An update on the indigenous vascular flora of sub-Antarctic Marion Island: taxonomic changes, sequences for DNA barcode loci, and genome size data
- Chau, John H, Mtsi, Nasipi I S, Münbergová, Zuzana, Greve, Michelle, le Roux, Peter C, Mairal, Mario, Le Roux, Johannes J, Dorrington, Rosemary A, van Vuuren, Bettine
- Authors: Chau, John H , Mtsi, Nasipi I S , Münbergová, Zuzana , Greve, Michelle , le Roux, Peter C , Mairal, Mario , Le Roux, Johannes J , Dorrington, Rosemary A , van Vuuren, Bettine
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160344 , vital:40437 , https://0-doi.org.wam.seals.ac.za/10.1007/s00300-020-02747-7
- Description: The flora of sub-Antarctic Marion Island forms part of the unique South Indian Ocean Biogeographic Province, and is under threat from climate change and invasive species. Current information on the flora is necessary to rapidly identify and manage future changes. We conducted a literature search on the taxonomy of indigenous vascular plant species on Marion Island and found nomenclatural changes following taxonomic revisions for Austroblechnum penna-marina (Poir.) Gasper and V.A.O.Dittrich, Carex dikei (Nelmes) K.L.Wilson, Leptinella plumosa Hook.f., Notogrammitis crassior (Kirk) Parris, Phlegmariurus saururus (Lam.) B.Øllg., and Polypogon magellanicus (Lam.) Finot. Additionally, Ranunculus moseleyi Hook.f. was removed from our species checklist due to its long absence in floristic surveys, leaving 21 species in the indigenous vascular plant flora present on Marion Island. We also amplified and sequenced the universal plant barcoding loci rbcL and matK for 19 and 13 species, respectively, and found that ample interspecific genetic distance and minimal intraspecific genetic distance allowed for easy discrimination between species.
- Full Text:
- Authors: Chau, John H , Mtsi, Nasipi I S , Münbergová, Zuzana , Greve, Michelle , le Roux, Peter C , Mairal, Mario , Le Roux, Johannes J , Dorrington, Rosemary A , van Vuuren, Bettine
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160344 , vital:40437 , https://0-doi.org.wam.seals.ac.za/10.1007/s00300-020-02747-7
- Description: The flora of sub-Antarctic Marion Island forms part of the unique South Indian Ocean Biogeographic Province, and is under threat from climate change and invasive species. Current information on the flora is necessary to rapidly identify and manage future changes. We conducted a literature search on the taxonomy of indigenous vascular plant species on Marion Island and found nomenclatural changes following taxonomic revisions for Austroblechnum penna-marina (Poir.) Gasper and V.A.O.Dittrich, Carex dikei (Nelmes) K.L.Wilson, Leptinella plumosa Hook.f., Notogrammitis crassior (Kirk) Parris, Phlegmariurus saururus (Lam.) B.Øllg., and Polypogon magellanicus (Lam.) Finot. Additionally, Ranunculus moseleyi Hook.f. was removed from our species checklist due to its long absence in floristic surveys, leaving 21 species in the indigenous vascular plant flora present on Marion Island. We also amplified and sequenced the universal plant barcoding loci rbcL and matK for 19 and 13 species, respectively, and found that ample interspecific genetic distance and minimal intraspecific genetic distance allowed for easy discrimination between species.
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Enhanced photodynamic antimicrobial activity of surface modified SiNPs doped with zinc (II) phthalocyanines: the effect of antimicrobial ampicillin and extra charges from a sultone
- Magadla, Aviwe, Nyokong, Tebello
- Authors: Magadla, Aviwe , Nyokong, Tebello
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160511 , vital:40452 , https://doi.org/10.1016/j.pdpdt.2020.101996
- Description: 1-(2-Methoxyethyl)piperidine sustituted Zn phthalocyanine complex (2) is synthesised and quartenised (3). These complexes are loaded into silica nanoparticles (SiNPs) that are futher surface modified with ampicillin and 1.3-propanesultone. The photophysical and photochemical properties of the complexes and their doped conjugates were investigated in dimethylsulfoxide. The cationic complex (3) is used for photodynamic antimicrobial activity. Log reduction values of above 9 are obtained towards the photoiactivation of Staphyloccocus aureus.
- Full Text:
- Authors: Magadla, Aviwe , Nyokong, Tebello
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160511 , vital:40452 , https://doi.org/10.1016/j.pdpdt.2020.101996
- Description: 1-(2-Methoxyethyl)piperidine sustituted Zn phthalocyanine complex (2) is synthesised and quartenised (3). These complexes are loaded into silica nanoparticles (SiNPs) that are futher surface modified with ampicillin and 1.3-propanesultone. The photophysical and photochemical properties of the complexes and their doped conjugates were investigated in dimethylsulfoxide. The cationic complex (3) is used for photodynamic antimicrobial activity. Log reduction values of above 9 are obtained towards the photoiactivation of Staphyloccocus aureus.
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Retracted COVID-19 Papers and the level of 'citation pollution': a preliminary analysis and directions for future research
- Van der Walt, Wynand, Willems, Kris A, Friedrich, Wernher, Hatsu, Sylvester, Krauss, Kirstin
- Authors: Van der Walt, Wynand , Willems, Kris A , Friedrich, Wernher , Hatsu, Sylvester , Krauss, Kirstin
- Date: 2020
- Subjects: Retraction watch , Research -- Evaluation , Bibliographical citations -- Evaluation , Science publishing -- Corrupt practices , Scholarly publishing -- Corrupt practices , Learning and scholarship -- Corrupt practices , Medical publishing -- Corrupt practices , COVID-19 (Disease) -- Publishing
- Language: English
- Type: Article , text
- Identifier: http://hdl.handle.net/10962/167732 , vital:41508 , https://www.abd-bvd.be/nl/bladen-voor-documentatie/2020-3-4/
- Description: Retraction Watch maintains a "running list" of retracted papers on Covid-19 related research. By the end of September 2020, thirty-three retracted Covid-19 papers were listed. We analysed these retracted papers, focusing specifically on how they have been cited by review papers, and subsequently how they have penetrated and potentially distorted public discourse and legitimate research on Covid-19. The study demonstrates the need for more in-depth studies that focus on the phenomenon of citation pollution. We show that the "Covid-19 publication race", amplified by a pressure-to-publish research culture, distorted published science on Covid-19. We highlight the urgency to engage popular media and critical decision makers on how to distinguish between questionable and legitimate science. We also emphasise the importance of dealing with illegitimate research in a timely manner, both from a scholarly communications and research quality perspective. , Retraction Watch maintient une "liste courante" des articles rétractés sur les recherches liées au Covid-19. Fin septembre 2020, trente-trois articles rétractés sur le Covid-19 étaient répertoriés. Nous avons analysé ces articles rétractés, en nous concentrant spécifiquement sur la façon dont ils ont été cités par d'autres articles, et ensuite sur la façon dont ils ont pénétré et potentiellement faussé le discours public et la recherche légitime sur le Covid-19. L'étude démontre le besoin d'études plus approfondies qui se concentrent sur le phénomène de la pollution des citations. Nous montrons que la "course à la publication sur le Covid-19", amplifiée par une culture de la pression à la publication de la recherche, a déformé l'information scientifique publiée sur le Covid-19. Nous soulignons l'urgence d'engager les médias populaires et les décideurs critiques sur la manière de distinguer la science douteuse de la science légitime. Nous soulignons également l'importance de traiter rapidement les recherches illégitimes, tant du point de vue de la communication scientifique que de la qualité de la recherche. , Retraction Watch houdt een "lopende lijst" bij van ingetrokken papieren over Covid-19-gerelateerd onderzoek. Eind september 2020 waren drieëndertig ingetrokken Covid-19 papieren op de lijst geplaatst. We hebben deze ingetrokken papieren geanalyseerd, waarbij we ons specifiek hebben gericht op de manier waarop ze zijn geciteerd door review papers, en vervolgens op de manier waarop ze zijn doorgedrongen en mogelijk vervormd in het publieke discours en het legitieme onderzoek naar Covid-19. De studie toont aan dat er behoefte is aan meer diepgaande studies die zich richten op het fenomeen van de citatievervuiling. We tonen aan dat de "Covid-19-publicatierace", versterkt door een druk om te publiceren onderzoekscultuur, de gepubliceerde wetenschap over Covid-19 vertekend heeft. We benadrukken de urgentie om de populaire media en kritische besluitvormers te betrekken bij het maken van een onderscheid tussen twijfelachtige en legitieme wetenschap. We benadrukken ook het belang van het tijdig aanpakken van onrechtmatig onderzoek, zowel vanuit het oogpunt van wetenschappelijke communicatie als vanuit het oogpunt van de kwaliteit van het onderzoek.
- Full Text:
- Authors: Van der Walt, Wynand , Willems, Kris A , Friedrich, Wernher , Hatsu, Sylvester , Krauss, Kirstin
- Date: 2020
- Subjects: Retraction watch , Research -- Evaluation , Bibliographical citations -- Evaluation , Science publishing -- Corrupt practices , Scholarly publishing -- Corrupt practices , Learning and scholarship -- Corrupt practices , Medical publishing -- Corrupt practices , COVID-19 (Disease) -- Publishing
- Language: English
- Type: Article , text
- Identifier: http://hdl.handle.net/10962/167732 , vital:41508 , https://www.abd-bvd.be/nl/bladen-voor-documentatie/2020-3-4/
- Description: Retraction Watch maintains a "running list" of retracted papers on Covid-19 related research. By the end of September 2020, thirty-three retracted Covid-19 papers were listed. We analysed these retracted papers, focusing specifically on how they have been cited by review papers, and subsequently how they have penetrated and potentially distorted public discourse and legitimate research on Covid-19. The study demonstrates the need for more in-depth studies that focus on the phenomenon of citation pollution. We show that the "Covid-19 publication race", amplified by a pressure-to-publish research culture, distorted published science on Covid-19. We highlight the urgency to engage popular media and critical decision makers on how to distinguish between questionable and legitimate science. We also emphasise the importance of dealing with illegitimate research in a timely manner, both from a scholarly communications and research quality perspective. , Retraction Watch maintient une "liste courante" des articles rétractés sur les recherches liées au Covid-19. Fin septembre 2020, trente-trois articles rétractés sur le Covid-19 étaient répertoriés. Nous avons analysé ces articles rétractés, en nous concentrant spécifiquement sur la façon dont ils ont été cités par d'autres articles, et ensuite sur la façon dont ils ont pénétré et potentiellement faussé le discours public et la recherche légitime sur le Covid-19. L'étude démontre le besoin d'études plus approfondies qui se concentrent sur le phénomène de la pollution des citations. Nous montrons que la "course à la publication sur le Covid-19", amplifiée par une culture de la pression à la publication de la recherche, a déformé l'information scientifique publiée sur le Covid-19. Nous soulignons l'urgence d'engager les médias populaires et les décideurs critiques sur la manière de distinguer la science douteuse de la science légitime. Nous soulignons également l'importance de traiter rapidement les recherches illégitimes, tant du point de vue de la communication scientifique que de la qualité de la recherche. , Retraction Watch houdt een "lopende lijst" bij van ingetrokken papieren over Covid-19-gerelateerd onderzoek. Eind september 2020 waren drieëndertig ingetrokken Covid-19 papieren op de lijst geplaatst. We hebben deze ingetrokken papieren geanalyseerd, waarbij we ons specifiek hebben gericht op de manier waarop ze zijn geciteerd door review papers, en vervolgens op de manier waarop ze zijn doorgedrongen en mogelijk vervormd in het publieke discours en het legitieme onderzoek naar Covid-19. De studie toont aan dat er behoefte is aan meer diepgaande studies die zich richten op het fenomeen van de citatievervuiling. We tonen aan dat de "Covid-19-publicatierace", versterkt door een druk om te publiceren onderzoekscultuur, de gepubliceerde wetenschap over Covid-19 vertekend heeft. We benadrukken de urgentie om de populaire media en kritische besluitvormers te betrekken bij het maken van een onderscheid tussen twijfelachtige en legitieme wetenschap. We benadrukken ook het belang van het tijdig aanpakken van onrechtmatig onderzoek, zowel vanuit het oogpunt van wetenschappelijke communicatie als vanuit het oogpunt van de kwaliteit van het onderzoek.
- Full Text:
The small pelagic fishery of the Pemba Channel, Tanzania: what we know and what we need to know for management under climate change
- Sekadende, Baraka, Scott, Lucy E P, Anderson, Jim, Aswani, Shankar, Francis, Julius, Jacobs, Zoe, Jebri, Fatma, Jiddawi, Narriman, Kamukuru, Albogast T, Kelly, Stephen, Kizenga, Hellen, Kuguru, Baraka, Kyewalyanga, Margareth, Noyon, Margaux, Nyandwi, Ntahondi, Painter, Stuart C, Palmer, Matthew, Raitsos, Dionysios, Roberts, Michael J, Sailley, Sévrine F, Samoilys, Melita, Sauer, Warwick H H, Shayo, Salome, Shaghude, Yohana, Taylor, Sarah F W, Wihsgott, Juliane U, Ekaterina Popova
- Authors: Sekadende, Baraka , Scott, Lucy E P , Anderson, Jim , Aswani, Shankar , Francis, Julius , Jacobs, Zoe , Jebri, Fatma , Jiddawi, Narriman , Kamukuru, Albogast T , Kelly, Stephen , Kizenga, Hellen , Kuguru, Baraka , Kyewalyanga, Margareth , Noyon, Margaux , Nyandwi, Ntahondi , Painter, Stuart C , Palmer, Matthew , Raitsos, Dionysios , Roberts, Michael J , Sailley, Sévrine F , Samoilys, Melita , Sauer, Warwick H H , Shayo, Salome , Shaghude, Yohana , Taylor, Sarah F W , Wihsgott, Juliane U , Ekaterina Popova
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/178986 , vital:40102 , https://doi.org/10.1016/j.ocecoaman.2020.105322
- Description: Small pelagic fish, including anchovies, sardines and sardinellas, mackerels, capelin, hilsa, sprats and herrings, are distributed widely, from the tropics to the far north Atlantic Ocean and to the southern oceans off Chile and South Africa. They are most abundant in the highly productive major eastern boundary upwelling systems and are characterised by significant natural variations in biomass. Overall, small pelagic fisheries represent about one third of global fish landings although a large proportion of the catch is processed into animal feeds. Nonetheless, in some developing countries in addition to their economic value, small pelagic fisheries also make an important contribution to human diets and the food security of many low-income households. Such is the case for many communities in the Zanzibar Archipelago and on mainland Tanzania in the Western Indian Ocean. Of great concern in this region, as elsewhere, is the potential impact of climate change on marine and coastal ecosystems in general, and on small pelagic fisheries in particular. This paper describes data and information available on Tanzania's small pelagic fisheries, including catch and effort, management protocols and socio-economic significance.
- Full Text:
- Authors: Sekadende, Baraka , Scott, Lucy E P , Anderson, Jim , Aswani, Shankar , Francis, Julius , Jacobs, Zoe , Jebri, Fatma , Jiddawi, Narriman , Kamukuru, Albogast T , Kelly, Stephen , Kizenga, Hellen , Kuguru, Baraka , Kyewalyanga, Margareth , Noyon, Margaux , Nyandwi, Ntahondi , Painter, Stuart C , Palmer, Matthew , Raitsos, Dionysios , Roberts, Michael J , Sailley, Sévrine F , Samoilys, Melita , Sauer, Warwick H H , Shayo, Salome , Shaghude, Yohana , Taylor, Sarah F W , Wihsgott, Juliane U , Ekaterina Popova
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/178986 , vital:40102 , https://doi.org/10.1016/j.ocecoaman.2020.105322
- Description: Small pelagic fish, including anchovies, sardines and sardinellas, mackerels, capelin, hilsa, sprats and herrings, are distributed widely, from the tropics to the far north Atlantic Ocean and to the southern oceans off Chile and South Africa. They are most abundant in the highly productive major eastern boundary upwelling systems and are characterised by significant natural variations in biomass. Overall, small pelagic fisheries represent about one third of global fish landings although a large proportion of the catch is processed into animal feeds. Nonetheless, in some developing countries in addition to their economic value, small pelagic fisheries also make an important contribution to human diets and the food security of many low-income households. Such is the case for many communities in the Zanzibar Archipelago and on mainland Tanzania in the Western Indian Ocean. Of great concern in this region, as elsewhere, is the potential impact of climate change on marine and coastal ecosystems in general, and on small pelagic fisheries in particular. This paper describes data and information available on Tanzania's small pelagic fisheries, including catch and effort, management protocols and socio-economic significance.
- Full Text:
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