Climatic suitability and compatibility of the invasive Iris pseudacorus L.(Iridaceae) in the Southern Hemisphere: Considerations for biocontrol
- Minuti, Gianmarco, Stiers, Iris, Coetzee, Julie A
- Authors: Minuti, Gianmarco , Stiers, Iris , Coetzee, Julie A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/423293 , vital:72045 , xlink:href="https://doi.org/10.1016/j.biocontrol.2022.104886"
- Description: Iris pseudacorus L. (Iridaceae) is an emergent macrophyte native to Europe, North Africa and western Asia. Considered invasive in wetland habitats around the world, this species is now the target of a biocontrol programme in the Southern Hemisphere. Native range surveys of the weed led to the selection of the flea beetle, Aphthona nonstriata Goeze (Coleoptera: Chrysomelidae), as a candidate biocontrol agent. An important aspect to consider in weed biocontrol is the ability of an agent to establish and thrive in the environment where it is released. Climatic incompatibility between source and intended release sites can in fact limit the success of a biocontrol programme. In the current study, the potential climatic niche of I. pseudacorus and A. nonstriata in the Southern Hemisphere was analysed. The ecological niche modelling software MaxEnt was used to map the climatic suitability of both organisms across invaded regions in South America, southern Africa and Australasia. Furthermore, occurrence records from each invaded range were used independently to model the climatic compatibility of I. pseudacorus in Europe, in order to prioritize areas of the native range to explore during future surveys for potential biocontrol agents. The models identified areas at high risk of invasion by I. pseudacorus in northern Argentina, Uruguay, southern Brazil and central Chile, as well as numerous provinces of eastern South Africa, Lesotho, southern Australia and New Zealand. Accordingly, the highest climatic suitability for A. nonstriata was predicted across the humid temperate climates of north-east Argentina, Uruguay, southern Brazil, southern South Africa, south-east Australia and New Zealand. These results can eventually be used in future release plans to prioritize areas where establishment and survival of the agent is expected to be highest. At the same time, it may be useful to search the native range of the weed for biological control agents showing high climatic adaptation towards the intended release sites of each invaded range. In this regards, our climatic compatibility models identified high-priority areas across the Mediterranean regions of Italy and southern France, as well as the temperate regions of central and western Europe. Altogether, the current study provides useful new information to tackle the invasion and advance the biocontrol programme of I. pseudacorus in the Southern Hemisphere.
- Full Text:
- Authors: Minuti, Gianmarco , Stiers, Iris , Coetzee, Julie A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/423293 , vital:72045 , xlink:href="https://doi.org/10.1016/j.biocontrol.2022.104886"
- Description: Iris pseudacorus L. (Iridaceae) is an emergent macrophyte native to Europe, North Africa and western Asia. Considered invasive in wetland habitats around the world, this species is now the target of a biocontrol programme in the Southern Hemisphere. Native range surveys of the weed led to the selection of the flea beetle, Aphthona nonstriata Goeze (Coleoptera: Chrysomelidae), as a candidate biocontrol agent. An important aspect to consider in weed biocontrol is the ability of an agent to establish and thrive in the environment where it is released. Climatic incompatibility between source and intended release sites can in fact limit the success of a biocontrol programme. In the current study, the potential climatic niche of I. pseudacorus and A. nonstriata in the Southern Hemisphere was analysed. The ecological niche modelling software MaxEnt was used to map the climatic suitability of both organisms across invaded regions in South America, southern Africa and Australasia. Furthermore, occurrence records from each invaded range were used independently to model the climatic compatibility of I. pseudacorus in Europe, in order to prioritize areas of the native range to explore during future surveys for potential biocontrol agents. The models identified areas at high risk of invasion by I. pseudacorus in northern Argentina, Uruguay, southern Brazil and central Chile, as well as numerous provinces of eastern South Africa, Lesotho, southern Australia and New Zealand. Accordingly, the highest climatic suitability for A. nonstriata was predicted across the humid temperate climates of north-east Argentina, Uruguay, southern Brazil, southern South Africa, south-east Australia and New Zealand. These results can eventually be used in future release plans to prioritize areas where establishment and survival of the agent is expected to be highest. At the same time, it may be useful to search the native range of the weed for biological control agents showing high climatic adaptation towards the intended release sites of each invaded range. In this regards, our climatic compatibility models identified high-priority areas across the Mediterranean regions of Italy and southern France, as well as the temperate regions of central and western Europe. Altogether, the current study provides useful new information to tackle the invasion and advance the biocontrol programme of I. pseudacorus in the Southern Hemisphere.
- Full Text:
Comparative avifaunal richness and diversity in invasive Acacia dealbata patches and adjacent montane grasslands
- Seath, Jessica, Shackleton, Charlie M
- Authors: Seath, Jessica , Shackleton, Charlie M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/406585 , vital:70287 , xlink:href="https://hdl.handle.net/10520/ejc-afzoo_v57_i1_a12"
- Description: Abstract Invasive alien species are regarded as the second greatest threat to biodiversity globally. Yet, at a local scale their effects may vary, underlying the requirement for more local-scale studies across taxa and settings. Here we consider the effects of an alien invasive tree (Acacia dealbata, 5–8 m tall) on avifaunal numbers, richness and diversity in A. dealbata patches of three sizes relative to adjacent montane grasslands. Analysis of historical aerial photographs showed that A. dealbata first occurred in the area in the late 1930s/early 1940s and has continued to spread, despite some efforts by the landowner to keep it in check. It now covers approximately 11% of the site. This has provided habitat for a number of bird species more characteristic of wooded vegetation types. The number, richness and diversity of birds were greater in A. dealbata patches than the adjacent grasslands of equivalent size. These measures increased with increasing patch size, but more rapidly for A. dealbata patches than grassland ones. Only six of the 48 species of birds recorded were common between the two vegetation types. The most common feeding guild in the A. dealbata patches was insectivores, whereas in the grasslands it was omnivores. Although the invasion of A. dealbata has added to the habitat diversity of the area, thereby facilitating increased avifaunal diversity, if it continues to spread, then the populations and perhaps richness of grassland birds are likely to be negatively affected.
- Full Text:
- Authors: Seath, Jessica , Shackleton, Charlie M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/406585 , vital:70287 , xlink:href="https://hdl.handle.net/10520/ejc-afzoo_v57_i1_a12"
- Description: Abstract Invasive alien species are regarded as the second greatest threat to biodiversity globally. Yet, at a local scale their effects may vary, underlying the requirement for more local-scale studies across taxa and settings. Here we consider the effects of an alien invasive tree (Acacia dealbata, 5–8 m tall) on avifaunal numbers, richness and diversity in A. dealbata patches of three sizes relative to adjacent montane grasslands. Analysis of historical aerial photographs showed that A. dealbata first occurred in the area in the late 1930s/early 1940s and has continued to spread, despite some efforts by the landowner to keep it in check. It now covers approximately 11% of the site. This has provided habitat for a number of bird species more characteristic of wooded vegetation types. The number, richness and diversity of birds were greater in A. dealbata patches than the adjacent grasslands of equivalent size. These measures increased with increasing patch size, but more rapidly for A. dealbata patches than grassland ones. Only six of the 48 species of birds recorded were common between the two vegetation types. The most common feeding guild in the A. dealbata patches was insectivores, whereas in the grasslands it was omnivores. Although the invasion of A. dealbata has added to the habitat diversity of the area, thereby facilitating increased avifaunal diversity, if it continues to spread, then the populations and perhaps richness of grassland birds are likely to be negatively affected.
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Comparison of Task Scheduling Algorithms for Traffic Surveillance Application Using Fog Computing
- Sinqadu, Mluleki, Shibeshi, Zelalem S, Khalid, Khuram
- Authors: Sinqadu, Mluleki , Shibeshi, Zelalem S , Khalid, Khuram
- Date: 2022
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/429150 , vital:72563 , https://doi.org/10.1007/978-3-030-89776-5_3
- Description: One of the issues that service consumers face when using cloud-based solutions is the delay in processing large and real-time data. Fog computing has been introduced as a solution to this issue since it allows the data to be processed at the edge of a network while enabling different tasks to be scheduled for processing in fog devices at the edge network. These devices still require cloud resources to give them the capacity of processing real-time applications. However, scheduling these tasks must be made in such a way that they do not consume all the available resources on a fog device. When a task consumes all available resources, it can lead to network breakdown or high latency which is not acceptable for real-time applications. Therefore, to address this problem, this chapter proposes a task scheduling technique for traffic surveillance vehicular network application through smart cameras. We used the iFogSim simulator, where the scenario of vehicle tracking is considered. Simulations are conducted to find an efficient scheduling algorithm among a pool of available ones that can optimize the energy consumption and average delay of our proposed real-time application model. The results show that the First Come First Serve (FCFS) scheduling algorithm outperforms the Short Job First (SJF), Generalized Priority (GP) and Round Robin (RR) counterparts in terms of average latency, energy usage, execution time and network usage.
- Full Text:
- Authors: Sinqadu, Mluleki , Shibeshi, Zelalem S , Khalid, Khuram
- Date: 2022
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/429150 , vital:72563 , https://doi.org/10.1007/978-3-030-89776-5_3
- Description: One of the issues that service consumers face when using cloud-based solutions is the delay in processing large and real-time data. Fog computing has been introduced as a solution to this issue since it allows the data to be processed at the edge of a network while enabling different tasks to be scheduled for processing in fog devices at the edge network. These devices still require cloud resources to give them the capacity of processing real-time applications. However, scheduling these tasks must be made in such a way that they do not consume all the available resources on a fog device. When a task consumes all available resources, it can lead to network breakdown or high latency which is not acceptable for real-time applications. Therefore, to address this problem, this chapter proposes a task scheduling technique for traffic surveillance vehicular network application through smart cameras. We used the iFogSim simulator, where the scenario of vehicle tracking is considered. Simulations are conducted to find an efficient scheduling algorithm among a pool of available ones that can optimize the energy consumption and average delay of our proposed real-time application model. The results show that the First Come First Serve (FCFS) scheduling algorithm outperforms the Short Job First (SJF), Generalized Priority (GP) and Round Robin (RR) counterparts in terms of average latency, energy usage, execution time and network usage.
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Conceptualising public-private partnerships for social innovation through community engagement in higher education institutions
- Sibhensana, Bertha, Maistry, Savathrie M
- Authors: Sibhensana, Bertha , Maistry, Savathrie M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426269 , vital:72337 , xlink:href="https://hdl.handle.net/10520/ejc-high_v37_n1_a11"
- Description: The achievement of human social and economic development has been equated to social innovation. Innovation that focuses on the marginalised communities in South Africa becomes necessary to redress the inequalities created pre-democracy. As social institutions, higher education institutions are well positioned to deal with the challenges of the 21st century, which include poverty, unemployment and inequality, through promoting social innovation. In democratic South Africa the relationship between an institution of higher learning and the community can be viewed as a social innovation. This submission implies that one of the objectives of community engagement as a core function of universities, is to drive the social innovation agenda. The university’s contributions to community development can be viewed in terms of its ability to commit to social innovation. It is a better vehicle for understanding and creating social value in all its forms.
- Full Text:
- Authors: Sibhensana, Bertha , Maistry, Savathrie M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426269 , vital:72337 , xlink:href="https://hdl.handle.net/10520/ejc-high_v37_n1_a11"
- Description: The achievement of human social and economic development has been equated to social innovation. Innovation that focuses on the marginalised communities in South Africa becomes necessary to redress the inequalities created pre-democracy. As social institutions, higher education institutions are well positioned to deal with the challenges of the 21st century, which include poverty, unemployment and inequality, through promoting social innovation. In democratic South Africa the relationship between an institution of higher learning and the community can be viewed as a social innovation. This submission implies that one of the objectives of community engagement as a core function of universities, is to drive the social innovation agenda. The university’s contributions to community development can be viewed in terms of its ability to commit to social innovation. It is a better vehicle for understanding and creating social value in all its forms.
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Constellations, technicality, iconisation and Eskom: A case from South Africa’s Business Day
- Siebörger, Ian, Adendorff, Ralph D
- Authors: Siebörger, Ian , Adendorff, Ralph D
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/385350 , vital:68010 , xlink:href="https://doi.org/10.2989/16073614.2022.2040369"
- Description: This article uses Legitimation Code Theory (LCT) and systemic functional linguistics (SFL) to explore interactions between various resources for building economic and political knowledge in a 2015 article from Business Day, a South African newspaper, concerning the country’s energy crisis. We use LCT to observe how three constellations are built in the article: a ‘developmental state’ constellation; a ‘neo-liberal’ constellation; and another underarticulated constellation that selectively draws ideas from both the preceding constellations. These constellations are built through the unfolding of the text using various linguistic resources, which we describe using SFL, including technicality and iconisation. We identify instances where words are charged with both ideational and axiological meaning concurrently, challenging existing understandings of the process of iconisation.
- Full Text:
- Authors: Siebörger, Ian , Adendorff, Ralph D
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/385350 , vital:68010 , xlink:href="https://doi.org/10.2989/16073614.2022.2040369"
- Description: This article uses Legitimation Code Theory (LCT) and systemic functional linguistics (SFL) to explore interactions between various resources for building economic and political knowledge in a 2015 article from Business Day, a South African newspaper, concerning the country’s energy crisis. We use LCT to observe how three constellations are built in the article: a ‘developmental state’ constellation; a ‘neo-liberal’ constellation; and another underarticulated constellation that selectively draws ideas from both the preceding constellations. These constellations are built through the unfolding of the text using various linguistic resources, which we describe using SFL, including technicality and iconisation. We identify instances where words are charged with both ideational and axiological meaning concurrently, challenging existing understandings of the process of iconisation.
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Decoration of glass wool with zinc (II) phthalocyanine for the photocatalytic transformation of methyl orange
- Sindelo, Azole, Britton, Jonathan, Lanterna, Anabel E, Scaiano, Juan C, Nyokong, Tebello
- Authors: Sindelo, Azole , Britton, Jonathan , Lanterna, Anabel E , Scaiano, Juan C , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295742 , vital:57374 , xlink:href="https://doi.org/10.1016/j.jphotochem.2022.114127"
- Description: Zinc phthalocyanines containing one (mono carboxy phenoxy, ZnMCPPc), four (tetra carboxy phenoxy, ZnTCPPc), and eight (tetra isophthalic acid, ZnTIPAPc) carboxyl groups were covalently conjugated to amine-functionalized glass wool (GW). The GW-Pcs were characterized and evaluated for singlet oxygen generation. The photocatalytic efficiencies of the GW-Pcs were assessed using methyl orange. Glass wool alone and the modified conjugates exhibited low to no degradation of methyl orange in the dark. The improved catalytic rate was observed for GW-ZnMCPPc and GW-ZnTCPPc compared to GW-ZnTIPAPc due to the latter's lower singlet oxygen quantum yield generation. In addition, the modified glass wool was recyclable, making it suitable candidates for future environmental applications.
- Full Text:
- Authors: Sindelo, Azole , Britton, Jonathan , Lanterna, Anabel E , Scaiano, Juan C , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295742 , vital:57374 , xlink:href="https://doi.org/10.1016/j.jphotochem.2022.114127"
- Description: Zinc phthalocyanines containing one (mono carboxy phenoxy, ZnMCPPc), four (tetra carboxy phenoxy, ZnTCPPc), and eight (tetra isophthalic acid, ZnTIPAPc) carboxyl groups were covalently conjugated to amine-functionalized glass wool (GW). The GW-Pcs were characterized and evaluated for singlet oxygen generation. The photocatalytic efficiencies of the GW-Pcs were assessed using methyl orange. Glass wool alone and the modified conjugates exhibited low to no degradation of methyl orange in the dark. The improved catalytic rate was observed for GW-ZnMCPPc and GW-ZnTCPPc compared to GW-ZnTIPAPc due to the latter's lower singlet oxygen quantum yield generation. In addition, the modified glass wool was recyclable, making it suitable candidates for future environmental applications.
- Full Text:
Deep Palmprint Recognition with Alignment and Augmentation of Limited Training Samples
- Brown, Dane, Bradshaw, Karen L
- Authors: Brown, Dane , Bradshaw, Karen L
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440249 , vital:73760 , xlink:href="https://doi.org/10.1007/s42979-021-00859-3"
- Description: This paper builds upon a previously proposed automatic palmprint alignment and classification system. The proposed system was geared towards palmprints acquired from either contact or contactless sensors. It was robust to finger location and fist shape changes—accurately extracting the palmprints in images without fingers. An extension to this previous work includes comparisons of traditional and deep learning models, both with hyperparameter tuning. The proposed methods are compared with related verification systems and a detailed evaluation of open-set identification. The best results were yielded by a proposed Convolutional Neural Network, based on VGG-16, and outperforming tuned VGG-16 and Xception architectures. All deep learning algorithms are provided with augmented data, included in the tuning process, enabling significant accuracy gains. Highlights include near-zero and zero EER on IITD-Palmprint verification using one training sample and leave-one-out strategy, respectively. Therefore, the proposed palmprint system is practical as it is effective on data containing many and few training examples.
- Full Text:
- Authors: Brown, Dane , Bradshaw, Karen L
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440249 , vital:73760 , xlink:href="https://doi.org/10.1007/s42979-021-00859-3"
- Description: This paper builds upon a previously proposed automatic palmprint alignment and classification system. The proposed system was geared towards palmprints acquired from either contact or contactless sensors. It was robust to finger location and fist shape changes—accurately extracting the palmprints in images without fingers. An extension to this previous work includes comparisons of traditional and deep learning models, both with hyperparameter tuning. The proposed methods are compared with related verification systems and a detailed evaluation of open-set identification. The best results were yielded by a proposed Convolutional Neural Network, based on VGG-16, and outperforming tuned VGG-16 and Xception architectures. All deep learning algorithms are provided with augmented data, included in the tuning process, enabling significant accuracy gains. Highlights include near-zero and zero EER on IITD-Palmprint verification using one training sample and leave-one-out strategy, respectively. Therefore, the proposed palmprint system is practical as it is effective on data containing many and few training examples.
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Design and fabrication of electrochemical sensor based on molecularly imprinted polymer loaded onto silver nanoparticles for the detection of 17-β-Estradiol
- Regasa, Melkamu Biyana, Nyokong, Tebello
- Authors: Regasa, Melkamu Biyana , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/300287 , vital:57913 , xlink:href="https://doi.org/10.1002/jmr.2978"
- Description: In this research report, we prepared an electrochemical sensor based on the molecularly imprinted poly(p-aminophenol) supported by silver nanoparticles capped with 2-mercaptobenzoxazole for the selective and sensitive detection of endocrine disrupting 17-β-estradiol (E2). The electropolymerization of the functional monomer prepared the proposed molecularly imprinted polymer (MIP) composite-based sensor in the presence of E2 as a template. The recognition materials were characterized using Fourier transform infrared, cyclic voltammetry (CV), square wave voltammetry (SWV), scanning electron microscopy, energy-dispersive X-ray spectroscopy and X-ray powder diffraction techniques. The electrochemical measurements were performed by employing both CV and SWV methods. We did the optimization of critical parameters affecting the sensor performances through the experimental design and verification. The developed sensor showed a linear range from 10 pM to 100 nM with the calculated quantification and detection limits of 1.86 and 6.19 pM, respectively. The incorporation of AgNP with high electrical conductivity into the MIP matrix enhanced the sensor's performance. Furthermore, the sensor was applied to determine E2 in real water samples without any sample preconcentration steps to achieve the percent recovery of 91.87% to 98.36% and acceptable reusability and storage stability performances.
- Full Text:
- Authors: Regasa, Melkamu Biyana , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/300287 , vital:57913 , xlink:href="https://doi.org/10.1002/jmr.2978"
- Description: In this research report, we prepared an electrochemical sensor based on the molecularly imprinted poly(p-aminophenol) supported by silver nanoparticles capped with 2-mercaptobenzoxazole for the selective and sensitive detection of endocrine disrupting 17-β-estradiol (E2). The electropolymerization of the functional monomer prepared the proposed molecularly imprinted polymer (MIP) composite-based sensor in the presence of E2 as a template. The recognition materials were characterized using Fourier transform infrared, cyclic voltammetry (CV), square wave voltammetry (SWV), scanning electron microscopy, energy-dispersive X-ray spectroscopy and X-ray powder diffraction techniques. The electrochemical measurements were performed by employing both CV and SWV methods. We did the optimization of critical parameters affecting the sensor performances through the experimental design and verification. The developed sensor showed a linear range from 10 pM to 100 nM with the calculated quantification and detection limits of 1.86 and 6.19 pM, respectively. The incorporation of AgNP with high electrical conductivity into the MIP matrix enhanced the sensor's performance. Furthermore, the sensor was applied to determine E2 in real water samples without any sample preconcentration steps to achieve the percent recovery of 91.87% to 98.36% and acceptable reusability and storage stability performances.
- Full Text:
Detecting and removing sample contamination in phylogenomic data: an example and its implications for Cicadidae phylogeny (Insecta Hemiptera).
- Owen, Christopher L, Marshall, David C, Wade, Elizabeth J, Meister, Russ, Goemans, Geert, Kunte, Krushnamegh, Moulds, Max, Hill, Kathy, Villet, Martin H, Pham, Thai-Hong, Kortyna, Michelle, Lemmon, Emily M, Lemmon, Alan R, Simon, Chris
- Authors: Owen, Christopher L , Marshall, David C , Wade, Elizabeth J , Meister, Russ , Goemans, Geert , Kunte, Krushnamegh , Moulds, Max , Hill, Kathy , Villet, Martin H , Pham, Thai-Hong , Kortyna, Michelle , Lemmon, Emily M , Lemmon, Alan R , Simon, Chris
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440749 , vital:73809 , https://doi.org/10.1093/sysbio/syac043
- Description: Contamination of a genetic sample with DNA from one or more nontarget species is a continuing concern of molecular phylogenetic studies, both Sanger sequencing studies and next-generation sequencing studies. We developed an automated pipeline for identifying and excluding likely cross-contaminated loci based on the detection of bimodal distributions of patristic distances across gene trees. When contamination occurs between samples within a data set, a comparison between a contaminated sample and its contaminant taxon will yield bimodal distributions with one peak close to zero patristic distance. This new method does not rely on a priori knowledge of taxon relatedness nor does it determine the causes(s) of the contamination. Exclusion of putatively contaminated loci from a data set generated for the insect family Cicadidae showed that these sequences were affecting some topological patterns and branch supports, although the effects were sometimes subtle, with some contamination-influenced relationships exhibiting strong bootstrap support. Long tip branches and outlier values for one anchored phylogenomic pipeline statistic (AvgNHomologs) were correlated with the presence of contamination.
- Full Text:
- Authors: Owen, Christopher L , Marshall, David C , Wade, Elizabeth J , Meister, Russ , Goemans, Geert , Kunte, Krushnamegh , Moulds, Max , Hill, Kathy , Villet, Martin H , Pham, Thai-Hong , Kortyna, Michelle , Lemmon, Emily M , Lemmon, Alan R , Simon, Chris
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440749 , vital:73809 , https://doi.org/10.1093/sysbio/syac043
- Description: Contamination of a genetic sample with DNA from one or more nontarget species is a continuing concern of molecular phylogenetic studies, both Sanger sequencing studies and next-generation sequencing studies. We developed an automated pipeline for identifying and excluding likely cross-contaminated loci based on the detection of bimodal distributions of patristic distances across gene trees. When contamination occurs between samples within a data set, a comparison between a contaminated sample and its contaminant taxon will yield bimodal distributions with one peak close to zero patristic distance. This new method does not rely on a priori knowledge of taxon relatedness nor does it determine the causes(s) of the contamination. Exclusion of putatively contaminated loci from a data set generated for the insect family Cicadidae showed that these sequences were affecting some topological patterns and branch supports, although the effects were sometimes subtle, with some contamination-influenced relationships exhibiting strong bootstrap support. Long tip branches and outlier values for one anchored phylogenomic pipeline statistic (AvgNHomologs) were correlated with the presence of contamination.
- Full Text:
Developing Relationships for Community-Based Research at Rhodes University: Values, Principles and Challenges
- Rouillard, Tessa, Deponselle, Keagan, Bezerra, Joana C
- Authors: Rouillard, Tessa , Deponselle, Keagan , Bezerra, Joana C
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426430 , vital:72352 , xlink:href="https://doi.org/10.3390/su142315525"
- Description: In addition to providing benefits to people, protected areas are valued in ways that go beyond the tangible. A sense of place, and the collection of values, feelings, and meanings associated with a place, can illuminate people-place relationships. Understanding how people relate to a place is essential in acquiring support for protected areas. This research investigates tourists’ and residents’ sense of place in Knysna, an open-access section of the Garden Route National Park, South Africa. Data was collected through questionnaires and semi-structured interviews. The sense of place was characterised using five variables: physical, cultural, social, dependent, and ideological. Although ‘physical’ was the dominant variable for both tourists and residents, the ‘ideological’ for residents and the ‘cultural’ for tourists came second, highlighting the importance of safe places and recreational activities, respectively. The physical environment influences sense of place, and the importance of protected areas to stakeholders offers an opportunity for management to engage with the public.
- Full Text:
- Authors: Rouillard, Tessa , Deponselle, Keagan , Bezerra, Joana C
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426430 , vital:72352 , xlink:href="https://doi.org/10.3390/su142315525"
- Description: In addition to providing benefits to people, protected areas are valued in ways that go beyond the tangible. A sense of place, and the collection of values, feelings, and meanings associated with a place, can illuminate people-place relationships. Understanding how people relate to a place is essential in acquiring support for protected areas. This research investigates tourists’ and residents’ sense of place in Knysna, an open-access section of the Garden Route National Park, South Africa. Data was collected through questionnaires and semi-structured interviews. The sense of place was characterised using five variables: physical, cultural, social, dependent, and ideological. Although ‘physical’ was the dominant variable for both tourists and residents, the ‘ideological’ for residents and the ‘cultural’ for tourists came second, highlighting the importance of safe places and recreational activities, respectively. The physical environment influences sense of place, and the importance of protected areas to stakeholders offers an opportunity for management to engage with the public.
- Full Text:
Double stimulation and transformative agency for leadership development of school learners in Southern Africa
- Authors: Grant, Carolyn
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/281035 , vital:55685 , xlink:href="https://doi.org/10.1080/14681366.2020.1805495"
- Description: Learners, because of their minor status, are a virtual absence in everyday school leadership work, particularly on the African continent. School leadership, therefore, continues to be misconceived as an adult phenomenon. Framed by Cultural Historical Activity Theory, this paper reports on a Southern African Higher Education studythat engages with the Vygotskian principle of ‘double stimulation’ and its relationship to transformative agency in the context of a school-based learner leadership development initiative. One school change project was purposively selected as the case, and data were drawn from a postgraduate student research report and self-reflective journal. Drawing on the Sannino model of double stimulation, the paper explores the phases of double stimulation as well as instances of transformative agency evident in the data, and speculates about the relationship between double stimulation and transformative agency in the leadership development of learners.
- Full Text:
- Authors: Grant, Carolyn
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/281035 , vital:55685 , xlink:href="https://doi.org/10.1080/14681366.2020.1805495"
- Description: Learners, because of their minor status, are a virtual absence in everyday school leadership work, particularly on the African continent. School leadership, therefore, continues to be misconceived as an adult phenomenon. Framed by Cultural Historical Activity Theory, this paper reports on a Southern African Higher Education studythat engages with the Vygotskian principle of ‘double stimulation’ and its relationship to transformative agency in the context of a school-based learner leadership development initiative. One school change project was purposively selected as the case, and data were drawn from a postgraduate student research report and self-reflective journal. Drawing on the Sannino model of double stimulation, the paper explores the phases of double stimulation as well as instances of transformative agency evident in the data, and speculates about the relationship between double stimulation and transformative agency in the leadership development of learners.
- Full Text:
Drowning in data, thirsty for information and starved for understanding: A biodiversity information hub for cooperative environmental monitoring in South Africa
- MacFadyen, Sandra, Allsopp, Nicky, Altwegg, Res, Archibald, Sally, Botha, Judith, Bradshaw, Karen L, Carruthers, Jane, De Klerk, Helen, de Vos, Alta, Distiller, Greg, Foord, Stefan, Freitag-Ronaldson, Stefanie, Gibbs, Richard, Hamer, Michelle, Landi, Pietro, MacFayden, Duncan, Manuel, Jeffrey, Midgley, Guy, Moncrieff, Glenn, Munch, Zahn, Mutanga, Onisimo, Sershen, Nenguda, Rendani, Ngwenya, Mzabalazo, Parker, Daniel M, Peel, Mike, Power, John, Pretorius, Joachim, Ramdhani, Syd, Robertson, Mark P, Rushworth, Ian, Skowno, Andrew, Slingsby, Jasper, Turner, Andrew, Visser, Vernon, van Wageningen, Gerhard, Hui, Cang
- Authors: MacFadyen, Sandra , Allsopp, Nicky , Altwegg, Res , Archibald, Sally , Botha, Judith , Bradshaw, Karen L , Carruthers, Jane , De Klerk, Helen , de Vos, Alta , Distiller, Greg , Foord, Stefan , Freitag-Ronaldson, Stefanie , Gibbs, Richard , Hamer, Michelle , Landi, Pietro , MacFayden, Duncan , Manuel, Jeffrey , Midgley, Guy , Moncrieff, Glenn , Munch, Zahn , Mutanga, Onisimo , Sershen , Nenguda, Rendani , Ngwenya, Mzabalazo , Parker, Daniel M , Peel, Mike , Power, John , Pretorius, Joachim , Ramdhani, Syd , Robertson, Mark P , Rushworth, Ian , Skowno, Andrew , Slingsby, Jasper , Turner, Andrew , Visser, Vernon , van Wageningen, Gerhard , Hui, Cang
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/415624 , vital:71271 , xlink:href="https://doi.org/10.1016/j.biocon.2022.109736"
- Description: The world is firmly cemented in a notitian age (Latin: notitia, meaning data) – drowning in data, yet thirsty for information and the synthesis of knowledge into understanding. As concerns over biodiversity declines escalate, the volume, diversity and speed at which new environmental and ecological data are generated has increased exponentially. Data availability primes the research and discovery engine driving biodiversity conservation. South Africa (SA) is poised to become a world leader in biodiversity conservation. However, continent-wide resource limitations hamper the establishment of inclusive technologies and robust platforms and tools for biodiversity informatics. In this perspectives piece, we bring together the opinions of 37 co-authors from 20 different departments, across 10 SA universities, 7 national and provincial conservation research agencies, and various institutes and private conservation, research and management bodies, to develop a way forward for biodiversity informatics in SA. We propose the development of a SA Biodiversity Informatics Hub and describe the essential components necessary for its design, implementation and sustainability. We emphasise the importance of developing a culture of cooperation, collaboration and interoperability among custodians of biodiversity data to establish operational workflows for data synthesis. However, our biggest challenges are misgivings around data sharing and multidisciplinary collaboration.
- Full Text:
- Authors: MacFadyen, Sandra , Allsopp, Nicky , Altwegg, Res , Archibald, Sally , Botha, Judith , Bradshaw, Karen L , Carruthers, Jane , De Klerk, Helen , de Vos, Alta , Distiller, Greg , Foord, Stefan , Freitag-Ronaldson, Stefanie , Gibbs, Richard , Hamer, Michelle , Landi, Pietro , MacFayden, Duncan , Manuel, Jeffrey , Midgley, Guy , Moncrieff, Glenn , Munch, Zahn , Mutanga, Onisimo , Sershen , Nenguda, Rendani , Ngwenya, Mzabalazo , Parker, Daniel M , Peel, Mike , Power, John , Pretorius, Joachim , Ramdhani, Syd , Robertson, Mark P , Rushworth, Ian , Skowno, Andrew , Slingsby, Jasper , Turner, Andrew , Visser, Vernon , van Wageningen, Gerhard , Hui, Cang
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/415624 , vital:71271 , xlink:href="https://doi.org/10.1016/j.biocon.2022.109736"
- Description: The world is firmly cemented in a notitian age (Latin: notitia, meaning data) – drowning in data, yet thirsty for information and the synthesis of knowledge into understanding. As concerns over biodiversity declines escalate, the volume, diversity and speed at which new environmental and ecological data are generated has increased exponentially. Data availability primes the research and discovery engine driving biodiversity conservation. South Africa (SA) is poised to become a world leader in biodiversity conservation. However, continent-wide resource limitations hamper the establishment of inclusive technologies and robust platforms and tools for biodiversity informatics. In this perspectives piece, we bring together the opinions of 37 co-authors from 20 different departments, across 10 SA universities, 7 national and provincial conservation research agencies, and various institutes and private conservation, research and management bodies, to develop a way forward for biodiversity informatics in SA. We propose the development of a SA Biodiversity Informatics Hub and describe the essential components necessary for its design, implementation and sustainability. We emphasise the importance of developing a culture of cooperation, collaboration and interoperability among custodians of biodiversity data to establish operational workflows for data synthesis. However, our biggest challenges are misgivings around data sharing and multidisciplinary collaboration.
- Full Text:
Drug Resistance in the HIV-1 Subtype C Protease Enzyme: A High Throughput Virtual Screening Approach in Search of New Ligands with Activity
- Sarron, Arthur F D, Lobb, Kevin A
- Authors: Sarron, Arthur F D , Lobb, Kevin A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/452699 , vital:75163 , xlink:href="10.2174/1871520622666220202161543"
- Description: Background: HIV-1 subtype C protease is a strategic target for antiretroviral treatment. However, resistance to protease inhibi-tors appears after months of treatment. Chromones and 2- bis-coumarin derivatives show potential for inhibition of the HIV- subtype C protease. Objective: Different heterocyclic structures from the ZINC database were docked against Human Immuno-deficiency Virus-1 (HIV) subtype C protease crystal structure 2R5Q and 2R5P. The 5 best molecules were selected to be docked against 62 homology models based on HIV-protease se-quences from infants failing antiretroviral protease treatment. This experimentation was performed with two molecular docking programs: Autodock and Autodock Vina. These molecules were modified by substituting protons with different moieties, and the derivatives were docked against the same targets. Ligand-protein interactions, physical/chemical proprieties of the mole-cules, and dynamics simulations were analyzed.
- Full Text:
- Authors: Sarron, Arthur F D , Lobb, Kevin A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/452699 , vital:75163 , xlink:href="10.2174/1871520622666220202161543"
- Description: Background: HIV-1 subtype C protease is a strategic target for antiretroviral treatment. However, resistance to protease inhibi-tors appears after months of treatment. Chromones and 2- bis-coumarin derivatives show potential for inhibition of the HIV- subtype C protease. Objective: Different heterocyclic structures from the ZINC database were docked against Human Immuno-deficiency Virus-1 (HIV) subtype C protease crystal structure 2R5Q and 2R5P. The 5 best molecules were selected to be docked against 62 homology models based on HIV-protease se-quences from infants failing antiretroviral protease treatment. This experimentation was performed with two molecular docking programs: Autodock and Autodock Vina. These molecules were modified by substituting protons with different moieties, and the derivatives were docked against the same targets. Ligand-protein interactions, physical/chemical proprieties of the mole-cules, and dynamics simulations were analyzed.
- Full Text:
Ecosystem for 4th industrial revolution to accelerate sustainable development goals in the South Africa’,‘n context: a conceptual framework
- Diale, Dineo, Kanakana-Katumba, Mukondeleli G, Maladzhi, Rendani W, von der Ohe, Hartmut
- Authors: Diale, Dineo , Kanakana-Katumba, Mukondeleli G , Maladzhi, Rendani W , von der Ohe, Hartmut
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/450592 , vital:74963 , xlink:href="https://ieomsociety.org/proceedings/2022nigeria/11.pdf"
- Description: Contextualizing technology and digitalization in a period of having to meet sustainable development goals (SDGs), requires a paradigm shift which calls for collaboration from multiple stakeholders. The current turbulent environment requires an investigation into ways of adopting the Fourth Industrial Revolution (4IR) as a pertinent mechanism for accelerating sustainable development goals. The need to formulate a conceptual framework and adapt it to the South African context, requires careful mapping of the elements of 4IR, the relevant infrastructure and resources There has been perceptions instigating resistance towards the SDGs, hence the need to develop the conceptual framework. The exploratory research method fitted well as its nature a systematic review to effect and respond to the abovementioned investigation. The study reviewed about 70 articles of which 53 of those were peerreviewed articles within 4th industrial revolution in South Africa as set for ecosystem. Due to limited research on the topic, possible impacting variables that added immeasurable value were explored as contributing factors the study. Both reviewed literature and government archive on 4th industrial revolution revealed how the ecosystems of 4IR accelerated the achievement of SDGs in South Africa. The study further singled smart factories, smart cities, integrated systems, green technologies, cybernetics, the internet of people, the internet of energy, and the internet of things as contributing factors towards 4IR. The recommended the applicability of the ecosystems onto the South African context to advance innovation agenda to achieve green energy, sustainable water provision, waste management, trade in low-carbon products, cleaner and greener technologies, green buildings, green chemistry and sustainable transport, as well as improved air quality.
- Full Text:
- Authors: Diale, Dineo , Kanakana-Katumba, Mukondeleli G , Maladzhi, Rendani W , von der Ohe, Hartmut
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/450592 , vital:74963 , xlink:href="https://ieomsociety.org/proceedings/2022nigeria/11.pdf"
- Description: Contextualizing technology and digitalization in a period of having to meet sustainable development goals (SDGs), requires a paradigm shift which calls for collaboration from multiple stakeholders. The current turbulent environment requires an investigation into ways of adopting the Fourth Industrial Revolution (4IR) as a pertinent mechanism for accelerating sustainable development goals. The need to formulate a conceptual framework and adapt it to the South African context, requires careful mapping of the elements of 4IR, the relevant infrastructure and resources There has been perceptions instigating resistance towards the SDGs, hence the need to develop the conceptual framework. The exploratory research method fitted well as its nature a systematic review to effect and respond to the abovementioned investigation. The study reviewed about 70 articles of which 53 of those were peerreviewed articles within 4th industrial revolution in South Africa as set for ecosystem. Due to limited research on the topic, possible impacting variables that added immeasurable value were explored as contributing factors the study. Both reviewed literature and government archive on 4th industrial revolution revealed how the ecosystems of 4IR accelerated the achievement of SDGs in South Africa. The study further singled smart factories, smart cities, integrated systems, green technologies, cybernetics, the internet of people, the internet of energy, and the internet of things as contributing factors towards 4IR. The recommended the applicability of the ecosystems onto the South African context to advance innovation agenda to achieve green energy, sustainable water provision, waste management, trade in low-carbon products, cleaner and greener technologies, green buildings, green chemistry and sustainable transport, as well as improved air quality.
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Electrocatalytic activity of benzothiazole substituted cobalt phthalocyanine in the presence of detonation nanodiamonds
- Ncwane, Lunathi, Mpeta, Lekhetho S, Nyokong, Tebello
- Authors: Ncwane, Lunathi , Mpeta, Lekhetho S , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295753 , vital:57375 , xlink:href="https://doi.org/10.1016/j.diamond.2022.109319"
- Description: This work reports on the synthesis and electrochemical sensing properties of benzothiazole substituted cobalt phthalocyanine (CoPc) when π-π stacked on detonation nanodiamonds (to form CoPc-DNDs(ππ). The synthesized materials were characterized using UV–visible, mass, Fourier transform infrared, and Raman spectroscopies as well as transmission electron microscopy and dynamic light scattering. The electrochemical studies were conducted using cyclic voltammetry, electrochemical impedance spectroscopy and chronoamperometry. Hydrazine was utilized as an analyte of interest, due to its mutagenic and carcinogenic effects. Glassy carbon electrodes (GCE) were modified with DNDs, CoPc, and CoPc-DNDs(ππ) represented as GCE/DNDs, GCE/CoPc and GCE/ CoPc-DNDs(ππ). GCE was also modified sequential addition of the CoPc and DNDs onto the GCE, represented as GCE/CoPc-DNDs(seq) when CoPc is placed before DNDs on the electrode and GCE/DNDs-CoPc(seq) when DNDs are placed before CoPc, where seq represents sequential. GCE/CoPc-DNDs(ππ) electrode gave better results in terms of limit of detection (1.68 μM), sensitivity (9.59 μA.mM−1) and catalytic rate constant (1.25 × 106 M−1 s−1).
- Full Text:
- Authors: Ncwane, Lunathi , Mpeta, Lekhetho S , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295753 , vital:57375 , xlink:href="https://doi.org/10.1016/j.diamond.2022.109319"
- Description: This work reports on the synthesis and electrochemical sensing properties of benzothiazole substituted cobalt phthalocyanine (CoPc) when π-π stacked on detonation nanodiamonds (to form CoPc-DNDs(ππ). The synthesized materials were characterized using UV–visible, mass, Fourier transform infrared, and Raman spectroscopies as well as transmission electron microscopy and dynamic light scattering. The electrochemical studies were conducted using cyclic voltammetry, electrochemical impedance spectroscopy and chronoamperometry. Hydrazine was utilized as an analyte of interest, due to its mutagenic and carcinogenic effects. Glassy carbon electrodes (GCE) were modified with DNDs, CoPc, and CoPc-DNDs(ππ) represented as GCE/DNDs, GCE/CoPc and GCE/ CoPc-DNDs(ππ). GCE was also modified sequential addition of the CoPc and DNDs onto the GCE, represented as GCE/CoPc-DNDs(seq) when CoPc is placed before DNDs on the electrode and GCE/DNDs-CoPc(seq) when DNDs are placed before CoPc, where seq represents sequential. GCE/CoPc-DNDs(ππ) electrode gave better results in terms of limit of detection (1.68 μM), sensitivity (9.59 μA.mM−1) and catalytic rate constant (1.25 × 106 M−1 s−1).
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Electrochemical detection of human epidermal growth factor receptor 2 using an aptamer on cobalt phthalocyanines–Cerium oxide nanoparticle conjugate
- Centane, Sixolile, Mgidlana, Sithi, Openda, Yolanda, Nyokong, Tebello
- Authors: Centane, Sixolile , Mgidlana, Sithi , Openda, Yolanda , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/299835 , vital:57859 , xlink:href="https://doi.org/10.1016/j.bioelechem.2022.108146"
- Description: The role of the biointerface design towards the development of an impedimetric biosensor for the electrochemical detection of human epidermal growth factor receptor 2 (HER2) is investigated. Two novel cobalt phthalocyanines: cobalt tetraphenyl acetic acid phthalocyanine and cobalt tetraphenyl propionic acid phthalocyanine are compared as signal amplifiers and immobilization platforms of the HB5 aptamer towards the electrochemical detection of HER2. In addition, the phthalocyanines are coupled with the metal based cerium oxide nanoparticles. The efficiency of each electrode modification step and the performance of the constructed aptasensors were assessed by impedance spectroscopy. The aptasensors showed very low limit of detection values (all less than 0.2 ng/mL) with high sensitivity and stability. Furthermore, the aptasensors showed very good performance even in human serum samples. Considering these results, the aptasensors demonstrate great potential for improved monitoring of human epidermal growth factor receptor 2 levels for the management of breast cancers.
- Full Text:
- Authors: Centane, Sixolile , Mgidlana, Sithi , Openda, Yolanda , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/299835 , vital:57859 , xlink:href="https://doi.org/10.1016/j.bioelechem.2022.108146"
- Description: The role of the biointerface design towards the development of an impedimetric biosensor for the electrochemical detection of human epidermal growth factor receptor 2 (HER2) is investigated. Two novel cobalt phthalocyanines: cobalt tetraphenyl acetic acid phthalocyanine and cobalt tetraphenyl propionic acid phthalocyanine are compared as signal amplifiers and immobilization platforms of the HB5 aptamer towards the electrochemical detection of HER2. In addition, the phthalocyanines are coupled with the metal based cerium oxide nanoparticles. The efficiency of each electrode modification step and the performance of the constructed aptasensors were assessed by impedance spectroscopy. The aptasensors showed very low limit of detection values (all less than 0.2 ng/mL) with high sensitivity and stability. Furthermore, the aptasensors showed very good performance even in human serum samples. Considering these results, the aptasensors demonstrate great potential for improved monitoring of human epidermal growth factor receptor 2 levels for the management of breast cancers.
- Full Text:
Enacting Environmental Ethics Education for Wildlife Conservation using an Afrophilic ‘Philosophy for Children’approach
- Authors: Bhurekeni, John
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/389821 , vital:68487 , xlink:href="https://www.ajol.info/index.php/sajee/article/view/224689"
- Description: Environmental Ethics Education has in recent years emerged as a critical tool for wildlife conservation research. Despite this, Environmental Ethics Education is paradoxically predominated by traditional forms of western science such as the concept of the Anthropocene which appears to exclude aspects of African life-worlds where the natural environment is considered a heritage component and is linked to onto-ethical understandings of human existence. The purpose of this study is to explore how African heritage-based knowledges and practices are understood by children who identify and understand the relevance of their totems and taboos associated with them, in relation to wildlife conservation. The study from which this paper is derived utilised formative interventionist methodology complemented by a multi-voiced decolonial approach to explore whether children-participants aged 8 to 11 years understand the purposes of their totems and associated taboos. To achieve this I used an Afrophilic Philosophy for Children pedagogical approach, which foregrounds dialogical learning and development of critical reflexive thinking skills. Emerging findings indicated that children associated their totems and connected taboos as tools for protection against environmental pollution and for minimising resource over-extraction. Findings further demonstrated improved learner agency and development of ethical reasoning among children. As participants’ respect for environmental conservation and sustainability was informed by the significance placed on their totems, I recommend the need for schools to develop generative curricula that take seriously context-based solutions to environmental problems. Future research should also consider understanding environmental conservation issues from a context-based perspective, which can inform existing heritage practices and pedagogies.
- Full Text:
- Authors: Bhurekeni, John
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/389821 , vital:68487 , xlink:href="https://www.ajol.info/index.php/sajee/article/view/224689"
- Description: Environmental Ethics Education has in recent years emerged as a critical tool for wildlife conservation research. Despite this, Environmental Ethics Education is paradoxically predominated by traditional forms of western science such as the concept of the Anthropocene which appears to exclude aspects of African life-worlds where the natural environment is considered a heritage component and is linked to onto-ethical understandings of human existence. The purpose of this study is to explore how African heritage-based knowledges and practices are understood by children who identify and understand the relevance of their totems and taboos associated with them, in relation to wildlife conservation. The study from which this paper is derived utilised formative interventionist methodology complemented by a multi-voiced decolonial approach to explore whether children-participants aged 8 to 11 years understand the purposes of their totems and associated taboos. To achieve this I used an Afrophilic Philosophy for Children pedagogical approach, which foregrounds dialogical learning and development of critical reflexive thinking skills. Emerging findings indicated that children associated their totems and connected taboos as tools for protection against environmental pollution and for minimising resource over-extraction. Findings further demonstrated improved learner agency and development of ethical reasoning among children. As participants’ respect for environmental conservation and sustainability was informed by the significance placed on their totems, I recommend the need for schools to develop generative curricula that take seriously context-based solutions to environmental problems. Future research should also consider understanding environmental conservation issues from a context-based perspective, which can inform existing heritage practices and pedagogies.
- Full Text:
Enhanced mitochondria destruction on MCF-7 and HeLa cell lines in vitro using triphenyl-phosphonium-labelled phthalocyanines in ultrasound-assisted photodynamic therapy activity
- Nene, Lindokuhle Cindy, Magadla, Aviwe, Nyokong, Tebello
- Authors: Nene, Lindokuhle Cindy , Magadla, Aviwe , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295766 , vital:57376 , xlink:href="https://doi.org/10.1016/j.jphotobiol.2022.112553"
- Description: This work reports on the reactive oxygen species (ROS) generation and the therapeutic activities of new triphenyl-phosphonium-labelled phthalocyanines (Pcs), the 2,9,16,23-tetrakis(N-(N-butyl-4-triphenyl-phosphonium)- pyridine-4-yloxy) Zn(II) Pc (3) and 2,9,16,23-tetrakis-(N-(N-butyl-4-triphenyl-phosphonium)-morpholino) Zn(II) Pc (4) upon exposure to light, ultrasound and the combination of light and ultrasound. Two types of ROS were detected: the singlet oxygen (1O2) and hydroxyl radicals. For light irradiations, only the 1O2 was detected. An increase in the ROS generation was observed for samples treated with the combination of light and ultrasound compared to the light and ultrasound mono-treatments. The in vitro anticancer activity through photodynamic (PDT) and sonodynamic (SDT) therapy for the Pcs were also determined and compared to the photo-sonodynamic combination therapy (PSDT). The two cancer cell lines used for the in vitro studies included the Michigan Cancer Foundation-7 (MCF-7) breast cancer and Henrietta Lacks (HeLa) cervical cancer cell lines. The SDT treatments showed improved therapeutic efficacy on the cancer cells for both the Pcs compared to PDT. PSDT showed better therapeutic efficacy compared to both the PDT and SDT mono-treatments.
- Full Text:
- Authors: Nene, Lindokuhle Cindy , Magadla, Aviwe , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295766 , vital:57376 , xlink:href="https://doi.org/10.1016/j.jphotobiol.2022.112553"
- Description: This work reports on the reactive oxygen species (ROS) generation and the therapeutic activities of new triphenyl-phosphonium-labelled phthalocyanines (Pcs), the 2,9,16,23-tetrakis(N-(N-butyl-4-triphenyl-phosphonium)- pyridine-4-yloxy) Zn(II) Pc (3) and 2,9,16,23-tetrakis-(N-(N-butyl-4-triphenyl-phosphonium)-morpholino) Zn(II) Pc (4) upon exposure to light, ultrasound and the combination of light and ultrasound. Two types of ROS were detected: the singlet oxygen (1O2) and hydroxyl radicals. For light irradiations, only the 1O2 was detected. An increase in the ROS generation was observed for samples treated with the combination of light and ultrasound compared to the light and ultrasound mono-treatments. The in vitro anticancer activity through photodynamic (PDT) and sonodynamic (SDT) therapy for the Pcs were also determined and compared to the photo-sonodynamic combination therapy (PSDT). The two cancer cell lines used for the in vitro studies included the Michigan Cancer Foundation-7 (MCF-7) breast cancer and Henrietta Lacks (HeLa) cervical cancer cell lines. The SDT treatments showed improved therapeutic efficacy on the cancer cells for both the Pcs compared to PDT. PSDT showed better therapeutic efficacy compared to both the PDT and SDT mono-treatments.
- Full Text:
Enhanced Solar Efficiency via Incorporation of Plasmonic Gold Nanostructures in a Titanium Oxide/Eosin Y Dye-Sensitized Solar Cell
- Nyembe, Sanele, Chindeka, Francis, Ndlovu, Gebhu, Mkhohlakali, Andile, Nyokong, Tebello, Sikhwiyhilu, Lucy
- Authors: Nyembe, Sanele , Chindeka, Francis , Ndlovu, Gebhu , Mkhohlakali, Andile , Nyokong, Tebello , Sikhwiyhilu, Lucy
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295783 , vital:57377 , xlink:href="https://doi.org/10.3390/nano12101715"
- Description: Plasmonic gold nanoparticles significantly improved the efficiency of a TiO2 and Eosin Y based dye-sensitized solar cell from 2.4 to 6.43%. The gold nanoparticles’ sizes that were tested were 14 nm, 30 nm and 40 nm synthesized via the systematic reduction of citrate concentration using the Turkevich method. Prestine TiO2 without plasmonic gold nanoparticles yielded an efficiency of 2.4%. However, the loading of 40 nm gold nanoparticles into the TiO2 matrix yielded the highest DSSC efficiency of 6.43% compared to 30 nm (5.91%) and 14 nm (2.6%). The relatively high efficiency demonstrated by plasmonic gold nanoparticles is ascribed to light absorption/scattering, hot electron injection and plasmon-induced resonance energy transfer (PIRET), influenced by the size of the gold nanoparticles.
- Full Text:
- Authors: Nyembe, Sanele , Chindeka, Francis , Ndlovu, Gebhu , Mkhohlakali, Andile , Nyokong, Tebello , Sikhwiyhilu, Lucy
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295783 , vital:57377 , xlink:href="https://doi.org/10.3390/nano12101715"
- Description: Plasmonic gold nanoparticles significantly improved the efficiency of a TiO2 and Eosin Y based dye-sensitized solar cell from 2.4 to 6.43%. The gold nanoparticles’ sizes that were tested were 14 nm, 30 nm and 40 nm synthesized via the systematic reduction of citrate concentration using the Turkevich method. Prestine TiO2 without plasmonic gold nanoparticles yielded an efficiency of 2.4%. However, the loading of 40 nm gold nanoparticles into the TiO2 matrix yielded the highest DSSC efficiency of 6.43% compared to 30 nm (5.91%) and 14 nm (2.6%). The relatively high efficiency demonstrated by plasmonic gold nanoparticles is ascribed to light absorption/scattering, hot electron injection and plasmon-induced resonance energy transfer (PIRET), influenced by the size of the gold nanoparticles.
- Full Text:
Fabrication of asymmetrical morpholine phthalocyanines conjugated chitosan-polyacrylonitrile nanofibers for improved photodynamic antimicrobial chemotherapy activity
- Sindelo, Azole, Mafukidze, Donovan M, Nyokong, Tebello
- Authors: Sindelo, Azole , Mafukidze, Donovan M , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229873 , vital:49719 , xlink:href="https://doi.org/10.1016/j.pdpdt.2022.102760"
- Description: The work is based on the synthesis and photodynamic antimicrobial chemotherapy (PACT) activities of neutral (1 and 2) and cationic (1Q and 2Q) morpholine substituted phthalocyanines. For applicability, these complexes were covalently linked to modified polyacrylonitrile (PAN) to form 1-PAN, 2-PAN, 1Q-PAN, and 2Q-PAN, respectively. Chitosan was conjugated to PAN (to form PAN-CS) which was then linked to the Pcs to form PAN-CS-1, PAN-CS-2, PAN-CS-1Q, and PAN-CS-2Q, respectively. Singlet oxygen quantum yields improved following the inclusion of chitosan. The PACT activities of the complexes alone and when anchored to both PAN and PAN-CS was evaluated against bacteria: S. aureus, E. coli and fungi C. albicans. Cationic phthalocyanine showed high efficacy values of >7 log reduction value for all microorganisms. These results translated into excellent bacterial colony reduction of >90% against both S. aureus and C. albicans after 1 h of photoirradiation on PAN-CS support.
- Full Text:
- Authors: Sindelo, Azole , Mafukidze, Donovan M , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229873 , vital:49719 , xlink:href="https://doi.org/10.1016/j.pdpdt.2022.102760"
- Description: The work is based on the synthesis and photodynamic antimicrobial chemotherapy (PACT) activities of neutral (1 and 2) and cationic (1Q and 2Q) morpholine substituted phthalocyanines. For applicability, these complexes were covalently linked to modified polyacrylonitrile (PAN) to form 1-PAN, 2-PAN, 1Q-PAN, and 2Q-PAN, respectively. Chitosan was conjugated to PAN (to form PAN-CS) which was then linked to the Pcs to form PAN-CS-1, PAN-CS-2, PAN-CS-1Q, and PAN-CS-2Q, respectively. Singlet oxygen quantum yields improved following the inclusion of chitosan. The PACT activities of the complexes alone and when anchored to both PAN and PAN-CS was evaluated against bacteria: S. aureus, E. coli and fungi C. albicans. Cationic phthalocyanine showed high efficacy values of >7 log reduction value for all microorganisms. These results translated into excellent bacterial colony reduction of >90% against both S. aureus and C. albicans after 1 h of photoirradiation on PAN-CS support.
- Full Text: