The effects of the type of rest breaks on return-to-task performance in semi-automated tasks with varying complexities
- Authors: Hoyi, Zandile
- Date: 2017
- Subjects: Rest periods , Rest periods -- Physiological effect , Human-robot interaction , Aeronautics -- Human factors , Human engineering , Drowsiness
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/44490 , vital:25412
- Description: Automation in the aviation industry is acknowledged as a useful tool in reducing pilot workload (Hoh, Smith & Hinton, 1987; Beringer & Harris Jr., 1999). Typically, the role of the pilot (operator) shifts from active participation in a process to a task of monitoring the system with the resumption of control should the automation ‘fail’ (Byrne & Parasuraman, 1996). Unfortunately, the skills necessary to do so would likely degrade from non-use, during this process (Landry, 2012). This project investigates the “attentional demands” for the human operator during interaction with semi-automated operations of the flight. According to Dr Abbott (1996), FAA human factors specialist, one of the problems causing disharmony between crews and their automated systems is the incorrect upset recovery, owing to the human being out-of-the-loop (OOTL) from the system. Recovery, or rather return to task, is the ability of the pilot to loop back into control, once situational awareness has been decreased due to lack of alertness and a decrease in arousal. Different types of rest tasks are commonly prescribed fatigue countermeasures in the industrial setting and have been showed to elicit beneficial effects on prolonged human performance. Understanding the effects of different rest break activity and time out-of-the-loop during semi-automated flying on return to task performance has been adequately studied, thus highlighting its importance in the context of flight safety. The present study requested participants to perform a tracking task in a laboratory where they changed from activity (30 minutes) to a break (2 vs. 30 minutes) and back to the activity (20 minutes). The task varied in the complexity of the activity (pure tracking vs. tracking plus memory plus rule-based decision making), the type of break (passive rest vs. actively supervising) and the duration of the break (2 minutes vs. 30 minutes). Performance was measured as effective response time in the tracking task and number of correct responses to secondary cognitive tasks. Physiological measures included heart rate (HR), heart rate variability (HRV- time and frequency-domain), eye blink frequency and duration. The Karolinska Sleepiness Scale was used as a subjective measure. With regards to the most appropriate rest break tasks, the study concluded that active, administrative tasks, which allowed the operator to maintain some form of situational awareness by monitoring the automated system, achieved favourable effects of being more alert than the passive rest break of being disengaged from the system. In terms of the most appropriate rest break durations, the shorter duration of being out-of-the-loop from controlling the system proved to be more advantageous than the longer out-of-the-loop duration. In looking at the workload levels of arousal, the results suggest that the higher workload level is better at maintaining the alertness of operators. This study functions as a foundational framework for future investigations around the topic of human-automation interaction, looking specifically at return-to-task performance.
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The identification of key vulnerability components within Solomon Islands coastal communities
- Authors: Malherbe, Willem Stefanus
- Date: 2017
- Subjects: Solomon Islands -- Environmental conditions , Coastal ecology -- Solomon Islands , Island ecology -- Solomon Islands , Climatic changes -- Solomon Islands , Sociology, Urban -- Solomon Islands , Sociology, Rural -- Solomon Islands
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:21184 , http://hdl.handle.net/10962/6827
- Description: The impacts of climate change are disproportionally felt across the planet, with small island developing states some of the countries most at risk. Furthermore, climate change may compound existing problems such as over harvested resources, leading to knock-on effects on national economies. Both direct and indirect stressors may impact communities differently based on their level of exposure to stressors, their intrinsic sensitivity to these stressors, and their ability to adapt to stressors. This study aims to answer the primary research question: Why are some communities more vulnerable than others? A vulnerability assessment is used to identify both vulnerable and non-vulnerable attributes of Solomon Islands’ communities. Surveys comprised a comprehensive questionnaire to draw inference on each vulnerability category; sensitivity, exposure and adaptive capacity, along with their various components and subcomponents. An analysis of household and community livelihood strategies was conducted to compliment vulnerability scores and provide a deeper understanding of livelihood practises. As is expected of small island states, exposure presents the biggest threat to coastal communities. Within this category, environmental changes and personal exposure from shoreline erosion and safety at sea provide evidence of high vulnerability. Within the sensitivity category, the cultural importance of fishing, as well as attachment to place and fishing, renders communities more vulnerable. Simultaneously, local ecological knowledge and economic dependence on resources other than fishing proved to be resilient attributes by decreasing vulnerability. Low vulnerability scores for the adaptive capacity category were achieved by communities where physical capital, such as community infrastructure, was evident. A lack of both institutional support and bridging of social capital were attributes which contributed to community vulnerability. This study has identified key attributes that have both positive and negative effects on the vulnerability of Solomon Islands communities. Having done this, I have also attempted to determine the drivers that render some attributes more vulnerable than others. It is acknowledged that the drivers of all key attributes of vulnerability is required to determine areas where adaptation plans will be most effective. Importantly, drivers of high vulnerability should not be considered as the primary focus of adaptation planning, but also the drivers of low vulnerability, such as community cohesion, which provide resilience within communities.
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The influence of environmental variability on the catch of chokka, Loligo reynaudii, off the coast of South Africa
- Authors: Joyner, Jessica Mary
- Date: 2017
- Subjects: Loligo reynaudii , Loligo fisheries -- South Africa , Squid fisheries -- South Africa , Loligo fisheries -- Environmental aspects -- South Africa , Squid fisheries -- Environmental aspects - South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/32130 , vital:24013
- Description: Globally, cephalopod fisheries are being relied on more heavily due to the depletion of longer-lived teleost species. The South African chokka squid (Loligo reynaudii) fishery is a case in point. Although previously numerous squid were often caught as bycatch, the fishery has officially been in place since 1985. Since the inception of the chokka fishery in South Africa, several studies have investigated the relationship between environmental drivers and annual chokka squid catch, with varying degrees of success. Recently, in 2013, chokka squid catches hit a record low, prompting resurgence in the topic of the squid environment-catch relationship. This study was initiated in an attempt to provide a quantitative relationship between the chokka squid catch and environmental variability, and to build a predictive model that could be used in fisheries management strategies. Historical data were obtained from various sources and included the mean and standard deviation in ocean bottom temperature; the mean and standard deviation in sea surface temperature; the maximum and minimum as well as the variation in wind speed; the mean, predominant and standard deviation in wind direction; the mean and standard deviation in atmospheric pressure; the mean chlorophyll concentration; the number of upwelling events; the hours of easterly winds blowing per day; and two large variation-in-climate indices, namely, the oceanic Nino index and the Antarctic Oscillation index. The monthly catch data were also provided. These data were initially analysed for inter-annual and intra-annual cyclic trends and followed by analysis of the delay in response of catch to the environmental variables, anticipating some impact on the different stages of the chokka life cycle. These lagged data were incorporated into a negative binomial generalised linear model, as well as a generalised additive model, which revealed a strong relationship (r²=0.707) between the catch and environmental variability. The inclusion of all the parameters was necessary; however, the mean bottom temperature and the standard deviation in sea surface temperature were the only parameters that had a significant effect on the catch. These results were used to build a predictive model that indicated that, although the relationship was strong, the ability of the model to predict catch was weak, particularly from the year 2005 onwards.
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The interaction of selected bacteria with tailored electrospun fibres: towards future applications in bioremediation, bacterial inactivation and electricity generation
- Authors: Mfuku, Aphiwe
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/65123 , vital:28693
- Description: Expected release date-May 2019
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The pest status and integrated management programme of carob moth, Ectomyelois ceratoniae Zeller, attacking citrus in South Africa
- Authors: Thackeray, Sean Robin
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/7758 , vital:21293
- Description: The carob moth, Ectomyelois ceratoniae Zeller, is a pest of agricultural commodities and stored products around the world. Carob moth is known to infest citrus in the Mediterranean region and in southern Africa. In grapefruit cultivars, carob moth infestations are associated with high levels of mealybug. However, although this relationship has been observed in other citrus types such as Navel oranges, this has never been quantified. A recent survey of infested fruit from various production areas in South Africa indicated that the pest status of carob moth on Navel oranges may have been underestimated. As a result of the incidental pest status of carob moth on citrus in South Africa in the past, a species specific integrated pest management (IPM) programme does not exist. Therefore, the overriding aim of this theses was to evaluate the pest status of carob moth in citrus and establish a species specific IPM programme by determine the autecology of carob moth in citrus. Reliable methods for monitoring carob moth in citrus orchards both for producers and for research purposes were developed. A user-friendly monitoring method for determining weekly carob moth infestation through dropped fruit was suitable for producers. A timed scouting method was also developed; although the accuracy of this method varied with the experience of the scout. The pest status of carob moth was highest in the Loskop Valley, Nelspruit and the Vaalharts production areas and economic injury to growers ranged from R512.35 to R3 719.80 per hectare as a direct result of infestation. No infestation was recorded in the Sundays River Valley and Citrusdal production areas over both the 2014-15 and 201516 growing seasons. A laboratory study showed the survival of carob moth larvae infesting citrus is less than 10% in the absence of mealybug. However, this increases to almost 40% in the presence of mealybug residues and sooty mould. There was a significant relationship between carob infestation at harvest and mealybug infestation in the middle months of the growing season. The relationship between carob moth and mealybug indicates that current production guidelines for the management of mealybug in citrus may need to be amended. Consequently, it is proposed that an orchard with a history of carob moth infestation and a high mealybug infestation in the previous season should be subjected to an early season preventative application of a registered control product. Also, if mealybug infestation in December is higher than a 5% of fruit per tree, then a corrective application of a registered product is recommended. The application of 2,4-D at petal drop reduced the size of the navel-end opening, decreasing the proportion of mealybug found in the navel-end, subsequently reducing carob moth infestation, resulting in a direct benefit for producers. Products registered for the control of false codling moth (FCM), Thaumatotibia leucotreta Meyrick, were effective in reducing carob moth infestation. In a spray trial conducted over two seasons, Delegate® and Runner® reduced infestation significantly in the 2014-15 season (over 80%), while only Delegate® was effective in the 2015-16 season (over 80%). If a late season corrective chemical application is targeted at both FCM and carob moth, this application should take place between 6-7 weeks prior to harvest. The mating disruption product, SPLAT® EC, reduced carob moth infestation by 70% compared to the untreated control. A laboratory culture was established and head-capsule size categories were determined for all five carob moth instars. A parasitoid survey indicated that parasitism of carob moth larvae is generally less than 5% in citrus orchards and a new species of Braconidae was described as Phanterotoma carobivora van Achterberg and Thackeray. Carob moth fifth instar were found to be the most cold-tolerant larval stage, and were shown to be more cold susceptible than the most cold-tolerant FCM instars at -0.55ºC for eighteen days. This cold treatment resulted in a mortality of 94.6% fifth instar carob moth compared to a combined fourth and fifth instar mortality of 87.8% for FCM after eighteen days. These results indicate that post-harvest cold treatments targeting FCM will be as, if not more, effective against carob moth, suggesting that current phytosanitary legislation for carob moth should be amended to incorporate this study’s findings.
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The potential of hydrellia egeriae rodrigues (diptera: ephydridae) as a biocontrol agent for egeria densa planch. (hydrocharitaceae) in South Africa
- Authors: Smith, Rosali
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/53733 , vital:26314
- Description: The integrity of South Africa’s valuable freshwater ecosystems has been threatened by aquatic invasive plants since the 1900s. Floating aquatic weeds, such as Eichhornia crassipes (C. Mart) Solms (Pondederiaceae), Pistia stratiotes L. (Araceae), Salvinia molesta D.S. Mitchell (Salviniaceae), Azolla filiculoides Lam. (Azollaceae), and the emergent weed, Myriophyllum aquaticum Verdc. (Haloragaceae) benefited from open, nutrient-rich water bodies. Due to the limitations of mechanical and chemical control in aquatic environments, classical biological control has been a huge asset in managing these weeds; consequently bringing them under complete or substantial control. However, submerged aquatic weeds are widely distributed through the aquarium trade in South Africa; facilitating their invasion into new habitats. The removal of surface mats following the successful management of floating weeds has enhanced the growth and competitive ability of submerged aquatic weeds, such as Hydrilla verticillata (L.f.) Royle (Hydrocharitaceae), Myriophyllum spicatum L. (Haloragaceae) and Egeria densa Planch. (Hydrocharitaceae) in South Africa. Of these species, E. densa has become the most widely distributed, invading numerous systems across South Africa. Compared to other exotic submerged aquatic plants, E. densa is the only species capable of inhabiting freshwater systems in every province and therefore, it is vital to manage existing populations and prevent its further distribution and invasion. Hydrellia spp. (Diptera: Ephydridae) biological control agents have been used extensively in the management of submerged aquatic weeds elsewhere, particularly those in the Hydrocharitaceae (Balciunas and Burrows 1996; Wheeler and Center 2001. Hydrellia egeriae Rodrigues (Diptera: Ephydridae) has been identified as a promising candidate for E. densa and was imported into quarantine at Rhodes University, Grahamstown in 2014. The aims of this study were to conduct a pre-release assessment of the potential of H. egeriae as a biological control agent for E. densa in South Africa. The first objective of this study was to establish the life history of the agent under controlled conditions on E. densa found in South Africa, as well as its population growth parameters to predict its invasion success in the field. Secondly, laboratory host-specificity testing was conducted to validate the host range of the agent, in view of published native range host-specificity testing, and to establish potential risks to non-target species, should it be released. Finally, a biological control agent should also effectively reduce the fitness of its host plant, and therefore, impact studies were conducted. Laboratory impact studies have been limited in the past, in that they only investigate agent damage for short ecological periods, thus underestimating the damage capacity of the agent under investigation. Therefore, the damage capacity of H. egeriae was investigated over three consecutive generations in multi-generational impact trials. In a controlled environment of 22 ± 2°C, H. egeriae exhibited the ability to rapidly increase in population size within a short period of time, which will enhance agent establishment and build-up in the field. Host-specificity trials indicated that H. egeriae has a host range restricted to the Hydrocharitaceae, with exploratory feeding and development on Lagarosiphon major Ridley, L. muscoides Harvey and Vallisneria spiralis L. However, only L. major supported agent development during paired larval choice tests, and continuation trials showed that the test species was not physiologically capable of supporting viable agent populations. Risk analysis illustrated that the feeding and reproductive risks that H. egeriae pose to non-target species are very low and therefore, H. egeriae should be safe for release in South Africa. Additionally, significant damage to vital plant structures (shoot growth and side shoot length) was only recorded under high (five larvae) agent abundances. Encouragingly, the number of leaves mined at the end of the experiment was similar for both intermediate (three) and high (five) larval abundances, suggesting that cumulative leaf-mining under intermediate larval abundances has the potential to reduce the fitness of E. densa, given sufficient time. Results from pre-release assessments provide a robust understanding of the specialization of the potential biological control agent to its host plant. Nevertheless, the absolute success of a biological control programme depends on the many factors after prerelease assessments that determine agent establishment, persistence and target weed suppression, e.g. mass-rearing, release protocols and a/biotic factors within the recipient community. Considering these factors, the best mass-rearing and release protocols are proposed here and future research priorities are identified. Finally, the long term success for managing E. densa in South Africa will require a holistic approach to address the underlying factors, such as eutrophication and human-mediated distribution that drive submerged aquatic plant invasions.
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The relationship between OCT4 and an aggressive phenotype in triple negative breast cancer (TNBC)
- Authors: Jackson, Hayley Claire
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59209 , vital:27477
- Description: Expected release date-April 2019
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The response of microalgal biomass and community composition to the chemical and physical dynamics of two Eastern Cape estuaries
- Authors: Cotiyane, Phumlile L
- Date: 2017
- Subjects: Estuarine plants -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape , Phytoplankton -- South Africa -- Eastern Cape , Algal blooms -- South Africa -- Eastern Cape , Algal blooms -- Monitoring-- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/4999 , vital:20751
- Description: Water quality characteristics of estuaries are influenced by both natural and anthropogenic activities. Estuaries situated in coastal urban areas are exposed to more perturbations than those in rural settings. This study determined the drivers of phytoplankton biomass and community composition in two Eastern Cape estuaries and evaluated the anthropogenic activities that influence the overall health of each estuary. The estuaries were sampled in summer and winter (2014, 2015). The water quality of the estuaries was determined by measuring the variability in physico-chemical parameters (salinity, temperature, dissolved oxygen and pH), nutrients, phytoplankton biomass and composition and faecal bacteria. Results show that both Mngazana and Nahoon are well oxygenated (~ 6.0 mg l-¹) and are saline systems (~ 35 ppt) due to low freshwater inputs into both estuaries. Mngazana Estuary exhibited low nutrient inputs along the length of the estuary including Creeks 1 and 2 with low chlorophyll a (4.0 ± 0.2 µg Chl-a r¹) being recorded during this study while Nahoon Estuary had an overall chlorophyll a of 3.5 ± 0.3 µg Chl-a r¹. The two estuaries were dominated by flagellates with phytoplankton blooms recorded seasonally. Possible eutrophic conditions were evident along the upper reaches of Nahoon indicated by nutrient accumulation and by the presence of cyanobacteria. This also this reflected the possible anthropogenic nutrient inputs originating from the Nahoon catchment despite the low freshwater inflow. The presence of faecal bacteria counts along both estuaries indicates the need for further investigation into the source of faecal contamination. The use of nutrient analyses and phytoplankton composition during this study enabled a clear description of the water characteristics of the investigated estuaries. Furthermore, the need for the adherence to freshwater flow requirements of estuaries to limit the dominance of marine waters was clearly illustrated. Urban runoff due to impervious surfaces increases nutrient inputs into estuaries while rural use of estuarine waters introduces contaminants into the system; coupled with low freshwater inputs and eutrophic conditions, the deterioration of estuarine water quality over time demonstrates the need for effective monitoring of these systems.
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The role of protected areas in the conservation and management of fisheries in the Chobe District of Botswana
- Authors: Bakane, Modiegi
- Date: 2017
- Subjects: Cichlids Botswana Chobe District , Protected areas Botswana Chobe District , Fishery management Botswana Chobe District
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/7459 , vital:21262
- Description: This study was aimed at better understanding the function of protected areas as a management strategy for the Chobe District fishery in Botswana, by first investigating the relative abundance in fish communities in and outside protected areas and secondly, by performing an assessment of the biology of commercially important large cichlid species viz threespot tilapia Oreochromis andersonii, greenhead tilapia Oreochromis macrochir and redbreast tilapia Coptodon rendalli. In this study, data and specimens were collected during seasonal surveys between September 2014 and April 2015, using the standard graded fleets of gillnets employed in other programmes in the region, together with D-nets, angling and electro-fishing. The study demonstrated that fish communities in the floodplain ecosystems in the Chobe District of Botswana were representative of the region, containing some 70 species in 14 families. This study also demonstrated that for all the species collected, the mean Catch Per Unit Effort (CPUE) by weight for all the species was significantly higher in protected areas (Kruskal Wallis Test; P<0.05) namely, Zibadianja Lagoon (38 ± 31 kg/net.night"1 and Savuti River/marsh 25 ± 19 kg/net.night"1) than in the fished Chobe River floodplains CPUE (6 ± 3 kg/net.night-1). Biological contributions were estimates of longevity, growth and maturity for O. andersonii, O. macrochir and C. rendalli. Age and growth were estimated using sectioned sagittal otoliths. The Von Bertalanffy growth equation from otolith derived length at age was Lt(mm) =298 (1-e-0 59(t=- 098)) for O. andersonii and Lt(mm) = 337 (1-e-0'20(t=-235)) for C. rendalli. The results indicated that protected areas enhanced fish longevity, and fish in protected areas were larger and older than those in exploited areas. Maturity estimates for the large cichlids were consistent with other research in the region and the length-at-50% maturity was estimated as 250mm Lt for O. andersonii, 225 mm Lt for O. macrochir and 210 mm Lt for C. rendalli. Management recommendations are therefore to retain gill net mesh size regulations that ensure that these fish reach maturity and can breed before being harvested and to assess the possibility of increasing the number of protected areas in the district.
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The sedimentology and depositional model of VS5 reef at Beatrix mine and surrounding areas of the Freestate Goldfield, South Africa
- Authors: Shivambu, Steven
- Date: 2017
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/4942 , vital:20745
- Description: Historically, placers of economic importance at Sibanye Gold's Beatrix No. 3 Shaft were Beatrix Reef, Aandenk Reef and Composite of the two reefs. Recently, the VS5 placer has emerged to be a significant contributor of ore tonnages mined on the Shaft as mining advances into deeper levels towards the northern portion of the mine lease area. Gold concentration in the VS5 Reef is highly variable from uneconomic, through marginal to economic gold values. A good knowledge of the sedimentological framework of the VS5 Reef was considered necessary in order to interpret the variable distribution of the gold within the VS5 placer. The aim of this study was to determine the depositional environments that played a major role during the formation of the VS5 placer by means of investigating the macroscopic sedimentological parameters of this particular reef. These sedimentological parameters were used as the basis for the subdivision of VS5 Reef into different facies recognized in the mine and surrounding areas. It was recognized that the VS5 placer was formed in a distal, braided fluvial environment by the reworking of the pre-existing Aandenk Reef by new materials containing significant amount of nondurable materials (see definition on page xii) such as shale detritus. Where there is no evidence of reworking of the older Aandenk Reef, the VS5 Reef occurs as poorly sorted, polymictic conglomerate with abundance of non-durable detritus. This is referred to as the Immature (IV) VS5 facies and occurs in the northern portion of the study area. The degree of reworking of the gravel bars by waves and current action resulted in the formation of well sorted, oligomictic conglomerates of the Beatrix facies in the southern portion of the mine. At the boundaries between the Immature VS5 and Beatrix facies occurs the Transitional (Sub-mature) VS5 facies, characterized by reef comprising a polymictic upper portion and a basal more mature oligomictic unit. The Transitional VS5 facies extends across the current central northern mining faces of Beatrix No. 3 Shaft with a northwest-southeast trend. There is a strong correlation between the VS5 lithofacies and distribution of gold mineralization. The Immature VS5 facies is poorly mineralized, with gold values averaging 200 c.m.g/t and lower. The Transitional (Sub-mature) VS5 facies has elevated gold values, ranging from 300 c.m.g/t to 1500 cm.g/t. Mineralization in this unit tend to be bottom loaded as well as at the base of each cyclic unit. The Beatrix facies records the highest grades averaging >1500 cmg/t. The improved understanding of the VS5 lithofacies made it possible to predict gold mineralization and aid planning to mine into viable VS5 areas.
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The socio-economic contribution of non-timber forest product trade to households in four villages in Zomba and Machinga Districts, Malawi
- Authors: Mahonya, Sophie Manchichi
- Date: 2017
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/4787 , vital:20724
- Description: The principal aim of this study was to assess the socio-economic contribution of nontimber forest product (NTFP) trade to households in Zomba and Machinga, southern Malawi. Quantitative and qualitative data were collected through several methods, including a household survey using questionnaire interviews, focus group discussions, key informant interviews with individual traders, direct observations, and literature review. The quantitative data were analysed statistically using SPPS version 16.0 while the qualitative data were analysed thematically. NTFP trade was the third important source of cash income for 15% of the households, although the level of use, buying and selling of NTFPs varied across the four study villages. All households in all the study villages used firewood (100%), and most used thatch grass (94%), bamboo (96%), wood for building (92%), largely as construction materials. However, the percentage of households buying NTFPs was lower, with the maximum percentage of households being 50%. The percent of households engaged in selling at least one NTFP was lower still at 39%. Substantial cash incomes were generated from firewood and edible orchids sales which provided up to a maximum of Mk180,000, equivalent to US$456, per year. Households joined the trade mostly for an alternative source of cash income due to poverty and to meet basic needs when other options were not available or feasible. Cash income generated from NTFP trade acted as a safety net and a coping strategy when other avenues supporting livelihoods were not accessible. The socio-economic benefits derived from NTFP trade were associated with the quantities collected, sold, market forces influenced by the law of demand and supply. The small amounts of cash income generated by most households were important as they supplemented household cash needs. There was a strong association between NTFP trade as one of the important sources of cash income and the number of months a household had food from their own garden in a year. There was a significant relationship though weak between ranking of NTFP trade and livestock ownership by households. Value chain analysis was used as an analytical tool to understand the processes involved in NTFP trade. The value chains for the products under study were short, dominated by traders and some intermediaries. Most of the products were sold in local markets with little value addition. This study recommends that policy makers should integrate NTFPs into their development plans, emphasizing the establishment of management strategies that will enhance availability and sustainability of the resource. NTFPs contributed to the livelihoods of the households socially and economically through provision of food, cash income, energy for cooking, medicine and construction materials.
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The tectonic evolution of the Cape Fold Belt: constraints from fluid inclusion characteristics in syntectonic quartz veins
- Authors: Proctor, Briony
- Date: 2017
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/8019 , vital:21335
- Description: Syn-tectonic quartz veins formed along faults, folds and tension gashes in rocks of the Cape Supergroup (CSG) of the central Cape Fold Belt (CFB) comprise mainly hydrous saline fluids. These veins may also contain CO₂ Syn-tectonic quartz veins formed along faults, folds and tension gashes in rocks of the Cape Supergroup CO₂ , or CH4 and CO₂, or neither CO₂ nor CH4. The majority of inclusions are two-phase and fluid rich, and the most common fluid composition is H2O-NaCl. The final melting temperature, and therefore salinity, differs very little across different structures (fluids in all structures show maximum salinities between 2.5 and 6 wt% NaCl equivalent). Thrusts, reverse faults, strike- and oblique-slip faults, and folds all have similar homogenization temperatures (Th). Primary H2O-NaCl inclusions show Th between ~130 and 200 °C, and H2O-NaCl-CO₂ inclusions have slightly higher Th, between ~140 and 240 °C. Secondary inclusions in all structures have a similar Th range to primary inclusions, but have a lower maximum Th (~130-180 °C). Inclusions containing CH4 have the highest Th (~210 - 300 °C). Microthermobarometry indicates that fluids associated with contractional structures, such as thrust faults or folds, from the Ordovician lower Table Mountain Group (TMG) show lower greenschist facies trapping conditions (~170-175 MPa and ~240-300 °C). These veins also show a plastic deformation overprint (recrystallization of quartz and foam textures), at temperatures higher than the trapping conditions (~ ≥300 °C), indicating that temperatures increased subsequent to hydraulic fracturing, quartz precipitation and thrust slip. These structures formed on a prograde path, at approximately 335 Ma, at a time when the overlying CSG rock column was approximately 6800 m thick. This event pre-dated the thermal peak of the Cape Orogeny at ~276-261 Ma by ~60 million years. Further up in the stratigraphy of the CFB, in the Devonian upper Bokkeveld Group, fluid inclusions in quartz veins associated with a thrust fault show similar trapping pressure (~200 MPa) to the structures in the lower CFB. At 335 Ma, the stratigraphic overburden on this sample locality would not have been sufficiently thick to exert the calculated pressure. This fault may have formed at a later time. The observed pressure of ~200 MPa may have been created either by the higher Bokkeveld Group, the entire Witteberg Group, and further CSG rocks that were eroded prior to the deposition of the Permo-Triassic Karoo Supergroup, or by tectonic thickening of the CSG by prograde thrusting. Still further up in the CSG, fluids from a fold sample from the Witteberg Group record quartz precipitation at lower greenschist facies conditions and subsequent plastic deformation during folding. The formation of this fold postdates the thrusting in the lower TMG, and may correlate in time with deformation during the thermal peak in Middle Permian time (~276-261 Ma).
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Thermoluminescence of synthetic quartz annealed beyond its second phase inversion temperature
- Authors: Mthwesi, Zuko
- Date: 2017
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/46077 , vital:25577
- Description: Thermoluminescence of synthetic quartz annealed at 1000 ºC for 10 minutes has been studied. The aim was to study mechanisms of thermoluminescence in annealed synthetic quartz and to discuss the results in terms of the physics of point defects. The sample was irradiated with a beta dose of 10 Gy of beta radiation and then heated at a linear heating rate of 1 ºC.s-1 up to 500 ºC. The thermoluminescence (TL) glow curve consists of three glow peaks. Peak I at 74 0C (main peak) with high intensity as compared to the other two peaks. Peak II at 144 ºC is more intense than peak III at 180 ºC. This study was on the main peak (MP) at 74 ºC and peak III at 180 ºC. Kinetic analysis was carried out to determine the trap depth E, frequency factor s and the order of kinetics b of both peaks using the initial rise, peak shape, variable heating rate, glow curve deconvolution and isothermal TL methods. The values of kinetic parameters obtained were around 0.7 to 1.0 eV for trap depth and in the interval of 108 to 1015 s-¹ for frequency factor for both peaks. The effect of heating rate from 0.5 to 5 ºC.s-¹ on the TL peak intensity and peak temperature was observed. Also the effect of thermal quenching was observed at high heating rates. Since the TL glow curve has overlapping TL peaks, the Tm-Tstop method from 54 ºC up to 64 ºC and E -Tstop methods were introduced where a first order single peak was observed. Phototransfered thermoluminescence (PTTL) was investigated and characterized by three peaks. First PTTL peak I at 72 ºC, peak II at 134 ºC and peak III at 176 ºC. Analysis was carried out on peaks I and III for the effect of dose dependence from 20-200 Gy. Thermal fading was observed on PTTL peaks I and III, after storage time of 30 minutes.
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Towards standardised reef fish monitoring: an assessment of stereo-video techniques to sample shallow and deep reef fish assemblages
- Authors: Halse, Sarah Jane
- Date: 2017
- Subjects: Reef fishes -- South Africa -- Agulhas, Cape (Cape) , Reef fishes -- Ecology -- South Africa -- Agulhas, Cape (Cape) , Marine biodiversity -- South Africa -- Agulhas, Cape (Cape) , Biotic communities -- South Africa -- Agulhas, Cape (Cape) , Sparidae -- South Africa -- Agulhas, Cape (Cape) , Reef fishes -- Size -- South Africa -- Agulhas, Cape (Cape) , Underwater videography in wildlife monitoring -- South Africa -- Tsitsikamma , Baited remote underwater stereo-video systems (stereo-BRUVs)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/4635 , vital:20702
- Description: Baited remote underwater stereo-video systems (stereo-BRUVs) were developed to determine fish abundance and size structure in a more unbiased, and relatively non-invasive manner across a broader range of depths and habitats than conventional sampling methods achieve. These characteristics make stereo-BRUVs particularly useful for research inside marine protected areas (MPAs) where researchers are required to minimize disturbance to the protected environment. Although stereo-BRUVs have been widely used around the world, they are novel to South Africa and standardised protocols for their application are required. As such, this study aimed to address i) the effect of different bait types, namely pilchard (Sardinops sagax), squid (Loligo reynaudi) and bivalves (Crassostrea gigas and Perna perna) on the observed reef fish assemblage structure and ii) the effect of artificial illumination (lighting) on the observed reef fish assemblage structure sampled with stereo-BRUVs. One key component of the stereo-BRUVs methodology is the application of bait to attract fish into the field of view. Globally, pilchard is the most often used bait type for stereo- BRUVs, however, its suitability has never been tested comparatively against other bait types for South African conditions. Significant differences in fish abundance and assemblage structure were recorded between stereo-BRUVs deployments when applying the different bait types. The bivalve baits, oyster and mussel, were typically poor when sampling the reef fish assemblages of the region. Pilchard and squid were sampled in similar communities and were able to attract the majority of the reef fish from the region, suggesting they are suitable bait types for stereo-BRUVs in the Agulhas ecoregion. However, a power analysis indicated that roughly twice the amount of samples are required to effectively sample the same abundances of Chrysoblephus laticeps (roman) and Cheilodactylidae (fingerfins) species when sampling with squid as opposed to pilchard. Both bait types can be locally sourced, however, squid is considerably more expensive than pilchard. Considering the difference in cost, together with the fact that twice as much squid bait is required, squid is not a cost-effective option relative to pilchard. As such this study recommends that pilchard is the most appropriate bait for the Agulhas ecoregion of South Africa. Due to low light levels, artificial lighting is required when conducting remote video research in the sub-photic zone. Blue light has a shorter wavelength than other colour lights and attenuates slower through water. In addition, blue lighting has no recorded effect on fish behaviour and has proven to be a successful light colour for underwater sampling. The use of lighting is unavoidable for sub-photic stereo-BRUVs sampling and is recommended for all stereo-BRUVs sampling for comparability of data from environments characterised by different light levels. A study was conducted to test the necessity of artificial lighting when sampling from environments characterised by ambient light levels adequate for stereo- BRUVs sampling, a comparative to measure the effect of light on the fish assemblage structure. Of the more commonly detected fish species (those observed in >50% of the samples), most were seen at similar abundances in samples using lighting and in those without lighting. No significant differences were observed in fish length data between samples collected with and samples collected without lighting. This suggests that standardised stereo-BRUVs sampling across photic zones on the continental shelf of South Africa can be collected without blue lighting when ambient light levels are sufficient to see the survey area.
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Treatment of anaerobically digested brewery effluent in high rate algal ponds: an understanding of the microbial community structure in the ponds and the underlying mechanisms responsible for nutrient removal from the effluent
- Authors: Mogane, Mmathabo Lucretia
- Date: 2017
- Subjects: Brewing industry -- Waste disposal -- South Africa , Breweries -- Waste displosal -- South Africa , Algae culture -- South Africa , Water -- Purification -- South Africa , Sewage lagoons -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/5026 , vital:20754
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Understanding social-ecological changes in Fairbairn village, Eastern Cape
- Authors: Falayi, Menelisi
- Date: 2017
- Subjects: Fairbairn Village (Eastern Cape, South Africa) , Rural development -- South Africa -- Eastern Cape -- Fairbairn Village , Land tenure -- South Africa -- Eastern Cape -- Fairbairn Village
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/7408 , vital:21257
- Description: The world is becoming increasingly complex and uncertain due to increasing levels of social- ecological change. Rural communities in sub-Saharan Africa are faced with multiple interconnected challenges such as population growth, environmental change, economic recession and climatic changes, amongst others. Such challenges can play a key role in determining vulnerability and food security, particularly for natural resource product- dependent societies that have limited livelihood sources. Studies that consider understanding how society and ecosystems simultaneously interact and respond to new and exacerbated drivers are increasingly needed. Therefore, this study was conducted in Fairbairn village, Eastern Cape, South Africa with the purpose of exploring multi-scale historical processes and current related trends in livelihood and environmental change, and the implications for future trajectories under a changing climate. This study applied social-ecological thinking and several conceptual approaches were combined to provide a lens for exploring the changes taking place. These included, inter alia, complexity theory, social-ecological systems, the sustainable livelihoods approach and the Intergovernmental Platform on Biodiversity and Ecosystem Services framework and principles. The study employed a mixed method approach to gather data, which included a household survey, aerial photography, historical records as well as Participatory Learning and Action, focus group discussions, and Participatory Scenario techniques. Quantitative data were analysed using Excel and Statistica version 13, whilst coding was used for thematic analysis of qualitative data. The main objective of this study was to explore multi-scale historical processes and current related trends of livelihood and environmental change, and the implications of these for future trajectories under a changing climate. Livelihood and landscape changes in Fairbairn village are embedded within a history of direct state intervention and more recently, improvements in basic service delivery. The findings show that natural resource products still form an important part of people’s livelihoods despite many other changes over the last fifteen years. A high proportion of households continue to utilise different products to meet household needs. The most widely used products are fuelwood, wild herbs and wild fruits. More so, my results revealed a significant increase in the number of people commercialising natural resource products over the past fifteen years. Furthermore, I found that rural livelihoods in Fairbairn are heavily dependent on external income and consumption and have become increasingly divorced from local production patterns. My results depict a steady decline of cultivated fields with a corresponding increase of home gardens since the 1960s. Therefore, the results demonstrate that current livelihood strategies are an expression of historical processes interacting with current contextual complexities. Given the complex and multidimensional issues at play in Fairbairn, the study highlights that there is no straightforward answer regarding future livelihood strategies. However, participatory scenario deliberations revealed that the youth were much more open to diversified and even very different forms of livelihood strategies in the future, whilst community leaders and elders remained firmly attached to farming activities. Understanding the diversity of past livelihood changes, together with current trends, can help to better contextualise future livelihood trajectories and this can therefore help rural communities identify and avoid undesirable futures under a changing climate.
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A comparison of muscle fatigue responses between static and quasi-static exertions
- Authors: Nel, Conrad
- Date: 2016
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/3475 , vital:20502
- Description: Background: This study examined localized muscle fatigue responses from sub-maximal quasi-static work protocols and additionally how it compares to purely static work. The goal was to produce research that enhances the understanding of the demands on muscles during manual work to aid in preventing injuries stemming from localized muscle fatigue. Injury rates remain a problem in manual labour sectors, particularly for the lower back and shoulder regions for the manufacturing, service and construction sectors, and for knee and elbow flexors in the sports sector. Few studies have looked at quasi-static work and what the resulting fatigue characteristics are, especially when compared to purely static or purely dynamic work. This comparison is particularly important due to the fact that risk assessment tools that are currently utilized to assess risk in the working environment are based on fatigue studies that focus on purely static or purely dynamic work. This requires attention as many working situations are neither static nor dynamic, but rather quasi-static in nature, with aspects of both dynamic and static muscle components. The scope of this study only encompasses the comparison between purely static and quasi-static work. Objectives: This study had two objectives, firstly, to determine what the fatigue characteristics of quasi-static work are and how it compares to fully static work. Secondly, to determine whether an underlying static component within an otherwise dynamic muscle force affects localized muscle fatigue compared to quasi-static work that has equal amounts of effort but with no underlying static component. Methods: Four experimental conditions were tested, each on four muscles, namely the medial deltoid, bicep brachii, bicep femoris and erector spinae muscles. To test the two objectives of this study, 16 volunteers performed a five minute fatigue protocol, that either entailed a fully static condition which involved: 1) producing a steady force at 25 percent of maximum voluntary force, 2) a quasi-static condition with fully dynamic muscle force that alternates the required force level between zero and 50 percent of maximum force, 3) a quasi-static condition with an underlying static component of five percent of maximum force, or 4) a quasi-static condition with a large underlying static component of 15 percent of maximum force. All the experimental conditions in this study had the same average workload of 25 percent of maximum voluntary force over time and thus total workload. The dependant variables of interest were ratings of perceived exertion, changes in muscle fibre recruitment (% of maximum EMG activity), maximum force and center frequency from a spectral analysis of the surface electromyography. These were measured throughout the protocols at one minute intervals to determine how muscle fatigue progressed, and how the fatigue responses differed between conditions. Results: The data from comparing fully static and quasi-static work showed that of the variables measured, the rating of perceived exertion (RPE) and maximum force data indicated that for bicep brachii and bicep femoris muscles, fully static work is more fatiguing than work that alternates between zero and 50 percent of maximum force. The results for the medial deltoid and erector spinae muscles were inconclusive. The findings regarding the comparison between quasi-static conditions with and without an underlying static component revealed that an underlying static component results in greater fatigue when compared to a quasi-static condition with no static component. The results may also suggest that a larger static component coupled with a smaller peak force results in less fatigue than a condition with a small underlying static component coupled with a higher peak force in some scenarios, provided total work is kept constant. All conditions had to have the same workload in order to be validly compared and thus the condition with a larger underlying static component had a lower peak force compared to the condition with no underlying static component or the condition with a small underlying static component. Conclusions: This study presented evidence that quasi-static work does not induce fatigue when measured by RPE and drop in maximum force in the same way as static work. Additionally, the results indicate that a larger underlying static component does not necessarily fatigue a muscle faster if the overall workload is kept constant. However, the results do suggest that any underlying static component will increase the demand on a muscle when compared to a muscle exertion with no static component. When considering the available literature on how muscles fatigue during low level static contractions, the current understanding is that the larger the force during a static contraction, the faster the onset of fatigue and decrements in performance occur. The results of this study suggest that this same relationship cannot be applied to quasi-static work where an underlying static component is part of an otherwise dynamic muscle force. Thus total workload or peak force may play a larger role than the static muscle exertion in some scenarios.
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A longitudinal study of DNS traffic: understanding current DNS practice and abuse
- Authors: Van Zyl, Ignus
- Date: 2016
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/3707 , vital:20537
- Description: This thesis examines a dataset spanning 21 months, containing 3,5 billion DNS packets. Traffic on TCP and UDP port 53, was captured on a production /24 IP block. The purpose of this thesis is twofold. The first is to create an understanding of current practice and behavior within the DNS infrastructure, the second to explore current threats faced by the DNS and the various systems that implement it. This is achieved by drawing on analysis and observations from the captured data. Aspects of the operation of DNS on the greater Internet are considered in this research with reference to the observed trends in the dataset, A thorough analysis of current DNS TTL implementation is made with respect to all response traffic, as well as sections looking at observed DNS TTL values for ,za domain replies and NX DOMAIN flagged replies. This thesis found that TTL values implemented are much lower than has been recommended in previous years, and that the TTL decrease is prevalent in most, but not all EE TTL implementation. With respect to the nature of DNS operations, this thesis also concerns itself with an analysis of the geoloeation of authoritative servers for local (,za) domains, and offers further observations towards the latency generated by the choice of authoritative server location for a given ,za domain. It was found that the majority of ,za domain authoritative servers are international, which results in latency generation that is multiple times greater than observed latencies for local authoritative servers. Further analysis is done with respect to NX DOM AIN behavior captured across the dataset. These findings outlined the cost of DNS miseonfiguration as well as highlighting instances of NXDOMAIN generation through malicious practice. With respect to DNS abuses, original research with respect to long-term scanning generated as a result of amplification attack activity on the greater Internet is presented. Many instances of amplification domain scans were captured during the packet capture, and an attempt is made to correlate that activity temporally with known amplification attack reports. The final area that this thesis deals with is the relatively new field of Bitflipping and Bitsquatting, delivering results on bitflip detection and evaluation over the course of the entire dataset. The detection methodology is outlined, and the final results are compared to findings given in recent bitflip literature.
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Active Layer Dynamics at Four Borehole Sites in Western Dronning Maud Land, Antarctica
- Authors: Kotzé, Camilla
- Date: 2016
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4894 , http://hdl.handle.net/10962/d1021295
- Description: Permafrost and active layer dynamics in the Antarctic play an important role within terrestrial landscapes and ecosystems and as a climate change indicator. However, they remain less thoroughly researched than their Northern-Hemispheric counterpart. Despite advancements made by ANTPAS on the permafrost and active layer monitoring network in the Antarctic, observational gaps still exist. Western Dronning Maud Land (WDML) has been identified as one of these gaps, necessitating further research on permafrost dynamics and the influence of climate parameters thereon. Such elucidation is critical to both the cryospheric and life sciences. Variations in the surface climate of Antarctica can be seen as a result of inter-annual variations in atmospheric circulation, enhancing permafrost degradation and active layer thickening which directly affects soil processes, such as sorting and cryoturbation. Ground temperatures from four permafrost boreholes from WDML were analysed from 2007 to 2014. The study sites exhibit seasonal freezing, periglacial landforms, and altitudinal variation, ranging between ca. 450masl to ca. 1300masl. Using ground thermal regime and regional climate data, the spatial and temporal variability of the active layer in the Ahlmannryggen and Jutulsessen areas of WDML were characterised. 137 Cs tracing has revealed that the active layer and associated landforms have been active over the past half century. Further results show that active layer depths at each site vary inter-annually and are particularly influenced by snow cover, altitude and distance to the ice-shelf. Moreover, a correlation between the SAO (Semi-Annual Oscillation) and measured ground temperatures was found, principally during the transitional season of the SAO in May and September. The relationship between climate and ground thermal regimes, especially the influence of teleconnections thereon, is essential to improving the understanding of permafrost dynamics and landform morphology in continental Antarctica.
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An assessment of the efficiency and effectiveness of the Working for Water NBAL mapping, contract teams and clearing of Acacia mearnsii
- Authors: Modipa, Rebone Dineo
- Date: 2016
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/3192 , vital:20383
- Description: Working for Water (WfW) works to fulfil their dual mandate of protecting ecosystem services and creating employment opportunities for poor communities. There have been many successes but evidence is increasing regarding the inefficiencies at project and site scales. The study was undertaken in the Eastern Cape, South Africa, at a farm called Ann’s Villa situated in the Kommadagga valley, at the foot of the northern side of the Zuurberg pass. The study sought to assess the efficiency of the WfW mapping of natural biological aliens (NBAL), of contract teams and the effectiveness of the clearing methods employed to clear Acacia mearnsii. To achieve this, WfW mapping was analysed, contract team dynamics of the different task groups were observed and assessed and various Acacia mearnsii and indigenous plant variables were measured pre-and post-clearing of A. mearnsii. The first key finding was that overall the WfW NBAL mapping was inaccurate, with WfW A. mearnsii percentage cover (cover) estimations significantly over-estimated. Acacia mearnsii cover over-estimations resulted in fruitless expenditure as contracts were more expensive than necessary. Cover under-estimations also led to the inability to fulfill contractual obligations and the subsequent halting of the clearing of a large portion the study area. It was recommended that the NBAL mapping as well as the cover estimations of NBALs be conducted more rigorously, with expert assistance where skills are lacking, to avoid the associated fruitless expenditure. The second key finding was that WfW contract teams were largely inefficient, as a result of waiting, stemming from the lack of continuity in work. There was a strong positive relationship between subgroup chainsaw operator (CO) to stacker ratio and subgroup CO to stacker efficiency ratio. These inefficiencies meant that a mean of 58±67% of the total money spent per team resulted in fruitless expenditure. It was recommend that contract teams be organised to promote the continuity of work and that the current high stacker to CO ratios be reversed to increase efficiency and reduce fruitless expenditures. The third key finding was that overall the WfW methods of clearing A. mearnsii were 95% effective with a 90% removal success. The last key finding was that initial clearing operations had a largely insignificant impact on indigenous plant biodiversity. It was recommended that post-clearing inspection of quality control is conducted more rigorously and that penalties be implemented to deter contract teams from cutting indigenous species.
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