Isolation of xylanolytic multi-enzyme complexes from Bacillus subtilis SJ01
- Authors: Jones, Sarah Melissa Jane
- Date: 2010
- Subjects: Bacillus subtilis , Xylans , Multienzyme complexes , Botanical chemistry , Cellulose , Hemicellulose , Polysaccharides
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3974 , http://hdl.handle.net/10962/d1004033 , Bacillus subtilis , Xylans , Multienzyme complexes , Botanical chemistry , Cellulose , Hemicellulose , Polysaccharides
- Description: Cellulose and hemicellulose account for a large portion of the world‘s plant biomass. In nature, these polysaccharides are intertwined forming complex materials that require multiple enzymes to degrade them. Multi-enzyme complexes (MECs) consist of a number of enzymes working in close proximity and synergistically to degrade complex substrates with higher efficiency than individual enzymes. The cellulosome is a cellulolytic MEC produced by anaerobic bacteria that has been studied extensively since its discovery in 1983. The aim of this study was to purify a cellulolytic and/or hemicellulolytic MEC from an aerobic bacterium of the Bacillus genus. Several bacterial isolates were identified using morphological characteristics and 16S rDNA sequencing, and screened for their ability to degrade cellulose and xylan using a MEC. The isolate that produced a high molecular weight protein fraction with the greatest ability to degrade Avicel®, carboxymethyl cellulose (CMC) and birchwood xylan was identified as Bacillus subtilis SJ01. An optimised growth medium, consisting of vitamins, trace elements, birchwood xylan (as the carbon source), and yeast and ammonium sulphate (as the nitrogen sources), increased the production of CMCase and xylanase enzymes from this bacterium. The removal of a competing bacterial strain from the culture and the inhibition of proteases also increased enzyme activities. A growth curve of B. subtilis SJ01 indicated that xylanase production was highest in early stationary growth phase and thus 84 hours was chosen as the best cell harvesting time. To purify the MECs produced by B. subtilis SJ01 size-exclusion chromatography on a Sephacryl S-400 column was used. It was concluded that (for the purposes of this study) the best method of concentrating the culture supernatant prior to loading onto Sephacryl S-400 was the use of ultrafiltration with a 50 kDa cut-off membrane. Two MECs, named C1 and C2 of 371 and 267 kDa, respectively, were purified from the culture supernatant of B. subtilis SJ01. Electrophoretic analysis revealed that these MECs consisted of 16 and 18 subunits, respectively, 4 of which degraded birchwood xylan and 5 of which degraded oat spelt xylan. The MECs degraded xylan substrates (C1: 0.24 U/mg, C2: 0.14 U/mg birchwood xylan) with higher efficiency than cellulose substrates (C1: 0.002 U/mg, C2: 0.01 U/mg CMC), and could therefore be considered xylanosomes. Interestingly, the MECs did not bind to insoluble birchwood xylan or Avicel® and did not contain glycosylated proteins, which are common features of cellulosomes. This study is, therefore, important in revealing the presence of MECs that differ from the cellulosome and that may have particular application in industries requiring high xylanase activity, such as the paper and pulp industry. The abundant genetic information available on B. subtilis means that this organism could also be used for genetic engineering of cellulolytic/hemicellulolytic MECs.
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- Date Issued: 2010
A study of the alkaloid content of the Senecio speciosus/Macrocephalus complex
- Authors: Grue, Margaret Ruth
- Date: 1992
- Subjects: Alkaloids -- Research , Pyrrolizidines -- Research , Botanical chemistry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4362 , http://hdl.handle.net/10962/d1005027 , Alkaloids -- Research , Pyrrolizidines -- Research , Botanical chemistry
- Description: The isolation and identification of pyrrolizidine alkaloids from various plant species from 1988 to May 1991 are reviewed and the alkaloids of two indigenous plant species, Senecio speciosus Willd and Senecio macrocephalus DC, were investigated. A brief review of the methods used for isolation and identification of pyrrolizidines is also given. S. speciosus was found to contain two new alkaloids, 7-senecioyl-9-sarracinylheliotridine and 7-isosarracinyl-9- sarracinyl-heliotridine, which were identified using highfield NMR techniques. A number of other alkaloids were tentatively identified using GC-MS. S. macrocephalus contains very little alkaloid, but a number of pyrrolizidine alkaloids were tentatively identified using GC-MS. Standard alkaloids for GC-MS work were obtained both by extraction from a number of plant species and by synthesis of simple monoester alkaloids. In this process the alkaloid neosarracine, previously described by GC-MS, was isolated and NMR data for this compound are reported for the first time. S. speciosus and S. macrocephalus are morphologically very similar and their counterparts in the Grahamstown district exhibit features characteristic of both species. This could be due to hybridization, genetic mutation or simple variation within the species. The alkaloids of four local plant populations were examined in order to collect taxonomic markers whereby it was hoped that the Grahamstown plants could be satisfactorily classified. Three of the plant populations were found to contain 7-senecioyl-9-sarracinylheliotridine and 7-angelyl-9-sarracinyl-heliotridine. One population was found to contain the known alkaloid retrorsine along with the new alkaloid 2-hydroxy-l, 2-dihydrosenkirkine. The alkaloidal fractions of all four populations were compared using GC-MS and NMR techniques. Tentative taxonomic conclusions were drawn.
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- Date Issued: 1992