The hydrogeomorphology of the Featherstone Kloof Catchment
- Authors: Ntakumba, Stanley Sixolile
- Date: 2013-05-29
- Subjects: Wetlands -- South Africa , Wetland restoration -- South Africa -- Featherstone Kloof Catchment , Wetland conservation -- South Africa -- Featherstone Kloof Catchment , Wetland management -- South Africa -- Featherstone Kloof Catchment , Wetland ecology -- South Africa -- Featherstone Kloof Catchment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4870 , http://hdl.handle.net/10962/d1007862 , Wetlands -- South Africa , Wetland restoration -- South Africa -- Featherstone Kloof Catchment , Wetland conservation -- South Africa -- Featherstone Kloof Catchment , Wetland management -- South Africa -- Featherstone Kloof Catchment , Wetland ecology -- South Africa -- Featherstone Kloof Catchment
- Description: Wetlands are an important part of the landscape as hydrogeomorphological ecosystems. Over the centuries their importance has not received relevant attention; instead they have been treated as wastelands impeding development for maximum economic benefits. Research evidence from different parts of the world has influenced the change of such negative perceptions to an extent that the issue of wetlands' rehabilitation/restoration, conservation and management is firmly on the global agenda and local agendas of various countries, as evidenced by the adoption of the Ramsar Convention in 1971, and the Working for Water and Working for Wetlands programmes of the South African government. The aim of this research was to investigate the hydrological and geomorphological functions of a headwater wetland located in the Featherstone Kloof Catchment near Grahamstown, South Africa. The research was based on the hypotheses that wetlands store sediments, attenuate floods, store water and prolong downstream flows. A literature survey was conducted to gauge the state of knowledge about wetlands, particularly their hydrogeomorphology. An attempt was made to locate the study area within the broad historical and spatial context using a number of methods, including the radiocarbon dating of wetland sediments, the review of relevant literature and the analysis of historical hydroclimatic data. The results revealed that the wetland has existed for approximately 2000 years - as the oldest radiocarbon date obtained was 1850±50 BP. An analysis of more than a century (+120 years) long Grahamstown rainfall series indicated a steady fluctuation of rainfall around the mean, with regular decada1 cycles of wet and dry spells. Years with more rain below average were more common than those with higher rainfall, and storms events were quite common in the III area over the period. The distribution of seasons in the area over a calendar year period was demonstrated through the use of evaporation data. An intensive monitoring of hydrological and geomorphological variables was carried out using a combination of methods. The topography of the instrumented site was determined using a Total Station from reference benchmarks. Hydrological measurements included a nest of forty-eight piezometers for water table monitoring, and streamflow gauges at the upstream and downstream limits of the study site. Soil stratigraphic analysis was carried out through field techniques and laboratory measurements. A survey of wetland sediments was carried out after the main floods events. Data generated were used to analyse relationships between various variables and their role on the functioning of the wetland. The water balance of the wetland was quantified. The results indicated that the wetland was able to perform the cited hydrogeomorphological functions to some extent. For example, one of the key findings of this research is that the wetland was important in sustaining base flows under normal circumstances. However, the wetland did little to attenuate large floods. The results also revealed some important questions that require further research, including the role played by extreme flood events in altering wetland characteristics, the contribution of each water balance component in the hydrological functioning of wetlands, and importance of quantifying sediment budgets of headwater wetlands. The study demonstrated the complex nature of the wetland hydro geomorphology and that certain questions about wetlands require direct field monitoring to be better understood. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Authors: Ntakumba, Stanley Sixolile
- Date: 2013-05-29
- Subjects: Wetlands -- South Africa , Wetland restoration -- South Africa -- Featherstone Kloof Catchment , Wetland conservation -- South Africa -- Featherstone Kloof Catchment , Wetland management -- South Africa -- Featherstone Kloof Catchment , Wetland ecology -- South Africa -- Featherstone Kloof Catchment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4870 , http://hdl.handle.net/10962/d1007862 , Wetlands -- South Africa , Wetland restoration -- South Africa -- Featherstone Kloof Catchment , Wetland conservation -- South Africa -- Featherstone Kloof Catchment , Wetland management -- South Africa -- Featherstone Kloof Catchment , Wetland ecology -- South Africa -- Featherstone Kloof Catchment
- Description: Wetlands are an important part of the landscape as hydrogeomorphological ecosystems. Over the centuries their importance has not received relevant attention; instead they have been treated as wastelands impeding development for maximum economic benefits. Research evidence from different parts of the world has influenced the change of such negative perceptions to an extent that the issue of wetlands' rehabilitation/restoration, conservation and management is firmly on the global agenda and local agendas of various countries, as evidenced by the adoption of the Ramsar Convention in 1971, and the Working for Water and Working for Wetlands programmes of the South African government. The aim of this research was to investigate the hydrological and geomorphological functions of a headwater wetland located in the Featherstone Kloof Catchment near Grahamstown, South Africa. The research was based on the hypotheses that wetlands store sediments, attenuate floods, store water and prolong downstream flows. A literature survey was conducted to gauge the state of knowledge about wetlands, particularly their hydrogeomorphology. An attempt was made to locate the study area within the broad historical and spatial context using a number of methods, including the radiocarbon dating of wetland sediments, the review of relevant literature and the analysis of historical hydroclimatic data. The results revealed that the wetland has existed for approximately 2000 years - as the oldest radiocarbon date obtained was 1850±50 BP. An analysis of more than a century (+120 years) long Grahamstown rainfall series indicated a steady fluctuation of rainfall around the mean, with regular decada1 cycles of wet and dry spells. Years with more rain below average were more common than those with higher rainfall, and storms events were quite common in the III area over the period. The distribution of seasons in the area over a calendar year period was demonstrated through the use of evaporation data. An intensive monitoring of hydrological and geomorphological variables was carried out using a combination of methods. The topography of the instrumented site was determined using a Total Station from reference benchmarks. Hydrological measurements included a nest of forty-eight piezometers for water table monitoring, and streamflow gauges at the upstream and downstream limits of the study site. Soil stratigraphic analysis was carried out through field techniques and laboratory measurements. A survey of wetland sediments was carried out after the main floods events. Data generated were used to analyse relationships between various variables and their role on the functioning of the wetland. The water balance of the wetland was quantified. The results indicated that the wetland was able to perform the cited hydrogeomorphological functions to some extent. For example, one of the key findings of this research is that the wetland was important in sustaining base flows under normal circumstances. However, the wetland did little to attenuate large floods. The results also revealed some important questions that require further research, including the role played by extreme flood events in altering wetland characteristics, the contribution of each water balance component in the hydrological functioning of wetlands, and importance of quantifying sediment budgets of headwater wetlands. The study demonstrated the complex nature of the wetland hydro geomorphology and that certain questions about wetlands require direct field monitoring to be better understood. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
Synthesis and evaluation of PGM-selective ligands
- Gxoyiya, Babalwa Siliziwe Blossom
- Authors: Gxoyiya, Babalwa Siliziwe Blossom
- Date: 2013-05-28
- Subjects: Platinum group , Ligands , Ligands -- Evaluation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4450 , http://hdl.handle.net/10962/d1007849 , Platinum group , Ligands , Ligands -- Evaluation
- Description: A series of polydentate POM-selective, sulfur-containing amide ligands have been synthesized from ro-dibromoalkanes and mercaptoacetanilide, The resulting 3,6- dithiaoctanediamides and 3,7-dithianonanediamides, some of which contain a polymerisable group, were all characterized by high-resolution MS, IR, I Hand I3C NMR spectroscopic methods. Various approaches to the polymerisable ligands were explored, the most efficient proving to be the incorporation of an allyl ether moiety in the mercaptoacetanilide. The corresponding Pd(U) and Pt(II) complexes were also prepared from the metal chloride salts and characterized by elemental analysis and spectroscopic methods. The NMR data indicates that both the cis- and transcomplexes were formed, while the IR data indicates cis- coordination of the chlorine . ligands. Molecularly imprinted polymers (MIP's), prepared using platinum(II) mercaptoacetanilide and 3,6-dithiadiamide complexes, showed high selectivity for , , palladium(II) [in the presence of Pt(II), CoCII), Cu(II) and Ni(II)] as determined by . ICP-MS analysis. The more kinetically inert Pt(II) ions however, slowly displaced Pd(II), confirming the Pt(II) selectivity of the MIP's. Solvent extraction studies were conducted to explore the selectivity of the 3,6- dithiaoctanediamides and 3,7-dithianonanediamides for Pd(U) over CoCII), Cu(U) and Ni(II). The ICP-MS data indicate that, in general, equilibration was achieved within ten minutes and that the longer-chain amides were less selective than the shorter-chain analogues. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Authors: Gxoyiya, Babalwa Siliziwe Blossom
- Date: 2013-05-28
- Subjects: Platinum group , Ligands , Ligands -- Evaluation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4450 , http://hdl.handle.net/10962/d1007849 , Platinum group , Ligands , Ligands -- Evaluation
- Description: A series of polydentate POM-selective, sulfur-containing amide ligands have been synthesized from ro-dibromoalkanes and mercaptoacetanilide, The resulting 3,6- dithiaoctanediamides and 3,7-dithianonanediamides, some of which contain a polymerisable group, were all characterized by high-resolution MS, IR, I Hand I3C NMR spectroscopic methods. Various approaches to the polymerisable ligands were explored, the most efficient proving to be the incorporation of an allyl ether moiety in the mercaptoacetanilide. The corresponding Pd(U) and Pt(II) complexes were also prepared from the metal chloride salts and characterized by elemental analysis and spectroscopic methods. The NMR data indicates that both the cis- and transcomplexes were formed, while the IR data indicates cis- coordination of the chlorine . ligands. Molecularly imprinted polymers (MIP's), prepared using platinum(II) mercaptoacetanilide and 3,6-dithiadiamide complexes, showed high selectivity for , , palladium(II) [in the presence of Pt(II), CoCII), Cu(II) and Ni(II)] as determined by . ICP-MS analysis. The more kinetically inert Pt(II) ions however, slowly displaced Pd(II), confirming the Pt(II) selectivity of the MIP's. Solvent extraction studies were conducted to explore the selectivity of the 3,6- dithiaoctanediamides and 3,7-dithianonanediamides for Pd(U) over CoCII), Cu(U) and Ni(II). The ICP-MS data indicate that, in general, equilibration was achieved within ten minutes and that the longer-chain amides were less selective than the shorter-chain analogues. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
A comparative study of the Linux and windows device driver architecture with a focus on IEEE1394 (high speed serial bus) drivers
- Authors: Tsegaye, Melekam Asrat
- Date: 2004
- Subjects: Microsoft Windows (Computer file) , Linux , Operating systems (Computers) , DOS device drivers (Computer programs) , Linux device drivers (Computer programs)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4591 , http://hdl.handle.net/10962/d1004829 , Microsoft Windows (Computer file) , Linux , Operating systems (Computers) , DOS device drivers (Computer programs) , Linux device drivers (Computer programs)
- Description: New hardware devices are continually being released to the public by hardware manufactures around the world. For these new devices to be usable under a PC operating system, device drivers that extend the functionality of the target operating system have to be constructed. This work examines and compares the device driver architectures currently in use by two of the most widely used operating systems, Microsoft’s Windows and Linux. The IEEE1394 (high speed serial bus) device driver stacks on each operating system are examined and compared as an example of a major device driver stack implementation, including driver requirements for the upcoming IEEE1394.1 bridging standard.
- Full Text:
- Authors: Tsegaye, Melekam Asrat
- Date: 2004
- Subjects: Microsoft Windows (Computer file) , Linux , Operating systems (Computers) , DOS device drivers (Computer programs) , Linux device drivers (Computer programs)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4591 , http://hdl.handle.net/10962/d1004829 , Microsoft Windows (Computer file) , Linux , Operating systems (Computers) , DOS device drivers (Computer programs) , Linux device drivers (Computer programs)
- Description: New hardware devices are continually being released to the public by hardware manufactures around the world. For these new devices to be usable under a PC operating system, device drivers that extend the functionality of the target operating system have to be constructed. This work examines and compares the device driver architectures currently in use by two of the most widely used operating systems, Microsoft’s Windows and Linux. The IEEE1394 (high speed serial bus) device driver stacks on each operating system are examined and compared as an example of a major device driver stack implementation, including driver requirements for the upcoming IEEE1394.1 bridging standard.
- Full Text:
A comparison of web-based technologies to serve images from an Oracle9i database
- Authors: Swales, Dylan
- Date: 2004 , 2013-06-18
- Subjects: Active server pages , Microsoft .NET , JavaServer pages , Oracle (Computer file) , Internet searching , Web site development--Computer programs , World Wide Web , Online information services
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4583 , http://hdl.handle.net/10962/d1004380 , Active server pages , Microsoft .NET , JavaServer pages , Oracle (Computer file) , Internet searching , Web site development--Computer programs , World Wide Web , Online information services
- Description: The nature of Internet and Intranet Web applications has changed from a static content-distribution medium into an interactive, dynamic medium, often used to serve multimedia from back-end object-relational databases to Web-enabled clients. Consequently, developers need to make an informed technological choice for developing software that supports a Web-based application for distributing multimedia over networks. This decision is based on several factors. Among the factors are ease of programming, richness of features, scalability, and performance. The research focuses on these key factors when distributing images from an Oracle9i database using Java Servlets, JSP, ASP, and ASP.NET as the server-side development technologies. Prototype applications are developed and tested within each technology: one for single image serving and the other for multiple image serving. A matrix of recommendations is provided to distinguish which technology, or combination of technologies, provides the best performance and development platform for image serving within the studied envirorunent. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Authors: Swales, Dylan
- Date: 2004 , 2013-06-18
- Subjects: Active server pages , Microsoft .NET , JavaServer pages , Oracle (Computer file) , Internet searching , Web site development--Computer programs , World Wide Web , Online information services
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4583 , http://hdl.handle.net/10962/d1004380 , Active server pages , Microsoft .NET , JavaServer pages , Oracle (Computer file) , Internet searching , Web site development--Computer programs , World Wide Web , Online information services
- Description: The nature of Internet and Intranet Web applications has changed from a static content-distribution medium into an interactive, dynamic medium, often used to serve multimedia from back-end object-relational databases to Web-enabled clients. Consequently, developers need to make an informed technological choice for developing software that supports a Web-based application for distributing multimedia over networks. This decision is based on several factors. Among the factors are ease of programming, richness of features, scalability, and performance. The research focuses on these key factors when distributing images from an Oracle9i database using Java Servlets, JSP, ASP, and ASP.NET as the server-side development technologies. Prototype applications are developed and tested within each technology: one for single image serving and the other for multiple image serving. A matrix of recommendations is provided to distinguish which technology, or combination of technologies, provides the best performance and development platform for image serving within the studied envirorunent. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
A contribution to cabbage pest management by subsistence and small-scale farmers in the Eastern Cape, South Africa
- Authors: Mkize, Nolwazi
- Date: 2004
- Subjects: Cabbage -- Diseases and pests , Insect pests -- Integrated control -- South Africa -- Eastern Cape , Farms, Small -- South Africa -- Eastern Cape , Agriculture -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5659 , http://hdl.handle.net/10962/d1005342 , Cabbage -- Diseases and pests , Insect pests -- Integrated control -- South Africa -- Eastern Cape , Farms, Small -- South Africa -- Eastern Cape , Agriculture -- South Africa -- Eastern Cape
- Description: The interaction between farmers, agricultural scientists and extension workers is sometimes overlooked in agricultural entomology. In an attempt to respond to this reality this study examines some foundation of this interaction in relation to the pest management practices of subsistence and small-scale farmers and also highlights the problems that might arise in the implementation of IPM. Problems involving pests occurrence; language barriers; beliefs, knowledge and perception about insects, and visual literacy are examined. The thesis has a two-fold focus, firstly the study of pests on cabbages of subsistence farmers in Grahamstown and secondly a broader focus on other aspects such as cultural entomology, perception of insects and visual literacy specifically in relation to Xhosa speaking people in the Eastern Cape. The most important crop for emergent farmers in the Eastern Cape are cabbages, which have a variety of pests of which diamondback moths and are the most important. Traditional pest management practices tend to influence the development of IPM programmes adopted by these farmers. Eastern Cape farmers apply periodic cropping systems, which had an effect on the population densities of diamondback moth (DBM), other lepidopteran pests and their parasitoids. Considering the maximum population densities of DBM, which were 0.2 - 2.9 larvae/plant, there were no major pest problems. The availability of parasitoids, even in highly disturbed and patchy environments, showed good potential for biological control. Since some extension officers cannot speak the local farmers’ language, a dictionary of insect names was formulated in their language (isiXhosa) to assist communication. Response-frequency distribution analysis showed that the dictionary is essentially complete. The literal translations of some names show that isiXhosa speakers often relate insects to people, or to their habitat or classify them according to their behaviour. Farmers from eight sites in the Eastern Cape were interviewed regarding their knowledge and perception of insect pests and their control thereof. To some extent, farmers still rely on cultural control and have beliefs about insects that reflected both reality and superstition. There is no difference between the Ciskei and Transkei regions regarding insect-related beliefs. Farmers generally lack an understanding of insect ecology. There is a need for farmers to be taught about insects to assist with the implementation of IPM. Leftover pesticides from commercial farms or detergents are sometimes used to manage the pests. When training illiterate or semi-literate farmers, it is important to understand their media literacy so as to design useful graphic and object training media. Generally farmers showed that they either understand graphic or object media depending on the features of the insects being looked at. These findings are discussed with regard to the potential development of IPM training material for subsistence and small-scale farmers in a community.
- Full Text:
- Authors: Mkize, Nolwazi
- Date: 2004
- Subjects: Cabbage -- Diseases and pests , Insect pests -- Integrated control -- South Africa -- Eastern Cape , Farms, Small -- South Africa -- Eastern Cape , Agriculture -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5659 , http://hdl.handle.net/10962/d1005342 , Cabbage -- Diseases and pests , Insect pests -- Integrated control -- South Africa -- Eastern Cape , Farms, Small -- South Africa -- Eastern Cape , Agriculture -- South Africa -- Eastern Cape
- Description: The interaction between farmers, agricultural scientists and extension workers is sometimes overlooked in agricultural entomology. In an attempt to respond to this reality this study examines some foundation of this interaction in relation to the pest management practices of subsistence and small-scale farmers and also highlights the problems that might arise in the implementation of IPM. Problems involving pests occurrence; language barriers; beliefs, knowledge and perception about insects, and visual literacy are examined. The thesis has a two-fold focus, firstly the study of pests on cabbages of subsistence farmers in Grahamstown and secondly a broader focus on other aspects such as cultural entomology, perception of insects and visual literacy specifically in relation to Xhosa speaking people in the Eastern Cape. The most important crop for emergent farmers in the Eastern Cape are cabbages, which have a variety of pests of which diamondback moths and are the most important. Traditional pest management practices tend to influence the development of IPM programmes adopted by these farmers. Eastern Cape farmers apply periodic cropping systems, which had an effect on the population densities of diamondback moth (DBM), other lepidopteran pests and their parasitoids. Considering the maximum population densities of DBM, which were 0.2 - 2.9 larvae/plant, there were no major pest problems. The availability of parasitoids, even in highly disturbed and patchy environments, showed good potential for biological control. Since some extension officers cannot speak the local farmers’ language, a dictionary of insect names was formulated in their language (isiXhosa) to assist communication. Response-frequency distribution analysis showed that the dictionary is essentially complete. The literal translations of some names show that isiXhosa speakers often relate insects to people, or to their habitat or classify them according to their behaviour. Farmers from eight sites in the Eastern Cape were interviewed regarding their knowledge and perception of insect pests and their control thereof. To some extent, farmers still rely on cultural control and have beliefs about insects that reflected both reality and superstition. There is no difference between the Ciskei and Transkei regions regarding insect-related beliefs. Farmers generally lack an understanding of insect ecology. There is a need for farmers to be taught about insects to assist with the implementation of IPM. Leftover pesticides from commercial farms or detergents are sometimes used to manage the pests. When training illiterate or semi-literate farmers, it is important to understand their media literacy so as to design useful graphic and object training media. Generally farmers showed that they either understand graphic or object media depending on the features of the insects being looked at. These findings are discussed with regard to the potential development of IPM training material for subsistence and small-scale farmers in a community.
- Full Text:
A geological evaluation of marine diamond placer deposits on the central Namibian inner shelf : a case study of the Hottentot Bay area
- Authors: Rau, Grant
- Date: 2004 , 2013-06-03
- Subjects: Diamond mines and mining -- Namibia , Ocean mining -- Namibia , Marine mineral resources
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5038 , http://hdl.handle.net/10962/d1007554 , Diamond mines and mining -- Namibia , Ocean mining -- Namibia , Marine mineral resources
- Description: This study focusses on the marine diamond placers within Exclusive Prospecting Licence 1950 and Mining Licence 103a, located northwest of the north-facing Hottentot Bay which is 60 km north of Lüderitz, along the central Namibian coastline. The thesis follows the natural geological evolution of the marine placer deposit from primary source, through alluvial and/or glacial transportation, concentration along the coastline by wave, aeolian and alluvial/sheet-wash processes and finally marine diamond placer preservation. All of these processes are reviewed as they are important in understanding of the evolution marine placer deposits. The poly-cyclic role of coastal aeolian, alluvial, and marine processes, in marine placer enrichment is shown to be particularly important in considered target identification and prioritisation. A detailed bathymetric, sonographic and seismic interpretation, is an integral part of diamond placer exploration, and was used to examine and describe surficial and sub-bottom characteristics within the study area. Marine placers are formed along palaeo-strandlines during periods of marine transgression and regression and are therefore fundamental in marine placer exploration. A detailed bathymetry map, compiled for this study, of the area between Lüderitz Bay and Clara Hill, provides the foundation for a detailed terrace level investigation. Regionally, twelve well-developed stillstand levels are identified, nine of which fall into the study area. These interpretations are compared with global eustatic as well as terrace and resource/reserve levels in the Lüderitz area and are found to correlate well. Sediment dynamic studies involve the use of accredited application software for wave refraction modelling, to determine the wave angle and orbital wave velocity at the seabed. Bedload velocities, required to move diamonds of specific sizes, can be empirically determined and therefore areas of diamond entrainment and deposition can be modelled and target features delineated and prioritised. These detailed interpretations provide a sound platform for evaluating diamond placer process models in the study area. By integrating both previously published and newly formulated ideas, a revised, holistic model for the formation of marine diamond placer deposits in central Namibian is postulated. The proposed model is tested by comparing it to the lateral distribution of presently defined resource/reserve areas in the Lüderitz area and shows a close correlation with most of these enriched deposits. Based on this model, a matrix for the delineation and prioritisation of marine placer deposits is developed and the best target features within the study area are identified. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Authors: Rau, Grant
- Date: 2004 , 2013-06-03
- Subjects: Diamond mines and mining -- Namibia , Ocean mining -- Namibia , Marine mineral resources
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5038 , http://hdl.handle.net/10962/d1007554 , Diamond mines and mining -- Namibia , Ocean mining -- Namibia , Marine mineral resources
- Description: This study focusses on the marine diamond placers within Exclusive Prospecting Licence 1950 and Mining Licence 103a, located northwest of the north-facing Hottentot Bay which is 60 km north of Lüderitz, along the central Namibian coastline. The thesis follows the natural geological evolution of the marine placer deposit from primary source, through alluvial and/or glacial transportation, concentration along the coastline by wave, aeolian and alluvial/sheet-wash processes and finally marine diamond placer preservation. All of these processes are reviewed as they are important in understanding of the evolution marine placer deposits. The poly-cyclic role of coastal aeolian, alluvial, and marine processes, in marine placer enrichment is shown to be particularly important in considered target identification and prioritisation. A detailed bathymetric, sonographic and seismic interpretation, is an integral part of diamond placer exploration, and was used to examine and describe surficial and sub-bottom characteristics within the study area. Marine placers are formed along palaeo-strandlines during periods of marine transgression and regression and are therefore fundamental in marine placer exploration. A detailed bathymetry map, compiled for this study, of the area between Lüderitz Bay and Clara Hill, provides the foundation for a detailed terrace level investigation. Regionally, twelve well-developed stillstand levels are identified, nine of which fall into the study area. These interpretations are compared with global eustatic as well as terrace and resource/reserve levels in the Lüderitz area and are found to correlate well. Sediment dynamic studies involve the use of accredited application software for wave refraction modelling, to determine the wave angle and orbital wave velocity at the seabed. Bedload velocities, required to move diamonds of specific sizes, can be empirically determined and therefore areas of diamond entrainment and deposition can be modelled and target features delineated and prioritised. These detailed interpretations provide a sound platform for evaluating diamond placer process models in the study area. By integrating both previously published and newly formulated ideas, a revised, holistic model for the formation of marine diamond placer deposits in central Namibian is postulated. The proposed model is tested by comparing it to the lateral distribution of presently defined resource/reserve areas in the Lüderitz area and shows a close correlation with most of these enriched deposits. Based on this model, a matrix for the delineation and prioritisation of marine placer deposits is developed and the best target features within the study area are identified. , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
Age, growth and yield-per-recruit analysis of ndunduma Diplotaxodon limnothrissa (Teleostei: Cichlidae), in the southeastern arm of Lake Malawi
- Authors: Kanyerere, Geoffrey Zantute
- Date: 2004
- Subjects: Fishes -- Nyasa, Lake , Cichlids -- Nyasa, Lake , Fishes -- Growth -- Nyasa, Lake , Fishes -- Age -- Nyasa, Lake , Fishery resources -- Malawi , Fishery management -- Malawi
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5214 , http://hdl.handle.net/10962/d1005057 , Fishes -- Nyasa, Lake , Cichlids -- Nyasa, Lake , Fishes -- Growth -- Nyasa, Lake , Fishes -- Age -- Nyasa, Lake , Fishery resources -- Malawi , Fishery management -- Malawi
- Description: Diplotaxodon limnothrissa Turner (1995) is a widely distributed species occurring throughout Lake Malawi, extending from the surface to a depth of at least 220m. It is probably the most abundant cichlid in the lake with biomass estimates of around 87 000 tonnes in the pelagic zone alone. The species is exploited commercially in the southern part of the lake but since its inception the fishery has never been assessed. As such this study investigates some aspects of age and growth of the species besides applying a yield-per-recruit analysis to assess the status of the fishery. Analysis of sectioned sagittal otoliths revealed that D. limnothrissa is fast growing and relatively long-lived species, attaining ages in excess of 10 years. Growth in length was rapid in immature fish, with fish attaining almost half of their maximum size within their first year. Le ngth-at-age was described by the von Bertalanffy growth model with combined-sex growth described as Lt = 211.21(1-exp(- 0.24(t+1.36))) mm TL. Total, natural and fishing mortalities were estimated at 0.76 yr⁻¹, 0.31 yr⁻¹ and 0.45 yr⁻¹ respectively. Per-recruit analysis indicated that the D. limnothrissa stock in the southeast arm of the lake is fully exploited as indicated by the current spawner biomass-per-recruit ratios of 31-55% (SB/R)F=0. Modelling indicated that the current age-at-capture (2.67 years) is lower than the age at which yield is optimised (> 5 years) based on the F₀·₁ harvesting strategy. It is, therefore, recommended that the age-at-capture should be increased from 2.67 to 5 years to optimise yield.
- Full Text:
- Authors: Kanyerere, Geoffrey Zantute
- Date: 2004
- Subjects: Fishes -- Nyasa, Lake , Cichlids -- Nyasa, Lake , Fishes -- Growth -- Nyasa, Lake , Fishes -- Age -- Nyasa, Lake , Fishery resources -- Malawi , Fishery management -- Malawi
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5214 , http://hdl.handle.net/10962/d1005057 , Fishes -- Nyasa, Lake , Cichlids -- Nyasa, Lake , Fishes -- Growth -- Nyasa, Lake , Fishes -- Age -- Nyasa, Lake , Fishery resources -- Malawi , Fishery management -- Malawi
- Description: Diplotaxodon limnothrissa Turner (1995) is a widely distributed species occurring throughout Lake Malawi, extending from the surface to a depth of at least 220m. It is probably the most abundant cichlid in the lake with biomass estimates of around 87 000 tonnes in the pelagic zone alone. The species is exploited commercially in the southern part of the lake but since its inception the fishery has never been assessed. As such this study investigates some aspects of age and growth of the species besides applying a yield-per-recruit analysis to assess the status of the fishery. Analysis of sectioned sagittal otoliths revealed that D. limnothrissa is fast growing and relatively long-lived species, attaining ages in excess of 10 years. Growth in length was rapid in immature fish, with fish attaining almost half of their maximum size within their first year. Le ngth-at-age was described by the von Bertalanffy growth model with combined-sex growth described as Lt = 211.21(1-exp(- 0.24(t+1.36))) mm TL. Total, natural and fishing mortalities were estimated at 0.76 yr⁻¹, 0.31 yr⁻¹ and 0.45 yr⁻¹ respectively. Per-recruit analysis indicated that the D. limnothrissa stock in the southeast arm of the lake is fully exploited as indicated by the current spawner biomass-per-recruit ratios of 31-55% (SB/R)F=0. Modelling indicated that the current age-at-capture (2.67 years) is lower than the age at which yield is optimised (> 5 years) based on the F₀·₁ harvesting strategy. It is, therefore, recommended that the age-at-capture should be increased from 2.67 to 5 years to optimise yield.
- Full Text:
An assessment of density estimation methods for forest ungulates
- Authors: Ellis, Amanda Morgan
- Date: 2004
- Subjects: Wildlife management -- South Africa -- Eastern Cape Animal populations -- Estimates Wildlife conservation -- South Africa -- Eastern Cape Game farms -- South Africa -- Eastern Cape Ungulates -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5829 , http://hdl.handle.net/10962/d1007830
- Description: The development of conservation and management programs for an animal population relies on a knowledge of the number of individuals in an area. In order to achieve reliable estimates, precise and accurate techniques for estimating population densities are needed. This study compared the use of direct and indirect methods of estimating kudu (Trage/aphus strepsiceras), bush buck (Trage/aphus scriptus), common duiker (Sy/vicapra grimmia), and blue duiker (Philantamba manticala) densities on Shamwari Game Reserve in the Eastern Cape Province, South Africa. These species prefer habitats of dense forest and bush for concealment and are therefore not easily counted in open areas. Herein direct observation counts were compared to indirect sampling via pellet group counts (clearance plots, line transects, variable-width transects, and strip transects). Clearance plots were examined every 2 weeks, while all other methods were conducted seasonally, from August 2002 until August 2003. The strip transect method provided the lowest density estimates (animals per hal ranging from 0.001 for bushbuck to 0.025 for common duiker, while direct observations yielded the highest estimates, ranging from 0.804 for bush buck to 4.692 for kudu. Also, a validation of methods was performed against a known population of kudu during which the DISTANCE method yielded the most accurate results, with an estimated density of 0.261 that was within the actual density of 0.246 to 0.282. In addition, the DISTANCE method was compared to helicopter counts ofkudu and its estimates were found to be approximately 2.6 times greater than the helicopter count results. When the assessment of the methods was made, the cost, manpower and effort requirements, coefficient of variation, and performance against a known population for each method were taken into consideration. Overall, the DISTANCE method performed the best with low cost, minimal manpower and effort requirements, and low coefficient of variation. On Shamwari Game Reserve, the DISTANCE method estimated 0.300 kudu, 0.108 bushbuck, 0.387 common duiker, and 0.028 blue duiker per ha, which, when extrapolated to the total number of animals present within subtropical thicket habitat, estimated 1973 kudu, 710 bush buck, 2545 common duiker, and 184 blue duiker.
- Full Text:
- Authors: Ellis, Amanda Morgan
- Date: 2004
- Subjects: Wildlife management -- South Africa -- Eastern Cape Animal populations -- Estimates Wildlife conservation -- South Africa -- Eastern Cape Game farms -- South Africa -- Eastern Cape Ungulates -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5829 , http://hdl.handle.net/10962/d1007830
- Description: The development of conservation and management programs for an animal population relies on a knowledge of the number of individuals in an area. In order to achieve reliable estimates, precise and accurate techniques for estimating population densities are needed. This study compared the use of direct and indirect methods of estimating kudu (Trage/aphus strepsiceras), bush buck (Trage/aphus scriptus), common duiker (Sy/vicapra grimmia), and blue duiker (Philantamba manticala) densities on Shamwari Game Reserve in the Eastern Cape Province, South Africa. These species prefer habitats of dense forest and bush for concealment and are therefore not easily counted in open areas. Herein direct observation counts were compared to indirect sampling via pellet group counts (clearance plots, line transects, variable-width transects, and strip transects). Clearance plots were examined every 2 weeks, while all other methods were conducted seasonally, from August 2002 until August 2003. The strip transect method provided the lowest density estimates (animals per hal ranging from 0.001 for bushbuck to 0.025 for common duiker, while direct observations yielded the highest estimates, ranging from 0.804 for bush buck to 4.692 for kudu. Also, a validation of methods was performed against a known population of kudu during which the DISTANCE method yielded the most accurate results, with an estimated density of 0.261 that was within the actual density of 0.246 to 0.282. In addition, the DISTANCE method was compared to helicopter counts ofkudu and its estimates were found to be approximately 2.6 times greater than the helicopter count results. When the assessment of the methods was made, the cost, manpower and effort requirements, coefficient of variation, and performance against a known population for each method were taken into consideration. Overall, the DISTANCE method performed the best with low cost, minimal manpower and effort requirements, and low coefficient of variation. On Shamwari Game Reserve, the DISTANCE method estimated 0.300 kudu, 0.108 bushbuck, 0.387 common duiker, and 0.028 blue duiker per ha, which, when extrapolated to the total number of animals present within subtropical thicket habitat, estimated 1973 kudu, 710 bush buck, 2545 common duiker, and 184 blue duiker.
- Full Text:
An investigation into the captive spawning, egg characteristics and egg quality of the mud crab (Scylla serrata) in South Africa
- Authors: Churchill, Giles John
- Date: 2004
- Subjects: Scylla serrata , Crabs -- South Africa , Scylla serrata -- South Africa , Crabs -- Eggs -- Incubation , Crabs -- Spawning
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5376 , http://hdl.handle.net/10962/d1015963
- Description: The source of a reliable supply of seed is one of the most important factors determining the success of aquaculture. At present mud crab culture is reliant on wild caught juveniles, which limits the expansion of mud crab farming globally. This, coupled with the paucity of knowledge of the spawning and egg characteristics of mud crabs, prompted the investigation into the captive spawning, incubation and egg quality of Scylla serrata in South Africa. A total of 112 mature females were caught from three estuaries in northern KwaZulu Natal and acclimated to captive conditions. Mature females were present in the estuaries throughout the year and ranged from 90 to 200 mm carapace width. Except for 40 crabs all the females spawned in captivity. On average spawning took place 38 ± 23 days after capture but was not dependent on crab size. Fecundity was significantly correlated to crab size (p = 0.026), with larger females producing more eggs. The average fecundity per batch was 5.79 ± 2.07 million eggs. Hatch success rate for all egg batches was high averaging 84 ± 6 %. Egg dropping occurred in all egg batches during incubation. On average 6.5 % of the egg mass was dropped during incubation. At the average temperature of 27⁰C eggs in the incubation system hatched within 292 ± 12 hours after extrusion. In-vitro incubation of eggs proved to be an ineffective means of incubating Scylla serrata eggs with a hatch success rate of only 25 ± 5 %. Egg quality was assessed both directly, using variables such as hatch success rate and hatch synchronicity and retrospectively by using stress tests and comparing survival of larvae from different coloured egg batches. Lipid class composition and fatty acid methyl ester content for 28 batches of eggs and 16 batches of larvae were analyzed. The biochemical composition of the egg was correlated to survival of larvae in the stress tests to ascertain if the lipid content of the eggs determines their quality. Stress tests were used to retrospectively assess egg quality. Four stressors were administered to newly hatched larvae and the LD50 values recorded. An average LD50 of 64 hours was recorded for the starvation tests, 40% for the salinity tests, 37 ppm for the formalin tests and 39.7 mg/l NH3 for the ammonia stress tests was recorded. Egg colour ranged from pale yellow to orange-red. Egg colour was not influenced by female size or the time the females spent in captivity prior to spawning. Egg colour can therefore not be used as an indicator of quality. The lipid profiles of newly extruded eggs had no effect on hatch synchronicity or hatch success rate. However, the stress tests identified female size (p ≤ 0.02), DHA content of the egg (p ≤ 0.02), Σ omega-3 fatty acids of eggs (p ≤ 0.02) and EPA content of eggs (p ≤ 0.007) as possible determinants of egg quality. Larger crabs tended to produce poorer quality eggs. Egg quality also decreased as the amount of DHA, EPA and the Σ omega-3 fatty acids decreased in the eggs. To summarize, the results of this study indicated that the following parameters affect egg quality - crab size, DHA, EPA and Σ omega-3 fatty acid content of eggs.
- Full Text:
- Authors: Churchill, Giles John
- Date: 2004
- Subjects: Scylla serrata , Crabs -- South Africa , Scylla serrata -- South Africa , Crabs -- Eggs -- Incubation , Crabs -- Spawning
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5376 , http://hdl.handle.net/10962/d1015963
- Description: The source of a reliable supply of seed is one of the most important factors determining the success of aquaculture. At present mud crab culture is reliant on wild caught juveniles, which limits the expansion of mud crab farming globally. This, coupled with the paucity of knowledge of the spawning and egg characteristics of mud crabs, prompted the investigation into the captive spawning, incubation and egg quality of Scylla serrata in South Africa. A total of 112 mature females were caught from three estuaries in northern KwaZulu Natal and acclimated to captive conditions. Mature females were present in the estuaries throughout the year and ranged from 90 to 200 mm carapace width. Except for 40 crabs all the females spawned in captivity. On average spawning took place 38 ± 23 days after capture but was not dependent on crab size. Fecundity was significantly correlated to crab size (p = 0.026), with larger females producing more eggs. The average fecundity per batch was 5.79 ± 2.07 million eggs. Hatch success rate for all egg batches was high averaging 84 ± 6 %. Egg dropping occurred in all egg batches during incubation. On average 6.5 % of the egg mass was dropped during incubation. At the average temperature of 27⁰C eggs in the incubation system hatched within 292 ± 12 hours after extrusion. In-vitro incubation of eggs proved to be an ineffective means of incubating Scylla serrata eggs with a hatch success rate of only 25 ± 5 %. Egg quality was assessed both directly, using variables such as hatch success rate and hatch synchronicity and retrospectively by using stress tests and comparing survival of larvae from different coloured egg batches. Lipid class composition and fatty acid methyl ester content for 28 batches of eggs and 16 batches of larvae were analyzed. The biochemical composition of the egg was correlated to survival of larvae in the stress tests to ascertain if the lipid content of the eggs determines their quality. Stress tests were used to retrospectively assess egg quality. Four stressors were administered to newly hatched larvae and the LD50 values recorded. An average LD50 of 64 hours was recorded for the starvation tests, 40% for the salinity tests, 37 ppm for the formalin tests and 39.7 mg/l NH3 for the ammonia stress tests was recorded. Egg colour ranged from pale yellow to orange-red. Egg colour was not influenced by female size or the time the females spent in captivity prior to spawning. Egg colour can therefore not be used as an indicator of quality. The lipid profiles of newly extruded eggs had no effect on hatch synchronicity or hatch success rate. However, the stress tests identified female size (p ≤ 0.02), DHA content of the egg (p ≤ 0.02), Σ omega-3 fatty acids of eggs (p ≤ 0.02) and EPA content of eggs (p ≤ 0.007) as possible determinants of egg quality. Larger crabs tended to produce poorer quality eggs. Egg quality also decreased as the amount of DHA, EPA and the Σ omega-3 fatty acids decreased in the eggs. To summarize, the results of this study indicated that the following parameters affect egg quality - crab size, DHA, EPA and Σ omega-3 fatty acid content of eggs.
- Full Text:
An investigation into the neuroprotective effects of melatonin in a model of rotenone-induced neurodegeneration
- Authors: Kadanthode, Rubina John
- Date: 2004
- Subjects: Melatonin , Nervous system -- Degeneration -- Treatment , Rotenone
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3763 , http://hdl.handle.net/10962/d1003241 , Melatonin , Nervous system -- Degeneration -- Treatment , Rotenone
- Description: Parkinson’s disease, one of the most common neurodegenerative disorders associated with ageing, is characterised by abnormal and profound loss of nigrostriatal dopaminergic neurons. The cause of Parkinson’s disease is unknown, but epidemiological studies suggest an association with pesticides and other environmental toxins, and biochemical studies implicate oxidative damage and mitochondrial impairment, particularly at the level of complex I enzyme. Recently, rotenone, a commonly used organic pesticide and a classical inhibitor of mitochondrial complex I has been reported to reproduce the specific features of Parkinson’s disease in rodents. The mitochondrial respiratory chain is one of the most important sites of reactive oxygen species production under physiological conditions. Toxic free radicals have been implicated in a variety of neurodegenerative diseases as well as ageing itself. Melatonin, a secretory product of the pineal gland is a multifaceted free radical scavenger and natural antioxidant. In the present study, the neuroprotective effects of melatonin against the environmental neurotoxin, rotenone was investigated. Initial studies showed that inhibition of mitochondrial complex I enzyme by rotenone induced superoxide radical generation. Melatonin, administered to the rat in vivo and in vitro was able to offer neuroprotection by curtailing the production of superoxide radicals induced by rotenone. Mitochondria, being the major target of rotenone, the effects of melatonin were investigated at the mitochondrial level. Melatonin was able to increase the electron transport chain activity thus preventing the respiratory inhibition by rotenone. The pineal hormone also counteracted the action of rotenone on complex I enzyme. These results suggest melatonin’s ability to potentially limit the free radical generation and thereby modulate the mitochondrial functions. The detection and measurement of lipid peroxidation is the evidence most frequently cited to support the involvement of free radical reactions in toxicology and in human disease. Melatonin also offered significant protection in vivo and in vitro against rotenone induced lipid peroxidation. Since iron plays a major role in oxidative damage and in the progression of Parkinson’s disease, the effect of melatonin on both rotenone and iron induced lipid peroxidation was investigated, the results of which show that melatonin affords protection and this was suggested to be due to its interaction with the rotenone-iron complex that might have formed. Electrochemical studies were further used to characterise the interactions between melatonin, rotenone and iron (III). Melatonin was shown to bind with iron and thus reducing their toxicity. Histological studies were undertaken to assess the effects of melatonin on rotenone induced toxicity on the dopaminergic neurons in the rat brain. Rotenone treated brains showed extensive neuronal damage whereas with melatonin less damage was observed. Rotenone induces apoptosis via reactive oxygen species production and apoptotic cell death has been identified in PD brains. Furthermore, the apoptotic cell death was detected and quantified by the TUNEL staining. Rotenone treated sections showed signs of apoptosis whereas with melatonin, less apoptotic damage was observed. The findings of this study indicate that the neurohormone, melatonin may protect against rotenone-induced neurodegeneration. Since melatonin production falls substantially during ageing, the loss of this antioxidant is theorized to be instrumental in the degenerative processes associated with advanced age. Considering how devastating diseases such as Parkinson’s disease, are to a patient and the patient’s families, the discovery of protective agents are a matter of urgency. Further investigations using the pesticide model will help to determine the involvement of environmental exposure in the pathogenesis of human diseases as well as to test therapeutic strategies for the treatment of such diseases.
- Full Text:
- Authors: Kadanthode, Rubina John
- Date: 2004
- Subjects: Melatonin , Nervous system -- Degeneration -- Treatment , Rotenone
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3763 , http://hdl.handle.net/10962/d1003241 , Melatonin , Nervous system -- Degeneration -- Treatment , Rotenone
- Description: Parkinson’s disease, one of the most common neurodegenerative disorders associated with ageing, is characterised by abnormal and profound loss of nigrostriatal dopaminergic neurons. The cause of Parkinson’s disease is unknown, but epidemiological studies suggest an association with pesticides and other environmental toxins, and biochemical studies implicate oxidative damage and mitochondrial impairment, particularly at the level of complex I enzyme. Recently, rotenone, a commonly used organic pesticide and a classical inhibitor of mitochondrial complex I has been reported to reproduce the specific features of Parkinson’s disease in rodents. The mitochondrial respiratory chain is one of the most important sites of reactive oxygen species production under physiological conditions. Toxic free radicals have been implicated in a variety of neurodegenerative diseases as well as ageing itself. Melatonin, a secretory product of the pineal gland is a multifaceted free radical scavenger and natural antioxidant. In the present study, the neuroprotective effects of melatonin against the environmental neurotoxin, rotenone was investigated. Initial studies showed that inhibition of mitochondrial complex I enzyme by rotenone induced superoxide radical generation. Melatonin, administered to the rat in vivo and in vitro was able to offer neuroprotection by curtailing the production of superoxide radicals induced by rotenone. Mitochondria, being the major target of rotenone, the effects of melatonin were investigated at the mitochondrial level. Melatonin was able to increase the electron transport chain activity thus preventing the respiratory inhibition by rotenone. The pineal hormone also counteracted the action of rotenone on complex I enzyme. These results suggest melatonin’s ability to potentially limit the free radical generation and thereby modulate the mitochondrial functions. The detection and measurement of lipid peroxidation is the evidence most frequently cited to support the involvement of free radical reactions in toxicology and in human disease. Melatonin also offered significant protection in vivo and in vitro against rotenone induced lipid peroxidation. Since iron plays a major role in oxidative damage and in the progression of Parkinson’s disease, the effect of melatonin on both rotenone and iron induced lipid peroxidation was investigated, the results of which show that melatonin affords protection and this was suggested to be due to its interaction with the rotenone-iron complex that might have formed. Electrochemical studies were further used to characterise the interactions between melatonin, rotenone and iron (III). Melatonin was shown to bind with iron and thus reducing their toxicity. Histological studies were undertaken to assess the effects of melatonin on rotenone induced toxicity on the dopaminergic neurons in the rat brain. Rotenone treated brains showed extensive neuronal damage whereas with melatonin less damage was observed. Rotenone induces apoptosis via reactive oxygen species production and apoptotic cell death has been identified in PD brains. Furthermore, the apoptotic cell death was detected and quantified by the TUNEL staining. Rotenone treated sections showed signs of apoptosis whereas with melatonin, less apoptotic damage was observed. The findings of this study indicate that the neurohormone, melatonin may protect against rotenone-induced neurodegeneration. Since melatonin production falls substantially during ageing, the loss of this antioxidant is theorized to be instrumental in the degenerative processes associated with advanced age. Considering how devastating diseases such as Parkinson’s disease, are to a patient and the patient’s families, the discovery of protective agents are a matter of urgency. Further investigations using the pesticide model will help to determine the involvement of environmental exposure in the pathogenesis of human diseases as well as to test therapeutic strategies for the treatment of such diseases.
- Full Text:
Biochemical characterization of plasmodium falciparum heat shock protein 70
- Matambo, Tonderayi Sylvester
- Authors: Matambo, Tonderayi Sylvester
- Date: 2004
- Subjects: Plasmodium falciparum , Malaria -- Prevention , Protein folding , Proteins -- Purification , Heat shock proteins
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4134 , http://hdl.handle.net/10962/d1015767
- Description: Plamodium falciparum heat shock protein (PfHsp70) is believed to be involved in the cytoprotection of the malaria parasite through its action as a molecular chaperone. Bioinformatic analysis reveal that PfHsp70 consists of the three canonical Hsp70 domains; an ATPase domain of 45 kDa, Substrate binding domain of 15 kDa and a C-terminal domain of 10 kDa. At the C-terminus there is a GGMP repeat motif that is commonly found in Hsp70s of parasitic origins. Plasmodium falciparum genome is 80% A-T rich, making it difficult to recombinantly express its proteins in Escherhia coli (E. coli) as a result of rare codon usage. In this study we carried out experiments to improve expression in E. coli by inserting the PfHsp70 coding region into the pQE30 expression vector. However multiple bands were detected by Western analysis, probably due to the presence of rare codons. The RIG plasmid, which encodes tRNAs for rare codons in particular Arg (AGA/AGG), Ile (AUA) and Gly (GGA) was engineered into the E. coli strain resulting in production of full length PfHsp70. Purification was achieved through Ni²⁺ Chelating sepharose under denaturing conditions. PfHsp70 was found to have a very low basal ATPase activity of 0.262 ± 0.05 nmoles/min/mg of protein. In the presence of reduced and carboxymethylated lactalbumin (RCMLA) a 11-fold increase in ATPase activity was noted whereas in the presence of both RCMLA and Trypanosoma cruzi DnaJ (Tcj2) a 16-fold was achieved. For ATP hydrolysis kcat value of 0.003 min⁻¹ was obtained whereas for ADP release a greater kcat value of 0.8 min⁻¹ was obtained. These results indicated that rate of ATP hydrolysis maybe the rate-determining step in the ATPase cycle of PfHsp70.
- Full Text:
- Authors: Matambo, Tonderayi Sylvester
- Date: 2004
- Subjects: Plasmodium falciparum , Malaria -- Prevention , Protein folding , Proteins -- Purification , Heat shock proteins
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4134 , http://hdl.handle.net/10962/d1015767
- Description: Plamodium falciparum heat shock protein (PfHsp70) is believed to be involved in the cytoprotection of the malaria parasite through its action as a molecular chaperone. Bioinformatic analysis reveal that PfHsp70 consists of the three canonical Hsp70 domains; an ATPase domain of 45 kDa, Substrate binding domain of 15 kDa and a C-terminal domain of 10 kDa. At the C-terminus there is a GGMP repeat motif that is commonly found in Hsp70s of parasitic origins. Plasmodium falciparum genome is 80% A-T rich, making it difficult to recombinantly express its proteins in Escherhia coli (E. coli) as a result of rare codon usage. In this study we carried out experiments to improve expression in E. coli by inserting the PfHsp70 coding region into the pQE30 expression vector. However multiple bands were detected by Western analysis, probably due to the presence of rare codons. The RIG plasmid, which encodes tRNAs for rare codons in particular Arg (AGA/AGG), Ile (AUA) and Gly (GGA) was engineered into the E. coli strain resulting in production of full length PfHsp70. Purification was achieved through Ni²⁺ Chelating sepharose under denaturing conditions. PfHsp70 was found to have a very low basal ATPase activity of 0.262 ± 0.05 nmoles/min/mg of protein. In the presence of reduced and carboxymethylated lactalbumin (RCMLA) a 11-fold increase in ATPase activity was noted whereas in the presence of both RCMLA and Trypanosoma cruzi DnaJ (Tcj2) a 16-fold was achieved. For ATP hydrolysis kcat value of 0.003 min⁻¹ was obtained whereas for ADP release a greater kcat value of 0.8 min⁻¹ was obtained. These results indicated that rate of ATP hydrolysis maybe the rate-determining step in the ATPase cycle of PfHsp70.
- Full Text:
Changes in energy use patterns in the Bushbuckridge Lowveld of the Limpopo Province, South Africa: eleven years on
- Authors: Madubansi, Mainza
- Date: 2004
- Subjects: Energy consumption -- South Africa -- Limpopo
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4756 , http://hdl.handle.net/10962/d1007139 , Energy consumption -- South Africa -- Limpopo
- Description: This research reports on the energy transition that has taken place in the Bushbuckridge district between 1991 and 2002. It is a follow up to a similar study that was done in 1991 investigating a number of aspects of energy use. It uses the 1991 study as a baseline and aims to explore how the passage of time, growth of the local population and changes in incomes and the availability of fuels have affected the patterns of fuel use in the region in the past eleven years. A structured interview approach was used for most aspects of the study. The interview schedule included sections on types, amounts and reasons for use and non-use of 13 different energy sources as well as data on income levels, household size and other economic parameters. Analysis of the consumption patterns of the different fuel types revealed that between the two survey periods, households in the sample settlements went through some pronounced changes in patterns of fuel use, particularly those that had acquired electricity. The introduction of electricity in the region had certainly played a major role in spurring the energy transition. Fuels that were previously used for lighting, powering entertainment appliances and refrigeration had been displaced by electricity. In terms of cooking and other thermal application, however, the vast majority of households in all the sample settlements continued using fuelwood and complemented it to a lesser extent with paraffin and electricity. In both surveys, the use or non-use of available fuels in the region was influenced by several factors. Common reasons for non-use of certain fuel types included expense, lack of appliances, the risk involved in using such fuels and the preference for other fuels. Reasons for use were mainly related to the low cost of the fuel and the fuel’s ability to meet particular end uses. Although incomes in the region had increased between 1991 and 2002, they were still below the poverty line. Activities from which households obtained their income remained the same. Old age pension, migrant wages and the informal sector remained the largest contributors of income to most households. Other indicators of relative wealth and poverty, like ownership of vehicles, bicycles and beds remained the same.
- Full Text:
- Authors: Madubansi, Mainza
- Date: 2004
- Subjects: Energy consumption -- South Africa -- Limpopo
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4756 , http://hdl.handle.net/10962/d1007139 , Energy consumption -- South Africa -- Limpopo
- Description: This research reports on the energy transition that has taken place in the Bushbuckridge district between 1991 and 2002. It is a follow up to a similar study that was done in 1991 investigating a number of aspects of energy use. It uses the 1991 study as a baseline and aims to explore how the passage of time, growth of the local population and changes in incomes and the availability of fuels have affected the patterns of fuel use in the region in the past eleven years. A structured interview approach was used for most aspects of the study. The interview schedule included sections on types, amounts and reasons for use and non-use of 13 different energy sources as well as data on income levels, household size and other economic parameters. Analysis of the consumption patterns of the different fuel types revealed that between the two survey periods, households in the sample settlements went through some pronounced changes in patterns of fuel use, particularly those that had acquired electricity. The introduction of electricity in the region had certainly played a major role in spurring the energy transition. Fuels that were previously used for lighting, powering entertainment appliances and refrigeration had been displaced by electricity. In terms of cooking and other thermal application, however, the vast majority of households in all the sample settlements continued using fuelwood and complemented it to a lesser extent with paraffin and electricity. In both surveys, the use or non-use of available fuels in the region was influenced by several factors. Common reasons for non-use of certain fuel types included expense, lack of appliances, the risk involved in using such fuels and the preference for other fuels. Reasons for use were mainly related to the low cost of the fuel and the fuel’s ability to meet particular end uses. Although incomes in the region had increased between 1991 and 2002, they were still below the poverty line. Activities from which households obtained their income remained the same. Old age pension, migrant wages and the informal sector remained the largest contributors of income to most households. Other indicators of relative wealth and poverty, like ownership of vehicles, bicycles and beds remained the same.
- Full Text:
Cleaning of fouled membranes using enzymes from a sulphidogenic bioreactor
- Authors: Melamane, Xolisa
- Date: 2004
- Subjects: Membrane filters , Membrane filters -- Fouling , Enzymes -- Biotechnology , Enzymes -- Purification , Water -- Purification -- Membrane filtration , Ultrafiltration
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4133 , http://hdl.handle.net/10962/d1015764
- Description: Maintenance of membrane performance requires inevitable cleaning or defouling of fouled membranes. Membrane cleaning using enzymes such as proteases, lipases, α-glucosidases from a sulphidogenic bioreactor was investigated. At first, dilute and concentrated enzyme extract were prepared form the sulphidogenic pellet. Enzyme assays on 0.5 % azocaisen, 1 % triacetin and 1 mg/ml ρ-nitrophenyl-α-D-glucopyranoside were performed using the concentrated enzyme extract (0 – 200 mg/ml). For membrane fouling, an abattoir effluent was obtained from Ostritech Pty (Ltd), Grahamstown, South Africa. The effluent was characterised for presence of potential foulants such as lipids, proteins, amino acids and carbohydrates. Static fouling of polysulphone membranes (0.22 μm, 47 mm) was then performed using the abattoir effluent. Cleaning of the fouled membranes was also performed using at first the dilute and then the concentrated form (200 mg/ml) of enzyme extracts. Qualitative and quantitative biochemical analysis for proteins, lipids and carbohydrates was performed to ascertain the presence of foulants on polysulphone membranes and their removal by dilute or concentrated enzyme extracts. The ability of dilute enzyme extracts to remove proteins lipids, and carbohydrates fouling capillary UF membrane module; their ability to restore permeate fluxes and transmembrane pressure after cleaning/defouling was also investigated. Permeate volumes from this UF membrane module were analysed for protein, amino acids, lipids, and carbohydrates concentrations after fouling and defouling. Fouling was further characterized by standard blocking, cake filtration and pore blocking models using stirred UF cell and polyethersulphone membranes with MWCO of 30 000, 100 000 and 300 000. After characterization of fouling, polyethersulphone membranes with MWCO of 30 000 and 300 000 were defouled using the concentrated enzyme extract (100 mg ml). Enzyme activities at 200 mg/ml of enzyme concentration were 8.071 IU, 86.71 IU and 789.02 IU for proteases, lipases and α-glucosidases. The abattoir effluent contained 553 μg/ml of lipid, 301 μg/ml of protein, 141 μg/ml of total carbohydrate, and 0.63 μg/ml of total reducing sugars. Proteins, lipids and carbohydrates fouling polysulphone membranes after a day were removed by 23.4 %, when a dilute enzyme was used. A concentrated enzyme extract of 200 mg/ml was able to remove proteins, lipids and carbohydrates up to 5 days of fouling by 100 %, 82 %, 71 %, 68 % and 76 % respectively. Defouling of dynamically fouled capillary ultrafiltration membranes using sulphidogenic proteases was successful at pH 10, 37°C, within 1 hour. Sulphidogenic proteases activity was 2.1 U/ml and flux Recovery (FR %) was 64. Characterization of fouling revealed that proteins and lipids were major foulants while low concentration of carbohydrates fouled polyethersulphone membranes. Fouling followed standard blocking for 10 minutes in all the membranes; afterwards fouling adopted cake filtration model for membranes with 30 000 MWCO and pore blocking model for membranes with 300 000 MWCO. A concentration of 100 mg/ml of enzyme extract was able to remove fouling from membranes with MWCO of 30 000. Defouling membranes that followed pore blocking model i.e. 300 000 MWCO was not successful due to a mass transfer problem. From the results of defouling of 30 000 and 300 000 MWCO it was concluded that defouling of cake layer fouling (30 000 MWCO) was successful while defouling of pore blocking fouling was unsuccessful due to a mass transfer problem. The ratio of enzymes present in the enzyme extract when calculated based on enzymatic activity for proteases, lipases and α-glucosidases was 1.1 %, 11 % and 87.9 %. It was hypothesized that apart from proteases, lipases, α and β-glucosidases; phosphatases, sulphatases, amonipeptidases etc. from a sulphidogenic bioreactor clean or defoul cake layer fouling by organic foulants and pore blocking fouling provided the mass transfer problem is solved. However, concentration of enzymes from a sulphidogenic bioreactor has not been optimized yet. Other methods of concentrating the enzyme extract can be investigated for example use of organic solvents.
- Full Text:
- Authors: Melamane, Xolisa
- Date: 2004
- Subjects: Membrane filters , Membrane filters -- Fouling , Enzymes -- Biotechnology , Enzymes -- Purification , Water -- Purification -- Membrane filtration , Ultrafiltration
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4133 , http://hdl.handle.net/10962/d1015764
- Description: Maintenance of membrane performance requires inevitable cleaning or defouling of fouled membranes. Membrane cleaning using enzymes such as proteases, lipases, α-glucosidases from a sulphidogenic bioreactor was investigated. At first, dilute and concentrated enzyme extract were prepared form the sulphidogenic pellet. Enzyme assays on 0.5 % azocaisen, 1 % triacetin and 1 mg/ml ρ-nitrophenyl-α-D-glucopyranoside were performed using the concentrated enzyme extract (0 – 200 mg/ml). For membrane fouling, an abattoir effluent was obtained from Ostritech Pty (Ltd), Grahamstown, South Africa. The effluent was characterised for presence of potential foulants such as lipids, proteins, amino acids and carbohydrates. Static fouling of polysulphone membranes (0.22 μm, 47 mm) was then performed using the abattoir effluent. Cleaning of the fouled membranes was also performed using at first the dilute and then the concentrated form (200 mg/ml) of enzyme extracts. Qualitative and quantitative biochemical analysis for proteins, lipids and carbohydrates was performed to ascertain the presence of foulants on polysulphone membranes and their removal by dilute or concentrated enzyme extracts. The ability of dilute enzyme extracts to remove proteins lipids, and carbohydrates fouling capillary UF membrane module; their ability to restore permeate fluxes and transmembrane pressure after cleaning/defouling was also investigated. Permeate volumes from this UF membrane module were analysed for protein, amino acids, lipids, and carbohydrates concentrations after fouling and defouling. Fouling was further characterized by standard blocking, cake filtration and pore blocking models using stirred UF cell and polyethersulphone membranes with MWCO of 30 000, 100 000 and 300 000. After characterization of fouling, polyethersulphone membranes with MWCO of 30 000 and 300 000 were defouled using the concentrated enzyme extract (100 mg ml). Enzyme activities at 200 mg/ml of enzyme concentration were 8.071 IU, 86.71 IU and 789.02 IU for proteases, lipases and α-glucosidases. The abattoir effluent contained 553 μg/ml of lipid, 301 μg/ml of protein, 141 μg/ml of total carbohydrate, and 0.63 μg/ml of total reducing sugars. Proteins, lipids and carbohydrates fouling polysulphone membranes after a day were removed by 23.4 %, when a dilute enzyme was used. A concentrated enzyme extract of 200 mg/ml was able to remove proteins, lipids and carbohydrates up to 5 days of fouling by 100 %, 82 %, 71 %, 68 % and 76 % respectively. Defouling of dynamically fouled capillary ultrafiltration membranes using sulphidogenic proteases was successful at pH 10, 37°C, within 1 hour. Sulphidogenic proteases activity was 2.1 U/ml and flux Recovery (FR %) was 64. Characterization of fouling revealed that proteins and lipids were major foulants while low concentration of carbohydrates fouled polyethersulphone membranes. Fouling followed standard blocking for 10 minutes in all the membranes; afterwards fouling adopted cake filtration model for membranes with 30 000 MWCO and pore blocking model for membranes with 300 000 MWCO. A concentration of 100 mg/ml of enzyme extract was able to remove fouling from membranes with MWCO of 30 000. Defouling membranes that followed pore blocking model i.e. 300 000 MWCO was not successful due to a mass transfer problem. From the results of defouling of 30 000 and 300 000 MWCO it was concluded that defouling of cake layer fouling (30 000 MWCO) was successful while defouling of pore blocking fouling was unsuccessful due to a mass transfer problem. The ratio of enzymes present in the enzyme extract when calculated based on enzymatic activity for proteases, lipases and α-glucosidases was 1.1 %, 11 % and 87.9 %. It was hypothesized that apart from proteases, lipases, α and β-glucosidases; phosphatases, sulphatases, amonipeptidases etc. from a sulphidogenic bioreactor clean or defoul cake layer fouling by organic foulants and pore blocking fouling provided the mass transfer problem is solved. However, concentration of enzymes from a sulphidogenic bioreactor has not been optimized yet. Other methods of concentrating the enzyme extract can be investigated for example use of organic solvents.
- Full Text:
CREWS : a Component-driven, Run-time Extensible Web Service framework
- Authors: Parry, Dominic Charles
- Date: 2004
- Subjects: Component software -- Development , Computer software -- Reusability , Software reengineering , Web services
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4628 , http://hdl.handle.net/10962/d1006501 , Component software -- Development , Computer software -- Reusability , Software reengineering , Web services
- Description: There has been an increased focus in recent years on the development of re-usable software, in the form of objects and software components. This increase, together with pressures from enterprises conducting transactions on the Web to support all business interactions on all scales, has encouraged research towards the development of easily reconfigurable and highly adaptable Web services. This work investigates the ability of Component-Based Software Development (CBSD) to produce such systems, and proposes a more manageable use of CBSD methodologies. Component-Driven Software Development (CDSD) is introduced to enable better component manageability. Current Web service technologies are also examined to determine their ability to support extensible Web services, and a dynamic Web service architecture is proposed. The work also describes the development of two proof-of-concept systems, DREW Chat and Hamilton Bank. DREW Chat and Hamilton Bank are implementations of Web services that support extension dynamically and at run-time. DREW Chat is implemented on the client side, where the user is given the ability to change the client as required. Hamilton Bank is a server-side implementation, which is run-time customisable by both the user and the party offering the service. In each case, a generic architecture is produced to support dynamic Web services. These architectures are combined to produce CREWS, a Component-driven Runtime Extensible Web Service solution that enables Web services to support the ever changing needs of enterprises. A discussion of similar work is presented, identifying the strengths and weaknesses of our architecture when compared to other solutions.
- Full Text:
- Authors: Parry, Dominic Charles
- Date: 2004
- Subjects: Component software -- Development , Computer software -- Reusability , Software reengineering , Web services
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4628 , http://hdl.handle.net/10962/d1006501 , Component software -- Development , Computer software -- Reusability , Software reengineering , Web services
- Description: There has been an increased focus in recent years on the development of re-usable software, in the form of objects and software components. This increase, together with pressures from enterprises conducting transactions on the Web to support all business interactions on all scales, has encouraged research towards the development of easily reconfigurable and highly adaptable Web services. This work investigates the ability of Component-Based Software Development (CBSD) to produce such systems, and proposes a more manageable use of CBSD methodologies. Component-Driven Software Development (CDSD) is introduced to enable better component manageability. Current Web service technologies are also examined to determine their ability to support extensible Web services, and a dynamic Web service architecture is proposed. The work also describes the development of two proof-of-concept systems, DREW Chat and Hamilton Bank. DREW Chat and Hamilton Bank are implementations of Web services that support extension dynamically and at run-time. DREW Chat is implemented on the client side, where the user is given the ability to change the client as required. Hamilton Bank is a server-side implementation, which is run-time customisable by both the user and the party offering the service. In each case, a generic architecture is produced to support dynamic Web services. These architectures are combined to produce CREWS, a Component-driven Runtime Extensible Web Service solution that enables Web services to support the ever changing needs of enterprises. A discussion of similar work is presented, identifying the strengths and weaknesses of our architecture when compared to other solutions.
- Full Text:
Design of a performance evaluation tool for multimedia databases with special reference to Oracle
- Authors: Stakemire, Tonia
- Date: 2004
- Subjects: Oracle (Computer file) , Application software -- Evaluation , Database management -- Evaluation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4705 , http://hdl.handle.net/10962/d1015975
- Description: Increased production and use of multimedia data has led to the development of a more advanced Database Management System (DBMS), like an Object Relational Database Management System (ORDBMS). These advanced databases are necessitated by the complexity in structure and the functionality required by multimedia data. Unfortunately, no suitable benchmarks exist with which to test the performance of databases when handling multimedia data. This thesis describes the design of a benchmark to measure the performance of basic functionality found in multimedia databases. The benchmark, called MORD (Multimedia Object Relational Databases), targets Oracle, a well known commercial Object Relational Database Management System (ORDBMS) that can handle multimedia data. Although MORD targets Oracle, it can easily be applied to other Multimedia Database Management System (MMDBMS) as a result of a design that stressed its portability, and simplicity. MORD consists of a database schema, test data, and code to simulate representative queries on multimedia databases. A number of experiments are described that validate MORD and ensure its correct design and that its objectives are met. A by-product of these experiments is an initial understanding of the performance of multimedia databases. The experiments show that with multimedia data the buffer cache should be at least large enough to hold the largest dataset, a bigger block size improves the performance, and turning off logging and caching for bulk loading improves the performance. MORD can be used to compare different ORDBMS or to assist in the configuration of a specific database.
- Full Text:
- Authors: Stakemire, Tonia
- Date: 2004
- Subjects: Oracle (Computer file) , Application software -- Evaluation , Database management -- Evaluation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4705 , http://hdl.handle.net/10962/d1015975
- Description: Increased production and use of multimedia data has led to the development of a more advanced Database Management System (DBMS), like an Object Relational Database Management System (ORDBMS). These advanced databases are necessitated by the complexity in structure and the functionality required by multimedia data. Unfortunately, no suitable benchmarks exist with which to test the performance of databases when handling multimedia data. This thesis describes the design of a benchmark to measure the performance of basic functionality found in multimedia databases. The benchmark, called MORD (Multimedia Object Relational Databases), targets Oracle, a well known commercial Object Relational Database Management System (ORDBMS) that can handle multimedia data. Although MORD targets Oracle, it can easily be applied to other Multimedia Database Management System (MMDBMS) as a result of a design that stressed its portability, and simplicity. MORD consists of a database schema, test data, and code to simulate representative queries on multimedia databases. A number of experiments are described that validate MORD and ensure its correct design and that its objectives are met. A by-product of these experiments is an initial understanding of the performance of multimedia databases. The experiments show that with multimedia data the buffer cache should be at least large enough to hold the largest dataset, a bigger block size improves the performance, and turning off logging and caching for bulk loading improves the performance. MORD can be used to compare different ORDBMS or to assist in the configuration of a specific database.
- Full Text:
DRUBIS : a distributed face-identification experimentation framework - design, implementation and performance issues
- Authors: Ndlangisa, Mboneli
- Date: 2004
- Subjects: Principal components analysis , Human face recognition (Computer science) , Image processing , Biometric identification
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4704 , http://hdl.handle.net/10962/d1015768
- Description: We report on the design, implementation and performance issues of the DRUBIS (Distributed Rhodes University Biometric Identification System) experimentation framework. The Principal Component Analysis (PCA) face-recognition approach is used as a case study. DRUBIS is a flexible experimentation framework, distributed over a number of modules that are easily pluggable and swappable, allowing for the easy construction of prototype systems. Web services are the logical means of distributing DRUBIS components and a number of prototype applications have been implemented from this framework. Different popular PCA face-recognition related experiments were used to evaluate our experimentation framework. We extract recognition performance measures from these experiments. In particular, we use the framework for a more indepth study of the suitability of the DFFS (Difference From Face Space) metric as a means for image classification in the area of race and gender determination.
- Full Text:
- Authors: Ndlangisa, Mboneli
- Date: 2004
- Subjects: Principal components analysis , Human face recognition (Computer science) , Image processing , Biometric identification
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4704 , http://hdl.handle.net/10962/d1015768
- Description: We report on the design, implementation and performance issues of the DRUBIS (Distributed Rhodes University Biometric Identification System) experimentation framework. The Principal Component Analysis (PCA) face-recognition approach is used as a case study. DRUBIS is a flexible experimentation framework, distributed over a number of modules that are easily pluggable and swappable, allowing for the easy construction of prototype systems. Web services are the logical means of distributing DRUBIS components and a number of prototype applications have been implemented from this framework. Different popular PCA face-recognition related experiments were used to evaluate our experimentation framework. We extract recognition performance measures from these experiments. In particular, we use the framework for a more indepth study of the suitability of the DFFS (Difference From Face Space) metric as a means for image classification in the area of race and gender determination.
- Full Text:
Fishes in the Mngazi and Mngazana estuaries, with particular emphasis on the community structure and primary carbon sources
- Authors: Mbande, Sekiwe
- Date: 2004
- Subjects: Fishes -- South Africa -- Mngazi Estuary , Fishes -- South Africa -- Mngazana Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazi Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazana Estuary , Estuarine fishes -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape , Fishes -- Physiology , Fishes -- Effect of water quality on , Fishes -- Effect of temperature on , Fishes -- Food , Fishes -- Effect of turbidity on
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5700 , http://hdl.handle.net/10962/d1005386 , Fishes -- South Africa -- Mngazi Estuary , Fishes -- South Africa -- Mngazana Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazi Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazana Estuary , Estuarine fishes -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape , Fishes -- Physiology , Fishes -- Effect of water quality on , Fishes -- Effect of temperature on , Fishes -- Food , Fishes -- Effect of turbidity on
- Description: The fish community structure of two contrasting estuaries, one with a well developed mangrove forest (Mngazana) and the other without mangroves (Mngazi) was compared. Both the Mngazi and Mngazana estuary fish communities were dominated by marine species, reflecting the importance of these systems as nursery areas for marine fishes. The Mngazi Estuary contained 18% more estuarine fishes in terms of catch per unit effort (CPUE) than the Mngazana Estuary. The reduced tidal influence due to the narrow mouth opening is a possible reason for the heightened CPUE of estuarine species in the Mngazi estuary. The recorded higher diversity of fish species in the Mngazana Estuary when compared with the Mngazi Estuary was attributed to the greater influence of the marine environment due to the wide permanently open mouth, as well as the presence of a variety of habitats in this system. In both estuaries tropical and temperate species were captured, confirming the transitional nature of their biogeographic location which is situated close to the boundary between the subtropical and warm temperate regions of the Southern African coastline. Contrary to previous studies, which recorded seasonal changes in the proportions of tropical and temperate species, the proportions of tropical species remained unchanged at approximately 70% during the January and June sampling occasions. Global warming as a possible reason for the increased dominance of tropical species is discussed. Although several studies in southern Africa have investigated estuarine food web structure, none have compared mangrove and non-mangrove estuaries. In this study, the primary sources of carbon utilised by the fish fauna in the Mngazi and Mngazana estuaries was investigated. The carbon isotopic values of fishes in both estuaries displayed a continuum rather than a tight clustering around particular energy sources. Most detritus feeders of the family Mugilidae (mullets) from both estuaries were relatively more enriched than other fish taxa. The isotopic values of the mullet species suggest a diet derived from relatively enriched carbon sources such as benthic microalgae, the eelgrass Zostera capensis and associated epiphytes. Based on the isotopic values, piscivorous fishes from both estuaries could not be linked to specific prey fish taxa, but clearly the mullet species were not their main food source. The invertebrate feeders that were found in both estuaries showed greater isotopic variations in the Mngazana Estuary than in the Mngazi Estuary, probably reflecting the higher diversity of habitats (carbon sources) and invertebrate prey species in the Mngazana system. Generally the isotopic signatures of fishes from the Mngazi Estuary were more enriched than those from the Mngazana Estuary, thus indicating the possible effect of δ¹³C depleted mangrove derived carbon in the latter system.
- Full Text:
- Authors: Mbande, Sekiwe
- Date: 2004
- Subjects: Fishes -- South Africa -- Mngazi Estuary , Fishes -- South Africa -- Mngazana Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazi Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazana Estuary , Estuarine fishes -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape , Fishes -- Physiology , Fishes -- Effect of water quality on , Fishes -- Effect of temperature on , Fishes -- Food , Fishes -- Effect of turbidity on
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5700 , http://hdl.handle.net/10962/d1005386 , Fishes -- South Africa -- Mngazi Estuary , Fishes -- South Africa -- Mngazana Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazi Estuary , Fishes -- Effect of habitat modification on -- South Africa -- Mngazana Estuary , Estuarine fishes -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape , Fishes -- Physiology , Fishes -- Effect of water quality on , Fishes -- Effect of temperature on , Fishes -- Food , Fishes -- Effect of turbidity on
- Description: The fish community structure of two contrasting estuaries, one with a well developed mangrove forest (Mngazana) and the other without mangroves (Mngazi) was compared. Both the Mngazi and Mngazana estuary fish communities were dominated by marine species, reflecting the importance of these systems as nursery areas for marine fishes. The Mngazi Estuary contained 18% more estuarine fishes in terms of catch per unit effort (CPUE) than the Mngazana Estuary. The reduced tidal influence due to the narrow mouth opening is a possible reason for the heightened CPUE of estuarine species in the Mngazi estuary. The recorded higher diversity of fish species in the Mngazana Estuary when compared with the Mngazi Estuary was attributed to the greater influence of the marine environment due to the wide permanently open mouth, as well as the presence of a variety of habitats in this system. In both estuaries tropical and temperate species were captured, confirming the transitional nature of their biogeographic location which is situated close to the boundary between the subtropical and warm temperate regions of the Southern African coastline. Contrary to previous studies, which recorded seasonal changes in the proportions of tropical and temperate species, the proportions of tropical species remained unchanged at approximately 70% during the January and June sampling occasions. Global warming as a possible reason for the increased dominance of tropical species is discussed. Although several studies in southern Africa have investigated estuarine food web structure, none have compared mangrove and non-mangrove estuaries. In this study, the primary sources of carbon utilised by the fish fauna in the Mngazi and Mngazana estuaries was investigated. The carbon isotopic values of fishes in both estuaries displayed a continuum rather than a tight clustering around particular energy sources. Most detritus feeders of the family Mugilidae (mullets) from both estuaries were relatively more enriched than other fish taxa. The isotopic values of the mullet species suggest a diet derived from relatively enriched carbon sources such as benthic microalgae, the eelgrass Zostera capensis and associated epiphytes. Based on the isotopic values, piscivorous fishes from both estuaries could not be linked to specific prey fish taxa, but clearly the mullet species were not their main food source. The invertebrate feeders that were found in both estuaries showed greater isotopic variations in the Mngazana Estuary than in the Mngazi Estuary, probably reflecting the higher diversity of habitats (carbon sources) and invertebrate prey species in the Mngazana system. Generally the isotopic signatures of fishes from the Mngazi Estuary were more enriched than those from the Mngazana Estuary, thus indicating the possible effect of δ¹³C depleted mangrove derived carbon in the latter system.
- Full Text:
Geographic susceptibility of Helicoverpa armigera (Lepidoptera: Noctuidae) to insecticidal proteins in Bt-cotton in South Africa
- Van Jaarsveld, Martha Johanna
- Authors: Van Jaarsveld, Martha Johanna
- Date: 2004
- Subjects: Helicoverpa armigera , Noctuidae , Lepidoptera , Cotton -- Diseases and pests -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5701 , http://hdl.handle.net/10962/d1005387 , Helicoverpa armigera , Noctuidae , Lepidoptera , Cotton -- Diseases and pests -- South Africa
- Description: Helicoverpa armigera Hübner (Lepidoptera: Noctuidae) (African bollworm) is a typical noctuid with a very catholic taste in food plants and whose larvae feed on a wide range of cultivated and wild plants. It has been identified as the most polyphagous and injurious pest in South Africa. Helicoverpa armigera is also a key pest of cotton in many parts of the world. This key pest requires extensive control as it adversely effects yield and has built up resistance to synthetic pyrethroid insecticides. Cotton is an important crop produced by commercial and small-scale farmers in South Africa. The local demand for cotton has not been exceeded yet, but to satisfy a demanding market, pest control costs play an important role in cotton production. The threat of an insect pest that has already shown resistance prompted the present study to investigate the possibility of resistance to Bt-cotton. Genetically engineered or Bt-cotton was introduced commercially in 1996 in South Africa. All Bt-cotton plants contain one or more foreign genes derived from the soil-dwelling bacterium, Bacillus thuringiensis (Berliner), which produces protein crystals. These crystals were isolated and transferred into the genome of a cotton plant resulting in the plant producing it’s own protein insecticide. In 1998, Monsanto (Pty) Ltd requested research into the geographic susceptibility of H. armigera to the insecticidal proteins in Bt-cotton in SA. Laboratory reared and field sampled populations of H. armigera were exposed to a diet mixed with various baseline concentrations of the Bt-gene Cry1Ac freeze dried protein. This study also determined the performance of H. armigera and Spodoptera littoralis (Boisduval) on different Bt-cotton field cultivars containing different Cry-protein genes. Results obtained indicated a significant difference in susceptibility in two field populations of H. armigera to the Bt-protein Cry1Ac, even though the LD50,s in the 2003 season did not indicate resistance. Bt-cotton cultivar 15985 BX controlled H. armigera and S. littoralis larvae, the best followed in descending order by cultivar 15985 X, 15985 B and DP50 B. Results on H. armigera also indicated that the Cry-proteins in the plant parts of the different cultivars did not diminish as the season progressed. The Bt-cotton cultivars induced retarded growth of larvae, due to either a repellent effect or lack of feeding by larvae. Widespread adoption of Bt-cotton by South African farmers led to regional declines in bollworm populations, reduced insecticide use, and increased yields. Genetically modified crops therefore contribute to a cost effective, sustainable, productive and efficient form of agriculture, with a resultant positive impact on the environment. As the market for commercial Bt-cotton in South Africa expands, it is recommended that a monitoring programme for potential resistant genes in H. armigera should be implemented at least every 2 - 3 years. This will ensure that effective resistance management strategies are utilised. Coupled with this are the Biosafety Risks regarding the effect of new proteins expressed in transgenic plants, which require further studies.
- Full Text:
- Authors: Van Jaarsveld, Martha Johanna
- Date: 2004
- Subjects: Helicoverpa armigera , Noctuidae , Lepidoptera , Cotton -- Diseases and pests -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5701 , http://hdl.handle.net/10962/d1005387 , Helicoverpa armigera , Noctuidae , Lepidoptera , Cotton -- Diseases and pests -- South Africa
- Description: Helicoverpa armigera Hübner (Lepidoptera: Noctuidae) (African bollworm) is a typical noctuid with a very catholic taste in food plants and whose larvae feed on a wide range of cultivated and wild plants. It has been identified as the most polyphagous and injurious pest in South Africa. Helicoverpa armigera is also a key pest of cotton in many parts of the world. This key pest requires extensive control as it adversely effects yield and has built up resistance to synthetic pyrethroid insecticides. Cotton is an important crop produced by commercial and small-scale farmers in South Africa. The local demand for cotton has not been exceeded yet, but to satisfy a demanding market, pest control costs play an important role in cotton production. The threat of an insect pest that has already shown resistance prompted the present study to investigate the possibility of resistance to Bt-cotton. Genetically engineered or Bt-cotton was introduced commercially in 1996 in South Africa. All Bt-cotton plants contain one or more foreign genes derived from the soil-dwelling bacterium, Bacillus thuringiensis (Berliner), which produces protein crystals. These crystals were isolated and transferred into the genome of a cotton plant resulting in the plant producing it’s own protein insecticide. In 1998, Monsanto (Pty) Ltd requested research into the geographic susceptibility of H. armigera to the insecticidal proteins in Bt-cotton in SA. Laboratory reared and field sampled populations of H. armigera were exposed to a diet mixed with various baseline concentrations of the Bt-gene Cry1Ac freeze dried protein. This study also determined the performance of H. armigera and Spodoptera littoralis (Boisduval) on different Bt-cotton field cultivars containing different Cry-protein genes. Results obtained indicated a significant difference in susceptibility in two field populations of H. armigera to the Bt-protein Cry1Ac, even though the LD50,s in the 2003 season did not indicate resistance. Bt-cotton cultivar 15985 BX controlled H. armigera and S. littoralis larvae, the best followed in descending order by cultivar 15985 X, 15985 B and DP50 B. Results on H. armigera also indicated that the Cry-proteins in the plant parts of the different cultivars did not diminish as the season progressed. The Bt-cotton cultivars induced retarded growth of larvae, due to either a repellent effect or lack of feeding by larvae. Widespread adoption of Bt-cotton by South African farmers led to regional declines in bollworm populations, reduced insecticide use, and increased yields. Genetically modified crops therefore contribute to a cost effective, sustainable, productive and efficient form of agriculture, with a resultant positive impact on the environment. As the market for commercial Bt-cotton in South Africa expands, it is recommended that a monitoring programme for potential resistant genes in H. armigera should be implemented at least every 2 - 3 years. This will ensure that effective resistance management strategies are utilised. Coupled with this are the Biosafety Risks regarding the effect of new proteins expressed in transgenic plants, which require further studies.
- Full Text:
Gold exploration northeast of Ngundu Halt, northern marginal zone of the Limpopo Belt, Zimbabwe
- Authors: Simango, Robert Zulu
- Date: 2004 , 2013-05-30
- Subjects: Geology -- Zimbabwe , Gold ores -- Geology -- Zimbabwe , Greenstone belts -- Zimbabwe , Gold mines and mining -- Zimbabwe
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5007 , http://hdl.handle.net/10962/d1005844 , Geology -- Zimbabwe , Gold ores -- Geology -- Zimbabwe , Greenstone belts -- Zimbabwe , Gold mines and mining -- Zimbabwe
- Description: Gold exploration was conducted in northern margin, granulite-facies rocks of the Limpopo Belt. Methods used in the prospecting include drainage, soil and rock geochemistry, geophysical surveys, geological mapping, trenching and diamond drilling. These techniques successfully led to the discovery of two medium size, mesothermal gold deposits (Grid 2s and Grid 4). Objectives of this study were to (a) document the exploration methodology used; (b) describe the regional geology; (c) establish a mineral deposit model; (d) outline the methods and results of various exploration techniques; (e) outline follow-up procedures and evaluation of anomalies; and (f) discuss results of the exploration exercise and conclusions. The granulite-facies terrain comprises Charno-enderbites, mafic and felsic to intermediate metavolcanic rocks and meta-sediments. Renco Mine situated immediately east of the study area, was selected as the ore deposit model for the exploration program. Gold mineralization occurs in shear and thrust zones within an enderbite. The gold deposits are structurally controlled by a first-order, Sinistral transcrustal Mauch Shear Zone, which is parallel to a regional east-northeast penetrative foliation. The deposits are in dilation zones where the Mauch Shear (a) is intersected by a dextral east-west shear (Grid 2s), or (b) has a sinistral splay (Grid 4 and Renco). Close to these deposits, the Mauch Shear is in contact with a "greenstone belt", which is a possible source of crustal metamorphic ore fluids and gold. The Grid 2s deposit contains fine-grained, disseminated free gold, and small amounts of pyrrhotite, pyrite and chalcopyrite in quartz veins within third-order shears in K-feldspar granite. K-feldspar, sericitic, silicic, sulphidation and carbonate alteration characterizes the deposit, which has a proposed mantle-degassing model. The Grid 4 deposit is magmatic porphyry-type, with CuMo and Au in third- and fourth-order shears respectively. Mineralization comprises disseminated to semi-massive pyrrhotite, pyrite, chalcopyrite, sphalerite, bismuth, molybdenite and gold. Wall rock alteration includes biotitic, chloritic, silicic, sulphidation and carbonate. In Grid 2s, Grid 4 and Renco deposits, the alteration mineral assemblages are in three facies, which are granulite, amphibolte and greenschist. In the three deposits, the mineralization occurs with the amphibolite-facies, indicating post-peak, retrograde metamorphic conditions. , Illustrations (maps) only available in print form at Cory Library , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
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- Authors: Simango, Robert Zulu
- Date: 2004 , 2013-05-30
- Subjects: Geology -- Zimbabwe , Gold ores -- Geology -- Zimbabwe , Greenstone belts -- Zimbabwe , Gold mines and mining -- Zimbabwe
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5007 , http://hdl.handle.net/10962/d1005844 , Geology -- Zimbabwe , Gold ores -- Geology -- Zimbabwe , Greenstone belts -- Zimbabwe , Gold mines and mining -- Zimbabwe
- Description: Gold exploration was conducted in northern margin, granulite-facies rocks of the Limpopo Belt. Methods used in the prospecting include drainage, soil and rock geochemistry, geophysical surveys, geological mapping, trenching and diamond drilling. These techniques successfully led to the discovery of two medium size, mesothermal gold deposits (Grid 2s and Grid 4). Objectives of this study were to (a) document the exploration methodology used; (b) describe the regional geology; (c) establish a mineral deposit model; (d) outline the methods and results of various exploration techniques; (e) outline follow-up procedures and evaluation of anomalies; and (f) discuss results of the exploration exercise and conclusions. The granulite-facies terrain comprises Charno-enderbites, mafic and felsic to intermediate metavolcanic rocks and meta-sediments. Renco Mine situated immediately east of the study area, was selected as the ore deposit model for the exploration program. Gold mineralization occurs in shear and thrust zones within an enderbite. The gold deposits are structurally controlled by a first-order, Sinistral transcrustal Mauch Shear Zone, which is parallel to a regional east-northeast penetrative foliation. The deposits are in dilation zones where the Mauch Shear (a) is intersected by a dextral east-west shear (Grid 2s), or (b) has a sinistral splay (Grid 4 and Renco). Close to these deposits, the Mauch Shear is in contact with a "greenstone belt", which is a possible source of crustal metamorphic ore fluids and gold. The Grid 2s deposit contains fine-grained, disseminated free gold, and small amounts of pyrrhotite, pyrite and chalcopyrite in quartz veins within third-order shears in K-feldspar granite. K-feldspar, sericitic, silicic, sulphidation and carbonate alteration characterizes the deposit, which has a proposed mantle-degassing model. The Grid 4 deposit is magmatic porphyry-type, with CuMo and Au in third- and fourth-order shears respectively. Mineralization comprises disseminated to semi-massive pyrrhotite, pyrite, chalcopyrite, sphalerite, bismuth, molybdenite and gold. Wall rock alteration includes biotitic, chloritic, silicic, sulphidation and carbonate. In Grid 2s, Grid 4 and Renco deposits, the alteration mineral assemblages are in three facies, which are granulite, amphibolte and greenschist. In the three deposits, the mineralization occurs with the amphibolite-facies, indicating post-peak, retrograde metamorphic conditions. , Illustrations (maps) only available in print form at Cory Library , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
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Investigation of the larval parasitoids of the false codling moth, Cryptophlebia Leucotreta (Meyrick) (Lepidoptera: Tortricidae), on citrus in South Africa
- Authors: Sishuba, Nomahlubi
- Date: 2004
- Subjects: Cryptophlebia leucotreta , Tortricidae , Cryptophlebia leucotreta -- Control , Pests -- Biological control , Parasitoids , Citrus -- Diseases and pests
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5918 , http://hdl.handle.net/10962/d1016267
- Description: The study examined the larval parasitoids of Cryptophlebia leucotreta (Meyrick) on citrus in South Africa and aimed to improve the existing rearing techniques of C. leucotreta with a view to mass rearing of biological control agents. The biological characteristics of Agathis bishopi Nixon (Hymenoptera: Braconidae) were studied, with an emphasis on parasitism rates in the field, host stage preference, developmental rate, life span and offspring sex ratios. Two larval parasitoids, A. bishopi and Apophua leucotretae (Wilkinson) (Hymenoptera: Ichneumonidae), and an egg parasitoid, Trichogrammatoidea cryptophlebiae Nagaraja (Hymenoptera: Trichogrammatidae), were recorded on C. leucotreta on citrus. A. bishopi was the more abundant of the larval parasitoids and exhibited density dependent parasitism. The highest parasitism rates were observed in December with up to 38% in Sundays River Valley and 34% in Gamtoos River Valley, at a time when the highest false codling moth infestations were observed. Agathis bishopi was recorded only in the Eastern Cape Province. The sex ratio of A. bishopi was biased towards females throughout the study (77% in Gamtoos River Valley and 72% in Sundays River Valley). Agathis bishopi is a solitary, koinobiont, larval-pupal endoparasitoid. The species showed a preference for 1st and 2"d instar hosts. Females regulate the sex of their progeny according to the size and larval stage of the host, ovipositing unfertilised eggs in younger, smaller larvae (1st instars) and fertilised eggs in older, larger larvae (2nd instars). The developmental rate of A. bishopi is in synchrony with that of the moth and adults emerge when adult moths that have escaped parasitism emerge. Agathis bishopi and T. cryptophlebiae compliment each other because they have different niches and strategies of attack. Integrating A. bishopi and T. cryptophlebiae into the management of citrus orchards has potential to suppress false codling moth. Larger rearing containers seemed ideal for large-scale rearing of false codling moth. A higher percentage of adults was obtained from larvae reared in larger containers than in smaller ones. The width of the sponges used as stoppers prevented escape of the larvae. Media prepared in larger containers are easier and simpler to prepare than in smaller ones, thus eliminating many precautions otherwise necessary to prevent contamination. Moth production was greatly reduced by the high concentration of Sporekill used for egg decontamination.
- Full Text:
- Authors: Sishuba, Nomahlubi
- Date: 2004
- Subjects: Cryptophlebia leucotreta , Tortricidae , Cryptophlebia leucotreta -- Control , Pests -- Biological control , Parasitoids , Citrus -- Diseases and pests
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5918 , http://hdl.handle.net/10962/d1016267
- Description: The study examined the larval parasitoids of Cryptophlebia leucotreta (Meyrick) on citrus in South Africa and aimed to improve the existing rearing techniques of C. leucotreta with a view to mass rearing of biological control agents. The biological characteristics of Agathis bishopi Nixon (Hymenoptera: Braconidae) were studied, with an emphasis on parasitism rates in the field, host stage preference, developmental rate, life span and offspring sex ratios. Two larval parasitoids, A. bishopi and Apophua leucotretae (Wilkinson) (Hymenoptera: Ichneumonidae), and an egg parasitoid, Trichogrammatoidea cryptophlebiae Nagaraja (Hymenoptera: Trichogrammatidae), were recorded on C. leucotreta on citrus. A. bishopi was the more abundant of the larval parasitoids and exhibited density dependent parasitism. The highest parasitism rates were observed in December with up to 38% in Sundays River Valley and 34% in Gamtoos River Valley, at a time when the highest false codling moth infestations were observed. Agathis bishopi was recorded only in the Eastern Cape Province. The sex ratio of A. bishopi was biased towards females throughout the study (77% in Gamtoos River Valley and 72% in Sundays River Valley). Agathis bishopi is a solitary, koinobiont, larval-pupal endoparasitoid. The species showed a preference for 1st and 2"d instar hosts. Females regulate the sex of their progeny according to the size and larval stage of the host, ovipositing unfertilised eggs in younger, smaller larvae (1st instars) and fertilised eggs in older, larger larvae (2nd instars). The developmental rate of A. bishopi is in synchrony with that of the moth and adults emerge when adult moths that have escaped parasitism emerge. Agathis bishopi and T. cryptophlebiae compliment each other because they have different niches and strategies of attack. Integrating A. bishopi and T. cryptophlebiae into the management of citrus orchards has potential to suppress false codling moth. Larger rearing containers seemed ideal for large-scale rearing of false codling moth. A higher percentage of adults was obtained from larvae reared in larger containers than in smaller ones. The width of the sponges used as stoppers prevented escape of the larvae. Media prepared in larger containers are easier and simpler to prepare than in smaller ones, thus eliminating many precautions otherwise necessary to prevent contamination. Moth production was greatly reduced by the high concentration of Sporekill used for egg decontamination.
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