Drowning in data, thirsty for information and starved for understanding: A biodiversity information hub for cooperative environmental monitoring in South Africa
- MacFadyen, Sandra, Allsopp, Nicky, Altwegg, Res, Archibald, Sally, Botha, Judith, Bradshaw, Karen L, Carruthers, Jane, De Klerk, Helen, de Vos, Alta, Distiller, Greg, Foord, Stefan, Freitag-Ronaldson, Stefanie, Gibbs, Richard, Hamer, Michelle, Landi, Pietro, MacFayden, Duncan, Manuel, Jeffrey, Midgley, Guy, Moncrieff, Glenn, Munch, Zahn, Mutanga, Onisimo, Sershen, Nenguda, Rendani, Ngwenya, Mzabalazo, Parker, Daniel M, Peel, Mike, Power, John, Pretorius, Joachim, Ramdhani, Syd, Robertson, Mark P, Rushworth, Ian, Skowno, Andrew, Slingsby, Jasper, Turner, Andrew, Visser, Vernon, van Wageningen, Gerhard, Hui, Cang
- Authors: MacFadyen, Sandra , Allsopp, Nicky , Altwegg, Res , Archibald, Sally , Botha, Judith , Bradshaw, Karen L , Carruthers, Jane , De Klerk, Helen , de Vos, Alta , Distiller, Greg , Foord, Stefan , Freitag-Ronaldson, Stefanie , Gibbs, Richard , Hamer, Michelle , Landi, Pietro , MacFayden, Duncan , Manuel, Jeffrey , Midgley, Guy , Moncrieff, Glenn , Munch, Zahn , Mutanga, Onisimo , Sershen , Nenguda, Rendani , Ngwenya, Mzabalazo , Parker, Daniel M , Peel, Mike , Power, John , Pretorius, Joachim , Ramdhani, Syd , Robertson, Mark P , Rushworth, Ian , Skowno, Andrew , Slingsby, Jasper , Turner, Andrew , Visser, Vernon , van Wageningen, Gerhard , Hui, Cang
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/415624 , vital:71271 , xlink:href="https://doi.org/10.1016/j.biocon.2022.109736"
- Description: The world is firmly cemented in a notitian age (Latin: notitia, meaning data) – drowning in data, yet thirsty for information and the synthesis of knowledge into understanding. As concerns over biodiversity declines escalate, the volume, diversity and speed at which new environmental and ecological data are generated has increased exponentially. Data availability primes the research and discovery engine driving biodiversity conservation. South Africa (SA) is poised to become a world leader in biodiversity conservation. However, continent-wide resource limitations hamper the establishment of inclusive technologies and robust platforms and tools for biodiversity informatics. In this perspectives piece, we bring together the opinions of 37 co-authors from 20 different departments, across 10 SA universities, 7 national and provincial conservation research agencies, and various institutes and private conservation, research and management bodies, to develop a way forward for biodiversity informatics in SA. We propose the development of a SA Biodiversity Informatics Hub and describe the essential components necessary for its design, implementation and sustainability. We emphasise the importance of developing a culture of cooperation, collaboration and interoperability among custodians of biodiversity data to establish operational workflows for data synthesis. However, our biggest challenges are misgivings around data sharing and multidisciplinary collaboration.
- Full Text:
- Authors: MacFadyen, Sandra , Allsopp, Nicky , Altwegg, Res , Archibald, Sally , Botha, Judith , Bradshaw, Karen L , Carruthers, Jane , De Klerk, Helen , de Vos, Alta , Distiller, Greg , Foord, Stefan , Freitag-Ronaldson, Stefanie , Gibbs, Richard , Hamer, Michelle , Landi, Pietro , MacFayden, Duncan , Manuel, Jeffrey , Midgley, Guy , Moncrieff, Glenn , Munch, Zahn , Mutanga, Onisimo , Sershen , Nenguda, Rendani , Ngwenya, Mzabalazo , Parker, Daniel M , Peel, Mike , Power, John , Pretorius, Joachim , Ramdhani, Syd , Robertson, Mark P , Rushworth, Ian , Skowno, Andrew , Slingsby, Jasper , Turner, Andrew , Visser, Vernon , van Wageningen, Gerhard , Hui, Cang
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/415624 , vital:71271 , xlink:href="https://doi.org/10.1016/j.biocon.2022.109736"
- Description: The world is firmly cemented in a notitian age (Latin: notitia, meaning data) – drowning in data, yet thirsty for information and the synthesis of knowledge into understanding. As concerns over biodiversity declines escalate, the volume, diversity and speed at which new environmental and ecological data are generated has increased exponentially. Data availability primes the research and discovery engine driving biodiversity conservation. South Africa (SA) is poised to become a world leader in biodiversity conservation. However, continent-wide resource limitations hamper the establishment of inclusive technologies and robust platforms and tools for biodiversity informatics. In this perspectives piece, we bring together the opinions of 37 co-authors from 20 different departments, across 10 SA universities, 7 national and provincial conservation research agencies, and various institutes and private conservation, research and management bodies, to develop a way forward for biodiversity informatics in SA. We propose the development of a SA Biodiversity Informatics Hub and describe the essential components necessary for its design, implementation and sustainability. We emphasise the importance of developing a culture of cooperation, collaboration and interoperability among custodians of biodiversity data to establish operational workflows for data synthesis. However, our biggest challenges are misgivings around data sharing and multidisciplinary collaboration.
- Full Text:
Soil biota in a megadiverse country current knowledge and future research directions in South Africa
- Janion-Scheepers, Charlene, Measey, John, Braschler, Brigitte, Chown, Steven L, Coetzee, Louisee, Colville, Jonathan F, Dames, Joanna F, Davies, Andrew B, Davies, Sarah J, Davis, Adrian L V, Dippenaar-Schoeman, Ansi S, Duffy, Grant A, Fouries, Driekie, Griffiths, Charles, Haddad, Charles R, Hamer, Michelle, Herbert, David G, Hugo-Coetzee, Elizabeth A, Jacobs, Adriaanas, Jacobs, Karin, Jansen van Rensburg, Candice, Lamani, Siviwe, Lotz, Leon N, vdm Louw, Schalk, Lyle, Robin, Malan, Antoinette P, Marais, Mariette, Neethling, Jan-Andries, Nxele, Thembeka, Plisko, Danuta J, Prendini, Lorenzo, Rink, Ariella N, Swart, Antionette, Theron, Pieter, Truter, Mariette, Ueckermnn, Eddie, Uys, Vivienne M, Villet, Martin H, Willows-Munro, Sandy, Wilson, R U
- Authors: Janion-Scheepers, Charlene , Measey, John , Braschler, Brigitte , Chown, Steven L , Coetzee, Louisee , Colville, Jonathan F , Dames, Joanna F , Davies, Andrew B , Davies, Sarah J , Davis, Adrian L V , Dippenaar-Schoeman, Ansi S , Duffy, Grant A , Fouries, Driekie , Griffiths, Charles , Haddad, Charles R , Hamer, Michelle , Herbert, David G , Hugo-Coetzee, Elizabeth A , Jacobs, Adriaanas , Jacobs, Karin , Jansen van Rensburg, Candice , Lamani, Siviwe , Lotz, Leon N , vdm Louw, Schalk , Lyle, Robin , Malan, Antoinette P , Marais, Mariette , Neethling, Jan-Andries , Nxele, Thembeka , Plisko, Danuta J , Prendini, Lorenzo , Rink, Ariella N , Swart, Antionette , Theron, Pieter , Truter, Mariette , Ueckermnn, Eddie , Uys, Vivienne M , Villet, Martin H , Willows-Munro, Sandy , Wilson, R U
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448682 , vital:74751 , https://doi.org/10.1016/j.pedobi.2016.03.004
- Description: Soils are integral to agricultural productivity, biodiversity, and the maintenance of ecosystem services. However, soil ecosystem research depends on foundational biological knowledge that is often missing. In this review, we present a comprehensive, cross-taxa overview of the soil biota of South Africa. We discuss the literature and sampling methods used to assess soil biota, the available taxonomic expertise and main collections within South Africa, the availability of identification guides and online resources, and the status and distribution of described species. We include species lists for all South African soil biota and, for groups with sufficient distribution records, species richness maps. Despite South Africa being only 0.8% of the earth’s terrestrial area, it contains nearly 1.8% of the world’s described soil species (mean per taxon 3.64%, range 0.17–15%; n = 36 groups), with nematodes and earthworms showing a remarkable (6.4 and 7.7%) proportion of globally described diversity. Endemism is high for most groups, ranging from 33–92%. However, major knowledge gaps exist for most soil biota groups. While sampling has been relatively comprehensive in some areas for a few groups (particularly those with direct socioeconomic impacts), the Nama-Karoo, Northern Cape and Eastern Cape are poorly sampled. Natural soils in biodiversity hotspots, such as the Fynbos Biome, are also understudied. We argue that a more integrative approach to acquiring foundational knowledge in soil biodiversity is needed if applied soil research is to be effective in ensuring sustainable soil health. Considerable investment will be required to bring our understanding of the soil biodiversity in this megadiverse region to a level where the Millennium Development Goals can be reached.
- Full Text:
Soil biota in a megadiverse country current knowledge and future research directions in South Africa
- Authors: Janion-Scheepers, Charlene , Measey, John , Braschler, Brigitte , Chown, Steven L , Coetzee, Louisee , Colville, Jonathan F , Dames, Joanna F , Davies, Andrew B , Davies, Sarah J , Davis, Adrian L V , Dippenaar-Schoeman, Ansi S , Duffy, Grant A , Fouries, Driekie , Griffiths, Charles , Haddad, Charles R , Hamer, Michelle , Herbert, David G , Hugo-Coetzee, Elizabeth A , Jacobs, Adriaanas , Jacobs, Karin , Jansen van Rensburg, Candice , Lamani, Siviwe , Lotz, Leon N , vdm Louw, Schalk , Lyle, Robin , Malan, Antoinette P , Marais, Mariette , Neethling, Jan-Andries , Nxele, Thembeka , Plisko, Danuta J , Prendini, Lorenzo , Rink, Ariella N , Swart, Antionette , Theron, Pieter , Truter, Mariette , Ueckermnn, Eddie , Uys, Vivienne M , Villet, Martin H , Willows-Munro, Sandy , Wilson, R U
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448682 , vital:74751 , https://doi.org/10.1016/j.pedobi.2016.03.004
- Description: Soils are integral to agricultural productivity, biodiversity, and the maintenance of ecosystem services. However, soil ecosystem research depends on foundational biological knowledge that is often missing. In this review, we present a comprehensive, cross-taxa overview of the soil biota of South Africa. We discuss the literature and sampling methods used to assess soil biota, the available taxonomic expertise and main collections within South Africa, the availability of identification guides and online resources, and the status and distribution of described species. We include species lists for all South African soil biota and, for groups with sufficient distribution records, species richness maps. Despite South Africa being only 0.8% of the earth’s terrestrial area, it contains nearly 1.8% of the world’s described soil species (mean per taxon 3.64%, range 0.17–15%; n = 36 groups), with nematodes and earthworms showing a remarkable (6.4 and 7.7%) proportion of globally described diversity. Endemism is high for most groups, ranging from 33–92%. However, major knowledge gaps exist for most soil biota groups. While sampling has been relatively comprehensive in some areas for a few groups (particularly those with direct socioeconomic impacts), the Nama-Karoo, Northern Cape and Eastern Cape are poorly sampled. Natural soils in biodiversity hotspots, such as the Fynbos Biome, are also understudied. We argue that a more integrative approach to acquiring foundational knowledge in soil biodiversity is needed if applied soil research is to be effective in ensuring sustainable soil health. Considerable investment will be required to bring our understanding of the soil biodiversity in this megadiverse region to a level where the Millennium Development Goals can be reached.
- Full Text:
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