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Morphological and genetic variation of Gymnothorax undulatus (Anguilliformes: Muraenidae) in the Western Indian Ocean

  • Authors: Sithole, Yonela
  • Date: 2018
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63722 , vital:28476
  • Description: Expected release date-April 2019
  • Full Text:
  • Date Issued: 2018

NetwIOC: a framework for the automated generation of network-based IOCS for malware information sharing and defence

  • Authors: Rudman, Lauren Lynne
  • Date: 2018
  • Subjects: Malware (Computer software) , Computer networks Security measures , Computer security , Python (Computer program language)
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/60639 , vital:27809
  • Description: With the substantial number of new malware variants found each day, it is useful to have an efficient way to retrieve Indicators of Compromise (IOCs) from the malware in a format suitable for sharing and detection. In the past, these indicators were manually created after inspection of binary samples and network traffic. The Cuckoo Sandbox, is an existing dynamic malware analysis system which meets the requirements for the proposed framework and was extended by adding a few custom modules. This research explored a way to automate the generation of detailed network-based IOCs in a popular format which can be used for sharing. This was done through careful filtering and analysis of the PCAP hie generated by the sandbox, and placing these values into the correct type of STIX objects using Python, Through several evaluations, analysis of what type of network traffic can be expected for the creation of IOCs was conducted, including a brief ease study that examined the effect of analysis time on the number of IOCs created. Using the automatically generated IOCs to create defence and detection mechanisms for the network was evaluated and proved successful, A proof of concept sharing platform developed for the STIX IOCs is showcased at the end of the research.
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  • Date Issued: 2018

Occurrence of mugilid and sparid fishes in Zostera capensis and bare sediment habitats of the Knysna Estuary

  • Authors: Pollard, Melissa
  • Date: 2018
  • Subjects: Gray mullets South Africa Knysna Lagoon , Sparidae South Africa Knysna Lagoon , Seagrasses South Africa Knysna Lagoon , Eelgrass South Africa Knysna Lagoon , Gray mullets Habitat South Africa Knysna Lagoon , Sparidae Habitat South Africa Knysna Lagoon , Underwater videography in wildlife monitoring , Seining , Zostera capensis Setchel
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/54979 , vital:26641
  • Description: Seagrass meadows are regarded as one of the most unique and valuable ecosystems in the biosphere, primarily because of the variety of services that they provide. Seagrass meadows serve as nursery grounds for many species and often play an important role in the juvenile stages of economically and recreationally important fish. Zostera capensis Setchell is one of the most dominant submerged macrophytes and the most common seagrass in South African estuaries and is often referred to as eelgrass. Zostera capensis meadows occupy a large area within the Knysna Estuary but little is known about their importance to associated fish assemblages. With Z. capensis meadows being under increased pressure from anthropogenic influences, it is important to establish which fish species and families utilize these habitats and what role they play in the ecology of fish assemblages within the Knysna Estuary. The primary objective of this study was to compare the use of Z. capensis and adjacent bare sediment areas by mainly large juvenile and subadult sparids and mugilids using different techniques. The two main hypotheses were as follows; 1) Mugilidae are likely to be more dominant in the unvegetated areas of the estuary littoral and Sparidae are likely to predominate within the Z. capensis bed areas of the estuary littoral. 2) The non-destructive underwater video monitoring method would yield similar fish composition data to seine netting sampling of the identical sites. Both hypotheses were assessed using data collected during this study and the analysis of historical unpublished data. Overall, Mugilidae were more abundant at bare unvegetated areas where they did most of their foraging. Sparidae were more abundant in the Z. capensis beds, which was also the habitat where they primarily foraged. With regards to the comparison of two different sampling methods, namely underwater video monitoring and seine netting, similar patterns arose with regards to the fish species observed in camera footage and those captured in the seine net, although the abundances were not always comparable.
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  • Date Issued: 2018

Periglacial landforms of the Ahlmannryggen and Jutulsessen areas of western Dronning Maud land, Antarctica

  • Authors: Wilmot, Nicola Frances
  • Date: 2018
  • Subjects: Periglacial processes Antarctica Queen Maud Land , Geomorphology Antarctica Queen Maud Land , Permafrost Antarctica Queen Maud Land , Freezes (Meteorology) Antarctica Queen Maud Land , Thawing Antarctica Queen Maud Land
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/61535 , vital:28034
  • Description: Periglacial landforms are a common occurrence in Ahlmannryggen and Jutulsessen areas of western Dronning Maud land (WDML). Classification and formation of these landforms were disputed in literature. In Antarctica information on periglacial landforms is limited or confined to a specific landform. Thus a holistic approach was taken when investigating the periglacial landforms found in WDML. An overview of the existing knowledge base on periglacial landforms in WDML was given which was coupled with the analysis of archival data. The landforms found in this area were patterned ground, openwork block deposits (OBD), rock glaciers, terraces, a pronival rampart and lake ice blisters. With patterned ground being the common periglacial landform in WDML, heave monitoring was used where time-lapse videos were used to investigate the formation processes in patterned ground. From consolidating existing knowledge as well as adding new knowledge on the formation of periglacial landforms, it is clear that the landforms in Antarctica should not be compared to other examples, especially examples from the northern hemisphere. Further research in the formation of periglacial landforms is needed and can be further enhanced with more extensive use of the heave monitoring method in future research.
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  • Date Issued: 2018

Potential impact and host range of Pereskiophaga brasiliensis Anderson (Curculionidae): a new candidate biological control agent for the control of Pereskia aculeata Miller (Cactaceae) in South Africa

  • Authors: Mdodana, Lumka Anita
  • Date: 2018
  • Subjects: Curculionidae -- South Africa , Cactus -- South Africa , Biological pest control agents , Alien plants-- South Africa , Pereskiophaga brasiliensis Anderson (Curculionidae) , Pereskia aculeata Miller (Cactaceae)
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/62350 , vital:28157
  • Description: Pereskia aculeata Miller (Cactaceae) is a damaging invasive alien plant in South Africa that has negative impacts to indigenous biodiversity and ecosystem functioning. Mechanical and chemical control are not effective against P. aculeata so biological control is considered the only viable option. Two biological control agents, the leaf-feeding beetle Phenrica guerini Bechyne (Chrysomelidae) and the stem-wilting bug Catorhintha schaffneri (Coreidae), have been released in South Africa thus far. Post-release evaluations have indicated that P. guerini will not reduce P. aculeata densities to acceptable levels alone, while C. schaffneri was released very recently, so it is too soon to determine how effective that agent will be. Even if C. schaffneri is extremely damaging, it is likely that further agents will be required to reduce the densities of P. aculeata to acceptable levels within a reasonable time-scale. Additional agents should target the woody stems of P. aculeata which are not impacted by the damage of either of the released agents. Pereskiophaga brasiliensis Anderson (Curculionidae) is a promising potential candidate agent that feeds on the thick woody stems of the plant in the larval stage. Climatic matching, genetic matching and field based host specificity observations all indicated that P. brasiliensis was a promising candidate. In this study, the impact of P. brasiliensis to the target weed, P. aculeata, was quantified under quarantine conditions to determine whether it was sufficiently damaging to warrant release. This was followed by host specificity testing to determine whether P. brasiliensis was suitably host specific for release in South Africa. Impact studies indicated that P. brasiliensis was damaging to P. aculeata at insect densities that would be expected in the field. Pereskiophaga brasiliensis reduced the number of leaves of P. aculeata to a greater extent than it reduced shoot lengths, but both plant parameters were significantly reduced due to the feeding damage from the insect. This suggests that the damage from P. brasiliensis may be compatible with that of C. schaffneri which reduces shoot length to a greater degree than the number of leaves. Pereskiophaga brasiliensis is therefore sufficiently damaging to warrant release, and although interaction studies with the other agents would be required, it is expected that it should complement other existing agents. Although P. brasiliensis is sufficiently damaging, at present the host specificity data indicates that it is not suitably specific for release in South Africa because oviposition and larval development to the adult stage was recorded on both indigenous and alien plant species within the families Cactaceae and Basellaceae. This non-target feeding was recorded during no-choice tests, which are very conservative, but significant non-target damage and development to the adult stage was recorded on an indigenous plant from a different family to the target weed. Further host specificity testing, including paired and multiple choice tests, are required to confirm the broad host range of P. brasiliensis. Other biological control agents that damage the woody stems of P. aculeata should be considered. The stem-borer, Acanthodoxus machacalis (Cerambycidae) is considered the most promising of the other candidate agents as it can be sourced from a climatically matched region where genetically suitable P. aculeata plants are found, it is sufficiently damaging to the woody stems of P. aculeata and there is no evidence that the species has a broad host range. Acanthodoxus machacalis should be sourced from Rio de Janeiro, Brazil, and imported into quarantine in South Africa for host specificity testing.
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  • Date Issued: 2018

Practical application of distributed ledger technology in support of digital evidence integrity verification processes

  • Authors: Weilbach, William Thomas
  • Date: 2018
  • Subjects: Digital forensic science , Blockchains (Databases) , Bitcoin , Distributed databases , Computer systems Verification
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/61872 , vital:28070
  • Description: After its birth in cryptocurrencies, distributed ledger (blockchain) technology rapidly grew in popularity in other technology domains. Alternative applications of this technology range from digitizing the bank guarantees process for commercial property leases (Anz and IBM, 2017) to tracking the provenance of high-value physical goods (Everledger Ltd., 2017). As a whole, distributed ledger technology has acted as a catalyst to the rise of many innovative alternative solutions to existing problems, mostly associated with trust and integrity. In this research, a niche application of this technology is proposed for use in digital forensics by providing a mechanism for the transparent and irrefutable verification of digital evidence, ensuring its integrity as established blockchains serve as an ideal mechanism to store and validate arbitrary data against. Evaluation and identification of candidate technologies in this domain is based on a set of requirements derived from previous work in this field (Weilbach, 2014). OpenTimestamps (Todd, 2016b) is chosen as the foundation of further work for its robust architecture, transparent nature and multi-platform support. A robust evaluation and discussion of OpenTimestamps is performed to reinforce why it can be trusted as an implementation and protocol. An implementation of OpenTimestamps is designed for the popular open source forensic tool, Autopsy, and an Autopsy module is subsequently developed and released to the public. OpenTimestamps is tested at scale and found to have insignificant error rates for the verification of timestamps. Through practical implementation and extensive testing, it is shown that OpenTimestamps has the potential to significantly advance the practice of digital evidence integrity verification. A conclusion is reached by discussing some of the limitations of OpenTimestamps in terms of accuracy and error rates. It is shown that although OpenTimestamps has very specific timing claims in the attestation, with a near zero error rate, the actual attestation is truly accurate to within a day. This is followed by proposing potential avenues for future work.
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  • Date Issued: 2018

Primary controls on iron and manganese distribution in sphalerite of the Gams Formation, Gamsberg zinc deposit, Namaqualand, South Africa

  • Authors: Poignant-Molina, Léo
  • Date: 2018
  • Subjects: Sphalerite , Sphalerite South Africa Gamsberg , Manganese South Africa Gamsberg , Zinc mines and mining South Africa Gamsberg , Geochemistry South Africa Gamsberg , Metamorphism (Geology) , Electron probe microanalysis
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63775 , vital:28488
  • Description: The Gamsberg deposit is a 200 Mt zinc reserve belonging to the world class base metalrich Aggeneys-Gamsberg mining district. A rifting environment permitted the development of four proximal SEDEX-type deposits whereby Gamsberg is localized in the eastern side of the district and characterised by a peculiar enrichment in manganese. This study investigates the geochemistry of sphalerite in the Gams Formation holding the economic units of the deposit. Microscopic petrography revealed that most of primary textures have been overprinted by recrystallization, alteration, replacement and deformational textures produced during the polyphase metamorphism of the Namaquan Orogeny. Therefore, EPMA analysis provided the bulk of information to define the geochemical distribution of sphalerite. A lateral variation was noticed throughout the Gams Formation, whereby the North orebody presents Zn-rich and Fe+Mn-poor sphalerite while the West and East orebodies contain Zn-poor and Fe-Mn-rich sphalerite. This feature has been interpreted as the association of a chemocline and a variation in the basin topography defining deep Mn+Fe-rich zones and shallow Mn+Fe-poor zones in the primitive basin. It is suggested that mineralized hot brines mixed with seawater developed the chemocline. The uneven topography shaped the geochemical variation between the actual orebodies.
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  • Date Issued: 2018

Pursuing cost-effective secure network micro-segmentation

  • Authors: Fürst, Mark Richard
  • Date: 2018
  • Subjects: Computer networks -- Security measures , Computer networks -- Access control , Firewalls (Computer security) , IPSec (Computer network protocol) , Network micro-segmentation
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/131106 , vital:36524
  • Description: Traditional network segmentation allows discrete trust levels to be defined for different network segments, using physical firewalls or routers that control north-south traffic flowing between different interfaces. This technique reduces the attack surface area should an attacker breach one of the perimeter defences. However, east-west traffic flowing between endpoints within the same network segment does not pass through a firewall, and an attacker may be able to move laterally between endpoints within that segment. Network micro-segmentation was designed to address the challenge of controlling east-west traffic, and various solutions have been released with differing levels of capabilities and feature sets. These approaches range from simple network switch Access Control List based segmentation to complex hypervisor based software-defined security segments defined down to the individual workload, container or process level, and enforced via policy based security controls for each segment. Several commercial solutions for network micro-segmentation exist, but these are primarily focused on physical and cloud data centres, and are often accompanied by significant capital outlay and resource requirements. Given these constraints, this research determines whether existing tools provided with operating systems can be re-purposed to implement micro-segmentation and restrict east-west traffic within one or more network segments for a small-to-medium sized corporate network. To this end, a proof-of-concept lab environment was built with a heterogeneous mix of Windows and Linux virtual servers and workstations deployed in an Active Directory domain. The use of Group Policy Objects to deploy IPsec Server and Domain Isolation for controlling traffic between endpoints is examined, in conjunction with IPsec Authenticated Header and Encapsulating Security Payload modes as an additional layer of security. The outcome of the research shows that revisiting existing tools can enable organisations to implement an additional, cost-effective secure layer of defence in their network.
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  • Date Issued: 2018

Quantification of pre-competitive sleep/wake behaviour in a sample of South African cyclists

  • Authors: Steenekamp, Travis
  • Date: 2018
  • Subjects: Sleep deprivation , Cyclists Health and hygiene South Africa , Sleep Physiological aspects , Performance , Performance anxiety
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/59015 , vital:27408
  • Description: The quantification of athlete pre-competitive sleep behaviour is of interest owing to the possibility that sleep loss may have a negative effect on health and performance. The purpose of this study was to monitor and quantify the sleep/wake patterns of South African cyclists prior to competitive races. A total of 336 cyclists, male and female and of differing competition levels, cycling in either the 2015 Tsogo Sun Amashova or the 2016 Telkom 94.7 Cycle Challenge completed an altered version of the Competitive Sports and Sleep Questionnaire. The questionnaire asked cyclists to report on precompetitive sleep over the past year. A subset of 92 cyclists also recorded a Core Consensus Sleep Diary for the three nights leading up to the races. The questionnaire showed that 67% of the cyclists reported worsened sleep at least once prior to competition within the past 12 months. The sleep diary found that the cyclists’ average sleep duration the night before the races was 6h19min (±1h38min), which was significantly less than two and three nights prior to the races. Sleep quality was also shown to deteriorate significantly the night before the races. The contributing factors leading to worsened pre-competitive sleep were the time the cyclists had to wake-up as well as perceived increases in sleep latency and awakenings after sleep onset. Anxiety was found to be the major cause of sleep disturbances. While females were found to be significantly more likely to report having experienced poorer sleep before competition in the past year, the sleep diary showed no difference in sleep the night before the races between the sexes. Females were significantly more likely to report instances of unpleasant dreams and waking up during the night. Again, the sleep diary data did not corroborate these findings. Females were also found to report significantly more accounts of nervousness or thoughts about competition as being the cause of sleep problems. There was no difference in sleep loss the night before competition when comparing competition-level groups. The only significant difference was that recreational cyclists were more likely to report sleeping in foreign environments as a cause of sleep disturbances. Despite a large percentage of cyclists experiencing pre-competitive sleep loss, over half (55%) perceived sleep loss to have no impact on their performance. Analysis of pre-sleep behaviour also revealed that the cyclists engaged in several practices that may have a negative effect on subsequent sleep. The vast majority of the cyclists (61%) indicated having no specific strategy to help them sleep the night before competition. Fifteen percent of cyclists reporting using media devices to help them fall asleep, a practice that has been shown to disrupt sleep. In conclusion, most cyclists, regardless of sex and level of competition experience precompetitive sleep loss attributed largely to anxiety but with the perception that this loss in sleep does not negatively impact their performance.
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  • Date Issued: 2018

Quantification of water resources uncertainties in two sub-basins of the Limpopo River basin

  • Authors: Oosthuizen, Nadia
  • Date: 2018
  • Subjects: Hydrologic models -- Limpopo River Watershed , Water-supply -- Limpopo River Watershed , Water-supply -- Management , Sustainable development , Rain and rainfall -- Mathematical models , Runoff -- Mathematical models , Reservoirs -- Limpopo River Watershed
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63267 , vital:28388
  • Description: The demand for water is rapidly growing, placing more strain on access to the resources and subsequently its management. For sustainable management, there is a need to accurately quantify the available water resources. Unfortunately, the data required for such assessments are frequently far from sufficient in terms of availability and quality, especially in southern Africa. In the absence of historical observed data, models are generally used to describe the different hydrological processes and generate data and information that will inform management and policy decision making. Ideally, any hydrological model should be based on a sound conceptual understanding of the processes in the basin and be backed by quantitative information for the parameterization of the model. Such data is however, often inadequate in many sub-basins necessitating the incorporation of the uncertainty related to the estimation process. Model parameter estimation and input data are significant sources of uncertainty that should be quantified. Also, in southern Africa water use data are unreliable because available databases consist of licensed information and actual use is generally unknown. In this study, the water resources of two sub-basins of the Limpopo River basin – the Mogalakwena in South Africa and the Shashe shared between Botswana and Zimbabwe – are estimated. The study assessed how uncertainties in the Pitman model parameterisation and input water use data affect the estimation of surface water resources of the selected sub-basins. Farm reservoirs and irrigated areas data from various sources were collected and used to run the Pitman model. Results indicate that the total model output uncertainty is higher for the Shashe sub-basin which is more data scarce than the Mogalakwena sub-basin. The study illustrates the importance of including uncertainty in the water resources assessment process to provide baseline data for decision making in resource management and planning. The study reviews existing information sources associated with the quantification of water balance components and gives an update of water resources of the sub-basin. The flows generated by the model at the outlet of the basin were between 22.6 Mm3 and 24.7 Mm3 per month when incorporating uncertainty to the main physical runoff generating parameters. The total predictive uncertainty of the model increased to between 22.2 Mm3 and 25.0 Mm3 when anthropogenic water use data such as small farm and large reservoirs and irrigation were included. The flows generated for Shashe was between 11.7 Mm3 and 14.5 Mm3 per month when incorporating uncertainty to the main physical runoff generating parameters. The predictive uncertainty of the model changed to 11.7 Mm3 and 17.7 Mm3 after the water use uncertainty was added. However, it is expected that the uncertainty could be reduced by using higher resolution remote sensing imagery.
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  • Date Issued: 2018

Spatial variation in modelled hydrodynamic characteristics associated with valley confinement in the Krom River wetland: implications for the initiation of erosional gullies

  • Authors: Schlegel, Philippa Kirsten
  • Date: 2018
  • Subjects: Soil erosion South Africa Eastern Cape , Wetland management South Africa Kromme River (Eastern Cape) , Wetland conservation South Africa Kromme River (Eastern Cape)
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/58684 , vital:27356
  • Description: Gully erosion is a significant and widespread feature of southern African wetlands, including the wetlands of the Krom River, Eastern Cape. Gully erosion in wetlands is consistently being viewed as a major contributing factor to wetland degradation and eventual collapse. Many gullies exist in the Krom River and Working for Wetlands has spent large sums of money to stabilise head-cuts with the expectation that further erosion would be halted and possibly avoided altogether. Observations in the Krom River wetlands have revealed that most gullies in the wetland are initiated where the width of the trunk valley has been reduced as a consequence of deposition by tributary alluvial fans that impinge on the trunk valley and reduce its width. The aim of this study was to examine variation in hydrodynamic characteristics for a range of discharges, as flow in the broad Kompanjiesdrif basin (~250 meters wide) is confined in a downstream direction to a width of less than 50 meters by a combination of a large impinging left bank tributary alluvial fan that coincides with a resistant bedrock lithology. The study was done by collecting topographical survey data using a Differential Global Positioning System in order to create a Digital Terrain Model with a suitable resolution. Flow was recorded using a Marsh-McBirney Model 2000 Flo-Mate as well as recording the flood extent for each flow condition; this was used in the calibration process of the model. Vegetation measurements were conducted in order to calculate a roughness value across the valley floor. A two-dimensional raster based flood inundation model, CAESAR-Lisflood and a one-dimensional hydraulic analysis model, HEC-RAS, were then used to simulate different parameters associated with variation in discharge, including flow velocity, water depth and stream power, thereby creating a better understanding of the hydraulic characteristics that may promote the formation of gullies in the wetland. Based on these hydraulic analyses it is evident that the effect of impinging alluvial fans on hydraulic characteristics such as flow velocity, water depth and stream power, may lead to the initiation of gullies within the Krom River wetland. This work improves understanding of the collapse of palmiet wetlands in steep-sided valleys within the Cape Fold Mountains of South Africa, and can aid in wetland management.
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  • Date Issued: 2018

Strength and conditioning practices of high school rugby coaches: a South African context

  • Authors: Robinson, Bradley Charles
  • Date: 2018
  • Subjects: Rugby football coaches South Africa , Rugby football Coaching , Rugby football Physiological aspects , Rugby football Training , High school students Social conditions
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63459 , vital:28413
  • Description: Although the sport of rugby union is well established, the strength and conditioning practices of high school level players are not well known. Therefore, the purpose of this study was to examine the current strength and conditioning practices that coaches implement at South African high school level rugby. A secondary purpose was to compare practices between different types of schooling systems available in South Africa. An online survey or in person interview (depending on the school), adapted from previous strength and conditioning questionnaires, was conducted with 43 responses; including 28 schools among the top 100 rugby schools in South Africa for 2016 and 15 no-fee paying public schools in the Eastern Cape Province of South Africa. Results indicated that the top 100 rugby schools implement conditioning practices similar to the best-known international practices compared to no-fee paying schools who lacked the knowledge and skills in various strength and conditioning principles. It was found that all no-fee paying school coaches had insufficient qualifications to administer the correct training techniques. Coaches at all schools lacked the appropriate knowledge on injury prevention and scientifically based training programmes. It was concluded that education and skills around the best strength and conditioning practices for school level coaches needs to be improved and particularly in less privileged schools. The main goal being to reduce the risk of injury and improve performance across all sectors of the rugby playing population within the country. This was deemed crucial to the transformation goals set out by the South African Rugby Union, which would benefit from player development in lower socioeconomic schools.
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  • Date Issued: 2018

Sulphur isotope study of pyrite from the Twangiza-Namoya Gold Belt, (South Kivu, DRC): a proxy of gold provenance

  • Authors: Moloto, Thapelo Refiloe Patience
  • Date: 2018
  • Subjects: Isotope geology -- Congo (Democratic Republic) , Pyrites -- Congo (Democratic Republic) , Gold mines and mining -- Congo (Democratic Republic) , Sulfur -- Isotopes -- Congo (Democratic Republic) , Hydrothermal deposits -- Congo (Democratic Republic) , Twangiza-Namoya Gold Belt, (South Kivu, DRC)
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/60552 , vital:27793
  • Description: Gold in the highly prospective Twangiza-Namoya Gold Belt (TNGB) in the eastern Democratic Republic of Congo (DRC), with its four main deposits at Twangiza, Kamituga, Lugushwa and Namoya, appears to be correlated with the presence of sulphide minerals. Sulphur isotopic compositions of pyrite in the metasedimentary host rocks and in hydrothermal veins are used to identify the possible primary sources of hydrothermal sulphur and, by proxy, hydrothermal gold. The sulphur isotope signatures of the pyrites from the TNGB deposits show an overall range from -18.4%o to +22.6%o. S34 values in host rock pyrite are: -2.2%o to +3.0%o (Twangiza deposit), -4.2%o to -0.6% (Kamituga deposit), -18.4% to -12.7% (Lugushwa deposit), and +12.4% to +22.6% (Namoya deposit). The sulphur isotopic signature of vein pyrite is -5.2% to +3.0% (Twangiza deposit), -9.1% to -7.4% (Kamituga deposit), -0.3% to +3.2% (Lugushwa deposit) and +1.3% to +20.4% (Namoya deposit). The isotopic data indicate a primary sedimentary to evaporitic source of sulphur in the host rock pyrite. Pyrite from metadiorites shows magmatic S isotope compositions. Native gold was found in both sedimentary host rock and vein samples. This indicates that native gold was present in the primary metasedimentary sequence of the TNGB. Some vein pyrites in the TNGB have isotopic signatures that are similar to that of the host rock pyrite. These veins have formed from fluids extracted from the hosting metasedimentary sequence. Conversely, other vein pyrite shows different S34S values compared to the host rock pyrite, suggesting a fluid source that is different from the sedimentary source. Possibly, particularly in the Lugushwa deposit, an igneous source may have released sulphur and possibly gold bearing fluids in addition to those extracted from the sedimentary sequences in the TNGB. However, there is abundant evidence for sulphur and gold mobilised in the sedimentary host rocks and precipitated in the hydrothermal system of the TNGB.
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  • Date Issued: 2018

The development, manufacture and assessment of solid dispersions of gliclazide

  • Authors: Govere, Grace Shalom
  • Date: 2018
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63390 , vital:28405
  • Description: Expected release date-April 2020
  • Full Text:
  • Date Issued: 2018

The development, manufacture and evaluation of a selfmicro-emulsifying drug delivery system for efavirenz

  • Authors: Musakana, Tanyaradzwa Gracious
  • Date: 2018
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/62643 , vital:28223
  • Description: Expected release date-April 2020
  • Full Text:
  • Date Issued: 2018

The effect of water temperature on the distribution of the Eastern Cape redfin minnow, Pseudobarbus afer (Peters, 1864)

  • Authors: Bloy, Lesley Elizabeth
  • Date: 2018
  • Subjects: Minnows -- South Africa -- Eastern Cape , Cyprinidae -- South Africa -- Eastern Cape , Minnows -- Effect of temperature on -- South Africa -- Eastern Cape , Minnows -- Effect of exotic animals on -- South Africa -- Eastern Cape , Introduced organisms -- South Africa -- Eastern Cape
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/62017 , vital:28096
  • Description: The main objective of this MSc study was to disentangle whether temperature or the presence of non-native fish was limiting the distribution of Pseudobarbus afer (Peters, 1864) in the Blindekloof stream, Eastern Cape, South Africa. The aims were to: i) describe the thermal regime of the Blindekloof stream; ii) conduct experiments to determine the preferred and critical temperatures of P. afer and; iii) use snorkel surveys to contextualise the distribution of both native and non-native fishes in the Blindekloof stream to assess whether the downstream distribution of P. afer was likely to be influenced by temperature or by the presence of non-native, predatory fishes. To describe the thermal regime, year-long temperature data from four long term monitoring sites in the Blindekloof stream were collected using Hobo temperature loggers and analysed in order to better understand the thermal profile, the thermal variation and the rate of temperature change in the stream. The warmest temperatures were recorded in late December 2015 (absolute maximum of 29.4 °C). The coolest water temperatures were recorded in early August 2015 (absolute minimum of 9.5 °C). There is both seasonal and diel variation in temperature with mean, minimum, maximum, 7 day mean, 7 day maximum and temperature ranges differing significantly between sites. With knowledge of the thermal regime of a monitored reach of the Blindekloof stream, the thermal tolerance and preference of P. afer were investigated. The thermal tolerance of P. afer was investigated using the Critical Thermal Method (CTM) which uses non-lethal endpoints (the loss of equilibrium). At low acclimatization temperatures (11.9 ± 0.7 °C), the mean CTmax of P. afer was found to be 29.9 ± 0.7 °C, while at a higher acclimatization temperature (19.9 ± 0.1 °C), the mean CTmax was 35.1 ± 0.6°C. Custom-built thermal choice tanks were used to investigate the thermal preference of P. afer in both summer and winter. The preferred median temperatures for the summer experiments ranged from 22.4 - 29.3 °C while the winter preferred median temperatures ranged from 18.5 - 23.1 °C. The thermal tolerance of P. afer was compared to the thermal regime of the stream and the results suggest that temperature is not limiting the distribution of P. afer. Snorkel surveys were used to determine the distribution of fishes in the Blindekloof stream. Analysis of the distribution data suggests that, in the absence of non-native predatory species, native fishes have the potential to inhabit pools throughout the system right to the confluence, thus predatory fishes and not temperature was limiting P. afer distributions.
  • Full Text:
  • Date Issued: 2018

The effects of intermittent task parameters on muscle fatigue development during submaximal dynamic exertions

  • Authors: King, Josephine Claire
  • Date: 2018
  • Subjects: Muscles -- Physiology , Muscles -- Wounds and injuries , Fatigue , Human engineering , Occupational diseases
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63855 , vital:28498
  • Description: The negative effects of localised muscle fatigue on accidents, injuries and poor work performance are well known, as is the realisation that modifying task characteristics can minimise fatigue development. A large amount of literature has investigated the effects of task-dependent factors on localised muscle fatigue, most studies have focussed on prolonged or intermittent static (isometric) exertions. Few studies have investigated muscle fatigue development during more complex tasks, namely those which resemble common work activities and which tend to be intermittent and dynamic in nature. More specifically, the interactions between the main intermittent parameters - duty cycle, force level, and cycle time - during dynamic exertions are poorly understood. The purpose of this study was to investigate the effects of cycle time and combinations of duty cycles and force levels on the development of muscle fatigue during submaximal dynamic exertions while the overall mean muscle load was kept constant. A two-factorial repeated-measures experiment was developed for this study. Nine experimental conditions, each lasting 16 minutes, aimed at inducing muscle fatigue in the middle deltoid muscle via intermittent dynamic shoulder abduction and adduction motions at three cycle times (30, 60, and 120 seconds) and three combinations of duty cycles and force levels. The percentage of muscle activation during one cycle (i.e. the duty cycle) varied depending on the exertion intensity (force level) so that the overall mean muscle load remained consistent throughout all experimental conditions, namely at 20% of maximum force exertion. As a result, the three duty cycle/force level combinations were: 0.8/25% of maximum voluntary force (MVF), 0.5/40%MVF, and 0.4/50%MVF. Muscle fatigue development was inferred by changes in peak torque, total work, average power, local Ratings of Perceived Exertion (RPE), and surface electromyographical (EMG) activity (time domain and frequency domain).Two-factorial analyses of variance with Tukey post-hoc tests were used to identify significant condition effects at p<0.05. All dependent measures showed that muscle fatigue was induced by the 16-minute fatigue protocol. Peak torque, total work, average power, and EMG percentage of maximum showed that cycle time and the duty cycle/force level combination had no effect on the development of muscle fatigue, whereas the measures evaluated during the 16-minute fatigue protocol did. The cycle time of 120 seconds induced the greatest change in six of the eight variables, while the duty cycle/force level combination (0.8/25%) also resulted in the greatest effect in six of the measures. Fatigue was also found to be dependent on the interaction of cycle time and duty cycle/force level combination. The conclusion draws from this study is that shorter cycles and activities with short activation periods, and proportionally longer rest breaks result in the lowest fatigue developments.
  • Full Text:
  • Date Issued: 2018

The evaluation of potential dietary media, measurement parameters and storage techniques for use in forensic entomotoxicology

  • Authors: Mbatha, Erica Isabel Tavares Da Silva
  • Date: 2018
  • Subjects: Blowflies -- Feeding and feeds , Blowflies -- Larvae , Blowflies -- Physiology , Blowflies -- Collection and preservation , Poisons -- Analysis , Death -- Causes , Forensic pathology , Forensic entomology , Forensic entomotoxicology
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63323 , vital:28393
  • Description: The term forensic entomotoxicology was coined by Pounder and is used to describe the process of using insects to determine the presence or absence of toxicants in decomposing corpses. Forensic entomotoxicology is most applicable when the orthodox sources of evidence (i.e. blood and urine) are no longer available for testing due to the degree of putrefaction as a result of the decomposition process. As the field is relatively new, various authors have conducted studies to determine the effects of different toxicants on different insects. These studies have all been conducted in the absence of a standardised protocol and we hypothesise that this has led to conflicting results (i.e. two different authors will conduct a study using the same toxicant and model insect and the effects on the insects will differ significantly). The aim of this thesis was to identify the areas which might have led to the artefacts in the results and identify ways in which to standardise them. The three areas selected were the feeding substrates and the measures taken to quantify growth rate, as well as the preservation techniques that should be used for preserving larval flies. The recommendation from the literature review was that artificial diets would be the most appropriate dietary media to use for entomotoxicological studies. An artificial diet was selected and modified for potential used in entomotoxicological studies. Four different diets (no meat treatment, fish, beef and pork artificial diets) were used to rear Chrysomya chloropyga larvae and their growth rates were measured using length and width. The fly larvae reared on the fish and no meat treatment diets did not reach pupation stage. The beef and pork diets produced the largest larvae and the flies in these treatments reached adult stage. The recommendation was that the beef and pork treatments be tested with various toxicants to establish their stability in the matrix and the diet that provides the toxicants with the most stability should be used for future entomotoxicological studies. The two other factors selected for standardisation were the parameters used to quantify growth rate, as well as the preservation techniques used to store empty Chrysomya chloropyga pupal casings and Calliphora croceipalpis third instar larvae. Previous authors have suggested that width be used as an alternative to length to quantify growth rate. The results from this thesis show that length should continue to be used as the standard parameter because the incremental change in length is much larger than the change in width, and these larger increments allow for greater resolution when estimating the age of the larvae. Various authors have also suggested that pupal casings should be stored without any preservative, whereas fly larvae should be stored in concentrations of ethanol >70%. The results in this thesis have shown that the concentration of ethanol does not make any significant difference to the proportional change of length and width of the empty pupal casings and the third instar larvae. The recommendation is that when selecting the preservation technique, the integrity of the specimen for examination of other evidence (i.e. DNA or toxicological extraction) should take precedence. Although this thesis has not completely standardised the protocol for forensic entomotoxicology, it has indicated the areas that need to be focused on in order for standardisation to occur. Future studies should focus on standardisation, as this makes studies more comparable and ultimately makes entomotoxicological evidence admissible in the court of law.
  • Full Text:
  • Date Issued: 2018

The implementation of a push-pull programme for the control of Eldana saccharina (Lepidoptera: Pyralidae) in sugarcane in the coastal regions of Kwazulu-Natal, South Africa

  • Authors: Mulcahy, Megan Marie
  • Date: 2018
  • Subjects: Pyralidae -- South Africa -- KwaZulu-Natal , Pests -- Integrated control , Sugarcane -- Diseases and pests -- South Africa -- KwaZulu-Natal , Stem borers -- Effect of habitat modification on -- South Africa -- KwaZulu-Natal , Insect-plant relationships -- South Africa -- KwaZulu-Natal
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63290 , vital:28390
  • Description: Eldana saccharina, an indigenous lepidopteran stemborer, is considered the most damaging pest of sugarcane in South Africa. Researchers have advocated the use of an area-wide integrated pest management (AW-IPM) programme as a means of improving the control of this pest. A push-pull strategy was developed as a component of this AW-IPM approach. The push-pull strategy in sugarcane is a habitat management method of pest control that uses plants that are both repellent (Melinis Minutiflora) and attractive (Cyperus dives, Cyperus papyrus and Bt-maize) to E. saccharina. Previous research into push-pull has shown that this strategy is an effective tool for the control of E. saccharina. Push-pull has been implemented successfully in the Midlands North sugarcane growing region of KwaZulu-Natal (KZN), South Africa. Despite the proven efficacy of push-pull, very little push-pull research has been conducted in the coastal sugarcane growing regions of KZN, and adoption of this technology has been poor in these regions. Therefore, the aim of this research was to facilitate the implementation of push-pull for the management of E. saccharina in sugarcane in the coastal regions of KZN. This was done by focussing on on-farm field trials and farmer participatory research. On-farm push-pull field trials were conducted on five model farms in the North and South Coast sugarcane growing regions of KZN. High levels of E. saccharina were recorded during this study. The push-pull treatment sites showed a significant reduction of E. saccharina damage on four of the five farms used in the study. Mean percentage of stalks damaged decreased by up to 50 % in the presence of the repellent grass species, M. minutiflora. The number of E. saccharina found per 100 stalks also decreased significantly at these farms. The farm which did not show a significant reduction in E. saccharina populations or damage had low numbers of this pest in the sugarcane throughout the experiment. This demonstrates that push-pull is more effective in areas that have high levels of E. saccharina. Stem borer surveys in wetlands on sugarcane farms revealed that high numbers of E. saccharina were found within the pull plants, C. papyrus and C. dives, in comparison to the push-pull sites. This verifies that the pull plants do work efficiently to attract E. saccharina away from sugarcane. Additionally, eight parasitoids emerged from E. saccharina larvae collected in wetland sedges. The beneficial roles that push-pull plants play in attracting and maintaining natural enemies in the agroecosystem are discussed, and these findings further demonstrate the important ecosystem, and pest management services that wetlands provide on sugarcane farms. The success of the push-pull trials in this study show that this technology can be an effective tool for controlling E. saccharina in the coastal sugarcane growing regions. The timing of the planting of push-pull plants was shown to play a role in the efficacy of this technology. The study also confirmed that push-pull should be used as a component of AW-IPM in conjunction with good crop management practices. Surveys were undertaken to determine large-scale sugarcane growers' (LSGs) knowledge and perceptions of E. saccharina and other pests. Research regarding the farmers' perceptions of push- pull was also conducted to better understand the drivers and barriers to adoption of push-pull, and other new technologies. The surveys found that large-scale farmers in the coastal regions suffer from high infestations of E. saccharina. As such there is scope for the introduction of new pest management practices such as push-pull in this area. Farmers also demonstrated a good basic knowledge of E. saccharina and IPM. However, LSGs had a poor understanding of push-pull and how it works, as well as the plants that make up the push-pull system that is being implemented against E. saccharina in South Africa. A dearth in practical knowledge regarding the implementation of push-pull was seen as a major barrier to the adoption of this strategy, as was financial instability, farmer attitudes and poor institutional support. Farmers recommended collaboration amongst stakeholders, improved education, proof of the efficacy of push-pull and incentives as tools to improve the implementation of this strategy in the coastal sugarcane growing regions of KZN. Farmers preferred direct contact with extension personnel and experiential learning opportunities when acquiring information about push- pull and other new pest management practices. If opportunities for push-pull education are increased through direct contact with extension personnel, and through on-farm demonstrations, and if inputs are provided in the form of push-pull plants, it is likely that push-pull will succeed amongst coastal LSGs, especially since farmers had an overall positive attitude towards the technology. Surveys amongst small-scale sugarcane growers (SSGs) showed that sugarcane is important in the lives of these farmers. The SSGs perceive pests to be a major constraint to their farming systems, and they identified E. saccharina as a major pest of sugarcane. The farmers also demonstrated good knowledge of sugarcane pests and vegetable pests. However, SSGs lacked knowledge regarding pest management practices and beneficial insects. Extension and advisory services should to continue concentrating on pest management practices to educate SSGs on the variety and application of pest control strategies. SSGs were found to employ complex, diverse and integrated agricultural systems that are well-suited to the implementation of IPM technologies such as push-pull. Since insect pests act were found to be a major constraint to SSG sugarcane production, push-pull was deemed a feasible pest management strategy for coastal farmers and its implementation by SSGs should be further explored. SSGs in this study were also concerned about vegetable pests, therefore if push-pull can be adapted to help protect additional crops, adoption of this technology by small-scale growers will improve.
  • Full Text:
  • Date Issued: 2018

The influence of landscape dis-connectivity on the structure and function of the Krom River, Eastern Cape, South Africa

  • Authors: McNamara, Shaun
  • Date: 2018
  • Subjects: Wetland ecology -- South Africa -- Kromme River (Eastern Cape) , Alluvial fans -- South Africa -- Kromme River (Eastern Cape) , Sedimentation and deposition -- South Africa -- Kromme River (Eastern Cape) , Fluvial geomorphology -- South Africa -- Kromme River (Eastern Cape) , Soil erosion -- South Africa -- Kromme River (Eastern Cape)
  • Language: English
  • Type: text , Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10962/63198 , vital:28380
  • Description: Given that a broad valley and low longitudinal slope are important pre-requisites for wetland formation in dryland environments, it has been proposed that cut-and-fill cycles are largely responsible for the geomorphic evolution of the Krom River valley-bottom wetlands. Research to support this suggestion has focused extensively on the role of phases of incision. As a result, little is known about where sediment mobilised during phases of incision is being deposited (filling phase). This study aimed to address this question to add to the understanding of how cut-and-fill cycles influence the structure and functioning of the Krom River and its wetlands. This was achieved through a reach-scale appraisal of the degree of longitudinal connectivity of the Krom River. The reach used for this appraisal contained an incised section along which the river channel exists as a large gully, and a section immediately downstream of the gully terminus where the Krom River is un-gullied, and flow is diffuse across most of the width of the valley floor. Quantification of the masses of sediment eroded and deposited within the selected reach of the Krom River during a single recent (2012) flood event revealed that the degree of longitudinal connectivity in the Krom River is generally low. During the flood, much of the sediment mobilised by the cutting of the Krom River channel was deposited immediately downstream of the gully terminus, forming a large floodout feature. Particle size analyses of core samples taken along the floodout feature showed that the coarsest fraction of previously mobilised sediment was deposited at the head of the floodout, while finer sediment fractions were deposited progressively further downstream. Field surveys revealed that the pattern of deposition within the floodout feature led to localised steepening of the studied reach of the Krom River downstream of the gully terminus. Surveys of the recently eroded gully revealed that following incision, the eroded stream bed had a lower longitudinal gradient than both the pre-erosional land surface and the regional slope of the Krom River. The results of this study suggest that floodout formation downstream of gullies may promote the transgression of geomorphic thresholds for erosion, such that the development of floodout features leads to likely initiation of new cutting phases in novel locations along the course of the Krom River. They further suggest that the Krom River is capable of intrinsic longitudinal self-recovery through ongoing cut-and-fill cycles. Finally, it would appear that the current cutting phases responsible for the “destruction” of wetlands within the system are part of a cycle that will lead to prolonged geomorphic stability, such that the system is made more suitable for the long-term re-establishment of wetlands.
  • Full Text:
  • Date Issued: 2018
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