Advantages of using development models of the carrion beetles Thanatophilus micans (Fabricius) and T. mutilatus (Castelneau)(Coleoptera Silphidae) for estimating minimum post mortem intervals, verified with case data
- Ridgeway, Jaryd A, Midgley, John M, Collett, Isabel J, Villet, Martin H
- Authors: Ridgeway, Jaryd A , Midgley, John M , Collett, Isabel J , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441737 , vital:73911 , https://doi.org/10.1007/s00414-013-0865-0
- Description: Some beetles are as useful as blow flies for estimating the minimum post mortem interval (PMImin) or time since death. Examples include Thanatophilus micans (Fabricius) and Thanatophilus mutilatus (Castelneau), two geographically and ecologically overlapping African beetles. Molecular means of identifying these species, descriptions of their natural history, thermal summation models for the development of each species, and a case in which T. micans was recovered are presented. These beetles colonise bodies soon after death, their development spans more time than that of flies, and they may be little affected by maggot-generated heat. From an experimental perspective, they can be reared individually, which allows the identification of sick individuals and has analytical advantages relative to fly larvae that must be reared in groups. Estimating minimum post mortem intervals for both species using the case data strongly suggests that developmental models parameterised for one species should not be used to make forensic estimates for closely related species for which no specific model is available and emphasises the need for correct identifications.
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- Authors: Ridgeway, Jaryd A , Midgley, John M , Collett, Isabel J , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441737 , vital:73911 , https://doi.org/10.1007/s00414-013-0865-0
- Description: Some beetles are as useful as blow flies for estimating the minimum post mortem interval (PMImin) or time since death. Examples include Thanatophilus micans (Fabricius) and Thanatophilus mutilatus (Castelneau), two geographically and ecologically overlapping African beetles. Molecular means of identifying these species, descriptions of their natural history, thermal summation models for the development of each species, and a case in which T. micans was recovered are presented. These beetles colonise bodies soon after death, their development spans more time than that of flies, and they may be little affected by maggot-generated heat. From an experimental perspective, they can be reared individually, which allows the identification of sick individuals and has analytical advantages relative to fly larvae that must be reared in groups. Estimating minimum post mortem intervals for both species using the case data strongly suggests that developmental models parameterised for one species should not be used to make forensic estimates for closely related species for which no specific model is available and emphasises the need for correct identifications.
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Climate change effects on animal and plant phylogenetic diversity in southern Africa
- Pio, Dorothea V, Engler, Robin, Linder, H Peter, Monadjem, Ara, Cotterill, Fenton P D, Taylor, Peter J, Schoeman, M Corrie, Price, Benjamin W, Villet, Martin H, Eick, Geeta, Salamin, Nicholas, Guisan, Antoine
- Authors: Pio, Dorothea V , Engler, Robin , Linder, H Peter , Monadjem, Ara , Cotterill, Fenton P D , Taylor, Peter J , Schoeman, M Corrie , Price, Benjamin W , Villet, Martin H , Eick, Geeta , Salamin, Nicholas , Guisan, Antoine
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441874 , vital:73930 , https://doi.org/10.1111/gcb.12524
- Description: Much attention has been paid to the effects of climate change on species' range reductions and extinctions. There is however surprisingly little information on how climate change driven threat may impact the tree of life and result in loss of phylogenetic diversity (PD). Some plant families and mammalian orders reveal nonrandom extinction patterns, but many other plant families do not. Do these discrepancies reflect different speciation histories and does climate induced extinction result in the same discrepancies among different groups? Answers to these questions require representative taxon sampling. Here, we combine phylogenetic analyses, species distribution modeling, and climate change projections on two of the largest plant families in the Cape Floristic Region (Proteaceae and Restionaceae), as well as the second most diverse mammalian order in Southern Africa (Chiroptera), and an herbivorous insect genus (Platypleura) in the family Cicadidae to answer this question. We model current and future species distributions to assess species threat levels over the next 70 years, and then compare projected with random PD survival. Results for these animal and plant clades reveal congruence. PD losses are not significantly higher under predicted extinction than under random extinction simulations. So far the evidence suggests that focusing resources on climate threatened species alone may not result in disproportionate benefits for the preservation of evolutionary history.
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- Authors: Pio, Dorothea V , Engler, Robin , Linder, H Peter , Monadjem, Ara , Cotterill, Fenton P D , Taylor, Peter J , Schoeman, M Corrie , Price, Benjamin W , Villet, Martin H , Eick, Geeta , Salamin, Nicholas , Guisan, Antoine
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441874 , vital:73930 , https://doi.org/10.1111/gcb.12524
- Description: Much attention has been paid to the effects of climate change on species' range reductions and extinctions. There is however surprisingly little information on how climate change driven threat may impact the tree of life and result in loss of phylogenetic diversity (PD). Some plant families and mammalian orders reveal nonrandom extinction patterns, but many other plant families do not. Do these discrepancies reflect different speciation histories and does climate induced extinction result in the same discrepancies among different groups? Answers to these questions require representative taxon sampling. Here, we combine phylogenetic analyses, species distribution modeling, and climate change projections on two of the largest plant families in the Cape Floristic Region (Proteaceae and Restionaceae), as well as the second most diverse mammalian order in Southern Africa (Chiroptera), and an herbivorous insect genus (Platypleura) in the family Cicadidae to answer this question. We model current and future species distributions to assess species threat levels over the next 70 years, and then compare projected with random PD survival. Results for these animal and plant clades reveal congruence. PD losses are not significantly higher under predicted extinction than under random extinction simulations. So far the evidence suggests that focusing resources on climate threatened species alone may not result in disproportionate benefits for the preservation of evolutionary history.
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IziNambuzane: isiZulu names for insects
- Cockburn, Jessica J, Khumalo-Seegelken, B, Villet, Martin H
- Authors: Cockburn, Jessica J , Khumalo-Seegelken, B , Villet, Martin H
- Date: 2014
- Subjects: Insects -- South Africa -- KwaZulu-Natal -- Nomenclature , Zulu language -- Revival , Language policy -- South Africa -- KwaZulu-Natal , Native language and education -- Research -- South Africa -- KwaZulu-Natal , Ethnoentomology
- Language: English
- Type: Article
- Identifier: vital:6972 , http://hdl.handle.net/10962/d1014581
- Description: We provide a tool for communicating about insects in isiZulu to facilitate research and knowledge sharing in the fields of indigenous knowledge, cultural entomology, environmental education and community extensioninvolving isiZulu speakers. A total of 213 different names for 64 insect specimens were encountered among a sample of 67 respondents in 11 communities distributed across the province of KwaZulu-Natal, South Africa. This list includes 93 names that can be considered core isiZulu vocabulary and which are widely used to identify insects that are agriculturally, medically, domestically, culturally or ecologically common or significant. Substantial variation was found regarding the names for particular insects, especially between regions, suggesting dialectal differences between isiZulu speakers. Grammatical and social variation in names was also recorded. This study highlights interdisciplinary teamwork in the field of indigenous knowledge research and the influences affecting the standardisation of South African languages for technical and scientific work.
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- Authors: Cockburn, Jessica J , Khumalo-Seegelken, B , Villet, Martin H
- Date: 2014
- Subjects: Insects -- South Africa -- KwaZulu-Natal -- Nomenclature , Zulu language -- Revival , Language policy -- South Africa -- KwaZulu-Natal , Native language and education -- Research -- South Africa -- KwaZulu-Natal , Ethnoentomology
- Language: English
- Type: Article
- Identifier: vital:6972 , http://hdl.handle.net/10962/d1014581
- Description: We provide a tool for communicating about insects in isiZulu to facilitate research and knowledge sharing in the fields of indigenous knowledge, cultural entomology, environmental education and community extensioninvolving isiZulu speakers. A total of 213 different names for 64 insect specimens were encountered among a sample of 67 respondents in 11 communities distributed across the province of KwaZulu-Natal, South Africa. This list includes 93 names that can be considered core isiZulu vocabulary and which are widely used to identify insects that are agriculturally, medically, domestically, culturally or ecologically common or significant. Substantial variation was found regarding the names for particular insects, especially between regions, suggesting dialectal differences between isiZulu speakers. Grammatical and social variation in names was also recorded. This study highlights interdisciplinary teamwork in the field of indigenous knowledge research and the influences affecting the standardisation of South African languages for technical and scientific work.
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Morphological identification of Lucilia sericata, Lucilia cuprina and their hybrids (Diptera, Calliphoridae)
- Williams, Kirstin A, Villet, Martin H
- Authors: Williams, Kirstin A , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441476 , vital:73892 , https://zookeys.pensoft.net/articles.php?id=3908
- Description: Hybrids of Lucilia sericata and Lucilia cuprina have been shown to exist in previous studies using molecular methods, but no study has shown explicitly that these hybrids can be identified morphologically. Published morphological characters used to identify L. sericata and L. cuprina were reviewed, and then scored and tested using specimens of both species and known hybrids. Ordination by multi-dimensional scaling indicated that the species were separable, and that hybrids resembled L. cuprina, whatever their origin. Discriminant function analysis of the characters successfully separated the specimens into three unambiguous groups – L. sericata, L. cuprina and hybrids. The hybrids were morphologically similar irrespective of whether they were from an ancient introgressed lineage or more modern. This is the first evidence that hybrids of these two species can be identified from their morphology. The usefulness of the morphological characters is also discussed and photographs of several characters are included to facilitate their assessment.
- Full Text:
- Authors: Williams, Kirstin A , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441476 , vital:73892 , https://zookeys.pensoft.net/articles.php?id=3908
- Description: Hybrids of Lucilia sericata and Lucilia cuprina have been shown to exist in previous studies using molecular methods, but no study has shown explicitly that these hybrids can be identified morphologically. Published morphological characters used to identify L. sericata and L. cuprina were reviewed, and then scored and tested using specimens of both species and known hybrids. Ordination by multi-dimensional scaling indicated that the species were separable, and that hybrids resembled L. cuprina, whatever their origin. Discriminant function analysis of the characters successfully separated the specimens into three unambiguous groups – L. sericata, L. cuprina and hybrids. The hybrids were morphologically similar irrespective of whether they were from an ancient introgressed lineage or more modern. This is the first evidence that hybrids of these two species can be identified from their morphology. The usefulness of the morphological characters is also discussed and photographs of several characters are included to facilitate their assessment.
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My enemy's enemies: recruiting hemipteran-tending generalist ants for biological control in citrus orchards by spatial partitioning of foraging webs
- Bownes, Angela, Moore, Sean D, Villet, Martin H
- Authors: Bownes, Angela , Moore, Sean D , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442075 , vital:73953 , https://hdl.handle.net/10520/EJC160247
- Description: Generalist predators are contentious biocontrol agents, especially ants that protect pestilent hemipterans from specialist predators and parasitoids. We attempted to force generalist, hemipteran-tending ants into a degree of dietary specificity by spatially partitioning and simplifying their trophic web. Pupae of Helicoverpa armigera, Thaumatotibia leucotreta and Ceratitis capitata introduced into a citrus orchard survived significantly better in plots where all nests of two pestilent, generalist ant species namely Anoplolepis custodiens and Pheidole megacephala had been poisoned compared with untreated control plots. In some plots the ants' foraging environments were partitioned into arboreal and epigaeic trophic webs using sticky barriers to prevent ground-nesting ants from ascending the trees. Plots partitioned this way showed suppressed levels of survival of emplaced pest pupae that were similar to those in unpartitioned control plots. Pest survival was significantly lower for T. leucotreta than for H. armigera and C. capitata, implicating prey body size or life cycle duration as factors in predation by ants. Pheidole megacephala and the predator complex as a whole can be valuable agents in the natural control of soil-pupating citrus pests if they are restricted to the ground. Trunk banding, rather than poisoning, is therefore recommended as part of managing ecologically mercenary ants in citrus orchards.
- Full Text:
- Authors: Bownes, Angela , Moore, Sean D , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442075 , vital:73953 , https://hdl.handle.net/10520/EJC160247
- Description: Generalist predators are contentious biocontrol agents, especially ants that protect pestilent hemipterans from specialist predators and parasitoids. We attempted to force generalist, hemipteran-tending ants into a degree of dietary specificity by spatially partitioning and simplifying their trophic web. Pupae of Helicoverpa armigera, Thaumatotibia leucotreta and Ceratitis capitata introduced into a citrus orchard survived significantly better in plots where all nests of two pestilent, generalist ant species namely Anoplolepis custodiens and Pheidole megacephala had been poisoned compared with untreated control plots. In some plots the ants' foraging environments were partitioned into arboreal and epigaeic trophic webs using sticky barriers to prevent ground-nesting ants from ascending the trees. Plots partitioned this way showed suppressed levels of survival of emplaced pest pupae that were similar to those in unpartitioned control plots. Pest survival was significantly lower for T. leucotreta than for H. armigera and C. capitata, implicating prey body size or life cycle duration as factors in predation by ants. Pheidole megacephala and the predator complex as a whole can be valuable agents in the natural control of soil-pupating citrus pests if they are restricted to the ground. Trunk banding, rather than poisoning, is therefore recommended as part of managing ecologically mercenary ants in citrus orchards.
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Phylogeny of the family Trogidae (Coleoptera: Scarabaeoidea) inferred from mitochondrial and nuclear ribosomal DNA sequence data
- Strümpher, Werner P, Sole, Catherine L, Villet, Martin H, Scholtz, Clarke H
- Authors: Strümpher, Werner P , Sole, Catherine L , Villet, Martin H , Scholtz, Clarke H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442253 , vital:73970 , https://doi.org/10.1111/syen.12074
- Description: Trogidae constitute a monophyletic and biologically unique family within Scarabaeoidea, being the only keratinophagous group in the superfamily. Traditionally, the family has been divided into three distinctive genera, Polynoncus Burmeister, Omorgus Erichson and Trox Fabricius. Although the taxonomy of the group is relatively well studied, changes to the existing classification have recently been proposed and the family as currently constituted has not been subjected to phylogenetic analyses. Here we present a molecular phylogeny for this cosmopolitan family based on three partially sequenced gene regions: 16S rRNA, 18S rRNA and 28S rRNA (domain 2). Included in the analyses are representatives belonging to four of the five extant genera (and three of the four subgenera) from all major zoogeographic regions, representing about 20% of the known trogid species diversity in the family. Phylogenetic analyses performed included parsimony and Bayesian inference. We deduce their historical biogeography by using trogid fossils as calibration points for divergence estimates. Our analyses resolved relationships between and within genera and subgenera that are largely congruent with existing phylogeny hypotheses based on morphological data. We recovered four well‐supported radiations: Polynoncus, Omorgus, Holarctic Trox and African Phoberus MacLeay. On the basis of this study, it is proposed that taxonomic changes to the generic classification of the family be made. The subgenera Trox and Phoberus should be elevated to genera to include the Holarctic and all the Afrotropical species, respectively, and Afromorgus returned to subgeneric rank. Estimates of divergence time are consistent with a Pangaean origin of the family in the Early Jurassic. The subsequent diversification of the major lineages is largely attributed to the break‐up of Pangaea and Gondwana in the Middle Jurassic and early Late Cretaceous, respectively.
- Full Text:
- Authors: Strümpher, Werner P , Sole, Catherine L , Villet, Martin H , Scholtz, Clarke H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442253 , vital:73970 , https://doi.org/10.1111/syen.12074
- Description: Trogidae constitute a monophyletic and biologically unique family within Scarabaeoidea, being the only keratinophagous group in the superfamily. Traditionally, the family has been divided into three distinctive genera, Polynoncus Burmeister, Omorgus Erichson and Trox Fabricius. Although the taxonomy of the group is relatively well studied, changes to the existing classification have recently been proposed and the family as currently constituted has not been subjected to phylogenetic analyses. Here we present a molecular phylogeny for this cosmopolitan family based on three partially sequenced gene regions: 16S rRNA, 18S rRNA and 28S rRNA (domain 2). Included in the analyses are representatives belonging to four of the five extant genera (and three of the four subgenera) from all major zoogeographic regions, representing about 20% of the known trogid species diversity in the family. Phylogenetic analyses performed included parsimony and Bayesian inference. We deduce their historical biogeography by using trogid fossils as calibration points for divergence estimates. Our analyses resolved relationships between and within genera and subgenera that are largely congruent with existing phylogeny hypotheses based on morphological data. We recovered four well‐supported radiations: Polynoncus, Omorgus, Holarctic Trox and African Phoberus MacLeay. On the basis of this study, it is proposed that taxonomic changes to the generic classification of the family be made. The subgenera Trox and Phoberus should be elevated to genera to include the Holarctic and all the Afrotropical species, respectively, and Afromorgus returned to subgeneric rank. Estimates of divergence time are consistent with a Pangaean origin of the family in the Early Jurassic. The subsequent diversification of the major lineages is largely attributed to the break‐up of Pangaea and Gondwana in the Middle Jurassic and early Late Cretaceous, respectively.
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Predicting the geographic distribution of Lucilia sericata and Lucilia cuprina (Diptera Calliphoridae) in South Africa
- Williams, Kirstin A, Richards, Cameron S, Villet, Martin H
- Authors: Williams, Kirstin A , Richards, Cameron S , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440681 , vital:73803 , https://hdl.handle.net/10520/EJC158017
- Description: Lucilia sericata (Meigen, 1826) and Lucilia cuprina (Wiedemann, 1830) (Diptera: Calliphoridae: Luciliinae) have medical, veterinary and forensic importance. Knowing their distribution in South Africa would allow more effective management and utilisation of these flies. Their predicted geographic distributions in South Africa were modelled using maximum entropy analysis of selected climatic variables. The most important environmental variables in modelling the distributions were the magnitude of monthly rainfall and the magnitude of the monthly maximum temperature for L. sericata and the seasonal variation in monthly mean humidity and magnitude of monthly rainfall for L. cuprina. A clear geographical bias was shown in museum records and supports the need for focused surveys. There was no correlation between the predicted distribution of L. cuprina and sheep farming in South Africa, nor between the predicted distribution of L. sericata and human population density. Although their patterns of occurrence differed, both species are widely distributed in South Africa and therefore one cannot identify these flies by locality alone - morphological or molecular identification is necessary.
- Full Text:
- Authors: Williams, Kirstin A , Richards, Cameron S , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440681 , vital:73803 , https://hdl.handle.net/10520/EJC158017
- Description: Lucilia sericata (Meigen, 1826) and Lucilia cuprina (Wiedemann, 1830) (Diptera: Calliphoridae: Luciliinae) have medical, veterinary and forensic importance. Knowing their distribution in South Africa would allow more effective management and utilisation of these flies. Their predicted geographic distributions in South Africa were modelled using maximum entropy analysis of selected climatic variables. The most important environmental variables in modelling the distributions were the magnitude of monthly rainfall and the magnitude of the monthly maximum temperature for L. sericata and the seasonal variation in monthly mean humidity and magnitude of monthly rainfall for L. cuprina. A clear geographical bias was shown in museum records and supports the need for focused surveys. There was no correlation between the predicted distribution of L. cuprina and sheep farming in South Africa, nor between the predicted distribution of L. sericata and human population density. Although their patterns of occurrence differed, both species are widely distributed in South Africa and therefore one cannot identify these flies by locality alone - morphological or molecular identification is necessary.
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Successful identification of the final instar nymph of Quintilia carinata (Thunberg)(Hemiptera: Cicadidae) by DNA extraction from the exuvium
- Bouwer, Nicolette, Midgley, John M, Timm, Alicia E, Villet, Martin H
- Authors: Bouwer, Nicolette , Midgley, John M , Timm, Alicia E , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442347 , vital:73977 , https://doi.org/10.1080/00222933.2013.836759
- Description: Despite being taxonomically and phylogenetically informative, the morphology of the immature stages of cicadas has received comparatively superficial attention. One reason for this is the difficulty of positively identifying immature stages, particularly as these stages are fossorial. We present a method for identifying cicada exuviae using DNA sequence data and describe a set of characters and character states for the final instar nymph of Quintilia carinata (Thunberg). The identification of immature stages using molecular methods will increase our knowledge of African cicadas, allowing for the initiation of future phylogenetic and ecological comparisons.
- Full Text:
- Authors: Bouwer, Nicolette , Midgley, John M , Timm, Alicia E , Villet, Martin H
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442347 , vital:73977 , https://doi.org/10.1080/00222933.2013.836759
- Description: Despite being taxonomically and phylogenetically informative, the morphology of the immature stages of cicadas has received comparatively superficial attention. One reason for this is the difficulty of positively identifying immature stages, particularly as these stages are fossorial. We present a method for identifying cicada exuviae using DNA sequence data and describe a set of characters and character states for the final instar nymph of Quintilia carinata (Thunberg). The identification of immature stages using molecular methods will increase our knowledge of African cicadas, allowing for the initiation of future phylogenetic and ecological comparisons.
- Full Text:
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