Age of squid Loligo reynaudii d’Orbigny, 1845, and its possible use to test effectiveness of the closed season in protecting this resource
- Mwanangombe, Collette Habani
- Authors: Mwanangombe, Collette Habani
- Date: 2020
- Subjects: Loliginidae -- Spawning -- South Africa , Loliginidae -- Age determination , Loligo fisheries -- South Africa , Fishery management -- South Africa , Otoliths , Loliginidae – Eggs -- Incubation , Loliginidae – Growth , Fish stock assessment -- South Africa , Recruitment (Population biology) -- South Africa , Loligo reynaudii d’Orbigny
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/144333 , vital:38336
- Description: This study presents age distributions representing populations of adult Loligo reynaudii, together with the results of spawning and commercial catches to assist in understanding the beneficial role of the closed season. The results were based on 791 samples collected during three closed seasons (November: 2003, 2004 and 2005) and out of closed season during April/May 2005. Age and predicted growth were examined by counting daily rings on statolith microstructures. The age in days after hatching ranged from 168 to 484 days (71-425 mm) in males and from 125 to 478 days (83-263 mm) in females. Average age at spawning was found to be 323 days in males and 316 days in females. Population estimates of growth rates were best described by a linear growth model which revealed that males grew faster than females in length as they grew older with growth rate ranging between 0.63 to 0.83 mm per day for males and between 0.22 to 0.32 mm per day for females. Back-calculated hatch dates and later egg-laying events for parental populations were determined. Results from back calculated egg laying dates (presented as percentage of frequency of all laying dates) indicated a highest total of 36%, 39% and 15% of eggs from all samples were laid during the closed season and nine days after the closed season during year 2003, 2004 and 2005 respectively. Monthly commercial total catches (2002-2005) showed an increase from November soon after the fishery resumed, up until the month of January. Daily catches were highest in November (up to 290 tonnes) relative to the daily catches observed in December and January in all the years. Results led to the conclusion that the closed season (25 October to 22 November) is beneficial for both the chokka resource and the fishery. This is because: a) there is time for enough spawning biomass to accumulate, which subsequently results in high catches (good fishery), in the current year, best immediately after season opens in November; b) there is a link in the results between egg laying dates in the period of closed season and immediately afterwards, and the magnitude of catches in last nine days of November.
- Full Text:
- Authors: Mwanangombe, Collette Habani
- Date: 2020
- Subjects: Loliginidae -- Spawning -- South Africa , Loliginidae -- Age determination , Loligo fisheries -- South Africa , Fishery management -- South Africa , Otoliths , Loliginidae – Eggs -- Incubation , Loliginidae – Growth , Fish stock assessment -- South Africa , Recruitment (Population biology) -- South Africa , Loligo reynaudii d’Orbigny
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/144333 , vital:38336
- Description: This study presents age distributions representing populations of adult Loligo reynaudii, together with the results of spawning and commercial catches to assist in understanding the beneficial role of the closed season. The results were based on 791 samples collected during three closed seasons (November: 2003, 2004 and 2005) and out of closed season during April/May 2005. Age and predicted growth were examined by counting daily rings on statolith microstructures. The age in days after hatching ranged from 168 to 484 days (71-425 mm) in males and from 125 to 478 days (83-263 mm) in females. Average age at spawning was found to be 323 days in males and 316 days in females. Population estimates of growth rates were best described by a linear growth model which revealed that males grew faster than females in length as they grew older with growth rate ranging between 0.63 to 0.83 mm per day for males and between 0.22 to 0.32 mm per day for females. Back-calculated hatch dates and later egg-laying events for parental populations were determined. Results from back calculated egg laying dates (presented as percentage of frequency of all laying dates) indicated a highest total of 36%, 39% and 15% of eggs from all samples were laid during the closed season and nine days after the closed season during year 2003, 2004 and 2005 respectively. Monthly commercial total catches (2002-2005) showed an increase from November soon after the fishery resumed, up until the month of January. Daily catches were highest in November (up to 290 tonnes) relative to the daily catches observed in December and January in all the years. Results led to the conclusion that the closed season (25 October to 22 November) is beneficial for both the chokka resource and the fishery. This is because: a) there is time for enough spawning biomass to accumulate, which subsequently results in high catches (good fishery), in the current year, best immediately after season opens in November; b) there is a link in the results between egg laying dates in the period of closed season and immediately afterwards, and the magnitude of catches in last nine days of November.
- Full Text:
Population genomics analysis of yellowfin tuna Thunnus albacares off South Africa reveals need for a shifted management boundary
- Authors: Mullins, Rachel Brenna
- Date: 2017
- Subjects: Yellowfin tuna fisheries -- South Africa -- Western Cape , Genomics , Tuna fisheries -- South Africa , Fishery management -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/57819 , vital:26992
- Description: Yellowfin tuna Thunnus albacares is a commercially and economically important fisheries species, which comprises the second largest component of South Africa’s catch of tuna and tuna-like species. Catches of the species off South Africa are treated as two discrete stocks by the two tuna Regional Fisheries Management Organisations (tRFMOs) under whose jurisdictions they fall. Individuals caught off the Western Cape, west of the boundary between the tRFMOs at 20°E, are included in assessment and management of the Atlantic Ocean yellowfin tuna stock by the International Commission for the Conservation of Atlantic Tunas (ICCAT), and those caught east of this boundary are assessed and managed as part of the Indian Ocean stock by the Indian Ocean Tuna Commission (IOTC). The boundary between these stocks is based on the confluence of the two oceans in this region and does not incorporate the population structure of species. For sustainable exploitation of fisheries resources, it is important that the definition of management stocks reflects species’ biological population structure; the fine-scale stock structure of yellowfin tuna off South Africa is therefore a research priority which this study aimed to address by means of population genomics analyses. Yellowfin tuna exhibit shallow genetic differentiation over wide geographic areas, and as such traditional population genetic approaches have limited power in resolving fishery significant population structure in the species. Herein, a population genomic approach was employed, specifically, genome-wide analysis of single nucleotide polymorphisms (SNPs) discovered using a next-generation DNA sequencing approach, to confer (i) increased statistical power to detect neutral structuring reflecting population connectivity patterns and (ii) signatures of local adaptation. The mitochondrial Control Region (mtDNA CR) was also sequenced to compare the resolving power of different approaches and to permit coalescent based analyses of the species evolutionary history in the region. Neutral SNP loci revealed significant structure within the dataset (Fst=0.0043; P<0.0001); partitioning of this differentiation within the dataset indicated significant differentiation between yellowfin tuna from the Western Cape and the Gulf of Guinea in the eastern Atlantic Ocean, with no significant differentiation between individuals from the Western Cape and Western Indian Ocean regions. This indicates two population units wherein there is a separation of the Gulf of Guinea from the remaining samples (Indian Ocean including Western Cape) that are largely derived from a single genetic population. This pattern was also supported by assignment tests. Positive outlier SNPs, exhibiting signatures of diversifying selection, suggest that individuals from these regions may be locally adapted, as well as demographically isolated. The mtDNA CR did not reveal any significant genetic structure among samples (Fst=0.0030; P=0.309), demonstrating the increased resolving power provided by population genomics approaches, but revealed signatures of historical demographic fluctuations associated with glacial cycles. Based on the findings of this study, it is suggested that yellowfin tuna caught off the Western Cape of South Africa are migrants from the Indian Ocean population, exhibiting significant genetic differentiation from the Atlantic Ocean Gulf of Guinea individuals, and should thus be included in the assessment and management of the Indian Ocean stock. It is therefore recommended that the boundary between the Atlantic and Indian Ocean yellowfin tuna stocks, under the mandates of ICCAT and the IOTC respectively, should be shifted to approximately 13.35°E to include all individuals caught in South African waters in the Indian Ocean stock.
- Full Text:
- Authors: Mullins, Rachel Brenna
- Date: 2017
- Subjects: Yellowfin tuna fisheries -- South Africa -- Western Cape , Genomics , Tuna fisheries -- South Africa , Fishery management -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/57819 , vital:26992
- Description: Yellowfin tuna Thunnus albacares is a commercially and economically important fisheries species, which comprises the second largest component of South Africa’s catch of tuna and tuna-like species. Catches of the species off South Africa are treated as two discrete stocks by the two tuna Regional Fisheries Management Organisations (tRFMOs) under whose jurisdictions they fall. Individuals caught off the Western Cape, west of the boundary between the tRFMOs at 20°E, are included in assessment and management of the Atlantic Ocean yellowfin tuna stock by the International Commission for the Conservation of Atlantic Tunas (ICCAT), and those caught east of this boundary are assessed and managed as part of the Indian Ocean stock by the Indian Ocean Tuna Commission (IOTC). The boundary between these stocks is based on the confluence of the two oceans in this region and does not incorporate the population structure of species. For sustainable exploitation of fisheries resources, it is important that the definition of management stocks reflects species’ biological population structure; the fine-scale stock structure of yellowfin tuna off South Africa is therefore a research priority which this study aimed to address by means of population genomics analyses. Yellowfin tuna exhibit shallow genetic differentiation over wide geographic areas, and as such traditional population genetic approaches have limited power in resolving fishery significant population structure in the species. Herein, a population genomic approach was employed, specifically, genome-wide analysis of single nucleotide polymorphisms (SNPs) discovered using a next-generation DNA sequencing approach, to confer (i) increased statistical power to detect neutral structuring reflecting population connectivity patterns and (ii) signatures of local adaptation. The mitochondrial Control Region (mtDNA CR) was also sequenced to compare the resolving power of different approaches and to permit coalescent based analyses of the species evolutionary history in the region. Neutral SNP loci revealed significant structure within the dataset (Fst=0.0043; P<0.0001); partitioning of this differentiation within the dataset indicated significant differentiation between yellowfin tuna from the Western Cape and the Gulf of Guinea in the eastern Atlantic Ocean, with no significant differentiation between individuals from the Western Cape and Western Indian Ocean regions. This indicates two population units wherein there is a separation of the Gulf of Guinea from the remaining samples (Indian Ocean including Western Cape) that are largely derived from a single genetic population. This pattern was also supported by assignment tests. Positive outlier SNPs, exhibiting signatures of diversifying selection, suggest that individuals from these regions may be locally adapted, as well as demographically isolated. The mtDNA CR did not reveal any significant genetic structure among samples (Fst=0.0030; P=0.309), demonstrating the increased resolving power provided by population genomics approaches, but revealed signatures of historical demographic fluctuations associated with glacial cycles. Based on the findings of this study, it is suggested that yellowfin tuna caught off the Western Cape of South Africa are migrants from the Indian Ocean population, exhibiting significant genetic differentiation from the Atlantic Ocean Gulf of Guinea individuals, and should thus be included in the assessment and management of the Indian Ocean stock. It is therefore recommended that the boundary between the Atlantic and Indian Ocean yellowfin tuna stocks, under the mandates of ICCAT and the IOTC respectively, should be shifted to approximately 13.35°E to include all individuals caught in South African waters in the Indian Ocean stock.
- Full Text:
Progress in implementing the ecosystem approach to fisheries in South Africa in principle and in practice
- Duna, Elethu Zamandlane Lona
- Authors: Duna, Elethu Zamandlane Lona
- Date: 2017
- Subjects: Fisheries -- Environmental aspects -- South Africa , Sustainable fisheries -- South Africa , Fishery management -- South Africa , South African Sustainable Seafood Initiative
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/44879 , vital:25449
- Description: Over the last century, the population of the world has more than doubled, resulting in an increase in seafood consumption (FAO 2010), and placing strain on fisheries wild stocks, their habitats, and the coastal communities that rely on them for food and survival. The ecosystem approach to fisheries (EAF) differs from other management approaches by combining all aspects of ecosystem management, and strives to conserve ecosystem structure, maintain diversity, productivity, and integrity, and to meet human food and economic needs. This study aims to assess how South Africa is progressing in implementing EAF in principle and in practice, to identify challenges, and suggest solutions, where appropriate. The law sets precedence on governance. An assessment of the Marine Living Resources Act, (MLRA) and the South African Policy for Small-scale Fisheries (SSFP) revealed that, although these instruments recognise and contain elements of EAF, this management approach has not been adequately implemented. In practice, the status of implementation of EAF was assessed through the Southern African Sustainable Seafood Initiative (SASSI) and the Ecological Risk Assessments (ERA). The scores of 65 assessments, conducted in 2013 and 2014, were obtained from SASSI. Of the 65 species assessed; 18.4% were listed as Green, 50.8% were listed as Orange and 30.8% were listed as Red. Two methods were used to analyse the data; non-metric multidimensional scaling (NMDS), and cluster analysis in the statistical program R. Analysis of the SASSI assessments indicates that there has been progress in implementing EAF since the World Summit on Sustainable Development in 2002. The high number of Orange and Red listed species however, indicate that major sustainability issues still exist. Species in commercially important fisheries enjoy the bulk of research and management attention compared to other species, including bycatch species, as reflected by a high proportion of Green-rated commercially important species. Based on these results, four fisheries were chosen for further indepth analysis using additional information found in ecological risk assessments: offshore demersal trawl, inshore demersal trawl, West Coast rock lobster fishery and the line fishery. The documents and published literature of the Department of Agriculture, Forestry and Fisheries Internal Scientific Working Groups provided further information. A Wilcoxon signed rank test conducted in the programme R on the results of the ERAs showed that there was a decline in implementation of EAF and reinforced the earlier conclusion that large commercial fisheries, offshore and inshore demersal trawl, were progressing in implementing EAF faster than West Coast rock lobster and line fisheries, which are examples of smaller-scale fisheries that are more accessible to many resource users. Both progress and challenges appeared to be largely influenced by several common factors, which include the presence or absence of positive incentives, co-management, management plans, access, compliance, economic importance, capacity, and the interests of rights holders and other stakeholders.
- Full Text:
- Authors: Duna, Elethu Zamandlane Lona
- Date: 2017
- Subjects: Fisheries -- Environmental aspects -- South Africa , Sustainable fisheries -- South Africa , Fishery management -- South Africa , South African Sustainable Seafood Initiative
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/44879 , vital:25449
- Description: Over the last century, the population of the world has more than doubled, resulting in an increase in seafood consumption (FAO 2010), and placing strain on fisheries wild stocks, their habitats, and the coastal communities that rely on them for food and survival. The ecosystem approach to fisheries (EAF) differs from other management approaches by combining all aspects of ecosystem management, and strives to conserve ecosystem structure, maintain diversity, productivity, and integrity, and to meet human food and economic needs. This study aims to assess how South Africa is progressing in implementing EAF in principle and in practice, to identify challenges, and suggest solutions, where appropriate. The law sets precedence on governance. An assessment of the Marine Living Resources Act, (MLRA) and the South African Policy for Small-scale Fisheries (SSFP) revealed that, although these instruments recognise and contain elements of EAF, this management approach has not been adequately implemented. In practice, the status of implementation of EAF was assessed through the Southern African Sustainable Seafood Initiative (SASSI) and the Ecological Risk Assessments (ERA). The scores of 65 assessments, conducted in 2013 and 2014, were obtained from SASSI. Of the 65 species assessed; 18.4% were listed as Green, 50.8% were listed as Orange and 30.8% were listed as Red. Two methods were used to analyse the data; non-metric multidimensional scaling (NMDS), and cluster analysis in the statistical program R. Analysis of the SASSI assessments indicates that there has been progress in implementing EAF since the World Summit on Sustainable Development in 2002. The high number of Orange and Red listed species however, indicate that major sustainability issues still exist. Species in commercially important fisheries enjoy the bulk of research and management attention compared to other species, including bycatch species, as reflected by a high proportion of Green-rated commercially important species. Based on these results, four fisheries were chosen for further indepth analysis using additional information found in ecological risk assessments: offshore demersal trawl, inshore demersal trawl, West Coast rock lobster fishery and the line fishery. The documents and published literature of the Department of Agriculture, Forestry and Fisheries Internal Scientific Working Groups provided further information. A Wilcoxon signed rank test conducted in the programme R on the results of the ERAs showed that there was a decline in implementation of EAF and reinforced the earlier conclusion that large commercial fisheries, offshore and inshore demersal trawl, were progressing in implementing EAF faster than West Coast rock lobster and line fisheries, which are examples of smaller-scale fisheries that are more accessible to many resource users. Both progress and challenges appeared to be largely influenced by several common factors, which include the presence or absence of positive incentives, co-management, management plans, access, compliance, economic importance, capacity, and the interests of rights holders and other stakeholders.
- Full Text:
An assessment of inland fisheries in South Africa using fisheries-dependent and fisheries-independent data sources
- Authors: McCafferty, James Ross
- Date: 2012
- Subjects: Fisheries -- South Africa , Fishery management -- South Africa , Fisheries -- Economic aspects -- South Africa , Food security -- South Africa , Poverty -- South Africa , Economic development -- South Africa , Fishing -- South Africa , Fisheries -- Catch effort -- South Africa , Fish stock assessment -- South Africa , Fish populations -- South Africa , Linear models (Statistics)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5229 , http://hdl.handle.net/10962/d1005072 , Fisheries -- South Africa , Fishery management -- South Africa , Fisheries -- Economic aspects -- South Africa , Food security -- South Africa , Poverty -- South Africa , Economic development -- South Africa , Fishing -- South Africa , Fisheries -- Catch effort -- South Africa , Fish stock assessment -- South Africa , Fish populations -- South Africa , Linear models (Statistics)
- Description: The role of inland fisheries as contributors to local and national economies in developing African countries is well documented. In South Africa, there is increasing interest in inland fisheries as vehicles for achieving national policy objectives including food security, livelihoods provision, poverty alleviation and economic development but there is surprisingly little literature on the history, current status, and potential of inland fishery resources. This lack of knowledge constrains the development of management strategies for ensuring the biological sustainability of these resources and the economic and social sustainability of the people that are dependent on them. In order to contribute to the knowledge base of inland fisheries in South Africa this thesis: (1) presents an exhaustive review of the available literature on inland fisheries in South Africa; (2) describes the organisation of recreational anglers (the primary users of the resource); (3) compiles recreational angling catch records and scientific gill net survey data, and assesses the applicability of these data for providing estimates of fish abundance (catch-per-unit effort [CPUE]); and finally, (4) determines the potential for models of fish abundance using morphometric, edaphic, and climatic factors. The literature review highlighted the data-poor nature of South African inland fisheries. In particular information on harvest rates was lacking. A lack of knowledge regarding different inland fishery sectors, governance systems, and potential user conflicts was also found. Recreational anglers were identified as the dominant user group and catch data from this sector were identified as potential sources of fish abundance and harvest information. Formal freshwater recreational angling in South Africa is a highly organised, multi-faceted activity which is based primarily on angling for non-native species, particularly common carp Cyprinus carpio and largemouth bass Micropterus salmoides. Bank anglers constituted the largest number of formal participants (5 309 anglers affiliated to formal angling organisations) followed by bass anglers (1 184 anglers affiliated to formal angling organisations). The highly structured nature of organised recreational angling and dominant utilisation of inland fisheries resources by this sector illustrated not only the vested interest of anglers in the management and development of inland fisheries but also the role that anglers may play in future decision-making and monitoring through the dissemination of catch data from organised angling events. Generalised linear models (GLMs) and generalised additive models (GAMs) were used to standardise CPUE estimates from bass- and bank angling catch records, which provided the most suitable data, and to determine environmental variables which most influenced capture probabilities and CPUE. Capture probabilities and CPUE for bass were influenced primarily by altitude and conductivity and multiple regression analysis revealed that predictive models incorporating altitude, conductivity, surface area and capacity explained significant (p<0.05) amounts of variability in CPUE (53%), probability of capture (49%) and probability of limit bag (74%). Bank angling CPUE was influenced by conductivity, surface area and rainfall although an insignificant (p>0.05) amount of variability (63%) was explained by a predictive model incorporating these variables as investigations were constrained by small sample sizes and aggregated catch information. Scientific survey data provided multi-species information and highlighted the high proportion of non-native fish species in Eastern Cape impoundments. Gillnet catches were influenced primarily by species composition and were less subject to fluctuations induced by environmental factors. Overall standardised gillnet CPUE was influenced by surface area, conductivity and age of impoundment. Although the model fit was not significant at the p<0.05 level, 23% of the variability in the data was explained by a predictive model incorporating these variables. The presence of species which could be effectively targeted by gillnets was hypothesised to represent the most important factor influencing catch rates. Investigation of factors influencing CPUE in impoundments dominated by Clarias gariepinus and native cyprinids indicated that warmer, younger impoundments and smaller, colder impoundments produced higher catches of C. gariepinus and native cyprinids respectively. A predictive model for C. gariepinus abundance explained a significant amount of variability (77%) in CPUE although the small sample size of impoundments suggests that predictions from this model may not be robust. CPUE of native cyprinids was influenced primarily by the presence of Labeo umbratus and constrained by small sample size of impoundments and the model did not adequately explain the variability in the data (r² = 0.31, p>0.05). These results indicate that angling catch- and scientific survey data can be useful in providing predictions of fish abundance that are biologically realistic. However, more data over a greater spatial scale would allow for more robust predictions of catch rates. This could be achieved through increased monitoring of existing resource users, the creation of a centralised database for catch records from angling competitions, and increased scientific surveys of South African impoundments conducted by a dedicated governmental function.
- Full Text:
- Authors: McCafferty, James Ross
- Date: 2012
- Subjects: Fisheries -- South Africa , Fishery management -- South Africa , Fisheries -- Economic aspects -- South Africa , Food security -- South Africa , Poverty -- South Africa , Economic development -- South Africa , Fishing -- South Africa , Fisheries -- Catch effort -- South Africa , Fish stock assessment -- South Africa , Fish populations -- South Africa , Linear models (Statistics)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5229 , http://hdl.handle.net/10962/d1005072 , Fisheries -- South Africa , Fishery management -- South Africa , Fisheries -- Economic aspects -- South Africa , Food security -- South Africa , Poverty -- South Africa , Economic development -- South Africa , Fishing -- South Africa , Fisheries -- Catch effort -- South Africa , Fish stock assessment -- South Africa , Fish populations -- South Africa , Linear models (Statistics)
- Description: The role of inland fisheries as contributors to local and national economies in developing African countries is well documented. In South Africa, there is increasing interest in inland fisheries as vehicles for achieving national policy objectives including food security, livelihoods provision, poverty alleviation and economic development but there is surprisingly little literature on the history, current status, and potential of inland fishery resources. This lack of knowledge constrains the development of management strategies for ensuring the biological sustainability of these resources and the economic and social sustainability of the people that are dependent on them. In order to contribute to the knowledge base of inland fisheries in South Africa this thesis: (1) presents an exhaustive review of the available literature on inland fisheries in South Africa; (2) describes the organisation of recreational anglers (the primary users of the resource); (3) compiles recreational angling catch records and scientific gill net survey data, and assesses the applicability of these data for providing estimates of fish abundance (catch-per-unit effort [CPUE]); and finally, (4) determines the potential for models of fish abundance using morphometric, edaphic, and climatic factors. The literature review highlighted the data-poor nature of South African inland fisheries. In particular information on harvest rates was lacking. A lack of knowledge regarding different inland fishery sectors, governance systems, and potential user conflicts was also found. Recreational anglers were identified as the dominant user group and catch data from this sector were identified as potential sources of fish abundance and harvest information. Formal freshwater recreational angling in South Africa is a highly organised, multi-faceted activity which is based primarily on angling for non-native species, particularly common carp Cyprinus carpio and largemouth bass Micropterus salmoides. Bank anglers constituted the largest number of formal participants (5 309 anglers affiliated to formal angling organisations) followed by bass anglers (1 184 anglers affiliated to formal angling organisations). The highly structured nature of organised recreational angling and dominant utilisation of inland fisheries resources by this sector illustrated not only the vested interest of anglers in the management and development of inland fisheries but also the role that anglers may play in future decision-making and monitoring through the dissemination of catch data from organised angling events. Generalised linear models (GLMs) and generalised additive models (GAMs) were used to standardise CPUE estimates from bass- and bank angling catch records, which provided the most suitable data, and to determine environmental variables which most influenced capture probabilities and CPUE. Capture probabilities and CPUE for bass were influenced primarily by altitude and conductivity and multiple regression analysis revealed that predictive models incorporating altitude, conductivity, surface area and capacity explained significant (p<0.05) amounts of variability in CPUE (53%), probability of capture (49%) and probability of limit bag (74%). Bank angling CPUE was influenced by conductivity, surface area and rainfall although an insignificant (p>0.05) amount of variability (63%) was explained by a predictive model incorporating these variables as investigations were constrained by small sample sizes and aggregated catch information. Scientific survey data provided multi-species information and highlighted the high proportion of non-native fish species in Eastern Cape impoundments. Gillnet catches were influenced primarily by species composition and were less subject to fluctuations induced by environmental factors. Overall standardised gillnet CPUE was influenced by surface area, conductivity and age of impoundment. Although the model fit was not significant at the p<0.05 level, 23% of the variability in the data was explained by a predictive model incorporating these variables. The presence of species which could be effectively targeted by gillnets was hypothesised to represent the most important factor influencing catch rates. Investigation of factors influencing CPUE in impoundments dominated by Clarias gariepinus and native cyprinids indicated that warmer, younger impoundments and smaller, colder impoundments produced higher catches of C. gariepinus and native cyprinids respectively. A predictive model for C. gariepinus abundance explained a significant amount of variability (77%) in CPUE although the small sample size of impoundments suggests that predictions from this model may not be robust. CPUE of native cyprinids was influenced primarily by the presence of Labeo umbratus and constrained by small sample size of impoundments and the model did not adequately explain the variability in the data (r² = 0.31, p>0.05). These results indicate that angling catch- and scientific survey data can be useful in providing predictions of fish abundance that are biologically realistic. However, more data over a greater spatial scale would allow for more robust predictions of catch rates. This could be achieved through increased monitoring of existing resource users, the creation of a centralised database for catch records from angling competitions, and increased scientific surveys of South African impoundments conducted by a dedicated governmental function.
- Full Text:
Contribution towards the development of a management plan for the baitboat and sport fishery for tuna in South Africa
- Authors: Newcombe, Hylton Cecil
- Date: 2012
- Subjects: Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5249 , http://hdl.handle.net/10962/d1005092 , Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Description: Tuna are of significant global economic importance and a prime food source. Increased levels of fishing have resulted in many stocks being under threat and a number of species are considered to be overfished. The South African tuna industry has had limited management attention from the South African fisheries management agency. A recent development has been an increase in the number of tuna caught by small vessels that target the fresh tuna market in South Africa and overseas. This has highlighted the importance of developing a holistic management plan for the sector and creating an awareness, among vessel owners, of the importance of compliance with initiatives such as the Marine Stewardship Council (MSC). The South African tuna fishery comprises three sectors: baitboat, sport and longline, all of which are currently in need of acquiring more biological and fisheries data. This project was initiated to collate existing information and to collect additional information where possible. This encompassed a qualitative and quantitative assessment of the size and shape of the tuna fishing industry, which included estimates of total catch, effort, catch-per-unit-of-effort (CPUE) and stock structure (obtained through comparative estimates of age and growth), as well as socio-economic and economic information. A technique involving an examination of specific vertebrae was used to obtain age-growth information for T. albacares. These data were used to estimate von Bertalanffy (VBGF) growth parameters: F 2 1. , k 0.1 , and t₀ -0. 1 year. No significant differences in growth parameters were found in yellowfin tuna (Thunnus albacares) from different localities around the South African coast, i.e. from the south eastern Atlantic and the south western Indian Ocean. In addition, growth did not differ between South Africa and other regions (Draganic and Pelzcarski 1984, Fonteneau 1980, Gascuel et al. 1992, LeGuen and Sakagawa 1973, Lehodey and Leroy 1999, Lessa and Duarte-Neto 2004, Shuford et al. 2007, Stequert et al. 1996, Wild 1986, Yang et al. 1969). Further substantiation of the above-mentioned observations was found by recording differences in the sizes of fish caught in the inshore (baitboat and sport fishery vessels) and offshore (large pelagic longline vessels) sectors of South African tuna fisheries. A significant difference between the regions — in terms of the size of fish caught inshore — was noted, with mostly-juvenile fish being caught in KwaZulu-Natal (5.4 ± 3.5kg), sub-adult fish in the Eastern Cape (26.2 ± 13.4kg), and adult fish in the Western Cape (42.3 ± 14.4kg). Since mostly-adult fish were caught offshore by longliners, with no significant differences between regions, it is however possible th at adult fish predominantly inhabit the offshore region. Yellowfin tuna caught by the large pelagic longline fishery in the three managerial zones (A, B and C) were predominantly adult fish of similar size, namely Zone A: 38.9 ± 6.9kg; Zone B: 28.7 ± 4.6kg, and Zone C: 36.0 ± 5.1kg. The recreational ski boat sport fishery has remained stable, in terms of participation, consisting mostly of white middle aged males in the top 25% of household income distribution, having either permanent occupational status or being retired. Fishers within this sector are willing to incur great expense to partake in the fishery and they provide an important economic contribution to coastal towns, particularly in the Eastern Cape. The total catch (of 83t) of yellowfin tuna by the competitive sport fishery within the Western and Eastern Cape regions was considerably lower than that of commercial tuna baitboat catches, which amounted to 186t, and the large pelagic longline sector that caught t in 200. It is however likely that the competitive sport fishery's total yellowfin tuna catch (of 83t in 2009) of the Eastern and Western Cape competitive sport fishery was considerably less than the total yellowfin tuna catches of the whole South African deep-sea sport fishery. Longfin tuna are the primary target species of South Africa‘s baitboat fisheries, comprising an average of 86% of the total catch and generating ZAR49 million in employment income in 2002. South Africa was responsible for 20% of the total longfin tuna annual yield in 2004 in the southern Atlantic Ocean, behind Taiwan with 59%. However, yellowfin tuna only contributes a small percentage towards total catches (8.4 ± 8.2% between 1995 and 2009), generating ZAR1.3 million in employment income in 2002. Of the four vessel categories comprising the tuna baitboat fishery, ski boats had the highest yellowfin tuna CPUE in 2009 (117 ± 62 kg.vessel⁻¹.day⁻¹) and the lowest effort. The ski boats sector is the most opportunistic fishery as they are only active when either longfin or yellowfin tuna are in high abundance. At such times catches are guaranteed, so can be expected to offset expenses. In 2009 the CPUE for yellowfin tuna for 15–19m vessels and freezer deckboats was 12 ± 20kg.vessel⁻¹.day⁻¹ and 3 ± 6kg.vessel⁻¹.day⁻¹, respectively. These vessels specifically target longfin tuna when they are in abundance. Since the start of the tuna baitboat fishery in 1995, there has been a substantial increase in the number of new entrants. In 2002 this sector had a fleet size of 82 vessels with a capital value of ZAR163 million and a total employment income of ZAR58 million, employing 2 173 fishers, of which 87% were black African. The commercial tuna baitboat fleet has subsequently grown to 200 vessels and 3600 crew, with 110 active vessels fishing for a combined fleet average of 46 days per year. There are a high number of owner-operated vessels. Since 2007 the fishery's profit to cost ratio has been low due to the low abundance of tuna stocks off the coast of South Africa, which has resulted in poor catch returns, placing economic pressure on the fishery. The baitboat industry is a low-profit-margin fishery with a total net catch value worth ZAR90 million in 2009 (Feike 2010). The abundance of yellowfin tuna influences profit margins, with very high profits being made when abundance and catches are high. The large pelagic longline fishery has a total allowable effort of 43 vessels of which only 30 vessels fished during 2009, when a reported 766t of yellowfin tuna were caught, representing a total tonnage far in excess of that obtained by the combined effort of the baitboat and sport fishery. It is, however, assumed that considerable underreporting of catches takes place within this fishery, which means that the estimated total net catch value of ZAR100 million could, in fact, be much higher. Such underreporting of catches is of great concern for this fishery, as is the high bycatch of Chondricthians spp. that significantly outweighs imposed regulatory limits (DEAT 2007). The present study demonstrates the current lack of comprehensive catch and effort data for the sport, baitboat and longline fisheries as well as the serious limitations and flaws associated with current databases. Results from the present study have drawn attention to a number of high-priority research needs, as outlined below. (1) A major lack of comprehensive catch and effort data for the sport fishery, which can be rectified by focussing on obtaining more competition data, as well as high-quality catch and effort and socio-economic information, as opposed to relying on information from non-club anglers (Gartside et al. 1999, Williams 2003, Cass-Calay 2008). Acquisition of such data is relatively inexpensive: the location of organized clubs and their frequent competition meetings provide widespread coverage along the Southern African coastline. Such data acquisition efforts have the potential to provide reliable information on spatial catch trends. (2) Validation of vessel catch return data is required for commercial fisheries and on some recent data that has emerged from studies of catch rates and trends for target species, particularly in the longline fishery. In this context it should be noted that the most recent peer-reviewed publications on this exploratory fishery were published more than a decade ago (Kroese 1999, Penny and Griffiths 1999). Additional studies need to be undertaken and journal articles published on the current stock status of South African catches of yellowfin and bigeye tuna and swordfish.
- Full Text:
- Authors: Newcombe, Hylton Cecil
- Date: 2012
- Subjects: Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5249 , http://hdl.handle.net/10962/d1005092 , Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Description: Tuna are of significant global economic importance and a prime food source. Increased levels of fishing have resulted in many stocks being under threat and a number of species are considered to be overfished. The South African tuna industry has had limited management attention from the South African fisheries management agency. A recent development has been an increase in the number of tuna caught by small vessels that target the fresh tuna market in South Africa and overseas. This has highlighted the importance of developing a holistic management plan for the sector and creating an awareness, among vessel owners, of the importance of compliance with initiatives such as the Marine Stewardship Council (MSC). The South African tuna fishery comprises three sectors: baitboat, sport and longline, all of which are currently in need of acquiring more biological and fisheries data. This project was initiated to collate existing information and to collect additional information where possible. This encompassed a qualitative and quantitative assessment of the size and shape of the tuna fishing industry, which included estimates of total catch, effort, catch-per-unit-of-effort (CPUE) and stock structure (obtained through comparative estimates of age and growth), as well as socio-economic and economic information. A technique involving an examination of specific vertebrae was used to obtain age-growth information for T. albacares. These data were used to estimate von Bertalanffy (VBGF) growth parameters: F 2 1. , k 0.1 , and t₀ -0. 1 year. No significant differences in growth parameters were found in yellowfin tuna (Thunnus albacares) from different localities around the South African coast, i.e. from the south eastern Atlantic and the south western Indian Ocean. In addition, growth did not differ between South Africa and other regions (Draganic and Pelzcarski 1984, Fonteneau 1980, Gascuel et al. 1992, LeGuen and Sakagawa 1973, Lehodey and Leroy 1999, Lessa and Duarte-Neto 2004, Shuford et al. 2007, Stequert et al. 1996, Wild 1986, Yang et al. 1969). Further substantiation of the above-mentioned observations was found by recording differences in the sizes of fish caught in the inshore (baitboat and sport fishery vessels) and offshore (large pelagic longline vessels) sectors of South African tuna fisheries. A significant difference between the regions — in terms of the size of fish caught inshore — was noted, with mostly-juvenile fish being caught in KwaZulu-Natal (5.4 ± 3.5kg), sub-adult fish in the Eastern Cape (26.2 ± 13.4kg), and adult fish in the Western Cape (42.3 ± 14.4kg). Since mostly-adult fish were caught offshore by longliners, with no significant differences between regions, it is however possible th at adult fish predominantly inhabit the offshore region. Yellowfin tuna caught by the large pelagic longline fishery in the three managerial zones (A, B and C) were predominantly adult fish of similar size, namely Zone A: 38.9 ± 6.9kg; Zone B: 28.7 ± 4.6kg, and Zone C: 36.0 ± 5.1kg. The recreational ski boat sport fishery has remained stable, in terms of participation, consisting mostly of white middle aged males in the top 25% of household income distribution, having either permanent occupational status or being retired. Fishers within this sector are willing to incur great expense to partake in the fishery and they provide an important economic contribution to coastal towns, particularly in the Eastern Cape. The total catch (of 83t) of yellowfin tuna by the competitive sport fishery within the Western and Eastern Cape regions was considerably lower than that of commercial tuna baitboat catches, which amounted to 186t, and the large pelagic longline sector that caught t in 200. It is however likely that the competitive sport fishery's total yellowfin tuna catch (of 83t in 2009) of the Eastern and Western Cape competitive sport fishery was considerably less than the total yellowfin tuna catches of the whole South African deep-sea sport fishery. Longfin tuna are the primary target species of South Africa‘s baitboat fisheries, comprising an average of 86% of the total catch and generating ZAR49 million in employment income in 2002. South Africa was responsible for 20% of the total longfin tuna annual yield in 2004 in the southern Atlantic Ocean, behind Taiwan with 59%. However, yellowfin tuna only contributes a small percentage towards total catches (8.4 ± 8.2% between 1995 and 2009), generating ZAR1.3 million in employment income in 2002. Of the four vessel categories comprising the tuna baitboat fishery, ski boats had the highest yellowfin tuna CPUE in 2009 (117 ± 62 kg.vessel⁻¹.day⁻¹) and the lowest effort. The ski boats sector is the most opportunistic fishery as they are only active when either longfin or yellowfin tuna are in high abundance. At such times catches are guaranteed, so can be expected to offset expenses. In 2009 the CPUE for yellowfin tuna for 15–19m vessels and freezer deckboats was 12 ± 20kg.vessel⁻¹.day⁻¹ and 3 ± 6kg.vessel⁻¹.day⁻¹, respectively. These vessels specifically target longfin tuna when they are in abundance. Since the start of the tuna baitboat fishery in 1995, there has been a substantial increase in the number of new entrants. In 2002 this sector had a fleet size of 82 vessels with a capital value of ZAR163 million and a total employment income of ZAR58 million, employing 2 173 fishers, of which 87% were black African. The commercial tuna baitboat fleet has subsequently grown to 200 vessels and 3600 crew, with 110 active vessels fishing for a combined fleet average of 46 days per year. There are a high number of owner-operated vessels. Since 2007 the fishery's profit to cost ratio has been low due to the low abundance of tuna stocks off the coast of South Africa, which has resulted in poor catch returns, placing economic pressure on the fishery. The baitboat industry is a low-profit-margin fishery with a total net catch value worth ZAR90 million in 2009 (Feike 2010). The abundance of yellowfin tuna influences profit margins, with very high profits being made when abundance and catches are high. The large pelagic longline fishery has a total allowable effort of 43 vessels of which only 30 vessels fished during 2009, when a reported 766t of yellowfin tuna were caught, representing a total tonnage far in excess of that obtained by the combined effort of the baitboat and sport fishery. It is, however, assumed that considerable underreporting of catches takes place within this fishery, which means that the estimated total net catch value of ZAR100 million could, in fact, be much higher. Such underreporting of catches is of great concern for this fishery, as is the high bycatch of Chondricthians spp. that significantly outweighs imposed regulatory limits (DEAT 2007). The present study demonstrates the current lack of comprehensive catch and effort data for the sport, baitboat and longline fisheries as well as the serious limitations and flaws associated with current databases. Results from the present study have drawn attention to a number of high-priority research needs, as outlined below. (1) A major lack of comprehensive catch and effort data for the sport fishery, which can be rectified by focussing on obtaining more competition data, as well as high-quality catch and effort and socio-economic information, as opposed to relying on information from non-club anglers (Gartside et al. 1999, Williams 2003, Cass-Calay 2008). Acquisition of such data is relatively inexpensive: the location of organized clubs and their frequent competition meetings provide widespread coverage along the Southern African coastline. Such data acquisition efforts have the potential to provide reliable information on spatial catch trends. (2) Validation of vessel catch return data is required for commercial fisheries and on some recent data that has emerged from studies of catch rates and trends for target species, particularly in the longline fishery. In this context it should be noted that the most recent peer-reviewed publications on this exploratory fishery were published more than a decade ago (Kroese 1999, Penny and Griffiths 1999). Additional studies need to be undertaken and journal articles published on the current stock status of South African catches of yellowfin and bigeye tuna and swordfish.
- Full Text:
Salinity induced physiological responses in juvenile dusky kob, Argyrosomus japonicus (Sciaenidae)
- Authors: Bernatzeder, Andrea Katinka
- Date: 2009
- Subjects: Osmoregulation , Argyrosomus -- Effects of salt on -- South Africa , Sciaenidae -- Effects of salt on -- South Africa , Argyrosomus -- Physiology , Sciaenidae -- Physiology , Fishes -- Physiology , Biological control systems , Marine ecology -- South Africa , Fishery management -- South Africa , Mariculture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5318 , http://hdl.handle.net/10962/d1005163 , Osmoregulation , Argyrosomus -- Effects of salt on -- South Africa , Sciaenidae -- Effects of salt on -- South Africa , Argyrosomus -- Physiology , Sciaenidae -- Physiology , Fishes -- Physiology , Biological control systems , Marine ecology -- South Africa , Fishery management -- South Africa , Mariculture -- South Africa
- Description: Fisheries management regulations for dusky kob Argyrosomus japonicus, an important commercial and recreational fisheries species, have failed and the stock is considered collapsed. It is important to take an ecosystems approach to management which includes understanding the effect of environmental factors on recruitment, abundance and distribution. The distribution of early juveniles (20-150 mm TL) in the wild appears to be restricted to the upper reaches of estuaries at salinities below 5 psu. Food availability could not explain the distribution of early juveniles. The aim of this study was to investigate the role of salinity on the distribution of early juvenile dusky kob (<150 mm TL) by examining physiological responses of juveniles exposed to a range of salinities under laboratory conditions. The hypothesis was that the physiological functioning of early juveniles would be optimised at the reduced salinities which they naturally occur at. The objectives of this study were to investigate the effect of salinity on: i) plasma osmolality; ii) growth, food conversion ratio and condition factor; and iii) gill histology with emphasis on chloride cell size and number. A preliminary study was undertaken to determine whether the use of 2-phenoxyethanol had an effect on plasma osmolality. Juveniles pithed prior to blood sampling were used as the control. Plasma osmolality was not affected by exposure or duration of exposure (2, 4, 6, 8, 10 min) to 2-phenoxyethanol. The ability of teleosts to regulate plasma osmolality over a wide range of salinities indicates their degree of ‘physiological euryhalinity’. Plasma osmolality of juveniles exposed to 5, 12 and 35 psu was measured every two weeks over a total of six weeks. Although juveniles were able to regulate plasma osmolality over the duration of the experiment, plasma osmolality at 5 and 12 psu was significantly lower than in fish maintained at 35 psu. Growth is used as an indicator of the relative energy used for osmoregulation at different salinities, as the energy used for osmoregulation becomes unavailable for growth. A nineweek growth experiment was conducted on juveniles exposed to 5, 12 and 35 psu. Juveniles grew and survived at all three salinities. However, growth of juveniles at 5 psu was significantly lower than at 12 and 35 psu. Other than a significantly greater weight gain at 35 psu relative to 12 psu, there was no significant difference in specific growth and length gain between juveniles at 12 and 35 psu. Food conversion ratio and condition factor at 12 and 35 psu were not significantly different, but food conversion ratio and condition factor at 5 psu was significantly greater and lower than at 35 psu respectively. In fish, gills are considered the major organ involved in osmoregulation. Within the gills, chloride cells are the predominant site of ion exchange which is driven by the Na⁺, K⁺- ATPase enzyme. Gill samples of juveniles exposed to 5, 12 and 35 psu for six weeks were examined histologically using light microscopy. Chloride cells of juveniles maintained at 5 psu were significantly more abundant than in juveniles at 12 and 35 psu. Chloride cells of juveniles at 5 psu were significantly larger than in juveniles kept at 12 psu, but not significantly different to those of juveniles kept at 35 psu. The ability of the juvenile fish to regulate plasma osmolality indicates that they are 'physiologically euryhaline', but the reduced growth and proliferation of chloride cells at 5 psu suggests that energy expenditure for osmoregulation is increased at hypoosmotic salinities. Salinity induced physiological responses could therefore not explain the natural distribution of early juvenile dusky kob and it is proposed that other environmental factors (e.g. temperature) are also important. It is also hypothesised that the high conductivity of an estuary in South Africa, to which our understanding is limited, may negate the effect of reduced salinity. Although freshwater input into estuaries is an important factor, further investigations to explain the distribution and abundance of early juveniles is required to make management recommendations. Dusky kob is also becoming an increasingly popular aquaculture species in South Africa. In this regard, early juvenile dusky kob can be grown at salinities as low as 12 psu without negatively affecting growth and production.
- Full Text:
- Authors: Bernatzeder, Andrea Katinka
- Date: 2009
- Subjects: Osmoregulation , Argyrosomus -- Effects of salt on -- South Africa , Sciaenidae -- Effects of salt on -- South Africa , Argyrosomus -- Physiology , Sciaenidae -- Physiology , Fishes -- Physiology , Biological control systems , Marine ecology -- South Africa , Fishery management -- South Africa , Mariculture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5318 , http://hdl.handle.net/10962/d1005163 , Osmoregulation , Argyrosomus -- Effects of salt on -- South Africa , Sciaenidae -- Effects of salt on -- South Africa , Argyrosomus -- Physiology , Sciaenidae -- Physiology , Fishes -- Physiology , Biological control systems , Marine ecology -- South Africa , Fishery management -- South Africa , Mariculture -- South Africa
- Description: Fisheries management regulations for dusky kob Argyrosomus japonicus, an important commercial and recreational fisheries species, have failed and the stock is considered collapsed. It is important to take an ecosystems approach to management which includes understanding the effect of environmental factors on recruitment, abundance and distribution. The distribution of early juveniles (20-150 mm TL) in the wild appears to be restricted to the upper reaches of estuaries at salinities below 5 psu. Food availability could not explain the distribution of early juveniles. The aim of this study was to investigate the role of salinity on the distribution of early juvenile dusky kob (<150 mm TL) by examining physiological responses of juveniles exposed to a range of salinities under laboratory conditions. The hypothesis was that the physiological functioning of early juveniles would be optimised at the reduced salinities which they naturally occur at. The objectives of this study were to investigate the effect of salinity on: i) plasma osmolality; ii) growth, food conversion ratio and condition factor; and iii) gill histology with emphasis on chloride cell size and number. A preliminary study was undertaken to determine whether the use of 2-phenoxyethanol had an effect on plasma osmolality. Juveniles pithed prior to blood sampling were used as the control. Plasma osmolality was not affected by exposure or duration of exposure (2, 4, 6, 8, 10 min) to 2-phenoxyethanol. The ability of teleosts to regulate plasma osmolality over a wide range of salinities indicates their degree of ‘physiological euryhalinity’. Plasma osmolality of juveniles exposed to 5, 12 and 35 psu was measured every two weeks over a total of six weeks. Although juveniles were able to regulate plasma osmolality over the duration of the experiment, plasma osmolality at 5 and 12 psu was significantly lower than in fish maintained at 35 psu. Growth is used as an indicator of the relative energy used for osmoregulation at different salinities, as the energy used for osmoregulation becomes unavailable for growth. A nineweek growth experiment was conducted on juveniles exposed to 5, 12 and 35 psu. Juveniles grew and survived at all three salinities. However, growth of juveniles at 5 psu was significantly lower than at 12 and 35 psu. Other than a significantly greater weight gain at 35 psu relative to 12 psu, there was no significant difference in specific growth and length gain between juveniles at 12 and 35 psu. Food conversion ratio and condition factor at 12 and 35 psu were not significantly different, but food conversion ratio and condition factor at 5 psu was significantly greater and lower than at 35 psu respectively. In fish, gills are considered the major organ involved in osmoregulation. Within the gills, chloride cells are the predominant site of ion exchange which is driven by the Na⁺, K⁺- ATPase enzyme. Gill samples of juveniles exposed to 5, 12 and 35 psu for six weeks were examined histologically using light microscopy. Chloride cells of juveniles maintained at 5 psu were significantly more abundant than in juveniles at 12 and 35 psu. Chloride cells of juveniles at 5 psu were significantly larger than in juveniles kept at 12 psu, but not significantly different to those of juveniles kept at 35 psu. The ability of the juvenile fish to regulate plasma osmolality indicates that they are 'physiologically euryhaline', but the reduced growth and proliferation of chloride cells at 5 psu suggests that energy expenditure for osmoregulation is increased at hypoosmotic salinities. Salinity induced physiological responses could therefore not explain the natural distribution of early juvenile dusky kob and it is proposed that other environmental factors (e.g. temperature) are also important. It is also hypothesised that the high conductivity of an estuary in South Africa, to which our understanding is limited, may negate the effect of reduced salinity. Although freshwater input into estuaries is an important factor, further investigations to explain the distribution and abundance of early juveniles is required to make management recommendations. Dusky kob is also becoming an increasingly popular aquaculture species in South Africa. In this regard, early juvenile dusky kob can be grown at salinities as low as 12 psu without negatively affecting growth and production.
- Full Text:
Optimisation of a sampling protocol for long-term monitoring of temperate reef fishes
- Authors: Bennett, Rhett Hamilton
- Date: 2008
- Subjects: Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5309 , http://hdl.handle.net/10962/d1005154 , Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Description: Marine Protected Areas (MPAs), the Ecosystem Approach to Fisheries management (EAF) and Integrated Coastal Management (ICM) have been identified as possible alternatives to traditional linefish management measures, which have largely failed. Monitoring and assessment of fish communities on a long-term basis is necessary, and will provide a means to evaluate the effectiveness of such management measures. Therefore, standardised protocols and optimal sampling methods for long-term monitoring (LTM) and assessment of coastal fish communities are essential. This study aimed to identify suitable methods and develop a protocol for assessment of inshore reef fish communities. A suitable location for evaluation of proposed methods was identified in the warm temperate biogeographical region of South Africa, encompassing the well-established Tsitsikamma Coastal National Park MPA and an adjacent exploited area. Chrysoblephus laticeps (roman) was identified as an indicator species for the study, as it has been well-studied and is well represented in the area. Underwater visual census (UVC) and controlled fishing were identified as suitable methods. UVC transects were found to be superior to point counts, in terms of sampling efficiency, variability, bias and required sample size. An effort of two angler hours per fishing station was shown to provide low catch variability, while at the same time a representative catch and low overall cost and required time. The methods were incorporated in a proposed sampling protocol, and evaluated. The methods were able to detect known differences between protected and exploited communities. It is recommended that LTM within protected areas, for detection of natural change, be focused on community-level indicators, while LTM in exploited areas, aimed at detection of anthropogenic change, be focused on species-level indicators. The proposed protocol with standardised methods will allow for comparisons across a network of LTM sites and provide the opportunity for a broad-scale assessment of the effects of environmental variables on reef fish stocks. The protocol developed in this study has application in other biogeographical regions in South Africa, and other parts of the world. Shift in the focus of much marine research, in South Africa and elsewhere, to LTM, highlights the relevance and timeous nature of this study.
- Full Text:
- Authors: Bennett, Rhett Hamilton
- Date: 2008
- Subjects: Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5309 , http://hdl.handle.net/10962/d1005154 , Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
- Description: Marine Protected Areas (MPAs), the Ecosystem Approach to Fisheries management (EAF) and Integrated Coastal Management (ICM) have been identified as possible alternatives to traditional linefish management measures, which have largely failed. Monitoring and assessment of fish communities on a long-term basis is necessary, and will provide a means to evaluate the effectiveness of such management measures. Therefore, standardised protocols and optimal sampling methods for long-term monitoring (LTM) and assessment of coastal fish communities are essential. This study aimed to identify suitable methods and develop a protocol for assessment of inshore reef fish communities. A suitable location for evaluation of proposed methods was identified in the warm temperate biogeographical region of South Africa, encompassing the well-established Tsitsikamma Coastal National Park MPA and an adjacent exploited area. Chrysoblephus laticeps (roman) was identified as an indicator species for the study, as it has been well-studied and is well represented in the area. Underwater visual census (UVC) and controlled fishing were identified as suitable methods. UVC transects were found to be superior to point counts, in terms of sampling efficiency, variability, bias and required sample size. An effort of two angler hours per fishing station was shown to provide low catch variability, while at the same time a representative catch and low overall cost and required time. The methods were incorporated in a proposed sampling protocol, and evaluated. The methods were able to detect known differences between protected and exploited communities. It is recommended that LTM within protected areas, for detection of natural change, be focused on community-level indicators, while LTM in exploited areas, aimed at detection of anthropogenic change, be focused on species-level indicators. The proposed protocol with standardised methods will allow for comparisons across a network of LTM sites and provide the opportunity for a broad-scale assessment of the effects of environmental variables on reef fish stocks. The protocol developed in this study has application in other biogeographical regions in South Africa, and other parts of the world. Shift in the focus of much marine research, in South Africa and elsewhere, to LTM, highlights the relevance and timeous nature of this study.
- Full Text:
The feasibility of stock enhancement as a management tool for dusky kob (Argyrosomus japonicus) in South Africa
- Authors: Palmer, Ryan Michael
- Date: 2008
- Subjects: Argyrosomus -- South Africa , Argyrosomus -- Genetics , Fishery management -- South Africa , Fish stocking -- South Africa , Fisheries -- South Africa , Marine ecology -- South Africa , Fish culture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5281 , http://hdl.handle.net/10962/d1005125 , Argyrosomus -- South Africa , Argyrosomus -- Genetics , Fishery management -- South Africa , Fish stocking -- South Africa , Fisheries -- South Africa , Marine ecology -- South Africa , Fish culture -- South Africa
- Description: The dusky kob, Argyrosomus japonicus, is a popular South African “line fish” whose stocks have dwindled to dangerously low levels of between 1% and 4.5% of pristine spawner biomass per recruit. A. japonicus stocks are currently managed by means of minimum size restrictions and daily bag limits, and as a result of the inability of these measures to facilitate the recovery of the species over a realistic time frame, the need for an alternative management plan has become apparent. Given the status of the stock and management regime, stock enhancement appears to be an appropriate option to be investigated. This study evaluates the feasibility of stock enhancement as a possible management tool to assist with the recovery of this important South African linefish species. By evaluating the genetic and ecological implications related to stock enhancement, identifying a suitable tagging method for post-release monitoring, and evaluating the economic feasibility of such a programme, any fatal flaws would become immediately apparent. This coupled with the required framework for the development of a management plan for stock enhancement of A. japonicus provides direction further research and actions required in order to utilise stock enhancement as a management tool. Due to the nature of stock enhancement, there are several ecological and genetic issues that arise from such a programme. These issues were reviewed and the issues that were relevant to stock enhancement of A. japonicus identified. Ecological concerns that arose included those of competition, disease and seed quality, while genetic issues were concerned mainly in the possible loss of genetic variability and consequent reduction in fitness of the stock. Fortunately the technology exists to evaluate the effects and likelihood of these problems occurring as well as to minimise the likelihood of them occurring. By taking a scientific approach to stock enhancement, hatchery management, and release strategies can be manipulated in such a way as to minimise any negative effects that may be caused. Both ecological and genetic effects of stocking indicate a need for post-release monitoring of stock enhancement programmes. Stock enhancement requires a post-release monitoring programme, which in turn relies on an ability to distinguish between hatchery reared and wild fish. A study was conducted to evaluate the suitability of coded wire tags (CWT), visual implant fluorescent elastomers (VIFE), and oxytetracycline (OTC) as a means of distinguishing between hatchery reared and wild A. japonicus, for the purpose of a post-release monitoring programme. OTC appeared to be the most suitable as it produced 100% retention over a five month period compared to 62% and 61% for VIFE and CWT respectively. OTC is therefore suggested as a tagging method for the purpose of post-release monitoring of the stock enhancement of A. japonicus. To evaluate a possible funding option for stock enhancement of A. japonicus in South Africa, a willingness-to-pay survey, based on a “user pays” approach using recreational fishing permits as a vehicle for payment, included 102 recreational anglers in the Plettenberg Bay area. The survey showed that generally anglers were willing to pay more than the current amount for the recreational fishing permit. This promising result, coupled with the fact that there are approximately 450 000 recreational anglers leads to the belief that there is potential for a substantial increase in the funds generated for the Marine Living Resources Fund through recreational anglers. Stock enhancement should not be ruled out on the basis of economic feasibility yet as there is potential for it to be sustained by the users of the resource. An A. japonicus juvenile production costing model was created taking into account setup and running costs of a hatchery for A. japonicus, based on known parameters from existing facilities, and adjusting them to meet the requirements of a stock enhancement facility. Estimates varied according to the number and size of fish for release (values which can only be decided upon after further research), with setup estimated to be between R 10 000 000 and R 30 000 000 and annual running costs between R 2 400 000 and R 6 700 000 annually. These figures were dependant on the size and number of fish being produced, with production ranging between 100 000 and 5 000 000 fish of between 50 mm and 150 mm, and a broodstock of 150 individuals. Given the need for alternative management of A. japonicus in South Africa and the lack of evidence to suggest that it is an unfeasible option, this project has found no reason why further investigation into the use of stock enhancement for the management of A. japonicus should not proceed further provided the fishery is shown to be recruit limited. The technology and ability to overcome possible ecological and genetic problems exists, a suitable means of tagging for post-release monitoring exists, as does a realistic funding option. There is a substantial amount of research that must be done prior to stocking, for which a base framework is provided.
- Full Text:
- Authors: Palmer, Ryan Michael
- Date: 2008
- Subjects: Argyrosomus -- South Africa , Argyrosomus -- Genetics , Fishery management -- South Africa , Fish stocking -- South Africa , Fisheries -- South Africa , Marine ecology -- South Africa , Fish culture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5281 , http://hdl.handle.net/10962/d1005125 , Argyrosomus -- South Africa , Argyrosomus -- Genetics , Fishery management -- South Africa , Fish stocking -- South Africa , Fisheries -- South Africa , Marine ecology -- South Africa , Fish culture -- South Africa
- Description: The dusky kob, Argyrosomus japonicus, is a popular South African “line fish” whose stocks have dwindled to dangerously low levels of between 1% and 4.5% of pristine spawner biomass per recruit. A. japonicus stocks are currently managed by means of minimum size restrictions and daily bag limits, and as a result of the inability of these measures to facilitate the recovery of the species over a realistic time frame, the need for an alternative management plan has become apparent. Given the status of the stock and management regime, stock enhancement appears to be an appropriate option to be investigated. This study evaluates the feasibility of stock enhancement as a possible management tool to assist with the recovery of this important South African linefish species. By evaluating the genetic and ecological implications related to stock enhancement, identifying a suitable tagging method for post-release monitoring, and evaluating the economic feasibility of such a programme, any fatal flaws would become immediately apparent. This coupled with the required framework for the development of a management plan for stock enhancement of A. japonicus provides direction further research and actions required in order to utilise stock enhancement as a management tool. Due to the nature of stock enhancement, there are several ecological and genetic issues that arise from such a programme. These issues were reviewed and the issues that were relevant to stock enhancement of A. japonicus identified. Ecological concerns that arose included those of competition, disease and seed quality, while genetic issues were concerned mainly in the possible loss of genetic variability and consequent reduction in fitness of the stock. Fortunately the technology exists to evaluate the effects and likelihood of these problems occurring as well as to minimise the likelihood of them occurring. By taking a scientific approach to stock enhancement, hatchery management, and release strategies can be manipulated in such a way as to minimise any negative effects that may be caused. Both ecological and genetic effects of stocking indicate a need for post-release monitoring of stock enhancement programmes. Stock enhancement requires a post-release monitoring programme, which in turn relies on an ability to distinguish between hatchery reared and wild fish. A study was conducted to evaluate the suitability of coded wire tags (CWT), visual implant fluorescent elastomers (VIFE), and oxytetracycline (OTC) as a means of distinguishing between hatchery reared and wild A. japonicus, for the purpose of a post-release monitoring programme. OTC appeared to be the most suitable as it produced 100% retention over a five month period compared to 62% and 61% for VIFE and CWT respectively. OTC is therefore suggested as a tagging method for the purpose of post-release monitoring of the stock enhancement of A. japonicus. To evaluate a possible funding option for stock enhancement of A. japonicus in South Africa, a willingness-to-pay survey, based on a “user pays” approach using recreational fishing permits as a vehicle for payment, included 102 recreational anglers in the Plettenberg Bay area. The survey showed that generally anglers were willing to pay more than the current amount for the recreational fishing permit. This promising result, coupled with the fact that there are approximately 450 000 recreational anglers leads to the belief that there is potential for a substantial increase in the funds generated for the Marine Living Resources Fund through recreational anglers. Stock enhancement should not be ruled out on the basis of economic feasibility yet as there is potential for it to be sustained by the users of the resource. An A. japonicus juvenile production costing model was created taking into account setup and running costs of a hatchery for A. japonicus, based on known parameters from existing facilities, and adjusting them to meet the requirements of a stock enhancement facility. Estimates varied according to the number and size of fish for release (values which can only be decided upon after further research), with setup estimated to be between R 10 000 000 and R 30 000 000 and annual running costs between R 2 400 000 and R 6 700 000 annually. These figures were dependant on the size and number of fish being produced, with production ranging between 100 000 and 5 000 000 fish of between 50 mm and 150 mm, and a broodstock of 150 individuals. Given the need for alternative management of A. japonicus in South Africa and the lack of evidence to suggest that it is an unfeasible option, this project has found no reason why further investigation into the use of stock enhancement for the management of A. japonicus should not proceed further provided the fishery is shown to be recruit limited. The technology and ability to overcome possible ecological and genetic problems exists, a suitable means of tagging for post-release monitoring exists, as does a realistic funding option. There is a substantial amount of research that must be done prior to stocking, for which a base framework is provided.
- Full Text:
Aspects of the ecology and management of the Soupfin shark (Galeorhinus galeus) in South Africa
- Authors: McCord, Meaghen Erica
- Date: 2005
- Subjects: Soupfin shark -- South Africa , Soupfin shark -- Ecology -- South Africa , Fishery management -- South Africa , Shark fisheries -- Management -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5223 , http://hdl.handle.net/10962/d1005066 , Soupfin shark -- South Africa , Soupfin shark -- Ecology -- South Africa , Fishery management -- South Africa , Shark fisheries -- Management -- South Africa
- Description: Global trends in teleost fisheries indicate significant population declines. Thus, alternative fisheries are being developed to meet the growing economic and nutritional demands of the expanding human population. Recently, it has been established that elasmobranch fisheries may fulfill these demands. As many elasmobranchs possess life-history characteristics that make them particularly vulnerable to overfishing, it is imperative to develop management strategies prior to the inception of these fisheries to ensure sustainable resource utilisation. In South Africa, elasmobranchs have been commercially exploited since the 1930s. Although generally considered an under-exploited resource, the potential for growth within these fisheries has been recognized. In 2005, the commercial shark fishery will undergo a transition from medium to long-term rights allocations. This represents an ideal opportunity for scientists and managers to develop precautionary species-specific management plans for commercially exploitable elasmobranch species. The soupfin shark (Galeorhinus galeus) is one of the principal target species in South Africa’s shark fisheries. Given its inherent susceptibility to overexploitation, G. galeus was selected as a management priority by South Africa’s regional fisheries organisation. The purpose of this study was to examine and describe the stock status of G. galeus in South Africa, and to develop a precautionary fishery management plan to ensure the sustainability of this resource. Age, growth, and mortality calculations for G. galeus were made from research survey data collected between 1996 and 1999. A small sample size precluded independent analyses of females. The maximum recorded age for G. galeus was 33 years. Estimated von Bertalanffy growth parameters from observed length-at-age for males and combined sexes were: L∞ 1542.8 mm TL, K 0.21 year⁻¹ , t₀ -2.79 year⁻¹ and L∞ 1560.3 mm TL, K 0.19 year¹, t₀ -3.03 year⁻¹, respectively. The age-at-50% maturity was determined to be 6 years, corresponding to 1011 mm TL for males and 1100 mm TL for combined sexes. Natural mortality was calculated as 0.126 yr⁻¹. The rate of instantaneous total mortality was calculated as 0.27 yr⁻¹. Catch trend analysis showed that catches and CPUE of G. galeus are increasing in the demersal longline fishery, and decreasing in the handline fishery. Decreasing catches and CPUE were observed in fishery-independent research survey data. The status of the soupfin shark stock was modelled using per-recruit analysis. The SB/R model indicated the soupfin shark is being optimally exploited and spawner biomass is at 43% of preexploitation levels. Current fishing levels ( F = 0.14 yr⁻¹) approximate the Fsb₄₀ level (F = 0.17 yr¹); thus, an increase in fishing pressure may lead to stock collapse. It was determined that the current age-at-capture (7.9 years) should be increased to 10 years, or 1420 mm TL, to maximize yield and minimize the possibility of recruitment failure. The results of this study indicate a need for immediate scientific and management intervention in South Africa’s soupfin shark fishery. An assessment report and fishery management plan for G. galeus was compiled, and several management options were proposed. These include the implementation of licence and size restrictions, as well as seasonal/area closures. The potential for an experimental gillnet fishery should be investigated.
- Full Text:
- Authors: McCord, Meaghen Erica
- Date: 2005
- Subjects: Soupfin shark -- South Africa , Soupfin shark -- Ecology -- South Africa , Fishery management -- South Africa , Shark fisheries -- Management -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5223 , http://hdl.handle.net/10962/d1005066 , Soupfin shark -- South Africa , Soupfin shark -- Ecology -- South Africa , Fishery management -- South Africa , Shark fisheries -- Management -- South Africa
- Description: Global trends in teleost fisheries indicate significant population declines. Thus, alternative fisheries are being developed to meet the growing economic and nutritional demands of the expanding human population. Recently, it has been established that elasmobranch fisheries may fulfill these demands. As many elasmobranchs possess life-history characteristics that make them particularly vulnerable to overfishing, it is imperative to develop management strategies prior to the inception of these fisheries to ensure sustainable resource utilisation. In South Africa, elasmobranchs have been commercially exploited since the 1930s. Although generally considered an under-exploited resource, the potential for growth within these fisheries has been recognized. In 2005, the commercial shark fishery will undergo a transition from medium to long-term rights allocations. This represents an ideal opportunity for scientists and managers to develop precautionary species-specific management plans for commercially exploitable elasmobranch species. The soupfin shark (Galeorhinus galeus) is one of the principal target species in South Africa’s shark fisheries. Given its inherent susceptibility to overexploitation, G. galeus was selected as a management priority by South Africa’s regional fisheries organisation. The purpose of this study was to examine and describe the stock status of G. galeus in South Africa, and to develop a precautionary fishery management plan to ensure the sustainability of this resource. Age, growth, and mortality calculations for G. galeus were made from research survey data collected between 1996 and 1999. A small sample size precluded independent analyses of females. The maximum recorded age for G. galeus was 33 years. Estimated von Bertalanffy growth parameters from observed length-at-age for males and combined sexes were: L∞ 1542.8 mm TL, K 0.21 year⁻¹ , t₀ -2.79 year⁻¹ and L∞ 1560.3 mm TL, K 0.19 year¹, t₀ -3.03 year⁻¹, respectively. The age-at-50% maturity was determined to be 6 years, corresponding to 1011 mm TL for males and 1100 mm TL for combined sexes. Natural mortality was calculated as 0.126 yr⁻¹. The rate of instantaneous total mortality was calculated as 0.27 yr⁻¹. Catch trend analysis showed that catches and CPUE of G. galeus are increasing in the demersal longline fishery, and decreasing in the handline fishery. Decreasing catches and CPUE were observed in fishery-independent research survey data. The status of the soupfin shark stock was modelled using per-recruit analysis. The SB/R model indicated the soupfin shark is being optimally exploited and spawner biomass is at 43% of preexploitation levels. Current fishing levels ( F = 0.14 yr⁻¹) approximate the Fsb₄₀ level (F = 0.17 yr¹); thus, an increase in fishing pressure may lead to stock collapse. It was determined that the current age-at-capture (7.9 years) should be increased to 10 years, or 1420 mm TL, to maximize yield and minimize the possibility of recruitment failure. The results of this study indicate a need for immediate scientific and management intervention in South Africa’s soupfin shark fishery. An assessment report and fishery management plan for G. galeus was compiled, and several management options were proposed. These include the implementation of licence and size restrictions, as well as seasonal/area closures. The potential for an experimental gillnet fishery should be investigated.
- Full Text:
- «
- ‹
- 1
- ›
- »