Biotic and abiotic drivers of macroinvertebrate assemblages in a South African river
- Authors: Bellingan, Terence Andrew
- Date: 2018
- Subjects: Aquatic insects -- South Africa -- Eastern Cape , Stream ecology -- South Africa -- Eastern Cape , Freshwater ecology -- South Africa -- Eastern Cape , Riparian areas -- Management , Ecosystem management -- South Africa -- Eastern Cape , Mayflies -- South Africa -- Eastern Cape , Stoneflies -- South Africa -- Eastern Cape , Keiskamma River
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/61839 , vital:28067
- Description: Aquatic insects are the most numerically abundant and diverse group of organisms found in lotic ecosystems in South Africa and the world over. They play vital roles in freshwater ecosystem functioning, processing nutrients and in turn forming integral links in stream food-webs. This thesis focussed on examining the macroinvertebrate fauna within three reaches of headwater streams of the Keiskamma River system: reaches that were considered to be fishless; reaches that were invaded by non-native salmonid species; and reaches that were dominated by native fish. I described the effects of predatory fish presence through detailed examination of macroinvertebrate assemblage composition; macroinvertebrate drift timing and density; and through niche utilisation determined from stable isotope data. Patterns in the macroinvertebrate assemblages of the headwaters of the Keiskamma River appear to be driven more strongly by flow rate and seasonal influences, but fish presence and biotope availability were also significant drivers. Niche shifts due to predator presence were not easy to detect and, while patterns of influence may have been evident, they were not found to be significant. However, I demonstrated that salmonids selectively feed on native fish species when the opportunity is presented, occupying significantly higher trophic levels when co-occurring with native fish than in invaded reaches where native fish are absent. Drift timing and density were demonstrated to be significantly different between reach for specific macroinvertebrate species from the Ephemeroptera and Plecoptera, under differing fish predation regimes, in agreement with what has been observed from studies in rivers elsewhere. In freshwater ecosystems of South Africa and worldwide, mitigation of negative effects of alien fishes through their removal using piscicides may also affect non-target organisms. To better understand the effects of just such a removal operation, employed for the first time in the history of freshwater conservation in South Africa, macroinvertebrate communities were assessed for non-target effects of rotenone. The fish eradication operations were demonstrated to have a short-term negative effect on the macroinvertebrate assemblage, through water quality index measurements and alteration of densities of macroinvertebrate taxa collected from stone surfaces. However, no long-term detrimental impact was observed as macroinvertebrate faunas returned to a comparable pre-treatment state within a year of each rotenone application.
- Full Text:
- Authors: Bellingan, Terence Andrew
- Date: 2018
- Subjects: Aquatic insects -- South Africa -- Eastern Cape , Stream ecology -- South Africa -- Eastern Cape , Freshwater ecology -- South Africa -- Eastern Cape , Riparian areas -- Management , Ecosystem management -- South Africa -- Eastern Cape , Mayflies -- South Africa -- Eastern Cape , Stoneflies -- South Africa -- Eastern Cape , Keiskamma River
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/61839 , vital:28067
- Description: Aquatic insects are the most numerically abundant and diverse group of organisms found in lotic ecosystems in South Africa and the world over. They play vital roles in freshwater ecosystem functioning, processing nutrients and in turn forming integral links in stream food-webs. This thesis focussed on examining the macroinvertebrate fauna within three reaches of headwater streams of the Keiskamma River system: reaches that were considered to be fishless; reaches that were invaded by non-native salmonid species; and reaches that were dominated by native fish. I described the effects of predatory fish presence through detailed examination of macroinvertebrate assemblage composition; macroinvertebrate drift timing and density; and through niche utilisation determined from stable isotope data. Patterns in the macroinvertebrate assemblages of the headwaters of the Keiskamma River appear to be driven more strongly by flow rate and seasonal influences, but fish presence and biotope availability were also significant drivers. Niche shifts due to predator presence were not easy to detect and, while patterns of influence may have been evident, they were not found to be significant. However, I demonstrated that salmonids selectively feed on native fish species when the opportunity is presented, occupying significantly higher trophic levels when co-occurring with native fish than in invaded reaches where native fish are absent. Drift timing and density were demonstrated to be significantly different between reach for specific macroinvertebrate species from the Ephemeroptera and Plecoptera, under differing fish predation regimes, in agreement with what has been observed from studies in rivers elsewhere. In freshwater ecosystems of South Africa and worldwide, mitigation of negative effects of alien fishes through their removal using piscicides may also affect non-target organisms. To better understand the effects of just such a removal operation, employed for the first time in the history of freshwater conservation in South Africa, macroinvertebrate communities were assessed for non-target effects of rotenone. The fish eradication operations were demonstrated to have a short-term negative effect on the macroinvertebrate assemblage, through water quality index measurements and alteration of densities of macroinvertebrate taxa collected from stone surfaces. However, no long-term detrimental impact was observed as macroinvertebrate faunas returned to a comparable pre-treatment state within a year of each rotenone application.
- Full Text:
Using action cameras to assess habitat use by Pseudobarbus afer and Sandelia capensis in the Swartkops River, Eastern Cape, South Africa
- Authors: Hannweg, Bianca
- Date: 2018
- Subjects: Freshwater biodiversity -- South Africa -- Eastern Cape , Freshwater biodiversity conservation -- South Africa -- Eastern Cape , Freshwater ecology -- South Africa -- Eastern Cape , Freshwater fishes -- South Africa -- Eastern Cape , Freshwater fishes -- Behavior -- South Africa -- Eastern Cape , Freshwater fishes -- Habitat -- South Africa -- Eastern Cape , Underwater videography , Anabantidae -- South Africa -- Eastern Cape , Cyprinidae -- South Africa -- Eastern Cape , Pseudobarbus afer , Sandelia capensis
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62039 , vital:28098
- Description: Currently, freshwater systems are facing various threats, freshwater biota are declining and there is an increased need to monitor freshwater fauna and flora using non-invasive methods. This thesis aimed to evaluate the potential of using action cameras as a tool for the monitoring of freshwater fish populations and the collection of habitat utilisation data. This evaluation was conducted in headwater tributaries of the Swartkops River in South Africa, using two threatened species that have not been extensively studied, Pseudobarbus afer (Peters, 1864) and Sandelia capensis (Cuvier, 1831). The aims of this study were to: (1) assess the use of underwater video analysis (UWVA) using action cameras (videos and still photographs) in comparison to estimates derived from snorkel surveys, to estimate the abundance of P. afer in headwater streams; (2) use estimates derived from UWVA (videos and photographs) to assess the habitat use of two imperilled species, P. afer and S. capensis; and (3) assess habitat use by these two species in the presence of an artificial habitat. This work demonstrated that: (1) estimates derived from videos and photographs were strongly correlated to estimates derived from snorkel surveys, provided multiple cameras were used; (2) estimates derived from videos and photographs were not significantly different to estimates derived from snorkel surveys; (3) a filming period of 15 minutes was sufficient at detecting 0.9 of the cumulative mMaxN (mean MaxN) within one of the five habitats; and (4) still photographs, which are less time consuming to process than videos, could be used in preference to videos. Based on these findings, techniques using action cameras to assess habitat utilisation and behaviour in situ of the two-focal species, were developed using six habitat types (inflow, outflow, woody debris, fern root, middle and artificial) in four pools. It was demonstrated that: (1) there was a significant difference in proportional occupancies across habitats for both P. afer and S. capensis; (2) Pseudobarbus afer were mainly observed schooling in the middle of the pool and feeding on detritus material in fern root, woody debris and off the artificial structure; and (3) Sandelia capensis rapidly colonised the artificial structure and were observed utilising it for refuge. In conclusion, this work demonstrated that still photographs from action cameras can be used in place of videos to estimate the abundance of freshwater fishes and assess their habitat use and behaviour in clear headwater streams. This work also demonstrated how action cameras could be used to evaluate the effect of the introduction of artificial habitat as a restoration measure for headwater fish communities.
- Full Text:
- Authors: Hannweg, Bianca
- Date: 2018
- Subjects: Freshwater biodiversity -- South Africa -- Eastern Cape , Freshwater biodiversity conservation -- South Africa -- Eastern Cape , Freshwater ecology -- South Africa -- Eastern Cape , Freshwater fishes -- South Africa -- Eastern Cape , Freshwater fishes -- Behavior -- South Africa -- Eastern Cape , Freshwater fishes -- Habitat -- South Africa -- Eastern Cape , Underwater videography , Anabantidae -- South Africa -- Eastern Cape , Cyprinidae -- South Africa -- Eastern Cape , Pseudobarbus afer , Sandelia capensis
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62039 , vital:28098
- Description: Currently, freshwater systems are facing various threats, freshwater biota are declining and there is an increased need to monitor freshwater fauna and flora using non-invasive methods. This thesis aimed to evaluate the potential of using action cameras as a tool for the monitoring of freshwater fish populations and the collection of habitat utilisation data. This evaluation was conducted in headwater tributaries of the Swartkops River in South Africa, using two threatened species that have not been extensively studied, Pseudobarbus afer (Peters, 1864) and Sandelia capensis (Cuvier, 1831). The aims of this study were to: (1) assess the use of underwater video analysis (UWVA) using action cameras (videos and still photographs) in comparison to estimates derived from snorkel surveys, to estimate the abundance of P. afer in headwater streams; (2) use estimates derived from UWVA (videos and photographs) to assess the habitat use of two imperilled species, P. afer and S. capensis; and (3) assess habitat use by these two species in the presence of an artificial habitat. This work demonstrated that: (1) estimates derived from videos and photographs were strongly correlated to estimates derived from snorkel surveys, provided multiple cameras were used; (2) estimates derived from videos and photographs were not significantly different to estimates derived from snorkel surveys; (3) a filming period of 15 minutes was sufficient at detecting 0.9 of the cumulative mMaxN (mean MaxN) within one of the five habitats; and (4) still photographs, which are less time consuming to process than videos, could be used in preference to videos. Based on these findings, techniques using action cameras to assess habitat utilisation and behaviour in situ of the two-focal species, were developed using six habitat types (inflow, outflow, woody debris, fern root, middle and artificial) in four pools. It was demonstrated that: (1) there was a significant difference in proportional occupancies across habitats for both P. afer and S. capensis; (2) Pseudobarbus afer were mainly observed schooling in the middle of the pool and feeding on detritus material in fern root, woody debris and off the artificial structure; and (3) Sandelia capensis rapidly colonised the artificial structure and were observed utilising it for refuge. In conclusion, this work demonstrated that still photographs from action cameras can be used in place of videos to estimate the abundance of freshwater fishes and assess their habitat use and behaviour in clear headwater streams. This work also demonstrated how action cameras could be used to evaluate the effect of the introduction of artificial habitat as a restoration measure for headwater fish communities.
- Full Text:
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