Effects of CO2-induced ocean acidification on the early development, growth, survival and skeletogenesis of the estuarine-dependant sciaenid Argyrosomus japonicus
- Authors: Erasmus, Bernard
- Date: 2018
- Subjects: Argyrosomus , Argyrosomus -- Growth , Argyrosomus -- Mortality , Argyrosomus -- Ecology , Argyrosomus -- Physiology , Ocean acidification , Marine ecology -- South Africa , Carbon dioxide -- Physiological effect
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/60585 , vital:27799
- Description: Although it is increasingly accepted that ocean acidification poses a considerable threat to marine organisms, little is known about the likely response of fishes to this phenomenon. While initial research concluded that adult fishes may be tolerant to changes predicted in the next 300 years, the response of early life stages to end-of-century CO2 levels (~ 1100 µatm according to the IPCC RCP 8.5) remains unclear. To date, literature on the early growth and survival of fishes has yielded conflicting results, suggesting that vulnerability may be species dependant. The paucity of ocean acidification research on fishes is particularly evident when one considers larval skeletogenesis, with no robust studies on its impacts on bone and cartilage development. This study addresses the early life embryogenesis, hatching success, growth, skeletogenesis and survival of an estuarine-dependant species. Dusky kob (Argyrosomus japonicus) were reared in a control (pCO2 = 327.50 ± 80.07 qatm at pH 8.15), intermediate (pCO2 477.40 ± 59.46 qatm at pH 8.03) and high pCO2 treatment (pCO2 910.20 ± 136.45 qatm at pH 7.78) from egg to 29 days post-hatch (dph). Sixty individuals from each treatment were sacrificed at the egg stage and at 2, 6, 13, 18, 21 and 26 dph, measured and stained using an acid-free double- staining solution to prevent the deterioration of calcified matrices in fragile larval skeletons. The proportion of bone and cartilage was quantified at each stage using a novel pixel-counting method. Growth and skeletal development were identical between treatments until the onset of metamorphosis (21 dph). However, from the metamorphosis stage, the growth and skeletal development rate was significantly faster in the intermediate treatment and significantly slower in the high treatment when compared to the control treatment. By 26 dph, A. japonicus reared in high pCO2 were, on average, 47.2% smaller than the control treatment, and the relative proportion of bone in the body was 45.3% lower in the high pCO2 treatment when compared with the control. In addition, none of the fish in the high pCO2 treatment survived after 26 dph. It appears that the combination of the increased energy requirements during metamorphosis and the increased energy cost associated with acid-base regulation may account for reduced growth, skeletogenesis and poor survival in high pCO2. Regardless of the driver, the results of this study suggest that the pCO2 levels predicted for the end of the century may have negative effects on the growth, skeletal development, and survival during metamorphosis.
- Full Text:
- Date Issued: 2018
- Authors: Erasmus, Bernard
- Date: 2018
- Subjects: Argyrosomus , Argyrosomus -- Growth , Argyrosomus -- Mortality , Argyrosomus -- Ecology , Argyrosomus -- Physiology , Ocean acidification , Marine ecology -- South Africa , Carbon dioxide -- Physiological effect
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/60585 , vital:27799
- Description: Although it is increasingly accepted that ocean acidification poses a considerable threat to marine organisms, little is known about the likely response of fishes to this phenomenon. While initial research concluded that adult fishes may be tolerant to changes predicted in the next 300 years, the response of early life stages to end-of-century CO2 levels (~ 1100 µatm according to the IPCC RCP 8.5) remains unclear. To date, literature on the early growth and survival of fishes has yielded conflicting results, suggesting that vulnerability may be species dependant. The paucity of ocean acidification research on fishes is particularly evident when one considers larval skeletogenesis, with no robust studies on its impacts on bone and cartilage development. This study addresses the early life embryogenesis, hatching success, growth, skeletogenesis and survival of an estuarine-dependant species. Dusky kob (Argyrosomus japonicus) were reared in a control (pCO2 = 327.50 ± 80.07 qatm at pH 8.15), intermediate (pCO2 477.40 ± 59.46 qatm at pH 8.03) and high pCO2 treatment (pCO2 910.20 ± 136.45 qatm at pH 7.78) from egg to 29 days post-hatch (dph). Sixty individuals from each treatment were sacrificed at the egg stage and at 2, 6, 13, 18, 21 and 26 dph, measured and stained using an acid-free double- staining solution to prevent the deterioration of calcified matrices in fragile larval skeletons. The proportion of bone and cartilage was quantified at each stage using a novel pixel-counting method. Growth and skeletal development were identical between treatments until the onset of metamorphosis (21 dph). However, from the metamorphosis stage, the growth and skeletal development rate was significantly faster in the intermediate treatment and significantly slower in the high treatment when compared to the control treatment. By 26 dph, A. japonicus reared in high pCO2 were, on average, 47.2% smaller than the control treatment, and the relative proportion of bone in the body was 45.3% lower in the high pCO2 treatment when compared with the control. In addition, none of the fish in the high pCO2 treatment survived after 26 dph. It appears that the combination of the increased energy requirements during metamorphosis and the increased energy cost associated with acid-base regulation may account for reduced growth, skeletogenesis and poor survival in high pCO2. Regardless of the driver, the results of this study suggest that the pCO2 levels predicted for the end of the century may have negative effects on the growth, skeletal development, and survival during metamorphosis.
- Full Text:
- Date Issued: 2018
Exploration potential for copperbelt - style mineralisation in NW Province, Zambia; soil geochemistry as a targeting tool
- Authors: Mwamba, John
- Date: 2018
- Subjects: Mineralogy -- Zambia -- Copperbelt Province , River sediments -- Zambia -- Copperbelt Province , Soils -- Sampling -- Zambia -- Copperbelt Province , Prospecting -- Geophysical methods , Landsat satellites , Lufilian fold belt
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62538 , vital:28204
- Description: The NW Province of Zambia is fast becoming a major significant mining district challenging to usurp the economic importance of the traditional Copperbelt Province that has been mined for nearly a century. With latest developments at Kansanshi, Lumwana and Kalumbila mines exploration efforts in the search for Copperbelt style mineralisation have doubled up in the province in recent months. Traditional methods of stream sediment and soil sampling, geophysics, aerial photo and Landsat imagery interpretations have been employed in exploration targeting campaigns. This thesis asks the question: Can we use the Copperbelt geochemical footprint as a proxy to finding new copper deposits in NW Province? The challenge faced in such studies is that few geochemical datasets for old mines exist and the little that does is proprietary information. In some mines this dataset is entirely nonexistent - at least not in the public domain. Attempting to run orientation geochemical trials on such mines is not feasible at present due to maturity of mining and the levels of contamination of the natural environment that have occurred over several decades of mining. However, in tackling this question few Copperbelt geochemical datasets from Baluba, Nkana, Mimbula, Nchanga, Bwana Mkubwa, Mufulira West and Lufubu North were used. The findings presented in this report are that for Copperbelt style mineralisation Cu/Co, Cu/Ni, Cu/Ag ratios in soil geochemistry data should be in the ranges of 0.25 to 0.48 provided geochemical studies occurred in residual soils. These ratios hold true for sediment hosted copper-cobalt mineralisation hosted at various stratigraphic levels within the Roan Group or in upper levels elsewhere on the Central African Copperbelt. Geochemical dataset for the study areas presented in this report show that the soil geochemistry footprint in the province is not dissimilar to the soil geochemistry footprint of the traditional Copperbelt Province. This means there is great potential for finding Copperbelt style mineralisation in the province and other styles of mineralisation in which copper is associated with cobalt, lead, zinc, nickel, vanadium and molybdenum. The areas of study also possess requisite geological factors that are conducive to hosting Copperbelt style deposits. These factors include: favourable structural traps with similar trends to existing mines in the province, geophysical characteristics comparable to other deposits in the province, right geological package known to host multi-type deposits in the Katangan stratigraphic sequence, and similar geochemical footprints observed on other deposits within the Lufilian fold belt. For this reason, geochemical dataset must not be looked at in isolation but should be treated in considerations with other factors and geological environment.
- Full Text:
- Date Issued: 2018
- Authors: Mwamba, John
- Date: 2018
- Subjects: Mineralogy -- Zambia -- Copperbelt Province , River sediments -- Zambia -- Copperbelt Province , Soils -- Sampling -- Zambia -- Copperbelt Province , Prospecting -- Geophysical methods , Landsat satellites , Lufilian fold belt
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62538 , vital:28204
- Description: The NW Province of Zambia is fast becoming a major significant mining district challenging to usurp the economic importance of the traditional Copperbelt Province that has been mined for nearly a century. With latest developments at Kansanshi, Lumwana and Kalumbila mines exploration efforts in the search for Copperbelt style mineralisation have doubled up in the province in recent months. Traditional methods of stream sediment and soil sampling, geophysics, aerial photo and Landsat imagery interpretations have been employed in exploration targeting campaigns. This thesis asks the question: Can we use the Copperbelt geochemical footprint as a proxy to finding new copper deposits in NW Province? The challenge faced in such studies is that few geochemical datasets for old mines exist and the little that does is proprietary information. In some mines this dataset is entirely nonexistent - at least not in the public domain. Attempting to run orientation geochemical trials on such mines is not feasible at present due to maturity of mining and the levels of contamination of the natural environment that have occurred over several decades of mining. However, in tackling this question few Copperbelt geochemical datasets from Baluba, Nkana, Mimbula, Nchanga, Bwana Mkubwa, Mufulira West and Lufubu North were used. The findings presented in this report are that for Copperbelt style mineralisation Cu/Co, Cu/Ni, Cu/Ag ratios in soil geochemistry data should be in the ranges of 0.25 to 0.48 provided geochemical studies occurred in residual soils. These ratios hold true for sediment hosted copper-cobalt mineralisation hosted at various stratigraphic levels within the Roan Group or in upper levels elsewhere on the Central African Copperbelt. Geochemical dataset for the study areas presented in this report show that the soil geochemistry footprint in the province is not dissimilar to the soil geochemistry footprint of the traditional Copperbelt Province. This means there is great potential for finding Copperbelt style mineralisation in the province and other styles of mineralisation in which copper is associated with cobalt, lead, zinc, nickel, vanadium and molybdenum. The areas of study also possess requisite geological factors that are conducive to hosting Copperbelt style deposits. These factors include: favourable structural traps with similar trends to existing mines in the province, geophysical characteristics comparable to other deposits in the province, right geological package known to host multi-type deposits in the Katangan stratigraphic sequence, and similar geochemical footprints observed on other deposits within the Lufilian fold belt. For this reason, geochemical dataset must not be looked at in isolation but should be treated in considerations with other factors and geological environment.
- Full Text:
- Date Issued: 2018
Factors influencing estuarine and coastal connectivity of an estuarine-dependent fishery species, Pomadasys commersonnii (Haemulidae)
- Authors: Dames, Michael Henri
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62307 , vital:28153
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
- Authors: Dames, Michael Henri
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62307 , vital:28153
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
Formulation, characterisation and optimisation of self-nanoemulsifying drug delivery systems (SNEDDS) loaded with artemether and lumefantrine
- Authors: Mudyahoto, Tsitsi
- Date: 2018
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63503 , vital:28422
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
- Authors: Mudyahoto, Tsitsi
- Date: 2018
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63503 , vital:28422
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
Gaining cyber security insight through an analysis of open source intelligence data: an East African case study
- Authors: Chindipha, Stones Dalitso
- Date: 2018
- Subjects: Open source intelligence -- Africa, East , Computer security -- Africa, East , Computer networks -- Security measures -- Africa, East , Denial of service attacks -- Africa, East , Sentient Hvper-Optimised Data Access Network (SHODAN) , Internet Background Radiation (IBR)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/60618 , vital:27805
- Description: With each passing year the number of Internet users and connected devices grows, and this is particularly so in Africa. This growth brings with it an increase in the prevalence cyber-attacks. Looking at the current state of affairs, cybersecurity incidents are more likely to increase in African countries mainly due to the increased prevalence and affordability of broadband connectivity which is coupled with lack of online security awareness. The adoption of mobile banking has aggravated the situation making the continent more attractive to hackers who bank on the malpractices of users. Using Open Source Intelligence (OSINT) data sources like Sentient Hvper-Optimised Data Access Network (SHODAN) and Internet Background Radiation (IBR), this research explores the prevalence of vulnerabilities and their accessibility to evber threat actors. The research focuses on the East African Community (EAC) comprising of Tanzania, Kenya, Malawi, and Uganda, An IBR data set collected by a Rhodes University network telescope spanning over 72 months was used in this research, along with two snapshot period of data from the SHODAN project. The findings shows that there is a significant risk to systems within the EAC, particularly using the SHODAN data. The MITRE CVSS threat scoring system was applied to this research using FREAK and Heartbleed as sample vulnerabilities identified in EAC, When looking at IBR, the research has shown that attackers can use either destination ports or IP source addresses to perform an attack which if not attended to may be reused yearly until later on move to the allocated IP address space once it starts making random probes. The moment it finds one vulnerable client on the network it spreads throughout like a worm, DDoS is one the attacks that can be generated from IBR, Since the SHODAN dataset had two collection points, the study has shown the changes that have occurred in Malawi and Tanzania for a period of 14 months by using three variables i.e, device type, operating systems, and ports. The research has also identified vulnerable devices in all the four countries. Apart from that, the study identified operating systems, products, OpenSSL, ports and ISPs as some of the variables that can be used to identify vulnerabilities in systems. In the ease of OpenSSL and products, this research went further by identifying the type of attack that can occur and its associated CVE-ID.
- Full Text:
- Date Issued: 2018
- Authors: Chindipha, Stones Dalitso
- Date: 2018
- Subjects: Open source intelligence -- Africa, East , Computer security -- Africa, East , Computer networks -- Security measures -- Africa, East , Denial of service attacks -- Africa, East , Sentient Hvper-Optimised Data Access Network (SHODAN) , Internet Background Radiation (IBR)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/60618 , vital:27805
- Description: With each passing year the number of Internet users and connected devices grows, and this is particularly so in Africa. This growth brings with it an increase in the prevalence cyber-attacks. Looking at the current state of affairs, cybersecurity incidents are more likely to increase in African countries mainly due to the increased prevalence and affordability of broadband connectivity which is coupled with lack of online security awareness. The adoption of mobile banking has aggravated the situation making the continent more attractive to hackers who bank on the malpractices of users. Using Open Source Intelligence (OSINT) data sources like Sentient Hvper-Optimised Data Access Network (SHODAN) and Internet Background Radiation (IBR), this research explores the prevalence of vulnerabilities and their accessibility to evber threat actors. The research focuses on the East African Community (EAC) comprising of Tanzania, Kenya, Malawi, and Uganda, An IBR data set collected by a Rhodes University network telescope spanning over 72 months was used in this research, along with two snapshot period of data from the SHODAN project. The findings shows that there is a significant risk to systems within the EAC, particularly using the SHODAN data. The MITRE CVSS threat scoring system was applied to this research using FREAK and Heartbleed as sample vulnerabilities identified in EAC, When looking at IBR, the research has shown that attackers can use either destination ports or IP source addresses to perform an attack which if not attended to may be reused yearly until later on move to the allocated IP address space once it starts making random probes. The moment it finds one vulnerable client on the network it spreads throughout like a worm, DDoS is one the attacks that can be generated from IBR, Since the SHODAN dataset had two collection points, the study has shown the changes that have occurred in Malawi and Tanzania for a period of 14 months by using three variables i.e, device type, operating systems, and ports. The research has also identified vulnerable devices in all the four countries. Apart from that, the study identified operating systems, products, OpenSSL, ports and ISPs as some of the variables that can be used to identify vulnerabilities in systems. In the ease of OpenSSL and products, this research went further by identifying the type of attack that can occur and its associated CVE-ID.
- Full Text:
- Date Issued: 2018
Generalized linear models, with applications in fisheries research
- Authors: Sidumo, Bonelwa
- Date: 2018
- Subjects: Western mosquitofish , Analysis of variance , Fisheries Catch effort South Africa Sundays River (Eastern Cape) , Linear models (Statistics) , Multilevel models (Statistics) , Experimental design
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61102 , vital:27975
- Description: Gambusia affinis (G. affinis) is an invasive fish species found in the Sundays River Valley of the Eastern Cape, South Africa, The relative abundance and population dynamics of G. affinis were quantified in five interconnected impoundments within the Sundays River Valley, This study utilised a G. affinis data set to demonstrate various, classical ANOVA models. Generalized linear models were used to standardize catch per unit effort (CPUE) estimates and to determine environmental variables which influenced the CPUE, Based on the generalized linear model results dam age, mean temperature, Oreochromis mossambicus abundance and Glossogobius callidus abundance had a significant effect on the G. affinis CPUE. The Albany Angling Association collected data during fishing tag and release events. These data were utilized to demonstrate repeated measures designs. Mixed-effects models provided a powerful and flexible tool for analyzing clustered data such as repeated measures data and nested data, lienee it has become tremendously popular as a framework for the analysis of bio-behavioral experiments. The results show that the mixed-effects methods proposed in this study are more efficient than those based on generalized linear models. These data were better modeled with mixed-effects models due to their flexibility in handling missing data.
- Full Text:
- Date Issued: 2018
- Authors: Sidumo, Bonelwa
- Date: 2018
- Subjects: Western mosquitofish , Analysis of variance , Fisheries Catch effort South Africa Sundays River (Eastern Cape) , Linear models (Statistics) , Multilevel models (Statistics) , Experimental design
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61102 , vital:27975
- Description: Gambusia affinis (G. affinis) is an invasive fish species found in the Sundays River Valley of the Eastern Cape, South Africa, The relative abundance and population dynamics of G. affinis were quantified in five interconnected impoundments within the Sundays River Valley, This study utilised a G. affinis data set to demonstrate various, classical ANOVA models. Generalized linear models were used to standardize catch per unit effort (CPUE) estimates and to determine environmental variables which influenced the CPUE, Based on the generalized linear model results dam age, mean temperature, Oreochromis mossambicus abundance and Glossogobius callidus abundance had a significant effect on the G. affinis CPUE. The Albany Angling Association collected data during fishing tag and release events. These data were utilized to demonstrate repeated measures designs. Mixed-effects models provided a powerful and flexible tool for analyzing clustered data such as repeated measures data and nested data, lienee it has become tremendously popular as a framework for the analysis of bio-behavioral experiments. The results show that the mixed-effects methods proposed in this study are more efficient than those based on generalized linear models. These data were better modeled with mixed-effects models due to their flexibility in handling missing data.
- Full Text:
- Date Issued: 2018
Geometry of deformed special relativity
- Authors: Sixaba, Vuyile
- Date: 2018
- Subjects: Special relativity (Physics) , Quantum gravity , Quantum theory , Geometry , Heisenberg uncertainty principle
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59478 , vital:27615
- Description: We undertake a study of the classical regime in which Planck's constant and Newton's gravitational constant are negligible, but not their ratio, the Planck mass, in hopes that this could possibly lead to testable quantum gravity (QG) effects in a classical regime. In this quest for QG phenomenology we consider modifications of the standard dispersion relation of a free particle known as deformed special relativity (DSR). We try to geometrize DSR to find the geometric origin of the spacetime and momentum space. In particular, we adopt the framework of Hamilton geometry which is set up on phase space, as the cotangent bundle of configuration space in order to derive a purely phase space formulation of DSR. This is necessary when one wants to understand potential links of DSR with modifications of quantum mechanics such as Generalised Uncertainty Principles. It is subsequently observed that space-time and momentum space emerge naturally as curved and intertwined spaces. In conclusion we mention examples and applications of this framework as well as potential future developments.
- Full Text:
- Date Issued: 2018
- Authors: Sixaba, Vuyile
- Date: 2018
- Subjects: Special relativity (Physics) , Quantum gravity , Quantum theory , Geometry , Heisenberg uncertainty principle
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59478 , vital:27615
- Description: We undertake a study of the classical regime in which Planck's constant and Newton's gravitational constant are negligible, but not their ratio, the Planck mass, in hopes that this could possibly lead to testable quantum gravity (QG) effects in a classical regime. In this quest for QG phenomenology we consider modifications of the standard dispersion relation of a free particle known as deformed special relativity (DSR). We try to geometrize DSR to find the geometric origin of the spacetime and momentum space. In particular, we adopt the framework of Hamilton geometry which is set up on phase space, as the cotangent bundle of configuration space in order to derive a purely phase space formulation of DSR. This is necessary when one wants to understand potential links of DSR with modifications of quantum mechanics such as Generalised Uncertainty Principles. It is subsequently observed that space-time and momentum space emerge naturally as curved and intertwined spaces. In conclusion we mention examples and applications of this framework as well as potential future developments.
- Full Text:
- Date Issued: 2018
Graphite: origin, deposits and economics : an exploration study of the Orom Graphite project
- Van den Berg, Jacobus Petrus
- Authors: Van den Berg, Jacobus Petrus
- Date: 2018
- Subjects: Graphite , Ore deposits , Geophysics , Graphite mines and mining Economic aspects Africa, East , Trenches , Project management
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63786 , vital:28489
- Description: Developing exploration projects successfully requires that the Reasonable Prospects for Eventual Economic Extraction (RPEEE) be confirmed and based on the global market perception and trend. The exploration methods applied in the attempt to establish this RPEEE must be based on a key management framework that assures the results, and eventually the conclusion, are obtained with best practical and technical approaches whilst managing the risks and capitalizing on each result. The Orom Graphite project is located within the East African Orogenic belt, a suture zone between the Congo craton and the SLAMIN shield, formed during the formation of Gondwana during the late Proterozoic to early-Phanerozoic era. The closing of the Mozambique ocean, and the eventual collision between the craton and shield, occurred along the paleo-earths equator and migrated towards lower latitudes. This, along with the period’s biodiversity boom, provided the perfect deposition environment for carbonaceous sediments which were later metamorphosed to amphibolite and granulites grade metamorphism, resulting in the carbonization and the eventual graphitization of these carbonaceous sediments. The project is located within a poorly developed part of Uganda with the closest port situated some 1 500 km to the east in Kenya. The poorly developed infrastructure along with probable high logistical cost assigns a low competitivity index if compared to the economic costs of peer projects. However, the potential resources of the Orom Graphite project suggest that the Life of Mine (LOM) can rival the largest resource currently reported within the market. The current market conditions suggest that a possible oversupply of graphite concentrate will dominate the market within the next 4 to 10 years. This suggests that new graphite projects such as the Orom Graphite project are likely to develop into the production phase once the global supply and demand stabilize. This requires the Orom Graphite project to develop from its current scoping study level to a project development study level associated with a definitive feasibility study. To date, the project developed through mapping, reconnaissance drilling, geophysical survey and trenching programs increasing the Net Present Value (NPV) considerably based upon a Cost-Based Valuation approach using Prospectivity Enhancement Multiplier (PEM). The metallurgical studies could however not produce a graphite concentrate product within industrial grade standards. The risk associated with developing the project further into the Mineral Resource Estimation (MRE) phase was quantified and risk was evaluated by implementing a point decision tree and calculating the Expected Monetary Value (EMV). Due to the unfavourable metallurgical results obtained to date, the risk associated with undertaking an additional metallurgical test is considerable with a slight chance of producing a negative project value estimated at 65%. JP van den Berg Rhodes University Overall, the Orom Graphite project contains favourable geological formations with a potential large resource. Market trends indicate that a considerable resource is currently being developed and can supply the global market for the next 4 to 10 years. The project’s location within a landlocked country decreases its economic competitiveness with peer project and the unfavourable, but not conclusive, metallurgical results obtained during the scoping phase do not instil confidence that the project will develop into a productive mine soon. Managing the project development with future graphite demand in mind is the key to determining whether the project still has future value.
- Full Text:
- Date Issued: 2018
- Authors: Van den Berg, Jacobus Petrus
- Date: 2018
- Subjects: Graphite , Ore deposits , Geophysics , Graphite mines and mining Economic aspects Africa, East , Trenches , Project management
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63786 , vital:28489
- Description: Developing exploration projects successfully requires that the Reasonable Prospects for Eventual Economic Extraction (RPEEE) be confirmed and based on the global market perception and trend. The exploration methods applied in the attempt to establish this RPEEE must be based on a key management framework that assures the results, and eventually the conclusion, are obtained with best practical and technical approaches whilst managing the risks and capitalizing on each result. The Orom Graphite project is located within the East African Orogenic belt, a suture zone between the Congo craton and the SLAMIN shield, formed during the formation of Gondwana during the late Proterozoic to early-Phanerozoic era. The closing of the Mozambique ocean, and the eventual collision between the craton and shield, occurred along the paleo-earths equator and migrated towards lower latitudes. This, along with the period’s biodiversity boom, provided the perfect deposition environment for carbonaceous sediments which were later metamorphosed to amphibolite and granulites grade metamorphism, resulting in the carbonization and the eventual graphitization of these carbonaceous sediments. The project is located within a poorly developed part of Uganda with the closest port situated some 1 500 km to the east in Kenya. The poorly developed infrastructure along with probable high logistical cost assigns a low competitivity index if compared to the economic costs of peer projects. However, the potential resources of the Orom Graphite project suggest that the Life of Mine (LOM) can rival the largest resource currently reported within the market. The current market conditions suggest that a possible oversupply of graphite concentrate will dominate the market within the next 4 to 10 years. This suggests that new graphite projects such as the Orom Graphite project are likely to develop into the production phase once the global supply and demand stabilize. This requires the Orom Graphite project to develop from its current scoping study level to a project development study level associated with a definitive feasibility study. To date, the project developed through mapping, reconnaissance drilling, geophysical survey and trenching programs increasing the Net Present Value (NPV) considerably based upon a Cost-Based Valuation approach using Prospectivity Enhancement Multiplier (PEM). The metallurgical studies could however not produce a graphite concentrate product within industrial grade standards. The risk associated with developing the project further into the Mineral Resource Estimation (MRE) phase was quantified and risk was evaluated by implementing a point decision tree and calculating the Expected Monetary Value (EMV). Due to the unfavourable metallurgical results obtained to date, the risk associated with undertaking an additional metallurgical test is considerable with a slight chance of producing a negative project value estimated at 65%. JP van den Berg Rhodes University Overall, the Orom Graphite project contains favourable geological formations with a potential large resource. Market trends indicate that a considerable resource is currently being developed and can supply the global market for the next 4 to 10 years. The project’s location within a landlocked country decreases its economic competitiveness with peer project and the unfavourable, but not conclusive, metallurgical results obtained during the scoping phase do not instil confidence that the project will develop into a productive mine soon. Managing the project development with future graphite demand in mind is the key to determining whether the project still has future value.
- Full Text:
- Date Issued: 2018
Guest inclusion behaviour of zirconium(IV)- based polycarboxylate complexes: a study of metal-organic frameworks
- Hulushe, Siyabonga Theophillus
- Authors: Hulushe, Siyabonga Theophillus
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63710 , vital:28474
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
- Authors: Hulushe, Siyabonga Theophillus
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63710 , vital:28474
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
Health and fitness of young, healthy adult females and the effect of an eight week pilates intervention
- Authors: Eaton, Lara Lee
- Date: 2018
- Subjects: Physical fitness for women -- South Africa -- Makhanda , Pilates method , Exercise for women -- South Africa -- Makhanda , Exercise -- Health aspects -- South Africa -- Makhanda , Exercise -- Physiological aspects -- South Africa -- Makhanda
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/58267 , vital:27112
- Description: Purpose: The first phase of this study aimed to investigate the health and fitness status of young adult females in the local community. The second phase of this study investigated the impact of an eight week progressive Pilates intervention on selected health and fitness parameters in this cohort. Methods: Healthy young adult females aged 18-26 years (n=96), from the local community, partook in once-off tests including anthropometric measures (stature, body mass, Body Mass Index and waist circumference) as well as fitness parameters including balance, flexibility, muscular strength and endurance, and lastly lumbo-pelvic stability. Health measures investigated included blood pressure and spirometry. Where possible, results were compared to those of similar populations from national surveys or published normative data. Sedentary volunteers from this cohort were then randomised into a Pilates Exercise (PEx, n=12) or an inactive Control (Con, n=11) group, with their results from Phase 1 serving as baseline measures. Pilates classes were held twice weekly (60 minutes per session). All the measures from phase 1 were repeated at weeks 4 and 8. An additional intervention test included Transversus abdominis recruitment. Participants maintained habitual dietary intake and energy expenditure throughout. Nine PEx group and eight Con group participants completed the intervention. Results: The current sample (phase 1) was found to be healthier than comparative populations from national surveys, and significant differences (p<0.05) were found for all comparisons except Forced Expiratory Volume (FEV1), (p=0.64). Physical activity levels (230 min.week-1) exceeded that of the recommend weekly threshold (150 min.week-1). BMI, waist circumference, blood pressure and spirometry measures were all found to be within suggested healthy normal ranges. Pilates significantly improved lumbo-pelvic stability in the PEx group at weeks 4 (p<0.005) and 8 (p<0.002). Similarly, abdominal (p=0.00, d=1.1), upper limb (p=0.037, d=0.9) and lower limb endurance (p=0.02, d=1.0, between group d=0.73 for PEx) also improved with no changes in the Con group. PEx energy expenditure significantly increased from baseline to weeks 4 (p=0.007, d=10.7) and 8 (p=0.027, d=0.64), however body mass was maintained throughout. Conversely, Minute Ventilation decreased in the PEx cohort (p=0.010, d=0.95) from weeks 4 to 8. The Con group showed significant increases in body mass (p=0.018), leg strength (within-group Cohen’s d=-1.08 between weeks 0-8; d=-2 between weeks 4-8) and dynamic balance (p=0.01, d=-0.5). While no within-group changes were observed, Protein intake was significantly greater (p=0.036, d>0.8 at baseline and week 8) in the PEx group throughout the intervention. Medium between-group effect sizes (d>0.5) were noted for PEx BMI and waist circumference measures at all time points. Further, although not significant, the large within-group effect size (d=-0.84) between baseline and week 8 for PEx systolic blood pressure, suggested the 9 mm Hg was meaningful. The same time period also indicated a large within-group effect size (d=-0.8) for PEx dynamic balance, and a medium Cohen’s d for (d=0.57) PEx static balance. Conclusion: The local population of young adult females was found to be significantly healthier than those of comparable national samples. Further, Pilates participation significantly improved lumbo-pelvic stability and muscular endurance with meaningful changes in systolic blood pressure, and balance in previously sedentary young, adult females. Body mass was also maintained.
- Full Text:
- Date Issued: 2018
- Authors: Eaton, Lara Lee
- Date: 2018
- Subjects: Physical fitness for women -- South Africa -- Makhanda , Pilates method , Exercise for women -- South Africa -- Makhanda , Exercise -- Health aspects -- South Africa -- Makhanda , Exercise -- Physiological aspects -- South Africa -- Makhanda
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/58267 , vital:27112
- Description: Purpose: The first phase of this study aimed to investigate the health and fitness status of young adult females in the local community. The second phase of this study investigated the impact of an eight week progressive Pilates intervention on selected health and fitness parameters in this cohort. Methods: Healthy young adult females aged 18-26 years (n=96), from the local community, partook in once-off tests including anthropometric measures (stature, body mass, Body Mass Index and waist circumference) as well as fitness parameters including balance, flexibility, muscular strength and endurance, and lastly lumbo-pelvic stability. Health measures investigated included blood pressure and spirometry. Where possible, results were compared to those of similar populations from national surveys or published normative data. Sedentary volunteers from this cohort were then randomised into a Pilates Exercise (PEx, n=12) or an inactive Control (Con, n=11) group, with their results from Phase 1 serving as baseline measures. Pilates classes were held twice weekly (60 minutes per session). All the measures from phase 1 were repeated at weeks 4 and 8. An additional intervention test included Transversus abdominis recruitment. Participants maintained habitual dietary intake and energy expenditure throughout. Nine PEx group and eight Con group participants completed the intervention. Results: The current sample (phase 1) was found to be healthier than comparative populations from national surveys, and significant differences (p<0.05) were found for all comparisons except Forced Expiratory Volume (FEV1), (p=0.64). Physical activity levels (230 min.week-1) exceeded that of the recommend weekly threshold (150 min.week-1). BMI, waist circumference, blood pressure and spirometry measures were all found to be within suggested healthy normal ranges. Pilates significantly improved lumbo-pelvic stability in the PEx group at weeks 4 (p<0.005) and 8 (p<0.002). Similarly, abdominal (p=0.00, d=1.1), upper limb (p=0.037, d=0.9) and lower limb endurance (p=0.02, d=1.0, between group d=0.73 for PEx) also improved with no changes in the Con group. PEx energy expenditure significantly increased from baseline to weeks 4 (p=0.007, d=10.7) and 8 (p=0.027, d=0.64), however body mass was maintained throughout. Conversely, Minute Ventilation decreased in the PEx cohort (p=0.010, d=0.95) from weeks 4 to 8. The Con group showed significant increases in body mass (p=0.018), leg strength (within-group Cohen’s d=-1.08 between weeks 0-8; d=-2 between weeks 4-8) and dynamic balance (p=0.01, d=-0.5). While no within-group changes were observed, Protein intake was significantly greater (p=0.036, d>0.8 at baseline and week 8) in the PEx group throughout the intervention. Medium between-group effect sizes (d>0.5) were noted for PEx BMI and waist circumference measures at all time points. Further, although not significant, the large within-group effect size (d=-0.84) between baseline and week 8 for PEx systolic blood pressure, suggested the 9 mm Hg was meaningful. The same time period also indicated a large within-group effect size (d=-0.8) for PEx dynamic balance, and a medium Cohen’s d for (d=0.57) PEx static balance. Conclusion: The local population of young adult females was found to be significantly healthier than those of comparable national samples. Further, Pilates participation significantly improved lumbo-pelvic stability and muscular endurance with meaningful changes in systolic blood pressure, and balance in previously sedentary young, adult females. Body mass was also maintained.
- Full Text:
- Date Issued: 2018
In silico characterization of plasmodial transketolases as potential malaria drug target
- Authors: Boateng, Rita Afriyie
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63540 , vital:28433
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
- Authors: Boateng, Rita Afriyie
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63540 , vital:28433
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
In silico study of Plasmodium 1-deoxy-dxylulose 5-phosphate reductoisomerase (DXR) for identification of novel inhibitors from SANCDB
- Authors: Diallo, Bakary N'tji
- Date: 2018
- Subjects: Plasmodium 1-deoxy-dxylulose 5-phosphate reductoisomerase , Isoprenoids , Plasmodium , Antimalarials , Malaria -- Chemotherapy , Molecules -- Models , Molecular dynamics , South African Natural Compounds Database
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/64012 , vital:28523
- Description: Malaria remains a major health concern with a complex parasite constantly developing resistance to the different drugs introduced to treat it, threatening the efficacy of the current ACT treatment recommended by WHO (World Health Organization). Different antimalarial compounds with different mechanisms of action are ideal as this decreases chances of resistance occurring. Inhibiting DXR and consequently the MEP pathway is a good strategy to find a new antimalarial with a novel mode of action. From literature, all the enzymes of the MEP pathway have also been shown to be indispensable for the synthesis of isoprenoids. They have been validated as drug targets and the X-ray structure of each of the enzymes has been solved. DXR is a protein which catalyses the second step of the MEP pathway. There are currently 255 DXR inhibitors in the Binding Database (accessed November 2017) generally based on the fosmidomycin structural scaffold and thus often showing poor drug likeness properties. This study aims to research new DXR inhibitors using in silico techniques. We analysed the protein sequence and built 3D models in close and open conformations for the different Plasmodium sequences. Then SANCDB compounds were screened to identify new potential DXR inhibitors with new chemical scaffolds. Finally, the identified hits were submitted to molecular dynamics studies, preceded by a parameterization of the manganese atom in the protein active site.
- Full Text:
- Date Issued: 2018
- Authors: Diallo, Bakary N'tji
- Date: 2018
- Subjects: Plasmodium 1-deoxy-dxylulose 5-phosphate reductoisomerase , Isoprenoids , Plasmodium , Antimalarials , Malaria -- Chemotherapy , Molecules -- Models , Molecular dynamics , South African Natural Compounds Database
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/64012 , vital:28523
- Description: Malaria remains a major health concern with a complex parasite constantly developing resistance to the different drugs introduced to treat it, threatening the efficacy of the current ACT treatment recommended by WHO (World Health Organization). Different antimalarial compounds with different mechanisms of action are ideal as this decreases chances of resistance occurring. Inhibiting DXR and consequently the MEP pathway is a good strategy to find a new antimalarial with a novel mode of action. From literature, all the enzymes of the MEP pathway have also been shown to be indispensable for the synthesis of isoprenoids. They have been validated as drug targets and the X-ray structure of each of the enzymes has been solved. DXR is a protein which catalyses the second step of the MEP pathway. There are currently 255 DXR inhibitors in the Binding Database (accessed November 2017) generally based on the fosmidomycin structural scaffold and thus often showing poor drug likeness properties. This study aims to research new DXR inhibitors using in silico techniques. We analysed the protein sequence and built 3D models in close and open conformations for the different Plasmodium sequences. Then SANCDB compounds were screened to identify new potential DXR inhibitors with new chemical scaffolds. Finally, the identified hits were submitted to molecular dynamics studies, preceded by a parameterization of the manganese atom in the protein active site.
- Full Text:
- Date Issued: 2018
Influence of knowledge of the end-point on pacing during a 2000m rowing time trial
- Authors: Ferreira, Dean
- Date: 2018
- Subjects: Rowing -- Training , Rowing -- Coaching , Endurance sports -- Training , Rowers -- Ability testing , Rowing -- Training -- Psychological aspects
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61636 , vital:28044
- Description: Introduction: A typical 2000 m rowing race requires maximal force production over six to eight minutes. Optimal distribution of energetic resources during such a race is vital for optimal performance. There is little research examining the pacing strategies employed by rowers, particularly at the sub-elite level. Aim: The purpose of this investigation was to determine the influence of knowledge of the end-point on pacing during a 2000 m rowing time trial. Methods: Eleven male rowers from a university rowing club volunteered to partake in the study. Each participant completed three experimental trials on an indoor rowing ergometer, each 2000 m. The only difference between the trials was the nature of the information provided beforehand. At the start of the control trial, participants were correctly informed about the distance to be covered. Participants were not informed of the distance to be completed in the unknown trial. For the deceptive trial, participants were told 1000 m would be completed, but when this distance was reached, they were told to continue for another 1000 m. During each trial muscle activity, power output, heart rate, performance time and perceptions of effort were measured.Results: The control trial was significantly (p<0.05) faster than both the unknown and deceptive trials, however the deceptive trial was the fastest of all trials at the 1000 m distance. The unknown trial was slowest at 1000 m and at 2000 m. Muscle activity, RPE, heart rate and power output were significantly (p<0.05) lower in the unknown trial compared to the control and deceptive trial. The control trial exhibited a reverse J-shape pacing profile. The deceptive trial revealed a significant (p<0.05) reduction in performance time, heart rate, power output and muscle activity after the 1000 m interval. The first 500 m interval had the fastest performance and highest power output in all trials. In all trials, RPE was highest at the end of the 2000 m, the greatest reading being obtained at the end of the control trial. During the first 1000 m of the deceptive trial, the dependant variables were similar to those in the control trial. Once the deception was revealed, there was a significant (p<0.05) reduction in the muscle activity, heart rate and power output. Conclusion: The results of this study indicate that accurate end-point information is crucial to the development of an optimal pacing strategy, and ultimately to successful performance. Rowers tend to adopt the reverse J-shape pacing profile most often due to the tactical and physiological benefits offered by this strategy. Unknown or inaccurate end-point information resulted in performance decrements due to the uncertainty associated with the exercise bout.
- Full Text:
- Date Issued: 2018
- Authors: Ferreira, Dean
- Date: 2018
- Subjects: Rowing -- Training , Rowing -- Coaching , Endurance sports -- Training , Rowers -- Ability testing , Rowing -- Training -- Psychological aspects
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61636 , vital:28044
- Description: Introduction: A typical 2000 m rowing race requires maximal force production over six to eight minutes. Optimal distribution of energetic resources during such a race is vital for optimal performance. There is little research examining the pacing strategies employed by rowers, particularly at the sub-elite level. Aim: The purpose of this investigation was to determine the influence of knowledge of the end-point on pacing during a 2000 m rowing time trial. Methods: Eleven male rowers from a university rowing club volunteered to partake in the study. Each participant completed three experimental trials on an indoor rowing ergometer, each 2000 m. The only difference between the trials was the nature of the information provided beforehand. At the start of the control trial, participants were correctly informed about the distance to be covered. Participants were not informed of the distance to be completed in the unknown trial. For the deceptive trial, participants were told 1000 m would be completed, but when this distance was reached, they were told to continue for another 1000 m. During each trial muscle activity, power output, heart rate, performance time and perceptions of effort were measured.Results: The control trial was significantly (p<0.05) faster than both the unknown and deceptive trials, however the deceptive trial was the fastest of all trials at the 1000 m distance. The unknown trial was slowest at 1000 m and at 2000 m. Muscle activity, RPE, heart rate and power output were significantly (p<0.05) lower in the unknown trial compared to the control and deceptive trial. The control trial exhibited a reverse J-shape pacing profile. The deceptive trial revealed a significant (p<0.05) reduction in performance time, heart rate, power output and muscle activity after the 1000 m interval. The first 500 m interval had the fastest performance and highest power output in all trials. In all trials, RPE was highest at the end of the 2000 m, the greatest reading being obtained at the end of the control trial. During the first 1000 m of the deceptive trial, the dependant variables were similar to those in the control trial. Once the deception was revealed, there was a significant (p<0.05) reduction in the muscle activity, heart rate and power output. Conclusion: The results of this study indicate that accurate end-point information is crucial to the development of an optimal pacing strategy, and ultimately to successful performance. Rowers tend to adopt the reverse J-shape pacing profile most often due to the tactical and physiological benefits offered by this strategy. Unknown or inaccurate end-point information resulted in performance decrements due to the uncertainty associated with the exercise bout.
- Full Text:
- Date Issued: 2018
Interactions between three biological control agents of water hyacinth, Eichhornia crassipes (Mart.) Solms (Pontederiaceae) in South Africa
- Authors: Petela, Nomvume
- Date: 2018
- Subjects: Water hyacinth -- South Africa , Water hyacinth -- Biological control -- South Africa , Aquatic weeds -- Biological control -- South Africa , Curculionidae , Delphacidae , Miridae , Neochetina eichhorniae Warner , Megamelus scutellaris Berg , Eccritotarsus eichhorniae Henry
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/60676 , vital:27814
- Description: Water hyacinth, Eichhomia crassipes (Mart.) Solms (Pontederiaceae) is a free-floating perennial weed that is regarded as the worst aquatic weed in the world because of its negative impacts on aquatic ecosystems. It is native to the Amazon Basin of South America, but since the late 1800s has spread throughout the world. The first record of the weed in South Africa was noted in 1908 on the Cape Flats and in KwaZulu-Natal, but it is now dispersed throughout the country. Mechanical and chemical control methods have been used against the weed, but biological control is considered the most cost-effective, sustainable and environmentally friendly intervention. Currently, nine biological control agents have been released against water hyacinth in South Africa, and Neochetina eichhorniae Warner (Coleoptera: Curculionidae) is used most widely to control it. However, in some sites, water hyacinth mats have still not been brought under control because of eutrophic waters and cool temperatures. It was therefore necessary to release new biological control agents to complement the impact of N. eichhorniae. Megamelus scutellaris Berg (Hemiptera: Delphacidae) was released in 2013, but little is known about how it interacts with other agents already present in South Africa. It is likely to compete with the established biological control agent, Eccritotarsus eichhorniae Henry (Heteroptera: Miridae), because they are both sap suckers. On the other hand, N. eichhorniae is the most widespread and thus the most important biological control agent for water hyacinth. The aim of this study, then, was to determine the interactions between the two sap-sucking agents in South Africa that presumably occupy similar niches on the plant, and the interaction between M. scutellerais and N. eichhorniae, the most widely distributed and abundant agent in South Africa. Three experiments were conducted at the Waainek Research Facility at Rhodes University, Grahamstown, Eastern Cape, South Africa. Plants were grown for two weeks and insect species were inoculated singly or in combination. Water hyacinth, plant growth parameters and insect parameters were measured every 14 days for a period of 12 weeks. The results of the study showed that feeding by either E. eichhorniae or M. scutellaris had no effect on the feeding of the other agent. Both agents reduced all the measured plant growth parameters equally, either singly or in combination (i.e. E. eichhorniae or M. scutellaris alone or together). The interaction between the two agents appears neutral and agents are likely to complement each other in the field. Prior feeding by E. eichhorniae or M. scutellaris on water hyacinth did not affect the subsequent feeding by either agent. Megamelus scutellaris prefers healthy fresh water hyacinth plants. In addition, planthoppers performed best in combination with the weevil, especially on plants with new weevil feeding scars. The results of the study showed that M. scutellaris is compatible with other biological control agents of water hyacinth that are already established in South Africa. Therefore, the introduction of M. scutellaris may enhance the biological control of water hyacinth in South Africa.
- Full Text:
- Date Issued: 2018
- Authors: Petela, Nomvume
- Date: 2018
- Subjects: Water hyacinth -- South Africa , Water hyacinth -- Biological control -- South Africa , Aquatic weeds -- Biological control -- South Africa , Curculionidae , Delphacidae , Miridae , Neochetina eichhorniae Warner , Megamelus scutellaris Berg , Eccritotarsus eichhorniae Henry
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/60676 , vital:27814
- Description: Water hyacinth, Eichhomia crassipes (Mart.) Solms (Pontederiaceae) is a free-floating perennial weed that is regarded as the worst aquatic weed in the world because of its negative impacts on aquatic ecosystems. It is native to the Amazon Basin of South America, but since the late 1800s has spread throughout the world. The first record of the weed in South Africa was noted in 1908 on the Cape Flats and in KwaZulu-Natal, but it is now dispersed throughout the country. Mechanical and chemical control methods have been used against the weed, but biological control is considered the most cost-effective, sustainable and environmentally friendly intervention. Currently, nine biological control agents have been released against water hyacinth in South Africa, and Neochetina eichhorniae Warner (Coleoptera: Curculionidae) is used most widely to control it. However, in some sites, water hyacinth mats have still not been brought under control because of eutrophic waters and cool temperatures. It was therefore necessary to release new biological control agents to complement the impact of N. eichhorniae. Megamelus scutellaris Berg (Hemiptera: Delphacidae) was released in 2013, but little is known about how it interacts with other agents already present in South Africa. It is likely to compete with the established biological control agent, Eccritotarsus eichhorniae Henry (Heteroptera: Miridae), because they are both sap suckers. On the other hand, N. eichhorniae is the most widespread and thus the most important biological control agent for water hyacinth. The aim of this study, then, was to determine the interactions between the two sap-sucking agents in South Africa that presumably occupy similar niches on the plant, and the interaction between M. scutellerais and N. eichhorniae, the most widely distributed and abundant agent in South Africa. Three experiments were conducted at the Waainek Research Facility at Rhodes University, Grahamstown, Eastern Cape, South Africa. Plants were grown for two weeks and insect species were inoculated singly or in combination. Water hyacinth, plant growth parameters and insect parameters were measured every 14 days for a period of 12 weeks. The results of the study showed that feeding by either E. eichhorniae or M. scutellaris had no effect on the feeding of the other agent. Both agents reduced all the measured plant growth parameters equally, either singly or in combination (i.e. E. eichhorniae or M. scutellaris alone or together). The interaction between the two agents appears neutral and agents are likely to complement each other in the field. Prior feeding by E. eichhorniae or M. scutellaris on water hyacinth did not affect the subsequent feeding by either agent. Megamelus scutellaris prefers healthy fresh water hyacinth plants. In addition, planthoppers performed best in combination with the weevil, especially on plants with new weevil feeding scars. The results of the study showed that M. scutellaris is compatible with other biological control agents of water hyacinth that are already established in South Africa. Therefore, the introduction of M. scutellaris may enhance the biological control of water hyacinth in South Africa.
- Full Text:
- Date Issued: 2018
Investigating the influence of ring substitution on indole hydrogen bonding, with amino acids
- Authors: Nel, Donovan
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63509 , vital:28426
- Description: Expected release date-April 2019
- Full Text: false
- Date Issued: 2018
- Authors: Nel, Donovan
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63509 , vital:28426
- Description: Expected release date-April 2019
- Full Text: false
- Date Issued: 2018
Investigating the viability and performance of a pilot scale Fly Ash/Lime Filter Tower (FLFT) for greywater treatment and the fate of Triclosan post treatment
- Authors: Nondlazi, Sinoyolo
- Date: 2018
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63704 , vital:28473
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
- Authors: Nondlazi, Sinoyolo
- Date: 2018
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63704 , vital:28473
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
Investigating thermal physiology as a tool to improve the release efficacy of insect biological control agents
- Authors: Griffith, Tamzin Camilla
- Date: 2018
- Subjects: Aquatic weeds -- Biological control , Water hyacinth -- Biological control , Insects -- Physiology , Miridae -- Effect of low temperatures on , Cold adaptation , Insects as biological pest control agents , Eccritotarsus catarinensis
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63301 , vital:28391
- Description: Biological control is commonly used for the control of invasive aquatic weeds, which often involves the release of multiple host-specific agents. Releasing multiple agents has inherent safety concerns as the introduction of each new agent is associated with risks, but is often required to improve control where establishment is limited. Climatic incompatibility between the agent’s thermal physiology and its introduced range often causes agents to fail to establish. However, it has been suggested that the thermal physiology of insects is plastic. Therefore, the potential to manipulate their thermal physiologies before releasing them into the field needs to be explored; reducing the need to release additional agents, thereby ensuring the safety of biological control. This thesis therefore aimed to firstly, determine whether season and locality influenced the thermal physiology of two field populations of a water hyacinth (Eichhornia crassipes) control agent, the mirid Eccritotarsus catarinensis; one collected from the hottest establishment site, and one collected from the coldest establishment site in South Africa. Their thermal physiology was significantly influenced by season and not by the sites’ climate, suggesting their thermal physiology is plastic under field conditions. Secondly, the classical method of determining the lower critical thermal limit (CTmin), and a new respirometry method of determining this limit, compared the thermal physiology of two Eccritotarsus species reared in quarantine. Eccritotarsus catarinensis was significantly more cold tolerant than the more recently released Eccritotarsus eichhorniae, despite similar maintenance conditions, and as such, was used to establish whether cold hardening under laboratory conditions was possible. Successfully cold hardened E. catarinensis had a significantly lower CTmin compared to the field cold acclimated population, suggesting that cold hardening of agents could be conducted before release to improve their cold tolerance and increase their chances of establishment, allowing for further adaptation to colder climates in the field to occur. Increasing establishment of the most effective agents will decrease the number of agents needed in a biological control programme, thus encouraging a more parsimonious approach to biological control.
- Full Text:
- Date Issued: 2018
- Authors: Griffith, Tamzin Camilla
- Date: 2018
- Subjects: Aquatic weeds -- Biological control , Water hyacinth -- Biological control , Insects -- Physiology , Miridae -- Effect of low temperatures on , Cold adaptation , Insects as biological pest control agents , Eccritotarsus catarinensis
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63301 , vital:28391
- Description: Biological control is commonly used for the control of invasive aquatic weeds, which often involves the release of multiple host-specific agents. Releasing multiple agents has inherent safety concerns as the introduction of each new agent is associated with risks, but is often required to improve control where establishment is limited. Climatic incompatibility between the agent’s thermal physiology and its introduced range often causes agents to fail to establish. However, it has been suggested that the thermal physiology of insects is plastic. Therefore, the potential to manipulate their thermal physiologies before releasing them into the field needs to be explored; reducing the need to release additional agents, thereby ensuring the safety of biological control. This thesis therefore aimed to firstly, determine whether season and locality influenced the thermal physiology of two field populations of a water hyacinth (Eichhornia crassipes) control agent, the mirid Eccritotarsus catarinensis; one collected from the hottest establishment site, and one collected from the coldest establishment site in South Africa. Their thermal physiology was significantly influenced by season and not by the sites’ climate, suggesting their thermal physiology is plastic under field conditions. Secondly, the classical method of determining the lower critical thermal limit (CTmin), and a new respirometry method of determining this limit, compared the thermal physiology of two Eccritotarsus species reared in quarantine. Eccritotarsus catarinensis was significantly more cold tolerant than the more recently released Eccritotarsus eichhorniae, despite similar maintenance conditions, and as such, was used to establish whether cold hardening under laboratory conditions was possible. Successfully cold hardened E. catarinensis had a significantly lower CTmin compared to the field cold acclimated population, suggesting that cold hardening of agents could be conducted before release to improve their cold tolerance and increase their chances of establishment, allowing for further adaptation to colder climates in the field to occur. Increasing establishment of the most effective agents will decrease the number of agents needed in a biological control programme, thus encouraging a more parsimonious approach to biological control.
- Full Text:
- Date Issued: 2018
Isolation, identification and genetic characterisation of a microsporidium isolated from the carob moth, Ectomyelois ceratoniae (Lepidoptera: Pyralidae)
- Authors: Lloyd, Melissa
- Date: 2018
- Subjects: Pyralidae , Pyralidae -- Genetics , Pyralidae -- Phylogeny , Pyralidae -- Pathogens , Cladistic analysis , Transmission electron microscopy , Carob moth (Ectomyelois ceratoniae)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61894 , vital:28075
- Description: Carob moth, Ectomyelois ceratoniae (Zeller) (Lepidoptera: Pyralidae) is an economically important pest, yet its biology and pest status on citrus in South Africa was, until recently, poorly understood. A study was initiated to determine the cause of collapse of a laboratory carob moth colony that was established to investigate the biology of carob moth on citrus and to develop integrated management strategies for the pest. An organism was isolated from deceased larvae and was morphologically identified as a microsporidium, based on transmission electron microscopy. Microsporidia are obligate intracellular parasites that have been found to infect almost all eukaryotes. Several Nosema species have been isolated from economically important insect pests, yet little genetic information is available from online databases for identification. Mature spores were recovered and measured using transmission electron microscopy. Spores were ovocylindrical with a wrinkled exospore, and had a length of 2.8 ± 0.02 pm and a width of 1.6 ± 0.04 pm. The identity of the microsporidium was confirmed by PCR amplification, sequencing and analysis of the regions encoding the ribosomal RNA. BLAST analysis of the different rRNA regions amplified showed that the microsporidium shared a 96 - 99 % identity with Nosema sp. M-Pr, Nosema carpocapsae, Nosema oulemae, Nosema sp. CO1, Microsporidium 57864, and Nosema bombi. Phylogenetic analysis of the SSU and LSU rRNA genes showed that the microsporidium clustered with the Nosema / Vairimorpha clade, supported by a bootstrap value of 100. The organisation of the RNA cistron was determined by PCR amplification using the primer set 18f and L1328r to be 5’-SSU-ITS-LSU-IGS-5S-3’, which confirms the placement of the microsporidium within the Nosema / Vairimorpha clade. Because the BLAST results showed a close relationship with Nosema carpocapsae, a microsporidium infecting codling moth, the pathogenicity of the microsporidium was tested against codling moth by inoculating artificial diet with a high spore concentration of 1.1 x 107 spores/ml and a low spore concentration of 1.1 x 104 spores/ml. DNA was extracted from deceased larvae inoculated with the high concentration, and PCR of the SSU rRNA gene and bacterial 16S region was performed. Mortality in the high concentration experiment was significant (p = 0.05), but the cause of infection was determined to be a bacterium, through sequencing and BLAST analysis of the bacterial 16S rDNA. The bacterium shared a 99 % identity with Bacillus cereus. Percentage mortality (p = 0.09), larval mass (p = 0.09) and instar (p = 0.24) did not differ significantly between treatments in the low concentration experiment. DNA was extracted from the larvae and PCR amplification of the SSU rRNA gene was performed to determine whether microsporidia were present. No SSU bands were observed in any of the treatments and percentage mortality was not significant, thus it was determined that no infection occurred. This is the first study to report the genetic characterisation of a microsporidium isolated from carob moth and provides important genetic information for classification of microsporidia within the Nosema / Vairimorpha clade. It is also one of few studies in which the complete rRNA cistron of a species within the Nosema / Vairimorpha clade has been sequenced. The identification of a microsporidium from a laboratory colony of carob moth is important as it provides information about pathogens infecting the carob moth and constraints to carob moth rearing, which is useful for further studies on rearing carob moth and for establishment of a clean colony for research purposes.
- Full Text:
- Date Issued: 2018
- Authors: Lloyd, Melissa
- Date: 2018
- Subjects: Pyralidae , Pyralidae -- Genetics , Pyralidae -- Phylogeny , Pyralidae -- Pathogens , Cladistic analysis , Transmission electron microscopy , Carob moth (Ectomyelois ceratoniae)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/61894 , vital:28075
- Description: Carob moth, Ectomyelois ceratoniae (Zeller) (Lepidoptera: Pyralidae) is an economically important pest, yet its biology and pest status on citrus in South Africa was, until recently, poorly understood. A study was initiated to determine the cause of collapse of a laboratory carob moth colony that was established to investigate the biology of carob moth on citrus and to develop integrated management strategies for the pest. An organism was isolated from deceased larvae and was morphologically identified as a microsporidium, based on transmission electron microscopy. Microsporidia are obligate intracellular parasites that have been found to infect almost all eukaryotes. Several Nosema species have been isolated from economically important insect pests, yet little genetic information is available from online databases for identification. Mature spores were recovered and measured using transmission electron microscopy. Spores were ovocylindrical with a wrinkled exospore, and had a length of 2.8 ± 0.02 pm and a width of 1.6 ± 0.04 pm. The identity of the microsporidium was confirmed by PCR amplification, sequencing and analysis of the regions encoding the ribosomal RNA. BLAST analysis of the different rRNA regions amplified showed that the microsporidium shared a 96 - 99 % identity with Nosema sp. M-Pr, Nosema carpocapsae, Nosema oulemae, Nosema sp. CO1, Microsporidium 57864, and Nosema bombi. Phylogenetic analysis of the SSU and LSU rRNA genes showed that the microsporidium clustered with the Nosema / Vairimorpha clade, supported by a bootstrap value of 100. The organisation of the RNA cistron was determined by PCR amplification using the primer set 18f and L1328r to be 5’-SSU-ITS-LSU-IGS-5S-3’, which confirms the placement of the microsporidium within the Nosema / Vairimorpha clade. Because the BLAST results showed a close relationship with Nosema carpocapsae, a microsporidium infecting codling moth, the pathogenicity of the microsporidium was tested against codling moth by inoculating artificial diet with a high spore concentration of 1.1 x 107 spores/ml and a low spore concentration of 1.1 x 104 spores/ml. DNA was extracted from deceased larvae inoculated with the high concentration, and PCR of the SSU rRNA gene and bacterial 16S region was performed. Mortality in the high concentration experiment was significant (p = 0.05), but the cause of infection was determined to be a bacterium, through sequencing and BLAST analysis of the bacterial 16S rDNA. The bacterium shared a 99 % identity with Bacillus cereus. Percentage mortality (p = 0.09), larval mass (p = 0.09) and instar (p = 0.24) did not differ significantly between treatments in the low concentration experiment. DNA was extracted from the larvae and PCR amplification of the SSU rRNA gene was performed to determine whether microsporidia were present. No SSU bands were observed in any of the treatments and percentage mortality was not significant, thus it was determined that no infection occurred. This is the first study to report the genetic characterisation of a microsporidium isolated from carob moth and provides important genetic information for classification of microsporidia within the Nosema / Vairimorpha clade. It is also one of few studies in which the complete rRNA cistron of a species within the Nosema / Vairimorpha clade has been sequenced. The identification of a microsporidium from a laboratory colony of carob moth is important as it provides information about pathogens infecting the carob moth and constraints to carob moth rearing, which is useful for further studies on rearing carob moth and for establishment of a clean colony for research purposes.
- Full Text:
- Date Issued: 2018
Macroinvertebrate and diatom assemblage responses to pollution, with emphasis on salinity, in the Kat River, Eastern Cape South Africa
- Authors: Mgaba, Ntombekhaya
- Date: 2018
- Subjects: Water -- Pollution -- South Africa -- Kat River , Stream salinity -- South Africa -- Kat River , Sewage disposal plants -- South Africa , Environmental monitoring -- South Africa -- Kat River , Water quality -- South Africa -- Kat River , South African Scoring System version 5 (SASS5) , Macroinvertebrate Response Assessment Index (MIRAI)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63279 , vital:28389
- Description: Salinity has been implicated as one of the major contributors to deteriorating water quality of freshwater ecosystems around the globe. In South Africa, anthropogenic activities such as mining, agriculture, industry and wastewater treatment works (WWTWs) are the major sources of increasing salinity levels of freshwater resources. The main focus of this study was to assess the impact of salinity on water quality of the Kat River using macroinvertebrates and diatoms as bioindicators. Biomonitoring using macroinvertebrates and diatom communities and concurrent sampling of water physicochemical variables were conducted bi-monthly from December 2015 to November 2016.This period covered summer and winter, and the study was conducted at five selected sites (Sites 1, 2, 3, 4 and 5) along the length of the Kat River. For macroinvertebrates biomonitoring, the South African Scoring System version 5 (SASS5) and Macroinvertebrate Response Assessment Index (MIRAI) were applied to collect and analyse data, while the Taylor et al (2006) protocol for collecting and analysing diatom assemblages was modified and used for diatom collection and analysis. Water physicochemical variables, including hydrogen ion concentration (pH), electrical conductivity (EC), dissolved oxygen (DO), temperature, turbidity and stream flow were determined in situ using appropriate multiprobe meter and/or techniques. Nutrients (NO3-N, NO2-N, NH4-N and PO4-P) were analysed in the laboratory using appropriate analytical methods. All data were subjected to appropriate statistical analyses and statistical decisions were made at an alpha value of 0.05. Particularly, multivariate analyses of both macroinvertebrates and diatoms assemblages were conducted using canonical correspondence analysis and Bray-Curtis similarity analysis, while indicator species analysis was used to determine which species is/are more significant with respect to biomonitoring in the Kat River. Biotic diversity indices were also measured and used to discriminate between least and most impacted sites. The Kat River water quality was found to have experienced a varying degree of modification compared to Generic Resources Water Quality Objectives limits. Change in DO, stream flow, EC, nutrients and turbidity exerted the greatest influenced on the macroinvertebrates assemblage structure, with organisms at Sites 4 and 5 (downstream sites) showing more significant negative impact compared to organisms at Sites 1, 2 and 3 (upstream sites). Analysis of the diatom biomonitoring showed more negative impact at Sites 2, 4 and 5 compared to Sites 1 and 3. Fort Beaufort Wastewater Treatment Works and small-scale farming activities, as well as leaking of pipes carrying sewage, were found to be the likely major sources of anthropogenic activities responsible for the observed increased salinity and other pollutants in the Kat River. Overall, this study found macroinvertebrates (identified up to the family level) as good for biomonitoring to assess or predict water quality of the Kat River, while diatoms were found to be most suitable for biomonitoring to assess salinity in the Kat River.
- Full Text:
- Date Issued: 2018
- Authors: Mgaba, Ntombekhaya
- Date: 2018
- Subjects: Water -- Pollution -- South Africa -- Kat River , Stream salinity -- South Africa -- Kat River , Sewage disposal plants -- South Africa , Environmental monitoring -- South Africa -- Kat River , Water quality -- South Africa -- Kat River , South African Scoring System version 5 (SASS5) , Macroinvertebrate Response Assessment Index (MIRAI)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63279 , vital:28389
- Description: Salinity has been implicated as one of the major contributors to deteriorating water quality of freshwater ecosystems around the globe. In South Africa, anthropogenic activities such as mining, agriculture, industry and wastewater treatment works (WWTWs) are the major sources of increasing salinity levels of freshwater resources. The main focus of this study was to assess the impact of salinity on water quality of the Kat River using macroinvertebrates and diatoms as bioindicators. Biomonitoring using macroinvertebrates and diatom communities and concurrent sampling of water physicochemical variables were conducted bi-monthly from December 2015 to November 2016.This period covered summer and winter, and the study was conducted at five selected sites (Sites 1, 2, 3, 4 and 5) along the length of the Kat River. For macroinvertebrates biomonitoring, the South African Scoring System version 5 (SASS5) and Macroinvertebrate Response Assessment Index (MIRAI) were applied to collect and analyse data, while the Taylor et al (2006) protocol for collecting and analysing diatom assemblages was modified and used for diatom collection and analysis. Water physicochemical variables, including hydrogen ion concentration (pH), electrical conductivity (EC), dissolved oxygen (DO), temperature, turbidity and stream flow were determined in situ using appropriate multiprobe meter and/or techniques. Nutrients (NO3-N, NO2-N, NH4-N and PO4-P) were analysed in the laboratory using appropriate analytical methods. All data were subjected to appropriate statistical analyses and statistical decisions were made at an alpha value of 0.05. Particularly, multivariate analyses of both macroinvertebrates and diatoms assemblages were conducted using canonical correspondence analysis and Bray-Curtis similarity analysis, while indicator species analysis was used to determine which species is/are more significant with respect to biomonitoring in the Kat River. Biotic diversity indices were also measured and used to discriminate between least and most impacted sites. The Kat River water quality was found to have experienced a varying degree of modification compared to Generic Resources Water Quality Objectives limits. Change in DO, stream flow, EC, nutrients and turbidity exerted the greatest influenced on the macroinvertebrates assemblage structure, with organisms at Sites 4 and 5 (downstream sites) showing more significant negative impact compared to organisms at Sites 1, 2 and 3 (upstream sites). Analysis of the diatom biomonitoring showed more negative impact at Sites 2, 4 and 5 compared to Sites 1 and 3. Fort Beaufort Wastewater Treatment Works and small-scale farming activities, as well as leaking of pipes carrying sewage, were found to be the likely major sources of anthropogenic activities responsible for the observed increased salinity and other pollutants in the Kat River. Overall, this study found macroinvertebrates (identified up to the family level) as good for biomonitoring to assess or predict water quality of the Kat River, while diatoms were found to be most suitable for biomonitoring to assess salinity in the Kat River.
- Full Text:
- Date Issued: 2018
Mining, agriculture and wetland ecological infrastructure in the Upper Komati catchment (South Africa): contestations in a complex social-ecological system
- Authors: Keighley, Tia-Kristi
- Date: 2018
- Subjects: Wetland ecology -- Komati River Watershed , Coal mines and mining -- Environmental aspects -- Komati River Watershed , Agriculture -- Environmental aspects -- Komati River Watershed , Acid mine drainage -- Komati River Watershed , Water quality -- Physiological effect -- Komati River Watershed , Wetland conservation -- Komati River Watershed , National Freshwater Ecosystem Priority Areas (NFEPAs)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63810 , vital:28491
- Description: Wetlands provide a wide variety of natural benefits (ecosystem services) from the natural environment to human populations, making them key examples of ecological infrastructure. However, the use of wetlands and their associated catchments is often contested by different users, making them nodes of conflict. Thus, there is a range of pressures on many wetlands which can ultimately lead to degradation or destruction. This study investigated the X11B quaternary catchment in the Upper Inkomati basin, Mpumalanga, South Africa. This catchment is characterised by a network of wetlands and streams that provide catchment residents with water. The sub-catchment is heavily used, dominated by the agricultural sector and coal mining. To understand the contestation, a contextual analysis was carried out. Selected wetland conditions and ecosystem services, along with user perceptions and the value of wetland-use, were assessed. Wetlands were observably in a relatively healthy condition. The resilience of wetlands and the efficiency of the ecosystem services they offer, especially in mediating water quality, were clear. The early results indicated a healthy landscape despite multiple-user impact from human activity. The health scores and provision of ecosystem services, along with the identified National Freshwater Ecosystem Priority Areas (NFEPAs) and red-listed fauna and flora, provide a substantial grounding for advocating the conservation of the wetlands of the contested X11B catchment. When water quality measures were added to the wetland health and ecosystem service assessment, low pH levels and high electrical conductivity were recorded. Both measures indicate coal mining impacts, more specifically Acid Mine Drainage (AMD) impacts, since AMD typically has sulphate as the dominant salt ion, and high concentrations of trace elements and metal ions. Concentrations breaching the recommended resource quality objectives (RQOs) of trace elements and ions, found in fertilizers and pesticides, were recorded in most sites, suggesting agricultural impacts on the landscape’s hydrology. Further, these agricultural impacts would add to the compromising effect of the wetlands’ capacity to remove pollutants from the water body. Livestock farming on all sites were also near wetlands which may have limited the vegetation cover of grazed land, so increasing runoff and the volume of water entering wetlands and compromising their ecosystem services. Poor water quality has implications for biophysical processes, which play an important role in the functioning of wetlands, for the benefit of users. Without the water quality measures, ecosystem health and ecosystem service methodology used suggested a healthy catchment. However, simple field water quality measures indicated past and present mining impacts. Therefore, the mandatory use of water chemistry is recommended in the assessment of wetlands in catchments with past and present mining activity taking place. Without this, repercussions would include wetland loss, and a more thorough investigation into the water quality and its effects on the wetland ecosystems is suggested. Further ecological investigation of water chemistry (heavy metals, ions, nutrients and trace elements) and macroinvertebrate assemblages identified links to water chemistry impacts on macroinvertebrate abundance and diversity. Abundance results based on the presence, absence and abundance of macroinvertebrates at the different sites did not reveal any clear patterns associated with different landscape users. Diversity, on the other hand, was related to land-use, where sites with high mining use had lower macroinvertebrate diversity than other sites. Related, concurrent, hydro-pedology research produced a more comprehensive understanding of the impact of mining on hydro-connectivity that clearly indicates mining as the cause of long-term deterioration of functional wetland health in a way that is practically impossible to restore. This study suggests that wetlands provide a strong ecosystem service of intermittent resetting of the wetland sediment adsorptive capacity for toxic metal and other salt ions. The hypothesis arising from the work is that, in the case of another heavy rainfall event, the town of Carolina risks another AMD crisis. As sediments are likely to be accumulating and saturated with toxic metal ions. Further AMD-related changes in acidity will increase the mobilisation of adsorbed ions. Future flooding and flushing of wetlands will therefore once again move toxic metal ions through the system, and possibly re-contaminate the Boesmanspruit dam. The value of the study is in delivering specific evidence on the impacts of mining (and to a lesser extent agriculture) on wetland quality. Overall, this study, combined with additional research, indicates that in the X11B catchment, mining impacts are long-term and more serious than agriculture. In terms of contestation the research indicates that reliance on bio-physical data and knowledge is inadequate in resolving conflict between coal mining and other land- and water-users. The study demonstrates the necessity of insight into the social system and the value of a transdisciplinary approach in addressing land-use conflicts and wetland protection.
- Full Text:
- Date Issued: 2018
- Authors: Keighley, Tia-Kristi
- Date: 2018
- Subjects: Wetland ecology -- Komati River Watershed , Coal mines and mining -- Environmental aspects -- Komati River Watershed , Agriculture -- Environmental aspects -- Komati River Watershed , Acid mine drainage -- Komati River Watershed , Water quality -- Physiological effect -- Komati River Watershed , Wetland conservation -- Komati River Watershed , National Freshwater Ecosystem Priority Areas (NFEPAs)
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63810 , vital:28491
- Description: Wetlands provide a wide variety of natural benefits (ecosystem services) from the natural environment to human populations, making them key examples of ecological infrastructure. However, the use of wetlands and their associated catchments is often contested by different users, making them nodes of conflict. Thus, there is a range of pressures on many wetlands which can ultimately lead to degradation or destruction. This study investigated the X11B quaternary catchment in the Upper Inkomati basin, Mpumalanga, South Africa. This catchment is characterised by a network of wetlands and streams that provide catchment residents with water. The sub-catchment is heavily used, dominated by the agricultural sector and coal mining. To understand the contestation, a contextual analysis was carried out. Selected wetland conditions and ecosystem services, along with user perceptions and the value of wetland-use, were assessed. Wetlands were observably in a relatively healthy condition. The resilience of wetlands and the efficiency of the ecosystem services they offer, especially in mediating water quality, were clear. The early results indicated a healthy landscape despite multiple-user impact from human activity. The health scores and provision of ecosystem services, along with the identified National Freshwater Ecosystem Priority Areas (NFEPAs) and red-listed fauna and flora, provide a substantial grounding for advocating the conservation of the wetlands of the contested X11B catchment. When water quality measures were added to the wetland health and ecosystem service assessment, low pH levels and high electrical conductivity were recorded. Both measures indicate coal mining impacts, more specifically Acid Mine Drainage (AMD) impacts, since AMD typically has sulphate as the dominant salt ion, and high concentrations of trace elements and metal ions. Concentrations breaching the recommended resource quality objectives (RQOs) of trace elements and ions, found in fertilizers and pesticides, were recorded in most sites, suggesting agricultural impacts on the landscape’s hydrology. Further, these agricultural impacts would add to the compromising effect of the wetlands’ capacity to remove pollutants from the water body. Livestock farming on all sites were also near wetlands which may have limited the vegetation cover of grazed land, so increasing runoff and the volume of water entering wetlands and compromising their ecosystem services. Poor water quality has implications for biophysical processes, which play an important role in the functioning of wetlands, for the benefit of users. Without the water quality measures, ecosystem health and ecosystem service methodology used suggested a healthy catchment. However, simple field water quality measures indicated past and present mining impacts. Therefore, the mandatory use of water chemistry is recommended in the assessment of wetlands in catchments with past and present mining activity taking place. Without this, repercussions would include wetland loss, and a more thorough investigation into the water quality and its effects on the wetland ecosystems is suggested. Further ecological investigation of water chemistry (heavy metals, ions, nutrients and trace elements) and macroinvertebrate assemblages identified links to water chemistry impacts on macroinvertebrate abundance and diversity. Abundance results based on the presence, absence and abundance of macroinvertebrates at the different sites did not reveal any clear patterns associated with different landscape users. Diversity, on the other hand, was related to land-use, where sites with high mining use had lower macroinvertebrate diversity than other sites. Related, concurrent, hydro-pedology research produced a more comprehensive understanding of the impact of mining on hydro-connectivity that clearly indicates mining as the cause of long-term deterioration of functional wetland health in a way that is practically impossible to restore. This study suggests that wetlands provide a strong ecosystem service of intermittent resetting of the wetland sediment adsorptive capacity for toxic metal and other salt ions. The hypothesis arising from the work is that, in the case of another heavy rainfall event, the town of Carolina risks another AMD crisis. As sediments are likely to be accumulating and saturated with toxic metal ions. Further AMD-related changes in acidity will increase the mobilisation of adsorbed ions. Future flooding and flushing of wetlands will therefore once again move toxic metal ions through the system, and possibly re-contaminate the Boesmanspruit dam. The value of the study is in delivering specific evidence on the impacts of mining (and to a lesser extent agriculture) on wetland quality. Overall, this study, combined with additional research, indicates that in the X11B catchment, mining impacts are long-term and more serious than agriculture. In terms of contestation the research indicates that reliance on bio-physical data and knowledge is inadequate in resolving conflict between coal mining and other land- and water-users. The study demonstrates the necessity of insight into the social system and the value of a transdisciplinary approach in addressing land-use conflicts and wetland protection.
- Full Text:
- Date Issued: 2018