Generalized linear models, with applications in fisheries research
- Authors: Sidumo, Bonelwa
- Date: 2018
- Subjects: Western mosquitofish , Analysis of variance , Fisheries Catch effort South Africa Sundays River (Eastern Cape) , Linear models (Statistics) , Multilevel models (Statistics) , Experimental design
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61102 , vital:27975
- Description: Gambusia affinis (G. affinis) is an invasive fish species found in the Sundays River Valley of the Eastern Cape, South Africa, The relative abundance and population dynamics of G. affinis were quantified in five interconnected impoundments within the Sundays River Valley, This study utilised a G. affinis data set to demonstrate various, classical ANOVA models. Generalized linear models were used to standardize catch per unit effort (CPUE) estimates and to determine environmental variables which influenced the CPUE, Based on the generalized linear model results dam age, mean temperature, Oreochromis mossambicus abundance and Glossogobius callidus abundance had a significant effect on the G. affinis CPUE. The Albany Angling Association collected data during fishing tag and release events. These data were utilized to demonstrate repeated measures designs. Mixed-effects models provided a powerful and flexible tool for analyzing clustered data such as repeated measures data and nested data, lienee it has become tremendously popular as a framework for the analysis of bio-behavioral experiments. The results show that the mixed-effects methods proposed in this study are more efficient than those based on generalized linear models. These data were better modeled with mixed-effects models due to their flexibility in handling missing data.
- Full Text:
- Date Issued: 2018
- Authors: Sidumo, Bonelwa
- Date: 2018
- Subjects: Western mosquitofish , Analysis of variance , Fisheries Catch effort South Africa Sundays River (Eastern Cape) , Linear models (Statistics) , Multilevel models (Statistics) , Experimental design
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61102 , vital:27975
- Description: Gambusia affinis (G. affinis) is an invasive fish species found in the Sundays River Valley of the Eastern Cape, South Africa, The relative abundance and population dynamics of G. affinis were quantified in five interconnected impoundments within the Sundays River Valley, This study utilised a G. affinis data set to demonstrate various, classical ANOVA models. Generalized linear models were used to standardize catch per unit effort (CPUE) estimates and to determine environmental variables which influenced the CPUE, Based on the generalized linear model results dam age, mean temperature, Oreochromis mossambicus abundance and Glossogobius callidus abundance had a significant effect on the G. affinis CPUE. The Albany Angling Association collected data during fishing tag and release events. These data were utilized to demonstrate repeated measures designs. Mixed-effects models provided a powerful and flexible tool for analyzing clustered data such as repeated measures data and nested data, lienee it has become tremendously popular as a framework for the analysis of bio-behavioral experiments. The results show that the mixed-effects methods proposed in this study are more efficient than those based on generalized linear models. These data were better modeled with mixed-effects models due to their flexibility in handling missing data.
- Full Text:
- Date Issued: 2018
Some ionospheric effects observed at sunrise
- Authors: Baker, D C
- Date: 1964
- Subjects: Sun -- Rising and setting , Ionosphere -- Research
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5513 , http://hdl.handle.net/10962/d1009496 , Sun -- Rising and setting , Ionosphere -- Research
- Description: The study of the ionosphere over the sunrise period is necessary for an understanding of the vtiriations in layer structure with time and has been a topic of research of many workers. On the whole these investigations have been restricted to a study of critical frequency variations with relatively short intervals of a few minutes between successive records, of N-h curves deduced from ionograms with long intervals (15 minutes or so) between successive N-h curves or of continuously monitored single frequency reflections. Not one of the three techniques is entirely satisfactory for a detailed study of ionospheric behaviour over sunrise. The first two do not give a sufficiently clear indication of what happens in the initial stages of layer development, while from the third incomplete data is obtained as to what is happening at a specific electron-density level. For this reason a preliminary investigation of the ionosphere over sunrise was made at Rhodes University during August, 1959. The records were obtained at four-and-a-half minute intervals and scaled by the method of KELSO (1952 ). "Many of t he results were inconclusive but it appeared that records would have to be taken at approximately one minute intervals and reduced to N-h curves by a scaling technique which made full allowance for low-level ionization if useful results were to be obtained. An attempt has been made in this thesis to investigate the behaviour of the ionosphere over sunrise more fully than can be done by the three techniques referred to. A number of observed phenomena are also examined. Part I deals with the theoretical background to ionosphere physics in general and describes the equipment, equipment modifications and experimental procedure. Part II presents the results obtained. The records for a largescale travelling disturbance are analysed. Various observed phenomena are described and discussed. A simple method of obtaining production rates from experimental data is described. The implications of the observed variations of production rates with height and time are discussed. Suggestions for further research and improvement of the methods used arc made in Charter 9.
- Full Text:
- Date Issued: 1964
- Authors: Baker, D C
- Date: 1964
- Subjects: Sun -- Rising and setting , Ionosphere -- Research
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5513 , http://hdl.handle.net/10962/d1009496 , Sun -- Rising and setting , Ionosphere -- Research
- Description: The study of the ionosphere over the sunrise period is necessary for an understanding of the vtiriations in layer structure with time and has been a topic of research of many workers. On the whole these investigations have been restricted to a study of critical frequency variations with relatively short intervals of a few minutes between successive records, of N-h curves deduced from ionograms with long intervals (15 minutes or so) between successive N-h curves or of continuously monitored single frequency reflections. Not one of the three techniques is entirely satisfactory for a detailed study of ionospheric behaviour over sunrise. The first two do not give a sufficiently clear indication of what happens in the initial stages of layer development, while from the third incomplete data is obtained as to what is happening at a specific electron-density level. For this reason a preliminary investigation of the ionosphere over sunrise was made at Rhodes University during August, 1959. The records were obtained at four-and-a-half minute intervals and scaled by the method of KELSO (1952 ). "Many of t he results were inconclusive but it appeared that records would have to be taken at approximately one minute intervals and reduced to N-h curves by a scaling technique which made full allowance for low-level ionization if useful results were to be obtained. An attempt has been made in this thesis to investigate the behaviour of the ionosphere over sunrise more fully than can be done by the three techniques referred to. A number of observed phenomena are also examined. Part I deals with the theoretical background to ionosphere physics in general and describes the equipment, equipment modifications and experimental procedure. Part II presents the results obtained. The records for a largescale travelling disturbance are analysed. Various observed phenomena are described and discussed. A simple method of obtaining production rates from experimental data is described. The implications of the observed variations of production rates with height and time are discussed. Suggestions for further research and improvement of the methods used arc made in Charter 9.
- Full Text:
- Date Issued: 1964
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