Strengthening teachers’ knowledge and practices through a biodiversity education professional development programme
- Songqwaru, Zintle, Shava, Soul
- Authors: Songqwaru, Zintle , Shava, Soul
- Date: 2017
- Subjects: To be catalogued
- Language: English
- Type: text , book chapter
- Identifier: http://hdl.handle.net/10962/436294 , vital:73255 , ISBN 978-3-319-45989-9 , https://doi.org/10.1007/978-3-319-45989-9_15
- Description: What constitutes adequate teacher professional development support that enables teachers to engage meaningfully with ESD learning processes? In an attempt to answer this question, this chapter focuses on how continuing teacher profes-sional development programmes can support teachers of Life Sciences to teach biodiversity as a grounding concept to strengthen educational quality and relevance of Life Sciences education. It reflects on how continuing teacher professional development programmes may be designed and implemented to support South African teachers to work creatively with a con-tent and assessment-referenced national school curriculum. The chapter focuses on what content knowledge, teaching and assessment approaches to include as well as teachers’ reflections on the impacts of such a programme.
- Full Text:
- Date Issued: 2017
- Authors: Songqwaru, Zintle , Shava, Soul
- Date: 2017
- Subjects: To be catalogued
- Language: English
- Type: text , book chapter
- Identifier: http://hdl.handle.net/10962/436294 , vital:73255 , ISBN 978-3-319-45989-9 , https://doi.org/10.1007/978-3-319-45989-9_15
- Description: What constitutes adequate teacher professional development support that enables teachers to engage meaningfully with ESD learning processes? In an attempt to answer this question, this chapter focuses on how continuing teacher profes-sional development programmes can support teachers of Life Sciences to teach biodiversity as a grounding concept to strengthen educational quality and relevance of Life Sciences education. It reflects on how continuing teacher professional development programmes may be designed and implemented to support South African teachers to work creatively with a con-tent and assessment-referenced national school curriculum. The chapter focuses on what content knowledge, teaching and assessment approaches to include as well as teachers’ reflections on the impacts of such a programme.
- Full Text:
- Date Issued: 2017
Dung beetle (Coleoptera Scarabaeoidea) assemblages in the western Italian Alps: benchmark data for land use monitoring
- Tocco, Claudia, Villet, Martin H
- Authors: Tocco, Claudia , Villet, Martin H
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441361 , vital:73879 , 10.3897/BDJ.4.e10059
- Description: Traditional agro-pastoral practices are in decline over much of the Alps (MacDonald et al. 2000), leading to shrub and tree encroachment, and this represents one of the main threats for the conservation of alpine biodiversity, as many plant and animal species are dependent on the presence of semi-natural open habitats. However, quantifying this environmental change and assessing its impact on biodiversity may be difficult, especially in the context of sparse historical survey data. The accessibility of contemporary data about local biodiversity surveys in general, and indicator taxa in particular, is an essential consideration for planning future evaluations of conservation status in the Alps and for conservation plans that use ecological indicators to monitor temporal changes in biodiversity. Dung beetles are important ecosystem service providers (Nichols et al. 2008) that have been assessed as a good ecological indicator taxon in several studies (reviewed by Nichols and Gardner 2011), and although the Alps is perhaps one of the best-studied regions in respect of dung beetles, there are still only eight readily-accessible publications. We have augmented and comprehensively reviewed the data from these publications.
- Full Text:
- Date Issued: 2016
- Authors: Tocco, Claudia , Villet, Martin H
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441361 , vital:73879 , 10.3897/BDJ.4.e10059
- Description: Traditional agro-pastoral practices are in decline over much of the Alps (MacDonald et al. 2000), leading to shrub and tree encroachment, and this represents one of the main threats for the conservation of alpine biodiversity, as many plant and animal species are dependent on the presence of semi-natural open habitats. However, quantifying this environmental change and assessing its impact on biodiversity may be difficult, especially in the context of sparse historical survey data. The accessibility of contemporary data about local biodiversity surveys in general, and indicator taxa in particular, is an essential consideration for planning future evaluations of conservation status in the Alps and for conservation plans that use ecological indicators to monitor temporal changes in biodiversity. Dung beetles are important ecosystem service providers (Nichols et al. 2008) that have been assessed as a good ecological indicator taxon in several studies (reviewed by Nichols and Gardner 2011), and although the Alps is perhaps one of the best-studied regions in respect of dung beetles, there are still only eight readily-accessible publications. We have augmented and comprehensively reviewed the data from these publications.
- Full Text:
- Date Issued: 2016
Keeping it in the family: coevolution of latrunculid sponges and their dominant bacterial symbionts
- Matcher, Gwynneth F, Waterworth, Samantha C, Walmsley, Tara A, Matsatsa, Tendayi, Parker-Nance, Shirley, Davies-Coleman, Michael T, Dorrington, Rosemary A
- Authors: Matcher, Gwynneth F , Waterworth, Samantha C , Walmsley, Tara A , Matsatsa, Tendayi , Parker-Nance, Shirley , Davies-Coleman, Michael T , Dorrington, Rosemary A
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/65603 , vital:28818 , https://doi.org/10.1002/mbo3.417
- Description: publisher version , The Latrunculiidae are a family of cold water sponges known for their production of bioactive pyrroloiminoquinone alkaloids. Previously it was shown that the bacterial community associated with a Tsitsikamma sponge species comprises unusual bacterial taxa and is dominated by a novel Betaproteobacterium. Here, we have characterized the bacterial communities associated with six latrunculid species representing three genera (Tsitsikamma, Cyclacanthia, and Latrunculia) as well as a Mycale species, collected from Algoa Bay on the South African southeast coast. The bacterial communities of all seven sponge species were dominated by a single Betaproteobacterium operational taxonomic unit (OTU0.03), while a second OTU0.03 was dominant in the Mycale sp. The Betaproteobacteria OTUs from the different latrunculid sponges are closely related and their phylogenetic relationship follows that of their hosts. We propose that the latrunculid Betaproteobacteria OTUs are members of a specialized group of sponge symbionts that may have coevolved with their hosts. A single dominant Spirochaetae OTU0.03 was present in the Tsitsikamma and Cyclacanthia sponge species, but absent from the Latrunculia and Mycale sponges. This study sheds new light on the interactions between latrunculid sponges and their bacterial communities and may point to the potential involvement of dominant symbionts in the biosynthesis of the bioactive secondary metabolites. , This research was supported by a SARChI grant from the South African National Research Foundation (NRF, GUN: 87583) and the Rhodes University Sandisa Imbewu Programme. S. C. W. was supported by an NRF Innovation PhD Scholarship and a Rhodes University Henderson PhD Scholarship. T. A. W. was supported by PhD Fellowships from the NRF and the German Academic Exchange Service (DAAD)
- Full Text:
- Date Issued: 2016
- Authors: Matcher, Gwynneth F , Waterworth, Samantha C , Walmsley, Tara A , Matsatsa, Tendayi , Parker-Nance, Shirley , Davies-Coleman, Michael T , Dorrington, Rosemary A
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/65603 , vital:28818 , https://doi.org/10.1002/mbo3.417
- Description: publisher version , The Latrunculiidae are a family of cold water sponges known for their production of bioactive pyrroloiminoquinone alkaloids. Previously it was shown that the bacterial community associated with a Tsitsikamma sponge species comprises unusual bacterial taxa and is dominated by a novel Betaproteobacterium. Here, we have characterized the bacterial communities associated with six latrunculid species representing three genera (Tsitsikamma, Cyclacanthia, and Latrunculia) as well as a Mycale species, collected from Algoa Bay on the South African southeast coast. The bacterial communities of all seven sponge species were dominated by a single Betaproteobacterium operational taxonomic unit (OTU0.03), while a second OTU0.03 was dominant in the Mycale sp. The Betaproteobacteria OTUs from the different latrunculid sponges are closely related and their phylogenetic relationship follows that of their hosts. We propose that the latrunculid Betaproteobacteria OTUs are members of a specialized group of sponge symbionts that may have coevolved with their hosts. A single dominant Spirochaetae OTU0.03 was present in the Tsitsikamma and Cyclacanthia sponge species, but absent from the Latrunculia and Mycale sponges. This study sheds new light on the interactions between latrunculid sponges and their bacterial communities and may point to the potential involvement of dominant symbionts in the biosynthesis of the bioactive secondary metabolites. , This research was supported by a SARChI grant from the South African National Research Foundation (NRF, GUN: 87583) and the Rhodes University Sandisa Imbewu Programme. S. C. W. was supported by an NRF Innovation PhD Scholarship and a Rhodes University Henderson PhD Scholarship. T. A. W. was supported by PhD Fellowships from the NRF and the German Academic Exchange Service (DAAD)
- Full Text:
- Date Issued: 2016
Multiple drivers of local (non-) compliance in community-cased marine resource management: case studies from the South Pacific
- Rohe, Janne R, Aswani, Shankar, Schlüter, Achim, Ferse, Sebastian C A
- Authors: Rohe, Janne R , Aswani, Shankar , Schlüter, Achim , Ferse, Sebastian C A
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70571 , vital:29676 , https://doi.org/10.3389/fmars.2017.00172
- Description: The outcomes of marine conservation and related management interventions depend to a large extent on people's compliance with these rule systems. In the South Pacific, community-based marine resource management (CBMRM) has gained wide recognition as a strategy for the sustainable management of marine resources. In current practice, CBMRM initiatives often build upon customary forms of marine governance, integrating scientific advice and management principles in collaboration with external partners. However, diverse socio-economic developments as well as limited legal mandates can challenge these approaches. Compliance with and effective (legally-backed) enforcement of local management strategies constitute a growing challenge for communities—often resulting in considerable impact on the success or failure of CBMRM. Marine management arrangements are highly dynamic over time, and similarly compliance with rule systems tends to change depending on context. Understanding the factors contributing to (non-) compliance in a given setting is key to the design and function of adaptive management approaches. Yet, few empirical studies have looked in depth into the dynamics around local (non-) compliance with local marine tenure rules under the transforming management arrangements. Using two case studies from Solomon Islands and Fiji, we investigate what drives local (non-) compliance with CBMRM and what hinders or supports its effective enforcement. The case studies reveal that non-compliance is mainly driven by: (1) diminishing perceived legitimacy of local rules and rule-makers; (2) increased incentives to break rules due to market access and/ or lack of alternative income; and (3) relatively weak enforcement of local rules (i.e., low perceptions of risk from sanctions for rule-breaking). These drivers do not stand alone but can act together and add up to impair effective management. We further analyze how enforcement of CBMRM is challenged through a range of institutional; socio-cultural and technical/financial constraints, which are in parts a result of the dynamism and ongoing transformations of management arrangements. Our study underlines the importance of better understanding and contextualizing marine resource management processes under dynamic conditions for an improved understanding of compliance in a particular setting.
- Full Text:
- Date Issued: 2016
- Authors: Rohe, Janne R , Aswani, Shankar , Schlüter, Achim , Ferse, Sebastian C A
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70571 , vital:29676 , https://doi.org/10.3389/fmars.2017.00172
- Description: The outcomes of marine conservation and related management interventions depend to a large extent on people's compliance with these rule systems. In the South Pacific, community-based marine resource management (CBMRM) has gained wide recognition as a strategy for the sustainable management of marine resources. In current practice, CBMRM initiatives often build upon customary forms of marine governance, integrating scientific advice and management principles in collaboration with external partners. However, diverse socio-economic developments as well as limited legal mandates can challenge these approaches. Compliance with and effective (legally-backed) enforcement of local management strategies constitute a growing challenge for communities—often resulting in considerable impact on the success or failure of CBMRM. Marine management arrangements are highly dynamic over time, and similarly compliance with rule systems tends to change depending on context. Understanding the factors contributing to (non-) compliance in a given setting is key to the design and function of adaptive management approaches. Yet, few empirical studies have looked in depth into the dynamics around local (non-) compliance with local marine tenure rules under the transforming management arrangements. Using two case studies from Solomon Islands and Fiji, we investigate what drives local (non-) compliance with CBMRM and what hinders or supports its effective enforcement. The case studies reveal that non-compliance is mainly driven by: (1) diminishing perceived legitimacy of local rules and rule-makers; (2) increased incentives to break rules due to market access and/ or lack of alternative income; and (3) relatively weak enforcement of local rules (i.e., low perceptions of risk from sanctions for rule-breaking). These drivers do not stand alone but can act together and add up to impair effective management. We further analyze how enforcement of CBMRM is challenged through a range of institutional; socio-cultural and technical/financial constraints, which are in parts a result of the dynamism and ongoing transformations of management arrangements. Our study underlines the importance of better understanding and contextualizing marine resource management processes under dynamic conditions for an improved understanding of compliance in a particular setting.
- Full Text:
- Date Issued: 2016
Optimising design and effort for environmental surveys using dung beetles (Coleoptera: Scarabaeidae):
- Tocco, Claudia, Quinn, Danielle, Midgley, John M, Villet, Martin H
- Authors: Tocco, Claudia , Quinn, Danielle , Midgley, John M , Villet, Martin H
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/140670 , vital:37908 , DOI: 10.4039/tce.2016.48
- Description: In biological monitoring, deploying an effective standardised quantitative sampling method, optimised by trap design and sampling effort, is an essential consideration. To exemplify this using dung beetle (Coleoptera: Scarabaeidae: Scarabaeinae and Aphodiinae) communities, three pitfall trap designs (un-baited (TN), baited at ground level (flat trap, TF), and baited above the trap (hanging trap, TH)), employed with varying levels of sampling effort (number of traps = 1, 2, 3… 10; number of days = 1, 2, 3), were evaluated for sampling completeness and efficiency in the Eastern Cape, South Africa. Modelling and resampling simulation approaches were used to suggest optimal sampling protocols across environmentally diverse sites. Overall, TF recovered the greatest abundance and species richness of dung beetles, but behavioural guilds showed conflicting trends: endocoprids preferred TH while paracoprids and telocoprids preferred TF. Resampling simulation of trap type and the two components of sampling effort suggested that six TF traps left for three days was most efficient in obtaining a representative sample and allowed differentiation between trap types, allowing the improved efficiency to be recognised. The effect of trap type on non-target specimens, particularly ants, was also investigated. TF and TH caught almost no by-catch, which is ethically desirable.
- Full Text:
- Date Issued: 2016
- Authors: Tocco, Claudia , Quinn, Danielle , Midgley, John M , Villet, Martin H
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/140670 , vital:37908 , DOI: 10.4039/tce.2016.48
- Description: In biological monitoring, deploying an effective standardised quantitative sampling method, optimised by trap design and sampling effort, is an essential consideration. To exemplify this using dung beetle (Coleoptera: Scarabaeidae: Scarabaeinae and Aphodiinae) communities, three pitfall trap designs (un-baited (TN), baited at ground level (flat trap, TF), and baited above the trap (hanging trap, TH)), employed with varying levels of sampling effort (number of traps = 1, 2, 3… 10; number of days = 1, 2, 3), were evaluated for sampling completeness and efficiency in the Eastern Cape, South Africa. Modelling and resampling simulation approaches were used to suggest optimal sampling protocols across environmentally diverse sites. Overall, TF recovered the greatest abundance and species richness of dung beetles, but behavioural guilds showed conflicting trends: endocoprids preferred TH while paracoprids and telocoprids preferred TF. Resampling simulation of trap type and the two components of sampling effort suggested that six TF traps left for three days was most efficient in obtaining a representative sample and allowed differentiation between trap types, allowing the improved efficiency to be recognised. The effect of trap type on non-target specimens, particularly ants, was also investigated. TF and TH caught almost no by-catch, which is ethically desirable.
- Full Text:
- Date Issued: 2016
Plasmodium falciparum Hep1 is required to prevent the self aggregation of PfHsp70-3
- Nyakundi, David O, Vuko, Loyiso A M, Bentley, Stephen J, Hoppe, Heinrich C, Blatch, Gregory L, Boshoff, Aileen
- Authors: Nyakundi, David O , Vuko, Loyiso A M , Bentley, Stephen J , Hoppe, Heinrich C , Blatch, Gregory L , Boshoff, Aileen
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66109 , vital:28903 , https://doi.org/10.1371/journal.pone.0156446
- Description: publisher version , The majority of mitochondrial proteins are encoded in the nucleus and need to be imported from the cytosol into the mitochondria, and molecular chaperones play a key role in the efficient translocation and proper folding of these proteins in the matrix. One such molecular chaperone is the eukaryotic mitochondrial heat shock protein 70 (Hsp70); however, it is prone to self-aggregation and requires the presence of an essential zinc-finger protein, Hsp70-escort protein 1 (Hep1), to maintain its structure and function. PfHsp70-3, the only Hsp70 predicted to localize in the mitochondria of P. falciparum, may also rely on a Hep1 orthologue to prevent self-aggregation. In this study, we identified a putative Hep1 orthologue in P. falciparum and co-expression of PfHsp70-3 and PfHep1 enhanced the solubility of PfHsp70-3. PfHep1 suppressed the thermally induced aggregation of PfHsp70-3 but not the aggregation of malate dehydrogenase or citrate synthase, thus showing specificity for PfHsp70-3. Zinc ions were indeed essential for maintaining the function of PfHep1, as EDTA chelation abrogated its abilities to suppress the aggregation of PfHsp70-3. Soluble and functional PfHsp70-3, acquired by co-expression with PfHep-1, will facilitate the biochemical characterisation of this particular Hsp70 protein and its evaluation as a drug target for the treatment of malaria. , This work was funded by grants from the National Research Foundation (NRF); grant number 87663 and Deutsche Forschungsgemeinschaft (DFG); grant number LI 402/14-1. D.O.N. is the recipient of academic development and training funds from Mwenge Catholic University, Moshi, Tanzania. S.J.B. is the recipient of an NRF Doctoral Innovation Scholarship.
- Full Text:
- Date Issued: 2016
- Authors: Nyakundi, David O , Vuko, Loyiso A M , Bentley, Stephen J , Hoppe, Heinrich C , Blatch, Gregory L , Boshoff, Aileen
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66109 , vital:28903 , https://doi.org/10.1371/journal.pone.0156446
- Description: publisher version , The majority of mitochondrial proteins are encoded in the nucleus and need to be imported from the cytosol into the mitochondria, and molecular chaperones play a key role in the efficient translocation and proper folding of these proteins in the matrix. One such molecular chaperone is the eukaryotic mitochondrial heat shock protein 70 (Hsp70); however, it is prone to self-aggregation and requires the presence of an essential zinc-finger protein, Hsp70-escort protein 1 (Hep1), to maintain its structure and function. PfHsp70-3, the only Hsp70 predicted to localize in the mitochondria of P. falciparum, may also rely on a Hep1 orthologue to prevent self-aggregation. In this study, we identified a putative Hep1 orthologue in P. falciparum and co-expression of PfHsp70-3 and PfHep1 enhanced the solubility of PfHsp70-3. PfHep1 suppressed the thermally induced aggregation of PfHsp70-3 but not the aggregation of malate dehydrogenase or citrate synthase, thus showing specificity for PfHsp70-3. Zinc ions were indeed essential for maintaining the function of PfHep1, as EDTA chelation abrogated its abilities to suppress the aggregation of PfHsp70-3. Soluble and functional PfHsp70-3, acquired by co-expression with PfHep-1, will facilitate the biochemical characterisation of this particular Hsp70 protein and its evaluation as a drug target for the treatment of malaria. , This work was funded by grants from the National Research Foundation (NRF); grant number 87663 and Deutsche Forschungsgemeinschaft (DFG); grant number LI 402/14-1. D.O.N. is the recipient of academic development and training funds from Mwenge Catholic University, Moshi, Tanzania. S.J.B. is the recipient of an NRF Doctoral Innovation Scholarship.
- Full Text:
- Date Issued: 2016
Structure based docking and molecular dynamic studies of plasmodial cysteine proteases against a South African natural compound and its analogs:
- Musyoka, Thommas M, Kanzi, Aquillah M, Lobb, Kevin A, Tastan Bishop, Özlem
- Authors: Musyoka, Thommas M , Kanzi, Aquillah M , Lobb, Kevin A , Tastan Bishop, Özlem
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/148027 , vital:38703 , DOI: 10.1038/srep23690
- Description: Identification of potential drug targets as well as development of novel antimalarial chemotherapies with unique mode of actions due to drug resistance by Plasmodium parasites are inevitable. Falcipains (falcipain-2 and falcipain-3) of Plasmodium falciparum, which catalyse the haemoglobin degradation process, are validated drug targets. Previous attempts to develop peptide based drugs against these enzymes have been futile due to the poor pharmacological profiles and susceptibility to degradation by host enzymes. This study aimed to identify potential non-peptide inhibitors against falcipains and their homologs from other Plasmodium species.
- Full Text:
- Date Issued: 2016
- Authors: Musyoka, Thommas M , Kanzi, Aquillah M , Lobb, Kevin A , Tastan Bishop, Özlem
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/148027 , vital:38703 , DOI: 10.1038/srep23690
- Description: Identification of potential drug targets as well as development of novel antimalarial chemotherapies with unique mode of actions due to drug resistance by Plasmodium parasites are inevitable. Falcipains (falcipain-2 and falcipain-3) of Plasmodium falciparum, which catalyse the haemoglobin degradation process, are validated drug targets. Previous attempts to develop peptide based drugs against these enzymes have been futile due to the poor pharmacological profiles and susceptibility to degradation by host enzymes. This study aimed to identify potential non-peptide inhibitors against falcipains and their homologs from other Plasmodium species.
- Full Text:
- Date Issued: 2016
The Malarial Exported PFA0660w Is an Hsp40 Co-Chaperone of PfHsp70-x
- Daniyan, Michael O, Boshoff, Aileen, Prinsloo, Earl, Pesce, Eva-Rachele, Blatch, Gregory L
- Authors: Daniyan, Michael O , Boshoff, Aileen , Prinsloo, Earl , Pesce, Eva-Rachele , Blatch, Gregory L
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66098 , vital:28901 , https://doi.org/10.1371/journal.pone.0148517
- Description: publisher version , Plasmodium falciparum, the human pathogen responsible for the most dangerous malaria infection, survives and develops in mature erythrocytes through the export of proteins needed for remodelling of the host cell. Molecular chaperones of the heat shock protein (Hsp) family are prominent members of the exportome, including a number of Hsp40s and a Hsp70. PFA0660w, a type II Hsp40, has been shown to be exported and possibly form a complex with PfHsp70-x in the infected erythrocyte cytosol. However, the chaperone properties of PFA0660w and its interaction with human and parasite Hsp70s are yet to be investigated. Recombinant PFA0660w was found to exist as a monomer in solution, and was able to significantly stimulate the ATPase activity of PfHsp70-x but not that of a second plasmodial Hsp70 (PfHsp70-1) or a human Hsp70 (HSPA1A), indicating a potential specific functional partnership with PfHsp70-x. Protein binding studies in the presence and absence of ATP suggested that the interaction of PFA0660w with PfHsp70-x most likely represented a co-chaperone/chaperone interaction. Also, PFA0660w alone produced a concentration-dependent suppression of rhodanese aggregation, demonstrating its chaperone properties. Overall, we have provided the first biochemical evidence for the possible role of PFA0660w as a chaperone and as co-chaperone of PfHsp70-x. We propose that these chaperones boost the chaperone power of the infected erythrocyte, enabling successful protein trafficking and folding, and thereby making a fundamental contribution to the pathology of malaria. , This work was supported by grants from the National Research Foundation (NRF) and Medical Research Council (MRC) of South Africa. The ProteOn XPR36 IAS was purchased from a National Nanotechnology Equipment Programme grant from the Department of Science and Technology and the NRF of South Africa. Michael O. Daniyan was a recipient of the Education Trust Fund (ETF) Academic Staff Training and Development (AST and D) scholarship of Obafemi Awolowo University, Ile-Ife, Nigeria and a Rhodes University Council research bursary
- Full Text:
- Date Issued: 2016
- Authors: Daniyan, Michael O , Boshoff, Aileen , Prinsloo, Earl , Pesce, Eva-Rachele , Blatch, Gregory L
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66098 , vital:28901 , https://doi.org/10.1371/journal.pone.0148517
- Description: publisher version , Plasmodium falciparum, the human pathogen responsible for the most dangerous malaria infection, survives and develops in mature erythrocytes through the export of proteins needed for remodelling of the host cell. Molecular chaperones of the heat shock protein (Hsp) family are prominent members of the exportome, including a number of Hsp40s and a Hsp70. PFA0660w, a type II Hsp40, has been shown to be exported and possibly form a complex with PfHsp70-x in the infected erythrocyte cytosol. However, the chaperone properties of PFA0660w and its interaction with human and parasite Hsp70s are yet to be investigated. Recombinant PFA0660w was found to exist as a monomer in solution, and was able to significantly stimulate the ATPase activity of PfHsp70-x but not that of a second plasmodial Hsp70 (PfHsp70-1) or a human Hsp70 (HSPA1A), indicating a potential specific functional partnership with PfHsp70-x. Protein binding studies in the presence and absence of ATP suggested that the interaction of PFA0660w with PfHsp70-x most likely represented a co-chaperone/chaperone interaction. Also, PFA0660w alone produced a concentration-dependent suppression of rhodanese aggregation, demonstrating its chaperone properties. Overall, we have provided the first biochemical evidence for the possible role of PFA0660w as a chaperone and as co-chaperone of PfHsp70-x. We propose that these chaperones boost the chaperone power of the infected erythrocyte, enabling successful protein trafficking and folding, and thereby making a fundamental contribution to the pathology of malaria. , This work was supported by grants from the National Research Foundation (NRF) and Medical Research Council (MRC) of South Africa. The ProteOn XPR36 IAS was purchased from a National Nanotechnology Equipment Programme grant from the Department of Science and Technology and the NRF of South Africa. Michael O. Daniyan was a recipient of the Education Trust Fund (ETF) Academic Staff Training and Development (AST and D) scholarship of Obafemi Awolowo University, Ile-Ife, Nigeria and a Rhodes University Council research bursary
- Full Text:
- Date Issued: 2016
‘Abagyenda bareeba. Those who Travel, See’: Home, Migration and the Maternal Bond in Doreen Baingana’s Tropical Fish
- Authors: Spencer, Lynda G
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/139017 , vital:37696 , https://doi.org/10.1080/00020184.2016.1182319
- Description: Doreen Baingana’s Tropical Fish explores the migratory experiences of the main narrator-focalizer, Christine Mugisha, as she travels from Uganda to the United States of America. Although the analyses of home, exile, and migration by writers like Edward Said and Paul Tiyambe Zeleza tend to be ungendered; Baingana seems to elaborate on these concerns by reflecting on the gendered experience of travel. As Carole Boyce Davies has argued, the act of travelling and migration opens up new spaces and possibilities for black women writers as they come into contact with multiple places and cultures. In their encounters with migration, black women are able to negotiate and re-negotiate their identities. This article focuses on how Tropical Fish, interrogates complex, contradictory, ambiguous and often conflicted questions of home and migration with their concomitant issues of belonging and alienation/ estrangement and how they are intimately tied to the maternal bond.
- Full Text:
- Date Issued: 2016
- Authors: Spencer, Lynda G
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/139017 , vital:37696 , https://doi.org/10.1080/00020184.2016.1182319
- Description: Doreen Baingana’s Tropical Fish explores the migratory experiences of the main narrator-focalizer, Christine Mugisha, as she travels from Uganda to the United States of America. Although the analyses of home, exile, and migration by writers like Edward Said and Paul Tiyambe Zeleza tend to be ungendered; Baingana seems to elaborate on these concerns by reflecting on the gendered experience of travel. As Carole Boyce Davies has argued, the act of travelling and migration opens up new spaces and possibilities for black women writers as they come into contact with multiple places and cultures. In their encounters with migration, black women are able to negotiate and re-negotiate their identities. This article focuses on how Tropical Fish, interrogates complex, contradictory, ambiguous and often conflicted questions of home and migration with their concomitant issues of belonging and alienation/ estrangement and how they are intimately tied to the maternal bond.
- Full Text:
- Date Issued: 2016
An Assessment of the Effect of Rotenone on Selected Non-Target Aquatic Fauna
- Dalu, Tatenda, Wasserman, Ryan J, Jordaan, Martine, Froneman, P William, Weyl, Olaf L F
- Authors: Dalu, Tatenda , Wasserman, Ryan J , Jordaan, Martine , Froneman, P William , Weyl, Olaf L F
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/124240 , vital:35579 , https://doi.org/10.1371/journal.pone.0142140.g001
- Description: Rotenone, a naturally occurring ketone, is widely employed for the management of invasive fish species. The use of rotenone poses serious challenges to conservation practitioners due to its impacts on non-target organisms including amphibians and macroinvertebrates. Using laboratory studies, we investigated the effects of different rotenone concentrations (0, 12.5, 25, 37.5, 50, 100 μg L-1) on selected invertebrate groups; Aeshnidae, Belostomatids, Decapods, Ephemeroptera, Pulmonata and zooplankton over a period of 18 hours. Based on field observations and body size, we hypothesized that Ephemeropterans and zooplank- ton would be more susceptible to rote none than Decapods, Belostomatids and snails. Experimental results supported this hypothesis and mortality and behaviour effects varied considerably between taxa, ranging from no effect (crab Potamonuates sidneyi) to 100% mortality (Daphnia pulex and Paradiaptomus lamellatus). Planktonic invertebrates were par- ticularly sensitive to rotenone even at very low concentrations. Future research should investigate the recovery time of invertebrate communities after the application of rotenone and conduct field assessments assessing the longer term effects of rotenone exposure on the population dynamics of those less sensitive organisms.
- Full Text:
- Date Issued: 2015
- Authors: Dalu, Tatenda , Wasserman, Ryan J , Jordaan, Martine , Froneman, P William , Weyl, Olaf L F
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/124240 , vital:35579 , https://doi.org/10.1371/journal.pone.0142140.g001
- Description: Rotenone, a naturally occurring ketone, is widely employed for the management of invasive fish species. The use of rotenone poses serious challenges to conservation practitioners due to its impacts on non-target organisms including amphibians and macroinvertebrates. Using laboratory studies, we investigated the effects of different rotenone concentrations (0, 12.5, 25, 37.5, 50, 100 μg L-1) on selected invertebrate groups; Aeshnidae, Belostomatids, Decapods, Ephemeroptera, Pulmonata and zooplankton over a period of 18 hours. Based on field observations and body size, we hypothesized that Ephemeropterans and zooplank- ton would be more susceptible to rote none than Decapods, Belostomatids and snails. Experimental results supported this hypothesis and mortality and behaviour effects varied considerably between taxa, ranging from no effect (crab Potamonuates sidneyi) to 100% mortality (Daphnia pulex and Paradiaptomus lamellatus). Planktonic invertebrates were par- ticularly sensitive to rotenone even at very low concentrations. Future research should investigate the recovery time of invertebrate communities after the application of rotenone and conduct field assessments assessing the longer term effects of rotenone exposure on the population dynamics of those less sensitive organisms.
- Full Text:
- Date Issued: 2015
An Assessment of the Effect of Rotenone on Selected Non-Target Aquatic Fauna: Reflections on Henri Lefebre, Urban Theory and the Politics of Scale
- Dalu, Tatenda, Wasserman, Ryan J, Jordaan, Martine, Froneman, Pierre William
- Authors: Dalu, Tatenda , Wasserman, Ryan J , Jordaan, Martine , Froneman, Pierre William
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70425 , vital:29654 , https://doi.org/10.1371/journal.pone.0142140
- Description: Rotenone, a naturally occurring ketone, is widely employed for the management of invasive fish species. The use of rotenone poses serious challenges to conservation practitioners due to its impacts on non-target organisms including amphibians and macroinvertebrates. Using laboratory studies, we investigated the effects of different rotenone concentrations (0,12.5, 25, 37.5, 50, 100 μg L-1) on selected invertebrate groups; Aeshnidae, Belostomatids, Decapods, Ephemeroptera, Pulmonata and zooplankton over a period of 18 hours. Based on field observations and body size, we hypothesized that Ephemeropterans and zooplankton would be more susceptible to rotenone than Decapods, Belostomatids and snails. Experimental results supported this hypothesis and mortality and behaviour effects varied considerably between taxa, ranging from no effect (crab Potamonuates sidneyi) to 100% mortality (Daphnia pulex and Paradiaptomus lamellatus). Planktonic invertebrates were particularly sensitive to rotenone even at very low concentrations. Future research should investigate the recovery time of invertebrate communities after the application of rotenone and conduct field assessments assessing the longer term effects of rotenone exposure on the population dynamics of those less sensitive organisms.
- Full Text:
- Date Issued: 2015
- Authors: Dalu, Tatenda , Wasserman, Ryan J , Jordaan, Martine , Froneman, Pierre William
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70425 , vital:29654 , https://doi.org/10.1371/journal.pone.0142140
- Description: Rotenone, a naturally occurring ketone, is widely employed for the management of invasive fish species. The use of rotenone poses serious challenges to conservation practitioners due to its impacts on non-target organisms including amphibians and macroinvertebrates. Using laboratory studies, we investigated the effects of different rotenone concentrations (0,12.5, 25, 37.5, 50, 100 μg L-1) on selected invertebrate groups; Aeshnidae, Belostomatids, Decapods, Ephemeroptera, Pulmonata and zooplankton over a period of 18 hours. Based on field observations and body size, we hypothesized that Ephemeropterans and zooplankton would be more susceptible to rotenone than Decapods, Belostomatids and snails. Experimental results supported this hypothesis and mortality and behaviour effects varied considerably between taxa, ranging from no effect (crab Potamonuates sidneyi) to 100% mortality (Daphnia pulex and Paradiaptomus lamellatus). Planktonic invertebrates were particularly sensitive to rotenone even at very low concentrations. Future research should investigate the recovery time of invertebrate communities after the application of rotenone and conduct field assessments assessing the longer term effects of rotenone exposure on the population dynamics of those less sensitive organisms.
- Full Text:
- Date Issued: 2015
Assessment of the spatial and temporal variations in periphyton communities along a small temperate river system: A multimetric and stable isotope analysis approach
- Dalu, Tatenda, Bere, Taurai, Richoux, Nicole B, Froneman, P William
- Authors: Dalu, Tatenda , Bere, Taurai , Richoux, Nicole B , Froneman, P William
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/124249 , vital:35580 , https://doi.org/10.1016/j.sajb.2015.05.028
- Description: Periphyton community structure and stable isotope values have been identified as potential indicators of anthropogenic nitrogen pollution, an increasingly important challenge in aquatic systems. The aim of the study was to assess the spatio-temporal changes in periphyton characteristics to identify potential anthropogenic nitrogen pollution sources such as agricultural and sewage discharge within the Kowie River catchment, South Africa. Periphyton was collected once a season from five sites between September 2012 and May 2013. Diversity indices, multimetric and stable isotope analyses were employed for describing the spatial and temporal dynamics of periphyton community assemblages. Water depth, salinity, resistivity, oxygen reduction potential, nitrates, water velocity and conductivity were the major factors affecting periphyton community structure. Eighty-seven periphyton taxa belonging to 43 genera were recorded throughout the study sites and periods. Periphyton species richness, abundance and stable isotope signatures differed significantly among sites but not among seasons. The lower sections of the Kowie River were polluted by anthropogenic sources as indicated by the high periphytic isotopic nitrogen values (7.9–15.2‰) compared to the pristine upstream sites (4–8‰). We recommend that researchers use a combination of community structure and stable isotope measurements to monitor the periphyton in lotic systems.
- Full Text:
- Date Issued: 2015
- Authors: Dalu, Tatenda , Bere, Taurai , Richoux, Nicole B , Froneman, P William
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/124249 , vital:35580 , https://doi.org/10.1016/j.sajb.2015.05.028
- Description: Periphyton community structure and stable isotope values have been identified as potential indicators of anthropogenic nitrogen pollution, an increasingly important challenge in aquatic systems. The aim of the study was to assess the spatio-temporal changes in periphyton characteristics to identify potential anthropogenic nitrogen pollution sources such as agricultural and sewage discharge within the Kowie River catchment, South Africa. Periphyton was collected once a season from five sites between September 2012 and May 2013. Diversity indices, multimetric and stable isotope analyses were employed for describing the spatial and temporal dynamics of periphyton community assemblages. Water depth, salinity, resistivity, oxygen reduction potential, nitrates, water velocity and conductivity were the major factors affecting periphyton community structure. Eighty-seven periphyton taxa belonging to 43 genera were recorded throughout the study sites and periods. Periphyton species richness, abundance and stable isotope signatures differed significantly among sites but not among seasons. The lower sections of the Kowie River were polluted by anthropogenic sources as indicated by the high periphytic isotopic nitrogen values (7.9–15.2‰) compared to the pristine upstream sites (4–8‰). We recommend that researchers use a combination of community structure and stable isotope measurements to monitor the periphyton in lotic systems.
- Full Text:
- Date Issued: 2015
Constructing sexualities: a critical overview of articles published in Feminism and Psychology
- Marx, Jacqueline, Donaldson, Natalie
- Authors: Marx, Jacqueline , Donaldson, Natalie
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/142040 , vital:38044 , DOI: 10.1177/0959353515572704
- Description: How have sexualities been dealt with in articles published in Feminism and Psychology since the inception of the journal in 1991? The idea for this overview arose from our experience of designing a critical sexualities course for graduate students in psychology. The articles featured in this overview form part of a Virtual Special Issue that can be located on the Feminism and Psychology website. Virtual Special Issues (VSI) are collections of previously published articles, which have been compiled by guest editors who are experts in the field. VSIs provide readers with an overview of feminist thought about a topic or theme, as well as an easy way to locate pertinent articles. Scholars who are approaching a new topic may find a VSI especially useful, as will instructors who are preparing course syllabi. This article introduces the Constructing Sexualities VSI.
- Full Text:
- Date Issued: 2015
- Authors: Marx, Jacqueline , Donaldson, Natalie
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/142040 , vital:38044 , DOI: 10.1177/0959353515572704
- Description: How have sexualities been dealt with in articles published in Feminism and Psychology since the inception of the journal in 1991? The idea for this overview arose from our experience of designing a critical sexualities course for graduate students in psychology. The articles featured in this overview form part of a Virtual Special Issue that can be located on the Feminism and Psychology website. Virtual Special Issues (VSI) are collections of previously published articles, which have been compiled by guest editors who are experts in the field. VSIs provide readers with an overview of feminist thought about a topic or theme, as well as an easy way to locate pertinent articles. Scholars who are approaching a new topic may find a VSI especially useful, as will instructors who are preparing course syllabi. This article introduces the Constructing Sexualities VSI.
- Full Text:
- Date Issued: 2015
Keeping food on the table: responses and changing coastal fisheries in Solomon Islands
- Albert, Simon, Aswani, Shankar, Fisher, Paul L, Albert, Joelle
- Authors: Albert, Simon , Aswani, Shankar , Fisher, Paul L , Albert, Joelle
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70593 , vital:29678 , https://doi.org/10.1371/journal.pone.0130800
- Description: Globally the majority of commercial fisheries have experienced dramatic declines in stock and catch. Likewise, projections for many subsistence fisheries in the tropics indicate a dramatic decline is looming in the coming decades. In the Pacific Islands coastal fisheries provide basic subsistence needs for millions of people. A decline in fish catch would therefore have profound impacts on the health and livelihoods of these coastal communities. Given the decrease in local catch rates reported for many coastal communities in the Pacific, it is important to understand if fishers have responded to ecological change (either by expanding their fishing range and/or increasing their fishing effort), and if so, to evaluate the costs or benefits of these responses. We compare data from fish catches in 1995 and 2011 from a rural coastal community in Solomon Islands to examine the potentially changing coastal reef fishery at these time points. In particular we found changes in preferred fishing locations, fishing methodology and catch composition between these data sets. The results indicate that despite changes in catch rates (catch per unit effort) between data collected in 2011 and 16 years previously, the study community was able to increase gross catches through visiting fishing sites further away, diversifying fishing methods and targeting pelagic species through trolling. Such insight into local-scale responses to changing resources and/ or fisheries development will help scientists and policy makers throughout the Pacific region in managing the region’s fisheries in the future.
- Full Text:
- Date Issued: 2015
- Authors: Albert, Simon , Aswani, Shankar , Fisher, Paul L , Albert, Joelle
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70593 , vital:29678 , https://doi.org/10.1371/journal.pone.0130800
- Description: Globally the majority of commercial fisheries have experienced dramatic declines in stock and catch. Likewise, projections for many subsistence fisheries in the tropics indicate a dramatic decline is looming in the coming decades. In the Pacific Islands coastal fisheries provide basic subsistence needs for millions of people. A decline in fish catch would therefore have profound impacts on the health and livelihoods of these coastal communities. Given the decrease in local catch rates reported for many coastal communities in the Pacific, it is important to understand if fishers have responded to ecological change (either by expanding their fishing range and/or increasing their fishing effort), and if so, to evaluate the costs or benefits of these responses. We compare data from fish catches in 1995 and 2011 from a rural coastal community in Solomon Islands to examine the potentially changing coastal reef fishery at these time points. In particular we found changes in preferred fishing locations, fishing methodology and catch composition between these data sets. The results indicate that despite changes in catch rates (catch per unit effort) between data collected in 2011 and 16 years previously, the study community was able to increase gross catches through visiting fishing sites further away, diversifying fishing methods and targeting pelagic species through trolling. Such insight into local-scale responses to changing resources and/ or fisheries development will help scientists and policy makers throughout the Pacific region in managing the region’s fisheries in the future.
- Full Text:
- Date Issued: 2015
Scientific frontiers in the management of coral reefs
- Aswani, Shankar, Mumby, Peter J, Baker, Andrew, Christie, Patrick, McCook, Laurence J, Steneck, Robert S, Richmond, Robert H
- Authors: Aswani, Shankar , Mumby, Peter J , Baker, Andrew , Christie, Patrick , McCook, Laurence J , Steneck, Robert S , Richmond, Robert H
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70582 , vital:29677 , https://doi.org/10.3389/fmars.2015.00050
- Description: Coral reefs are subjected globally to a variety of natural and anthropogenic stressors that often act synergistically. Today, reversing ongoing and future coral reef degradation presents significant challenges and countering this negative trend will take considerable efforts and investments. Scientific knowledge can inform and guide the requisite decision-making process and offer practical solutions to the problem of protection as the effects of climate change exacerbate. However, implementation of solutions presently lags far behind the pace required to reverse global declines, and there is a need for an urgent and significant step-up in the extent and range of strategies being implemented. In this paper, we consider scientific frontiers in natural and social science research that can help build stronger support for reef management and improve the efficacy of interventions. We cover various areas including: (1) enhancing the case for reef conservation and management, (2) dealing with local stressors on reefs, (3) addressing global climate change impacts, (4) and reviewing various approaches to the governance of coral reefs. In sum, we consider scientific frontiers in natural and social science that will require further attention in coming years as managers work toward building stronger support for reef management and improve the efficacy of local interventions.
- Full Text:
- Date Issued: 2015
- Authors: Aswani, Shankar , Mumby, Peter J , Baker, Andrew , Christie, Patrick , McCook, Laurence J , Steneck, Robert S , Richmond, Robert H
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/70582 , vital:29677 , https://doi.org/10.3389/fmars.2015.00050
- Description: Coral reefs are subjected globally to a variety of natural and anthropogenic stressors that often act synergistically. Today, reversing ongoing and future coral reef degradation presents significant challenges and countering this negative trend will take considerable efforts and investments. Scientific knowledge can inform and guide the requisite decision-making process and offer practical solutions to the problem of protection as the effects of climate change exacerbate. However, implementation of solutions presently lags far behind the pace required to reverse global declines, and there is a need for an urgent and significant step-up in the extent and range of strategies being implemented. In this paper, we consider scientific frontiers in natural and social science research that can help build stronger support for reef management and improve the efficacy of interventions. We cover various areas including: (1) enhancing the case for reef conservation and management, (2) dealing with local stressors on reefs, (3) addressing global climate change impacts, (4) and reviewing various approaches to the governance of coral reefs. In sum, we consider scientific frontiers in natural and social science that will require further attention in coming years as managers work toward building stronger support for reef management and improve the efficacy of local interventions.
- Full Text:
- Date Issued: 2015
The palladacycle, AJ-5, exhibits anti-tumour and anti-cancer stem cell activity in breast cancer cells:
- Aliwaini, Saeb, Peres, Jade, Kröger, Wendy L, Blanckenberg, Angelique, de la Mare, Jo-Anne, Edkins, Adrienne L, Mapolie, Selwyn, Prince, Sharon
- Authors: Aliwaini, Saeb , Peres, Jade , Kröger, Wendy L , Blanckenberg, Angelique , de la Mare, Jo-Anne , Edkins, Adrienne L , Mapolie, Selwyn , Prince, Sharon
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/164874 , vital:41180 , DOI: 10.1016/j.canlet.2014.11.027
- Description: Breast cancer is the most common malignancy amongst women worldwide but despite enormous efforts to address this problem, there is still limited success with most of the current therapeutic strategies. The current study describes the anti-cancer activity of a binuclear palladacycle complex (AJ-5) in oestrogen receptor positive (MCF7) and oestrogen receptor negative (MDA-MB-231) breast cancer cells as well as human breast cancer stem cells. AJ-5 is shown to induce DNA double strand breaks leading to intrinsic and extrinsic apoptosis and autophagy cell death pathways which are mediated by the p38 MAP kinase. This study provides evidence that AJ-5 is potentially an effective compound in the treatment of breast cancer.
- Full Text:
- Date Issued: 2015
- Authors: Aliwaini, Saeb , Peres, Jade , Kröger, Wendy L , Blanckenberg, Angelique , de la Mare, Jo-Anne , Edkins, Adrienne L , Mapolie, Selwyn , Prince, Sharon
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/164874 , vital:41180 , DOI: 10.1016/j.canlet.2014.11.027
- Description: Breast cancer is the most common malignancy amongst women worldwide but despite enormous efforts to address this problem, there is still limited success with most of the current therapeutic strategies. The current study describes the anti-cancer activity of a binuclear palladacycle complex (AJ-5) in oestrogen receptor positive (MCF7) and oestrogen receptor negative (MDA-MB-231) breast cancer cells as well as human breast cancer stem cells. AJ-5 is shown to induce DNA double strand breaks leading to intrinsic and extrinsic apoptosis and autophagy cell death pathways which are mediated by the p38 MAP kinase. This study provides evidence that AJ-5 is potentially an effective compound in the treatment of breast cancer.
- Full Text:
- Date Issued: 2015
Breast cancer: current developments in molecular approaches to diagnosis and treatment
- de la Mare, Jo-Anne, Contu, Lara, Hunter, Morgan C, Moyo, Buhle, Sterrenberg, Jason N, Dhanani, Karim C H, Mutsvunguma, Lorraine Z, Edkins, Adrienne L
- Authors: de la Mare, Jo-Anne , Contu, Lara , Hunter, Morgan C , Moyo, Buhle , Sterrenberg, Jason N , Dhanani, Karim C H , Mutsvunguma, Lorraine Z , Edkins, Adrienne L
- Date: 2014
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/164819 , vital:41175 , DOI: 10.2174/15748928113086660046
- Description: Due to the high heterogeneity of breast cancers, numerous recent patents describe improved methods of detection and classification which promise better patient prognosis and treatment. In particular, there has been a shift towards more effective genetic screening to identify specific mutations associated with breast tumours, which may lead to “personalised medicine” with improved outcomes. Two challenging areas of breast cancer research involve the development of treatments for the highly aggressive triple negative breast cancer subtype as well as the chemotherapy-resistant cancer stem cell subpopulation. In addition, despite numerous recent advances in breast cancer treatment in woman, male breast cancer remains poorly understood and there are limited therapies available which are developed specifically for men. This review serves to report on important developments in the treatment of breast malignancies patented in the past two years as well as to highlight the current gaps in the field of breast cancer therapeutics and areas which require further study.
- Full Text:
- Date Issued: 2014
- Authors: de la Mare, Jo-Anne , Contu, Lara , Hunter, Morgan C , Moyo, Buhle , Sterrenberg, Jason N , Dhanani, Karim C H , Mutsvunguma, Lorraine Z , Edkins, Adrienne L
- Date: 2014
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/164819 , vital:41175 , DOI: 10.2174/15748928113086660046
- Description: Due to the high heterogeneity of breast cancers, numerous recent patents describe improved methods of detection and classification which promise better patient prognosis and treatment. In particular, there has been a shift towards more effective genetic screening to identify specific mutations associated with breast tumours, which may lead to “personalised medicine” with improved outcomes. Two challenging areas of breast cancer research involve the development of treatments for the highly aggressive triple negative breast cancer subtype as well as the chemotherapy-resistant cancer stem cell subpopulation. In addition, despite numerous recent advances in breast cancer treatment in woman, male breast cancer remains poorly understood and there are limited therapies available which are developed specifically for men. This review serves to report on important developments in the treatment of breast malignancies patented in the past two years as well as to highlight the current gaps in the field of breast cancer therapeutics and areas which require further study.
- Full Text:
- Date Issued: 2014
Climate Change and Environmental Challenges in Southern African Development Community (SADC): Responses in the Age of Globalisation
- Chikunda, Charles, Mandikonza, Caleb
- Authors: Chikunda, Charles , Mandikonza, Caleb
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , book chapter
- Identifier: http://hdl.handle.net/10962/437249 , vital:73363 , ISBN 9789462098367 , https://brill.com/display/book/9789462098367/BP000009.xml
- Description: There is evidence that one of the greatest controversies facing Africa today is how to make sense of the two leading global intentions of the 21st century: sustainable development and globalisation. These two paradigms appear to have some op-posing tendencies within them, some of which are contestable. Globalisation advocates for liberalisation; reduction or elimina-tion of state regulations on the market, free reign, and a high degree of rights to the large corporations that dominate the market. Globalisation also entails the cross flow of knowledge and knowledge forms.
- Full Text:
- Date Issued: 2014
- Authors: Chikunda, Charles , Mandikonza, Caleb
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , book chapter
- Identifier: http://hdl.handle.net/10962/437249 , vital:73363 , ISBN 9789462098367 , https://brill.com/display/book/9789462098367/BP000009.xml
- Description: There is evidence that one of the greatest controversies facing Africa today is how to make sense of the two leading global intentions of the 21st century: sustainable development and globalisation. These two paradigms appear to have some op-posing tendencies within them, some of which are contestable. Globalisation advocates for liberalisation; reduction or elimina-tion of state regulations on the market, free reign, and a high degree of rights to the large corporations that dominate the market. Globalisation also entails the cross flow of knowledge and knowledge forms.
- Full Text:
- Date Issued: 2014
Differential motif enrichment analysis of paired ChIP-seq experiments
- Lesluyes, Tom, Johnson, James, Machanick, Philip, Bailey, Timothy L
- Authors: Lesluyes, Tom , Johnson, James , Machanick, Philip , Bailey, Timothy L
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/439250 , vital:73559 , https://doi.org/10.1186/1471-2164-15-752
- Description: Motif enrichment analysis of transcription factor ChIP-seq data can help identify transcription factors that cooperate or compete. Previously, little attention has been given to comparative motif enrichment analysis of pairs of ChIP-seq experiments, where the binding of the same transcription factor is assayed under different conditions. Such comparative analysis could potentially identify the distinct regulatory partners/competitors of the assayed transcription factor under different conditions or at different stages of development.
- Full Text:
- Date Issued: 2014
- Authors: Lesluyes, Tom , Johnson, James , Machanick, Philip , Bailey, Timothy L
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/439250 , vital:73559 , https://doi.org/10.1186/1471-2164-15-752
- Description: Motif enrichment analysis of transcription factor ChIP-seq data can help identify transcription factors that cooperate or compete. Previously, little attention has been given to comparative motif enrichment analysis of pairs of ChIP-seq experiments, where the binding of the same transcription factor is assayed under different conditions. Such comparative analysis could potentially identify the distinct regulatory partners/competitors of the assayed transcription factor under different conditions or at different stages of development.
- Full Text:
- Date Issued: 2014
E-Literacy training in deep rural areas: The Siyakhula Living Lab experience
- Gumbo, Sibukelo, Ntšekhe, Mathe, Terzoli, Alfredo
- Authors: Gumbo, Sibukelo , Ntšekhe, Mathe , Terzoli, Alfredo
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/431411 , vital:72772 , http://proceedings.e-skillsconference.org/2014/e-skills141-154Gumbo824.pdf
- Description: Within the discourse of broadband deployment in poor areas (particular-ly rural), very little attention is generally put on the critical enabler repre-sented by e-literacy training that empowers people to use ICT systems, especially in the form of full-fledged machines such as fixed, tower and laptop computers (These machines are still more preferable for growing a generation of ‘producers’ as opposed to ‘consumers’ in the ICT space.) This paper reports on the experience in running e-literacy in a deep rural area, as part of the Siyakhula Living Lab (SLL), whose end goal is to diffuse production oriented ICTs in poor areas of South Africa and Africa. In particular it will expand on the feedback given by the par-ticipants to the last edition of the e-literacy course, run in the first se-mester of 2014. The lessons learned from this experience include: the need for linguistic localization of the learning material or at least part of its presentation; the importance of teaching and learning that facilitates (easy) transfer of knowledge gained to other ICT settings (such as mo-biles; or uses to support business); and the importance of face-to-face courses to allow real interaction with the people living in the targeted areas, partly as a strategic means to forging relations towards the reali-zation of the Living Lab vision (co-creation of solutions with empowered users). Altogether, e-literacy courses have proved to be critical to the broad aim of SLL of ‘activating’the segment of society living in poor ar-eas towards self-determination. A small but telling indicator is the trans-formation in the view people have of themselves once certified as e-literate.
- Full Text:
- Date Issued: 2014
- Authors: Gumbo, Sibukelo , Ntšekhe, Mathe , Terzoli, Alfredo
- Date: 2014
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/431411 , vital:72772 , http://proceedings.e-skillsconference.org/2014/e-skills141-154Gumbo824.pdf
- Description: Within the discourse of broadband deployment in poor areas (particular-ly rural), very little attention is generally put on the critical enabler repre-sented by e-literacy training that empowers people to use ICT systems, especially in the form of full-fledged machines such as fixed, tower and laptop computers (These machines are still more preferable for growing a generation of ‘producers’ as opposed to ‘consumers’ in the ICT space.) This paper reports on the experience in running e-literacy in a deep rural area, as part of the Siyakhula Living Lab (SLL), whose end goal is to diffuse production oriented ICTs in poor areas of South Africa and Africa. In particular it will expand on the feedback given by the par-ticipants to the last edition of the e-literacy course, run in the first se-mester of 2014. The lessons learned from this experience include: the need for linguistic localization of the learning material or at least part of its presentation; the importance of teaching and learning that facilitates (easy) transfer of knowledge gained to other ICT settings (such as mo-biles; or uses to support business); and the importance of face-to-face courses to allow real interaction with the people living in the targeted areas, partly as a strategic means to forging relations towards the reali-zation of the Living Lab vision (co-creation of solutions with empowered users). Altogether, e-literacy courses have proved to be critical to the broad aim of SLL of ‘activating’the segment of society living in poor ar-eas towards self-determination. A small but telling indicator is the trans-formation in the view people have of themselves once certified as e-literate.
- Full Text:
- Date Issued: 2014