focus groups were used to identify NTFPs found in these old fields, their uses as well as rank their importance to the local people. Results showed an increase in woody cover with time since field abandonment. Species richness also increased with age of the old field with approximately three species gained per decade. When species richness was disaggregated by growth forms, herbaceous plants were abundant in the early stages of succession, shrubs in the mature stages and trees increased steadily with time. A total of 177 species were recorded from 50 plots that were sampled during the ecological data collection. Of these, 70 species (39.6%) were identified by the focus group participants as NTFPs. The participants grouped the NTFPs into six categories namely: food, building, medicinal, craft, cultural and energy. There was an increase of richness of NTFPs with forest succession; however the proportion of NTFPs decreased with age suggesting an increase in non-useful species. This suggests that harvesting from plots of different ages would be the optimal way for local people to get access to a large variety of NTFPs.
- Full Text:
- Authors: Njwaxu, Afika
- Date: 2019
- Subjects: Non-timber forest products -- South Africa -- Eastern Cape , Forest ecology -- South Africa -- Eastern Cape , Rural development -- South Africa -- Eastern Cape , Non-timber forest products -- South Africa -- Willowvale , Forest ecology -- South Africa -- Willowvale , Rural development -- South Africa -- Willowvale , Forest plants -- South Africa -- Eastern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/94090 , vital:30999
- Description: The number of people in the Eastern Cape, South Africa, that are engaging in arable cropping has declined markedly over the last few decades. This is due to a number of factors such as a decrease in human capital because of migration of able-bodied people to urban areas, disinclination to participate in farming, raiding of crops by livestock and lack of equipment. This has resulted in abandoned croplands being invaded by trees and shrubs as the start of forest succession leading to a change in species composition and the ecosystem benefits reaped from these sites. Key amongst these benefits is a variety of non-timber forests products (NTFPs) which are an integral part of livelihoods in the area. The study was conducted in Willowvale, on the Wild Coast, South Africa. Aerial photographs were used to determine when cessation of cropping occurred in local fields and when revegetation began in order to determine the age of old fields. Botanical inventory and Braun-Blanquet scale were used to assess species richness, composition and abundance of vegetation in fields abandoned at different times. Focus groups were used to identify NTFPs found in these old fields, their uses as well as rank their importance to the local people. Results showed an increase in woody cover with time since field abandonment. Species richness also increased with age of the old field with approximately three species gained per decade. When species richness was disaggregated by growth forms, herbaceous plants were abundant in the early stages of succession, shrubs in the mature stages and trees increased steadily with time. A total of 177 species were recorded from 50 plots that were sampled during the ecological data collection. Of these, 70 species (39.6%) were identified by the focus group participants as NTFPs. The participants grouped the NTFPs into six categories namely: food, building, medicinal, craft, cultural and energy. There was an increase of richness of NTFPs with forest succession; however the proportion of NTFPs decreased with age suggesting an increase in non-useful species. This suggests that harvesting from plots of different ages would be the optimal way for local people to get access to a large variety of NTFPs.
- Full Text:
Assessing the impact of the expanded Global Gag Rule in South Africa
- du Plessis, Ulandi, Sofika, Dumisa, Macleod, Catriona I, Mthethwa, Thobile
- Authors: du Plessis, Ulandi , Sofika, Dumisa , Macleod, Catriona I , Mthethwa, Thobile
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , report
- Identifier: http://hdl.handle.net/10962/434306 , vital:73047 , ISBN Report , https://www.ru.ac.za/media/rhodesuniversity/content/criticalstudiesinsexualitiesandreproduction/documents/IWHC_Report.pdf
- Description: South Africa has one of the most progressive abortion laws in the world and as the constitution states, South Africans also have “the right to make deci-sions concerning reproduction”(Constitution of the Republic of South Africa, 1996). Alongside being a free service, this should seemingly translate into accessible country-wide abortion services. However, less than one in ten public clinics actually perform abortions (Amnesty International, 2017). One of the main reasons for this has been the failure, on the part of the Depart-ment of Health, to regulate conscientious objection, ie the right of a healthcare worker to refuse to provide a service against which they are mor-ally opposed. Another reason is a lack of resources, in terms of both health professionals and finances, which manifest particularly in rural areas. As a result, women who are considering abortion either turn to illegal providers whose advertisements are scattered around towns, or towards private ser-vice providers such as Marie Stopes. Both options are usually costly, espe-cially to poor women. And illegal backstreet abortions often result in sepsis and infection. Recent data on abortion services in South Africa indicate that between 2016 and 2017, 20% of all abortions performed on women aged between 15-44 years were provided by the public health sector, while 26% and 54% of abortions were performed by illegal providers and the private health sector respectively (Lince-Deroche et al., 2018).
- Full Text:
- Authors: du Plessis, Ulandi , Sofika, Dumisa , Macleod, Catriona I , Mthethwa, Thobile
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , report
- Identifier: http://hdl.handle.net/10962/434306 , vital:73047 , ISBN Report , https://www.ru.ac.za/media/rhodesuniversity/content/criticalstudiesinsexualitiesandreproduction/documents/IWHC_Report.pdf
- Description: South Africa has one of the most progressive abortion laws in the world and as the constitution states, South Africans also have “the right to make deci-sions concerning reproduction”(Constitution of the Republic of South Africa, 1996). Alongside being a free service, this should seemingly translate into accessible country-wide abortion services. However, less than one in ten public clinics actually perform abortions (Amnesty International, 2017). One of the main reasons for this has been the failure, on the part of the Depart-ment of Health, to regulate conscientious objection, ie the right of a healthcare worker to refuse to provide a service against which they are mor-ally opposed. Another reason is a lack of resources, in terms of both health professionals and finances, which manifest particularly in rural areas. As a result, women who are considering abortion either turn to illegal providers whose advertisements are scattered around towns, or towards private ser-vice providers such as Marie Stopes. Both options are usually costly, espe-cially to poor women. And illegal backstreet abortions often result in sepsis and infection. Recent data on abortion services in South Africa indicate that between 2016 and 2017, 20% of all abortions performed on women aged between 15-44 years were provided by the public health sector, while 26% and 54% of abortions were performed by illegal providers and the private health sector respectively (Lince-Deroche et al., 2018).
- Full Text:
Assessing the performance of the ‘Aquaculture Operation Phakisa Strategy’ implementation from a stakeholder perspective
- Authors: Halley, Keagan Desmond
- Date: 2019
- Subjects: Marine resources -- Government policy -- South Africa , Fishery management -- South Africa , Aquaculture -- South Africa , Aquaculture industry -- South Africa , Operation Phakisa (South Africa)
- Language: English
- Type: text , Thesis , Masters , MBA
- Identifier: http://hdl.handle.net/10962/93867 , vital:30964
- Description: The global demand in aquatic products has seen a number of fisheries depleted worldwide through increase fishing pressure and over exploitation. South Africa in itself has 52 fisheries that are being exploited, of which 48% of these fisheries are of concern, either depleted or heavily depleted. Countries around world have now taken on the responsibility to reduce the reliance on capture fisheries and move towards a more sustainable form of ensuring fish supply. A stabilisation of fisheries stock worldwide has seen the rise of aquaculture as alternative activity that would contribute to reducing pressure on the global fisheries stocks while feeding the demand for fish protein. Aquaculture has since almost equaled the capture based fish supply, contributing to 44.1% of the world’s total fisheries products in 2014 (FAO, 2016). Over the last few years the South African government has focused on developing the aquaculture sector through the development of strategies and policies. The most recent strategy launched in 2014 was Operation Phakisa: Unlocking the Economic Potential of South Africa’s Oceans. The approach of Operation Phakisa looked at accelerating the delivery of government development priorities pertaining to the oceans economy, through development of plans and collaboration of delivery through all stakeholders (public and private stakeholders). Operation Phakisa methodology included bringing key stakeholders within academia, private and public sector, as well as civil society organisations to work together and develop strategies with clear targets that would drive the growth of their specific sectors. The year 2017 marked the midway point of the five year strategy implementation time frame, and an opportunity to assess the performance of the strategy implementation. In order to assess performance of the strategy implementation, the strategy implementation framework developed by Okumus (2003) was identified. Okumus (2003) identifies 11 implementation factors and categorizes these into four categories in the strategy implementation process, based on their role and characteristics, namely: Strategic Content (development of strategy), Strategic Context (internal and external context), Operational Process (operational planning, resource allocation, people, communication, and control) and Outcome (results of implementations process) (Okumus, 2003). The research involved the reviewing of documentation based on the strategy implementation as well as facilitated semi-structure interviews with two stakeholder groups. This was to gain an understanding from the stakeholders’ perspective, on whether the Aquaculture Operation Phakisa Strategy (AOPS) is implemented according to Okumus (2003) Strategy Implementation Framework. Two stakeholder groups were interviewed, namely the officials implementing the strategy, and the aquaculture farmers being affected by the strategy implementation. The research found that eight of out of 11 factors from Okumus (2003) Strategy Implementation Framework were identified as being gaps within the implementation of the AOPS. These gaps were identified across all four main categories for strategy implementation (Strategic content, strategic context, operational process and outcomes). They included; strategy development, organisation structure, organisational culture, leadership, resource allocation, people, communication and outcomes. Furthermore, the researcher found that the perception from the officials differed to that of the aquaculture farmers, with the officials observing a more negative perception towards factors pertaining to organisational structure, organisational culture, leadership, resources allocated, people, communication and outcomes. This negative perception was experience towards the DAFF, Branch Fisheries Management as a whole, rather than within the officials own Chief Directorate (CD:AED), responsible for implementing the strategy. The research assisted with understanding the challenges affecting the implementation of the AOPS as well as unpacked strategy implementation in literature. This aided with developing recommendation to assist with enhancing strategy implementation performance of the AOPS. The following recommendation were provided: Change management within DAFF, Branch Fisheries Management; Identify responsible structures and personnel in DAFF, Branch Fisheries Management; Developing communication platforms within DAFF, Branch Fisheries Management; Review of outcomes of AOPS; and Ensure commitment from all at DAFF, Branch Fisheries Management (leadership). The research paper presents a simple method of assessing the strategy implementation process through the use of a strategy implementation framework.
- Full Text:
- Authors: Halley, Keagan Desmond
- Date: 2019
- Subjects: Marine resources -- Government policy -- South Africa , Fishery management -- South Africa , Aquaculture -- South Africa , Aquaculture industry -- South Africa , Operation Phakisa (South Africa)
- Language: English
- Type: text , Thesis , Masters , MBA
- Identifier: http://hdl.handle.net/10962/93867 , vital:30964
- Description: The global demand in aquatic products has seen a number of fisheries depleted worldwide through increase fishing pressure and over exploitation. South Africa in itself has 52 fisheries that are being exploited, of which 48% of these fisheries are of concern, either depleted or heavily depleted. Countries around world have now taken on the responsibility to reduce the reliance on capture fisheries and move towards a more sustainable form of ensuring fish supply. A stabilisation of fisheries stock worldwide has seen the rise of aquaculture as alternative activity that would contribute to reducing pressure on the global fisheries stocks while feeding the demand for fish protein. Aquaculture has since almost equaled the capture based fish supply, contributing to 44.1% of the world’s total fisheries products in 2014 (FAO, 2016). Over the last few years the South African government has focused on developing the aquaculture sector through the development of strategies and policies. The most recent strategy launched in 2014 was Operation Phakisa: Unlocking the Economic Potential of South Africa’s Oceans. The approach of Operation Phakisa looked at accelerating the delivery of government development priorities pertaining to the oceans economy, through development of plans and collaboration of delivery through all stakeholders (public and private stakeholders). Operation Phakisa methodology included bringing key stakeholders within academia, private and public sector, as well as civil society organisations to work together and develop strategies with clear targets that would drive the growth of their specific sectors. The year 2017 marked the midway point of the five year strategy implementation time frame, and an opportunity to assess the performance of the strategy implementation. In order to assess performance of the strategy implementation, the strategy implementation framework developed by Okumus (2003) was identified. Okumus (2003) identifies 11 implementation factors and categorizes these into four categories in the strategy implementation process, based on their role and characteristics, namely: Strategic Content (development of strategy), Strategic Context (internal and external context), Operational Process (operational planning, resource allocation, people, communication, and control) and Outcome (results of implementations process) (Okumus, 2003). The research involved the reviewing of documentation based on the strategy implementation as well as facilitated semi-structure interviews with two stakeholder groups. This was to gain an understanding from the stakeholders’ perspective, on whether the Aquaculture Operation Phakisa Strategy (AOPS) is implemented according to Okumus (2003) Strategy Implementation Framework. Two stakeholder groups were interviewed, namely the officials implementing the strategy, and the aquaculture farmers being affected by the strategy implementation. The research found that eight of out of 11 factors from Okumus (2003) Strategy Implementation Framework were identified as being gaps within the implementation of the AOPS. These gaps were identified across all four main categories for strategy implementation (Strategic content, strategic context, operational process and outcomes). They included; strategy development, organisation structure, organisational culture, leadership, resource allocation, people, communication and outcomes. Furthermore, the researcher found that the perception from the officials differed to that of the aquaculture farmers, with the officials observing a more negative perception towards factors pertaining to organisational structure, organisational culture, leadership, resources allocated, people, communication and outcomes. This negative perception was experience towards the DAFF, Branch Fisheries Management as a whole, rather than within the officials own Chief Directorate (CD:AED), responsible for implementing the strategy. The research assisted with understanding the challenges affecting the implementation of the AOPS as well as unpacked strategy implementation in literature. This aided with developing recommendation to assist with enhancing strategy implementation performance of the AOPS. The following recommendation were provided: Change management within DAFF, Branch Fisheries Management; Identify responsible structures and personnel in DAFF, Branch Fisheries Management; Developing communication platforms within DAFF, Branch Fisheries Management; Review of outcomes of AOPS; and Ensure commitment from all at DAFF, Branch Fisheries Management (leadership). The research paper presents a simple method of assessing the strategy implementation process through the use of a strategy implementation framework.
- Full Text:
Asymmetrical and symmetrical zinc phthalocyanine-cobalt ferrite conjugates embedded in electrospun fibers for dual photocatalytic degradation of azo dyes: Methyl Orange and Orange G
- Mapukata, Sivuyisiwe, Kobayashi, Nagao, Kimura, Mutsumi, Nyokong, Tebello
- Authors: Mapukata, Sivuyisiwe , Kobayashi, Nagao , Kimura, Mutsumi , Nyokong, Tebello
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/186960 , vital:44551 , xlink:href="https://doi.org/10.1016/j.jphotochem.2019.04.048"
- Description: The conjugation of a symmetrical and an asymmetrical zinc phthalocyanine with amine functionalised cobalt ferrite magnetic nanoparticles (CoFe MNPs) for enhanced photophysics and photocatalysis is reported. The MNPs, 2-[5-(phenoxy)-isophthalic acid] 9(10), 16(17), 23(24)-tris (tertbutyl) phthalocyaninato Zn (II) (2) and 2, 10, 16, 24 – tetra 5-(phenoxy)-isophthalic acid phthalocyaninato] Zn (II) (3) as well as their respective conjugates are embedded into electrospun polyamide-6 (PA-6) fibers for support and catalyst regeneration. The resulting photocatalyts (CoFe/PA-6, 2/PA-6, 3/PA-6, CoFe-2/PA-6, and CoFe-3/PA-6) were compared based on their photophysical properties and photocatalytic efficiencies in degrading azo dyes; Methyl Orange (MO) and Orange G (OG). CoFe-2/PA-6 and CoFe-3/PA-6 were found to be more effective photocatalysts than their respective electrospun Pcs and MNPs. The degradation of OG was found to follow pseudo first order kinetics and the Langmuir–Hinshelwood model while that of MO does not.
- Full Text:
- Authors: Mapukata, Sivuyisiwe , Kobayashi, Nagao , Kimura, Mutsumi , Nyokong, Tebello
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/186960 , vital:44551 , xlink:href="https://doi.org/10.1016/j.jphotochem.2019.04.048"
- Description: The conjugation of a symmetrical and an asymmetrical zinc phthalocyanine with amine functionalised cobalt ferrite magnetic nanoparticles (CoFe MNPs) for enhanced photophysics and photocatalysis is reported. The MNPs, 2-[5-(phenoxy)-isophthalic acid] 9(10), 16(17), 23(24)-tris (tertbutyl) phthalocyaninato Zn (II) (2) and 2, 10, 16, 24 – tetra 5-(phenoxy)-isophthalic acid phthalocyaninato] Zn (II) (3) as well as their respective conjugates are embedded into electrospun polyamide-6 (PA-6) fibers for support and catalyst regeneration. The resulting photocatalyts (CoFe/PA-6, 2/PA-6, 3/PA-6, CoFe-2/PA-6, and CoFe-3/PA-6) were compared based on their photophysical properties and photocatalytic efficiencies in degrading azo dyes; Methyl Orange (MO) and Orange G (OG). CoFe-2/PA-6 and CoFe-3/PA-6 were found to be more effective photocatalysts than their respective electrospun Pcs and MNPs. The degradation of OG was found to follow pseudo first order kinetics and the Langmuir–Hinshelwood model while that of MO does not.
- Full Text:
Augmentative releases of Dactylopius austrinus De Lotto (Dactylopiidae; Hemiptera) for biological control of Opuntia aurantiaca Lindley (Cactaceae), in South Africa
- Authors: Mulateli, Thifhelimbilu
- Date: 2019
- Subjects: Opuntia aurantiaca -- Biolotical control -- South Africa , Invasive plants -- Biolotical control -- South Africa , Dactylopius austrinus De Lotto -- South Africa , Dactylopius -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/92931 , vital:30765
- Description: Opuntia aurantiaca Lindely (Cactaceae) is an invasive alien cactus which has detrimental effects on agroecosystems and indigenous biodiversity in South Africa. Dense infestations over large areas reduce grazing capacity and indigenous biodiversity. Despite the release of a biological control agent, the cochineal insect Dactylopius austrinus De Lotto (Dactylopiidae), the weed is still considered a major problem in many parts of the country. Biological control has relied heavily on classical biological control, with little augmentative biological control implemented. This study investigated the outcome of mass-rearing and augmentative releases of D. austrinus for the control of O. aurantiaca. Augmentative releases are thought to improve the level of control by increasing agent densities in the field and thus increasing the level of damage inflicted to the plants. All data were collected with the intention to optimize release strategies so that the maximum benefit from the biological control agent could be achieved. An impact study was conducted using potted plants in a greenhouse to quantify the efficacy of multiple releases of the agent on the target weed. All three of the release treatments showed consistently higher proportion of cochineal than the controls, as well as the insect exclusion treatments, and these differences were statistically significant. The number of cladodes per plant increased significantly for the insect exclusion and control treatment over the period of the study, whilst all three release treatments decreased steadily over the same period. This study indicated that the agent is damaging to O. aurantiaca and that a single release event was beneficial but that multiple releases did not result in greater levels of control. A post-release evaluation was carried out to quantify the impact of releases of D. austrinus on O. aurantiaca in the field. Plots where the agent was excluded were compared with those where the agent was left at natural field densities and three treatments where agent populations were augmented to varying degrees through releases. The percentage of cochineal infested cladodes for all treatments decreased over time from the initiation of the experiment in October 2017 until the end of the experiment in October 2018. Opuntia aurantiaca densities also decreased over time for all treatments. The insect exclusion treatment had the greatest number of plants for the duration of the study, but this was not significantly different from other treatments. Dactylopius austrinus was damaging to O. aurantiaca, but climatic conditions in the field limited the efficacy of releases. Although O. aurantiaca density decreased during the experiment, it was evident that the reduced number of plants was not due to augmentation of the cochineal populations from the releases that were conducted. The experiment was conducted over a very dry period, when cochineal was particularly effective, so although augmentative releases did not improve the level of control, the natural population of cochineal was high and very damaging to O. aurantiaca over the course of the experiment. Releasing during wet periods, when the agent is less effective, could augment agent populations at a time when natural populations would be low, and hence improve levels of control further. Although this study was limited to a short period of two years, the results of this study suggest that the number of releases is less important than the timing of releases. Releasing immediately after periods of high rainfall is likely to be beneficial, while releasing during dry periods, or during winter when temperatures are low, is less effective. Dactylopius austrinus populations should be constantly monitored so that releases can be conducted when cochineal populations are low and the climatic conditions are correct. If the timing of release events is appropriate, then the over level of control of O. aurantiaca using D. austrinus could be improved.
- Full Text:
- Authors: Mulateli, Thifhelimbilu
- Date: 2019
- Subjects: Opuntia aurantiaca -- Biolotical control -- South Africa , Invasive plants -- Biolotical control -- South Africa , Dactylopius austrinus De Lotto -- South Africa , Dactylopius -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/92931 , vital:30765
- Description: Opuntia aurantiaca Lindely (Cactaceae) is an invasive alien cactus which has detrimental effects on agroecosystems and indigenous biodiversity in South Africa. Dense infestations over large areas reduce grazing capacity and indigenous biodiversity. Despite the release of a biological control agent, the cochineal insect Dactylopius austrinus De Lotto (Dactylopiidae), the weed is still considered a major problem in many parts of the country. Biological control has relied heavily on classical biological control, with little augmentative biological control implemented. This study investigated the outcome of mass-rearing and augmentative releases of D. austrinus for the control of O. aurantiaca. Augmentative releases are thought to improve the level of control by increasing agent densities in the field and thus increasing the level of damage inflicted to the plants. All data were collected with the intention to optimize release strategies so that the maximum benefit from the biological control agent could be achieved. An impact study was conducted using potted plants in a greenhouse to quantify the efficacy of multiple releases of the agent on the target weed. All three of the release treatments showed consistently higher proportion of cochineal than the controls, as well as the insect exclusion treatments, and these differences were statistically significant. The number of cladodes per plant increased significantly for the insect exclusion and control treatment over the period of the study, whilst all three release treatments decreased steadily over the same period. This study indicated that the agent is damaging to O. aurantiaca and that a single release event was beneficial but that multiple releases did not result in greater levels of control. A post-release evaluation was carried out to quantify the impact of releases of D. austrinus on O. aurantiaca in the field. Plots where the agent was excluded were compared with those where the agent was left at natural field densities and three treatments where agent populations were augmented to varying degrees through releases. The percentage of cochineal infested cladodes for all treatments decreased over time from the initiation of the experiment in October 2017 until the end of the experiment in October 2018. Opuntia aurantiaca densities also decreased over time for all treatments. The insect exclusion treatment had the greatest number of plants for the duration of the study, but this was not significantly different from other treatments. Dactylopius austrinus was damaging to O. aurantiaca, but climatic conditions in the field limited the efficacy of releases. Although O. aurantiaca density decreased during the experiment, it was evident that the reduced number of plants was not due to augmentation of the cochineal populations from the releases that were conducted. The experiment was conducted over a very dry period, when cochineal was particularly effective, so although augmentative releases did not improve the level of control, the natural population of cochineal was high and very damaging to O. aurantiaca over the course of the experiment. Releasing during wet periods, when the agent is less effective, could augment agent populations at a time when natural populations would be low, and hence improve levels of control further. Although this study was limited to a short period of two years, the results of this study suggest that the number of releases is less important than the timing of releases. Releasing immediately after periods of high rainfall is likely to be beneficial, while releasing during dry periods, or during winter when temperatures are low, is less effective. Dactylopius austrinus populations should be constantly monitored so that releases can be conducted when cochineal populations are low and the climatic conditions are correct. If the timing of release events is appropriate, then the over level of control of O. aurantiaca using D. austrinus could be improved.
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Bait collecting by subsistence and recreational fishers in Knysna Estuary may impact management and conservation
- Simon, C, du Toit, A N, Smith, M K S, Claassens, Louw, Smith, F, Smith, P
- Authors: Simon, C , du Toit, A N , Smith, M K S , Claassens, Louw , Smith, F , Smith, P
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/447056 , vital:74581 , https://hdl.handle.net/10520/EJC-1d75666653
- Description: To facilitate development of tailored management strategies for bait species within Knysna Estuary (South Africa), demand for bait, harvesting activity and perceptions around conservation among recreational and subsistence bait fishers were investigated. In 2015 and 2016, bait collectors were interviewed (n = 84) and observed (n = 167) during low tides at six sites during peak and off-peak holiday periods. Significant associations among subsistence and recreational fishers and their favoured bait species, collecting spots and method, frequency of collection, views on regulations and desired daily limit for mudprawns suggest differences that may warrant different management strategies. Furthermore, observed methods and duration of bait collecting differed according to site, suggesting spatial variation in baiting pressures. Subsistence fishers potentially collect more mudprawns more frequently than do recreational fishers and consequently have a greater impact on mudprawn populations. By contrast, recreational fishers collect more polychaete worms, but because they are mainly active during holidays, their impact on these species may be localised and not yet critical. Most subsistence fishers would like increased daily bag limits, to sell bait and would welcome a rotational zonation scheme to replace the current permanent exclusion zone. The merits and disadvantages of these management options and suggestions are discussed.
- Full Text:
- Authors: Simon, C , du Toit, A N , Smith, M K S , Claassens, Louw , Smith, F , Smith, P
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/447056 , vital:74581 , https://hdl.handle.net/10520/EJC-1d75666653
- Description: To facilitate development of tailored management strategies for bait species within Knysna Estuary (South Africa), demand for bait, harvesting activity and perceptions around conservation among recreational and subsistence bait fishers were investigated. In 2015 and 2016, bait collectors were interviewed (n = 84) and observed (n = 167) during low tides at six sites during peak and off-peak holiday periods. Significant associations among subsistence and recreational fishers and their favoured bait species, collecting spots and method, frequency of collection, views on regulations and desired daily limit for mudprawns suggest differences that may warrant different management strategies. Furthermore, observed methods and duration of bait collecting differed according to site, suggesting spatial variation in baiting pressures. Subsistence fishers potentially collect more mudprawns more frequently than do recreational fishers and consequently have a greater impact on mudprawn populations. By contrast, recreational fishers collect more polychaete worms, but because they are mainly active during holidays, their impact on these species may be localised and not yet critical. Most subsistence fishers would like increased daily bag limits, to sell bait and would welcome a rotational zonation scheme to replace the current permanent exclusion zone. The merits and disadvantages of these management options and suggestions are discussed.
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Behaviour of an alpine range-restricted species is described by interactions between microsite use and temperature
- Oswald, Krista N, Smit, Ben, Lee, Alan T K, Cunningham, Susan J
- Authors: Oswald, Krista N , Smit, Ben , Lee, Alan T K , Cunningham, Susan J
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441531 , vital:73896 , https://doi.org/10.1016/j.anbehav.2019.09.006
- Description: Climate change predictions include increased mean temperatures and increased frequency of heatwaves. Short-term responses to high air temperatures can allow animals to conserve water while maintaining a safe body temperature. For birds, cooling is often through evaporative water loss, which can be physiologically costly. Microsite use is an effective means of conserving water via reducing environmental heat load, so long as there are no negative trade-offs with other necessary functions, such as foraging. We examined behavioural responses to temperature in Cape rockjumpers, Chaetops frenatus (hereafter: ‘rockjumper’), an alpine specialist bird. We hypothesized that rockjumper behaviours would be temperature and microsite dependent. We collected data on rockjumper microsite use (sun, rock shade), behaviour (activity, foraging, preening, panting) and temperature (air, environmental). Rockjumpers made increased use of rock shade as air temperature increased. However, birds in rock shade foraged less. Depending on where their main food source is located, this suggests that when foraging demands are high, birds may need to remain in the sun despite risks of high thermal load, or else may suffer costs of lost foraging opportunities when using shade. The relationship between air temperature and heat dissipation behaviour (panting) was also mediated by microsite: birds showed significant increases in panting with increasing air temperature only when in the sun. The lack of increase in panting for birds in rock shade suggests that shade seeking may buffer physiological thermoregulatory costs (i.e. water expenditure). Individuals may therefore be able to mitigate some potential negative effects of high temperatures by making use of cooler microsites, although this could come at a cost to foraging.
- Full Text:
- Authors: Oswald, Krista N , Smit, Ben , Lee, Alan T K , Cunningham, Susan J
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441531 , vital:73896 , https://doi.org/10.1016/j.anbehav.2019.09.006
- Description: Climate change predictions include increased mean temperatures and increased frequency of heatwaves. Short-term responses to high air temperatures can allow animals to conserve water while maintaining a safe body temperature. For birds, cooling is often through evaporative water loss, which can be physiologically costly. Microsite use is an effective means of conserving water via reducing environmental heat load, so long as there are no negative trade-offs with other necessary functions, such as foraging. We examined behavioural responses to temperature in Cape rockjumpers, Chaetops frenatus (hereafter: ‘rockjumper’), an alpine specialist bird. We hypothesized that rockjumper behaviours would be temperature and microsite dependent. We collected data on rockjumper microsite use (sun, rock shade), behaviour (activity, foraging, preening, panting) and temperature (air, environmental). Rockjumpers made increased use of rock shade as air temperature increased. However, birds in rock shade foraged less. Depending on where their main food source is located, this suggests that when foraging demands are high, birds may need to remain in the sun despite risks of high thermal load, or else may suffer costs of lost foraging opportunities when using shade. The relationship between air temperature and heat dissipation behaviour (panting) was also mediated by microsite: birds showed significant increases in panting with increasing air temperature only when in the sun. The lack of increase in panting for birds in rock shade suggests that shade seeking may buffer physiological thermoregulatory costs (i.e. water expenditure). Individuals may therefore be able to mitigate some potential negative effects of high temperatures by making use of cooler microsites, although this could come at a cost to foraging.
- Full Text: