Characterization of the co-chaperones of Hsp70 and Hsp90 in Trypanosoma brucei and their potential partnerships
- Authors: Mokoena, Fortunate
- Date: 2015
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/54543 , vital:26583
- Description: African Trypanosomiasis, which is caused by Trypanosoma brucei, is one of the crippling agents of social and economic development in Africa. T. brucei cycles between the cold-blooded insect vector, the tsetse fly (Glossina spp), and warm-blooded mammalian hosts. T. brucei, T. cruzi and L. major are mammal infecting kinetoplastid parasites that are collectively referred to as TriTryps. These parasites experience extreme environments as they move between their warm-blooded mammalian hosts and cold-blooded insect vectors which trigger extensive morphological transformations during the life-cycle of the parasite. Molecular chaperones have been implicated in parasite differentiation. TriTryps display significant expansions and diversity in the gene complements encoding molecular chaperones, especially J-proteins. Generally, J-proteins function as co-chaperones of Hsp70s, forming part of vital protein homeostasis processes. Hsp70s show a high degree of conservation, while J-proteins appear to be an extreme case of taxonomic radiation. Although several studies have focused on the molecular and cell biology of Hsp70s in some kinetoplastid parasites, knowledge is still lacking pertaining to J-proteins and their partnerships with Hsp70s. This thesis focused on the classification of kinetoplastid Jproteins into the four types by examining the domain organizations using T. brucei as a guide. The potential partnership of J-proteins and Hsp70s were postulated based on predicted subcellular localization. Kinetoplastid parasites, particularly T. brucei, have evolved an expanded and specialized J-protein machinery, likely to be a consequence of an evolutionary fitness/trait to adapt to diverse environment present in hosts and vectors. These analyses will yield insight into the process of parasite differentiation as well as provide new leads for chemotherapeutic treatments. The presence of the STI1 mediated Hsp90 hetero-complex formation has not been confirmed in T. brucei. To this end, in silico and biochemical techniques were used to characterize the role of TbSTI1, as an adaptor protein of Hsp70 and Hsp90. Through domain architecture analysis, sequence alignments, phylogenetic analysis and three-dimensional structure prediction, TbSTI1 was demonstrated to be the most conserved TPR containing co-chaperone of Hsp70 and Hsp83 in T. brucei and also shown to be highly similar to its eukaryotic homologues. Recombinant TbSTI1 was overproduced and purified in E.coli cells and subsequently shown to associate with TcHsp70 in a concentration dependent manner and associate weakly with TbHsp70.4. TbSTI1 and TbHsp83 were also demonstrated to be expressed and upregulated upon exposure to heat shock at the bloodstream stage of parasite development. In conclusion, this study is the first to report the interaction of TbSTI1 with a chaperone. Interactions between TbSTI1 and Hsp70s were demonstrated and therefore, the formation of the hetero-complex is predicted based the similarity of TbSTI1 to other STI1 proteins.
- Full Text:
- Authors: Mokoena, Fortunate
- Date: 2015
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/54543 , vital:26583
- Description: African Trypanosomiasis, which is caused by Trypanosoma brucei, is one of the crippling agents of social and economic development in Africa. T. brucei cycles between the cold-blooded insect vector, the tsetse fly (Glossina spp), and warm-blooded mammalian hosts. T. brucei, T. cruzi and L. major are mammal infecting kinetoplastid parasites that are collectively referred to as TriTryps. These parasites experience extreme environments as they move between their warm-blooded mammalian hosts and cold-blooded insect vectors which trigger extensive morphological transformations during the life-cycle of the parasite. Molecular chaperones have been implicated in parasite differentiation. TriTryps display significant expansions and diversity in the gene complements encoding molecular chaperones, especially J-proteins. Generally, J-proteins function as co-chaperones of Hsp70s, forming part of vital protein homeostasis processes. Hsp70s show a high degree of conservation, while J-proteins appear to be an extreme case of taxonomic radiation. Although several studies have focused on the molecular and cell biology of Hsp70s in some kinetoplastid parasites, knowledge is still lacking pertaining to J-proteins and their partnerships with Hsp70s. This thesis focused on the classification of kinetoplastid Jproteins into the four types by examining the domain organizations using T. brucei as a guide. The potential partnership of J-proteins and Hsp70s were postulated based on predicted subcellular localization. Kinetoplastid parasites, particularly T. brucei, have evolved an expanded and specialized J-protein machinery, likely to be a consequence of an evolutionary fitness/trait to adapt to diverse environment present in hosts and vectors. These analyses will yield insight into the process of parasite differentiation as well as provide new leads for chemotherapeutic treatments. The presence of the STI1 mediated Hsp90 hetero-complex formation has not been confirmed in T. brucei. To this end, in silico and biochemical techniques were used to characterize the role of TbSTI1, as an adaptor protein of Hsp70 and Hsp90. Through domain architecture analysis, sequence alignments, phylogenetic analysis and three-dimensional structure prediction, TbSTI1 was demonstrated to be the most conserved TPR containing co-chaperone of Hsp70 and Hsp83 in T. brucei and also shown to be highly similar to its eukaryotic homologues. Recombinant TbSTI1 was overproduced and purified in E.coli cells and subsequently shown to associate with TcHsp70 in a concentration dependent manner and associate weakly with TbHsp70.4. TbSTI1 and TbHsp83 were also demonstrated to be expressed and upregulated upon exposure to heat shock at the bloodstream stage of parasite development. In conclusion, this study is the first to report the interaction of TbSTI1 with a chaperone. Interactions between TbSTI1 and Hsp70s were demonstrated and therefore, the formation of the hetero-complex is predicted based the similarity of TbSTI1 to other STI1 proteins.
- Full Text:
CHIP: a co-chaperone for degradation by the proteasome
- Authors: Edkins, Adrienne L
- Date: 2015
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/164863 , vital:41179 , ISBN 978-3-319-11730-0 , DOI: 10.1007/978-3-319-11731-7_11
- Description: Protein homeostasis relies on a balance between protein folding and protein degradation. Molecular chaperones like Hsp70 and Hsp90 fulfil well-defined roles in protein folding and conformational stability via ATP dependent reaction cycles. These folding cycles are controlled by associations with a cohort of non-client protein co-chaperones, such as Hop, p23 and Aha1. Pro-folding co-chaperones facilitate the transit of the client protein through the chaperone mediated folding process. However, chaperones are also involved in ubiquitin-mediated proteasomal degradation of client proteins. Similar to folding complexes, the ability of chaperones to mediate protein degradation is regulated by co-chaperones, such as the C terminal Hsp70 binding protein (CHIP).
- Full Text:
- Authors: Edkins, Adrienne L
- Date: 2015
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/164863 , vital:41179 , ISBN 978-3-319-11730-0 , DOI: 10.1007/978-3-319-11731-7_11
- Description: Protein homeostasis relies on a balance between protein folding and protein degradation. Molecular chaperones like Hsp70 and Hsp90 fulfil well-defined roles in protein folding and conformational stability via ATP dependent reaction cycles. These folding cycles are controlled by associations with a cohort of non-client protein co-chaperones, such as Hop, p23 and Aha1. Pro-folding co-chaperones facilitate the transit of the client protein through the chaperone mediated folding process. However, chaperones are also involved in ubiquitin-mediated proteasomal degradation of client proteins. Similar to folding complexes, the ability of chaperones to mediate protein degradation is regulated by co-chaperones, such as the C terminal Hsp70 binding protein (CHIP).
- Full Text:
Classification System for Wetlands and Other Aquatic Ecosystems in South Africa:
- Authors: Ellery, William F N
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/144454 , vital:38347 , https://doi.org/10.2989/10220119.2015.1025843
- Description: There have been several attempts to develop a wetland classification for South Africa, with merit in each, but a system that satisfies the needs of a wide range of professionals has been elusive. This is partly to be expected since classification systems are often user-specific. Nevertheless, and at last, the authors of Classification System for Wetlands and Other Aquatic Ecosystems in South Africa. User Manual: Inland Systems (SANBI Biodiversity Series 22) have developed a robust and comprehensive wetland classification system for South Africa that likely will have broad appeal and be widely used. Working for Wetlands, the Water Research Commission (WRC) and SANBI provided considerable support for the development of this system and there was expert input from a wide range of stakeholders.
- Full Text:
- Authors: Ellery, William F N
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/144454 , vital:38347 , https://doi.org/10.2989/10220119.2015.1025843
- Description: There have been several attempts to develop a wetland classification for South Africa, with merit in each, but a system that satisfies the needs of a wide range of professionals has been elusive. This is partly to be expected since classification systems are often user-specific. Nevertheless, and at last, the authors of Classification System for Wetlands and Other Aquatic Ecosystems in South Africa. User Manual: Inland Systems (SANBI Biodiversity Series 22) have developed a robust and comprehensive wetland classification system for South Africa that likely will have broad appeal and be widely used. Working for Wetlands, the Water Research Commission (WRC) and SANBI provided considerable support for the development of this system and there was expert input from a wide range of stakeholders.
- Full Text:
Comparative electrocatalytic studies of nanocomposites of mixed and covalently linked multiwalled carbon nanotubes and 4-(4, 6-diaminopyrimidin-2-ylthio) phthalocyaninato cobalt (II)
- Nyoni, Stephen, Nyokong, Tebello
- Authors: Nyoni, Stephen , Nyokong, Tebello
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/189285 , vital:44834 , xlink:href="https://doi.org/10.1016/j.poly.2015.05.038"
- Description: Electrocatalytic behavior of 4-(4,6-diaminopyrimidin-2-ylthio) phthalocyaninato cobalt(II) (CoPyPc) when mixed or covalently mixed to multiwalled carbon nanotubes (MWCNTs) is reported. Infra-red spectroscopy was used to confirm amide linkage of the covalently linked nanocomposite. Rotating disk electrode (RDE) and cyclic (CV) voltammetry studies were used for the electrochemical characterization of the prepared phthalocyanine and MWCNT nanocomposite. The electrocatalytic effects of the nanocomposites of the cobalt phthalocyanine derivative were then investigated towards L-cysteine oxidation using both RDE and CV experiments, and the electrocatalytic performance of the covalently linked cobalt phthalocyanine-MWCNT was found to be superior over the mixed nanocomposite.
- Full Text:
- Authors: Nyoni, Stephen , Nyokong, Tebello
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/189285 , vital:44834 , xlink:href="https://doi.org/10.1016/j.poly.2015.05.038"
- Description: Electrocatalytic behavior of 4-(4,6-diaminopyrimidin-2-ylthio) phthalocyaninato cobalt(II) (CoPyPc) when mixed or covalently mixed to multiwalled carbon nanotubes (MWCNTs) is reported. Infra-red spectroscopy was used to confirm amide linkage of the covalently linked nanocomposite. Rotating disk electrode (RDE) and cyclic (CV) voltammetry studies were used for the electrochemical characterization of the prepared phthalocyanine and MWCNT nanocomposite. The electrocatalytic effects of the nanocomposites of the cobalt phthalocyanine derivative were then investigated towards L-cysteine oxidation using both RDE and CV experiments, and the electrocatalytic performance of the covalently linked cobalt phthalocyanine-MWCNT was found to be superior over the mixed nanocomposite.
- Full Text:
Comparative photophysicochemical behavior of nanoconjugates of indium tetracarboxyphenoxy phthalocyanines covalently linked to CdTe/ZnSe/ZnO quantum dots
- Oluwole, David O, Nyokong, Tebello
- Authors: Oluwole, David O , Nyokong, Tebello
- Date: 2015
- Language: English
- Type: text , Article
- Identifier: vital:7294 , http://hdl.handle.net/10962/d1020357 , http://dx.doi.org/10.1016/j.jphotochem.2015.07.009
- Description: This work reports on the photophysicochemical behavior of different nanoconjugates of core/shell/shell (GSH-CdTe/ZnSe/ZnO), core/shell (GSH-CdTe/ZnSe) and core (GSH-CdTe) (quantum dots QDs) with indium tetracarboxyphenoxy phthalocyanines ((OH)InTCPPc) in dimethylsulfoxide. The fluorescence quantum yields (Φf) and lifetimes (τf, in brackets) of QDs ranged from 0.20 (13.9 ns) to 0.42 (25.6 ns). The highest Φf value was obtained for GSH-CdTe/ZnSe/ZnO (4.5) while the least was observed in GSH-CdTe/ZnSe/ZnO (7.6), the numbers in brackets refer to the sizes. For (OH)InTCPPc alone a Φf and τf values of 0.02 and 2.43 ns, respectively were obtained. In the nanoconjugates, pivotal decrease in the Φf and τf of the QDs were observed with increase in the triplet and singlet oxygen quantum yields of (OH)InTCPPc. , Original publication is available at http://dx.doi.org/10.1016/j.jphotochem.2015.07.009
- Full Text: false
- Authors: Oluwole, David O , Nyokong, Tebello
- Date: 2015
- Language: English
- Type: text , Article
- Identifier: vital:7294 , http://hdl.handle.net/10962/d1020357 , http://dx.doi.org/10.1016/j.jphotochem.2015.07.009
- Description: This work reports on the photophysicochemical behavior of different nanoconjugates of core/shell/shell (GSH-CdTe/ZnSe/ZnO), core/shell (GSH-CdTe/ZnSe) and core (GSH-CdTe) (quantum dots QDs) with indium tetracarboxyphenoxy phthalocyanines ((OH)InTCPPc) in dimethylsulfoxide. The fluorescence quantum yields (Φf) and lifetimes (τf, in brackets) of QDs ranged from 0.20 (13.9 ns) to 0.42 (25.6 ns). The highest Φf value was obtained for GSH-CdTe/ZnSe/ZnO (4.5) while the least was observed in GSH-CdTe/ZnSe/ZnO (7.6), the numbers in brackets refer to the sizes. For (OH)InTCPPc alone a Φf and τf values of 0.02 and 2.43 ns, respectively were obtained. In the nanoconjugates, pivotal decrease in the Φf and τf of the QDs were observed with increase in the triplet and singlet oxygen quantum yields of (OH)InTCPPc. , Original publication is available at http://dx.doi.org/10.1016/j.jphotochem.2015.07.009
- Full Text: false
Comparisons of isotopic niche widths of some invasive and indigenous fauna in a South African river
- Hill, Jaclyn M, Jones, Roy W, Hill, Martin P, Weyl, Olaf L F
- Authors: Hill, Jaclyn M , Jones, Roy W , Hill, Martin P , Weyl, Olaf L F
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/423711 , vital:72088 , xlink:href="https://doi.org/10.1111/fwb.12542"
- Description: Biological invasions threaten ecosystem integrity and bio-diversity, with numerous adverse implications for native flora and fauna. Established populations of two notorious freshwater invaders, the snail Tarebia granifera and the fish Pterygoplichthys disjunctivus, have been reported on three continents and are frequently predicted to be in di-rect competition with native species for dietary resources.
- Full Text:
- Authors: Hill, Jaclyn M , Jones, Roy W , Hill, Martin P , Weyl, Olaf L F
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/423711 , vital:72088 , xlink:href="https://doi.org/10.1111/fwb.12542"
- Description: Biological invasions threaten ecosystem integrity and bio-diversity, with numerous adverse implications for native flora and fauna. Established populations of two notorious freshwater invaders, the snail Tarebia granifera and the fish Pterygoplichthys disjunctivus, have been reported on three continents and are frequently predicted to be in di-rect competition with native species for dietary resources.
- Full Text:
Condoms in pockets and HIV-free certificates: mother-daughter communication about sex and risk in a time of AIDS epidemic in South Africa
- Authors: Wilbraham, Lindy
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/143693 , vital:38274 , https://ischp.files.wordpress.com/2015/08/ischp_2015_abstract_booklet.pdf
- Description: Responsive to the perceived high risks of sexual coercion, unwanted pregnancy and HIV-infection of girls in particular, several South African sexual health promotion campaigns have used media targeting parents (mothers in particular) to instruct them on how sex should be talked about with young people to ‘risk-proof’ them. Such an instrumentalist public health discourse posits this intergenerational communication as an ‘ongoing discussion’ of events, feelings, issues and risk-safe practices around heterosexual sex negotiation. A Foucauldian view finds these conversational imperatives pitched against much-talked-about resistances to talking about sex; and the saturation with risk of ambivalent mothers and silent daughters. Mother-daughter communication about sex and sexualities – as an uneasy western ideal of attachment parenting – has tangled roots in psychoanalytic theory and feminisms where sex as the core of modern subjectivity is normalized, capacities for intimacy are trained, and affiliative sexuality is modelled in ways that balance the rights and responsibilities of sexual agency/citizenship. This paper begins with two narrative fragments from a sexual health campaign that addressed mothers and daughters, and recounts how these ‘stories’ produced derisive laughter when introduced into group discussions with young/older women. The paper follows two lines of exploration. Firstly, is western idealized fabrication of inter-subjectivity between mothers and daughters desirable and feasible in post-apartheid conditions of epidemic in South Africa? And secondly, what if the narratives of lives and experiences we offer by way of health education materials provoke uncertainties, gaps and interrogations about sex, mothering and communication, instead of offering homilies and solutions?
- Full Text:
- Authors: Wilbraham, Lindy
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/143693 , vital:38274 , https://ischp.files.wordpress.com/2015/08/ischp_2015_abstract_booklet.pdf
- Description: Responsive to the perceived high risks of sexual coercion, unwanted pregnancy and HIV-infection of girls in particular, several South African sexual health promotion campaigns have used media targeting parents (mothers in particular) to instruct them on how sex should be talked about with young people to ‘risk-proof’ them. Such an instrumentalist public health discourse posits this intergenerational communication as an ‘ongoing discussion’ of events, feelings, issues and risk-safe practices around heterosexual sex negotiation. A Foucauldian view finds these conversational imperatives pitched against much-talked-about resistances to talking about sex; and the saturation with risk of ambivalent mothers and silent daughters. Mother-daughter communication about sex and sexualities – as an uneasy western ideal of attachment parenting – has tangled roots in psychoanalytic theory and feminisms where sex as the core of modern subjectivity is normalized, capacities for intimacy are trained, and affiliative sexuality is modelled in ways that balance the rights and responsibilities of sexual agency/citizenship. This paper begins with two narrative fragments from a sexual health campaign that addressed mothers and daughters, and recounts how these ‘stories’ produced derisive laughter when introduced into group discussions with young/older women. The paper follows two lines of exploration. Firstly, is western idealized fabrication of inter-subjectivity between mothers and daughters desirable and feasible in post-apartheid conditions of epidemic in South Africa? And secondly, what if the narratives of lives and experiences we offer by way of health education materials provoke uncertainties, gaps and interrogations about sex, mothering and communication, instead of offering homilies and solutions?
- Full Text:
Connectivity through allochthony: Reciprocal links between adjacent aquatic and terrestrial ecosystems in South Africa
- Richoux, Nicole B, Moyo, Sydney, Chari, Lenin D, Bergamino, Leandro, Carassou, Laure, Dalu, Tatenda, Hean, Jeff W, Sikutshwa, Likho, Gininda, Simphiwe, Magoro, Mandla, Perhar, Gurbir, Ni, Felicity, Villet, Martin H, Whitfield, Alan K, Parker, Daniel M, Froneman, P William, Arhonditsis, George, Craig, Adrian J F K
- Authors: Richoux, Nicole B , Moyo, Sydney , Chari, Lenin D , Bergamino, Leandro , Carassou, Laure , Dalu, Tatenda , Hean, Jeff W , Sikutshwa, Likho , Gininda, Simphiwe , Magoro, Mandla , Perhar, Gurbir , Ni, Felicity , Villet, Martin H , Whitfield, Alan K , Parker, Daniel M , Froneman, P William , Arhonditsis, George , Craig, Adrian J F K
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , report
- Identifier: http://hdl.handle.net/10962/438363 , vital:73454 , ISBN 978-1-4312-0679-7 , https://wrcwebsite.azurewebsites.net/wp-content/uploads/mdocs/2186-1-15.pdf
- Description: An important aspect of the dynamics of nutrients and pollutants in natural systems is captured in the concept of allochthony, founded on the observation that nutrients and energy in a variety of forms are transferred between adjacent habitats, com-munities and ecosystems that are not routinely considered as connected. Different forms of nutrients and energy move across the conceptual boundaries of habitats via organisms’ activities or physical processes such as wind or water currents, and these transfers can represent important food subsidies. Such cross-partition ecolog-ical subsidies can augment the nutritional condition, biomass and biodiversity of communities, particularly where local production (or autochthony) alone may be inadequate to support local food webs. Furthermore, organic subsidies can influ-ence population dynamics, community interactions and ecosystem processes, and can represent dominant flux inputs in ecosystem budgets. Our intention was to ex-plore organic nutrient fluxes in relation to a primarily lotic (i.e. flowing) aquatic sys-tem at the scale of a hydrological catchment.
- Full Text:
- Authors: Richoux, Nicole B , Moyo, Sydney , Chari, Lenin D , Bergamino, Leandro , Carassou, Laure , Dalu, Tatenda , Hean, Jeff W , Sikutshwa, Likho , Gininda, Simphiwe , Magoro, Mandla , Perhar, Gurbir , Ni, Felicity , Villet, Martin H , Whitfield, Alan K , Parker, Daniel M , Froneman, P William , Arhonditsis, George , Craig, Adrian J F K
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , report
- Identifier: http://hdl.handle.net/10962/438363 , vital:73454 , ISBN 978-1-4312-0679-7 , https://wrcwebsite.azurewebsites.net/wp-content/uploads/mdocs/2186-1-15.pdf
- Description: An important aspect of the dynamics of nutrients and pollutants in natural systems is captured in the concept of allochthony, founded on the observation that nutrients and energy in a variety of forms are transferred between adjacent habitats, com-munities and ecosystems that are not routinely considered as connected. Different forms of nutrients and energy move across the conceptual boundaries of habitats via organisms’ activities or physical processes such as wind or water currents, and these transfers can represent important food subsidies. Such cross-partition ecolog-ical subsidies can augment the nutritional condition, biomass and biodiversity of communities, particularly where local production (or autochthony) alone may be inadequate to support local food webs. Furthermore, organic subsidies can influ-ence population dynamics, community interactions and ecosystem processes, and can represent dominant flux inputs in ecosystem budgets. Our intention was to ex-plore organic nutrient fluxes in relation to a primarily lotic (i.e. flowing) aquatic sys-tem at the scale of a hydrological catchment.
- Full Text:
Constructing sexualities: a critical overview of articles published in Feminism and Psychology
- Marx, Jacqueline, Donaldson, Natalie
- Authors: Marx, Jacqueline , Donaldson, Natalie
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/142040 , vital:38044 , DOI: 10.1177/0959353515572704
- Description: How have sexualities been dealt with in articles published in Feminism and Psychology since the inception of the journal in 1991? The idea for this overview arose from our experience of designing a critical sexualities course for graduate students in psychology. The articles featured in this overview form part of a Virtual Special Issue that can be located on the Feminism and Psychology website. Virtual Special Issues (VSI) are collections of previously published articles, which have been compiled by guest editors who are experts in the field. VSIs provide readers with an overview of feminist thought about a topic or theme, as well as an easy way to locate pertinent articles. Scholars who are approaching a new topic may find a VSI especially useful, as will instructors who are preparing course syllabi. This article introduces the Constructing Sexualities VSI.
- Full Text:
- Authors: Marx, Jacqueline , Donaldson, Natalie
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/142040 , vital:38044 , DOI: 10.1177/0959353515572704
- Description: How have sexualities been dealt with in articles published in Feminism and Psychology since the inception of the journal in 1991? The idea for this overview arose from our experience of designing a critical sexualities course for graduate students in psychology. The articles featured in this overview form part of a Virtual Special Issue that can be located on the Feminism and Psychology website. Virtual Special Issues (VSI) are collections of previously published articles, which have been compiled by guest editors who are experts in the field. VSIs provide readers with an overview of feminist thought about a topic or theme, as well as an easy way to locate pertinent articles. Scholars who are approaching a new topic may find a VSI especially useful, as will instructors who are preparing course syllabi. This article introduces the Constructing Sexualities VSI.
- Full Text:
Contrasting signals of genetic diversity and historical demography between two recently diverged marine and estuarine fish species
- von Der Heyden, Sophie, Toms, Jessica A, Teske, Peter R, Lamberth, Stephen J, Holleman, Wouter
- Authors: von Der Heyden, Sophie , Toms, Jessica A , Teske, Peter R , Lamberth, Stephen J , Holleman, Wouter
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/445611 , vital:74407 , https://doi.org/10.3354/meps11191
- Description: Estuaries, at the confluence of marine and freshwater systems, are mostly of geologically recent origin and as such make excellent models for understanding recent speciation events. Using molecular approaches, we compared genetic diversity and demographic histories in 2 closely related southern African klipfish species, the marine Clinus superciliosus and the estuarine C. spatulatus. Strong genetic differentiation was identified using both mtDNA control region and nDNA S7 sequencing, despite some haplotype sharing. Coalescent-based modelling suggests that species divergence occurred during the Late Pleistocene or, more likely, during the Early Holocene, when present-day estuaries formed. Analyses of population demography suggest that C. superciliosus has undergone historical population expansion, whereas C. spatulatus is characterized by a population decline, potentially driven by repeated cycles of population crashes linked to the opening and closing of estuarine systems. This is also reflected in values of genetic diversity, which are almost an order of magnitude lower in the estuarine than in the marine species. Given the unique evolutionary history of C. spatulatus, a species that is restricted to only 2 South African estuaries, we highlight the need for a better understanding of the processes that have shaped the evolution of estuarine populations. The identification of unique genetic lineages in estuaries can help to better guide conservation and management efforts for some of South Africa’s most fragile habitats.
- Full Text: false
- Authors: von Der Heyden, Sophie , Toms, Jessica A , Teske, Peter R , Lamberth, Stephen J , Holleman, Wouter
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/445611 , vital:74407 , https://doi.org/10.3354/meps11191
- Description: Estuaries, at the confluence of marine and freshwater systems, are mostly of geologically recent origin and as such make excellent models for understanding recent speciation events. Using molecular approaches, we compared genetic diversity and demographic histories in 2 closely related southern African klipfish species, the marine Clinus superciliosus and the estuarine C. spatulatus. Strong genetic differentiation was identified using both mtDNA control region and nDNA S7 sequencing, despite some haplotype sharing. Coalescent-based modelling suggests that species divergence occurred during the Late Pleistocene or, more likely, during the Early Holocene, when present-day estuaries formed. Analyses of population demography suggest that C. superciliosus has undergone historical population expansion, whereas C. spatulatus is characterized by a population decline, potentially driven by repeated cycles of population crashes linked to the opening and closing of estuarine systems. This is also reflected in values of genetic diversity, which are almost an order of magnitude lower in the estuarine than in the marine species. Given the unique evolutionary history of C. spatulatus, a species that is restricted to only 2 South African estuaries, we highlight the need for a better understanding of the processes that have shaped the evolution of estuarine populations. The identification of unique genetic lineages in estuaries can help to better guide conservation and management efforts for some of South Africa’s most fragile habitats.
- Full Text: false
Contributions to the study of a class of optimal control problems on the orthogonal groups SO(3) and SO(4)
- Authors: Adams, Ross Montague
- Date: 2015
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/64826 , vital:28608
- Description: In this thesis we investigate a class of invariant optimal control problems, and their associated quadratic Hamilton-Poisson systems, on the orthogonal groups SO(3) and SO(4). Specifically, we are concerned with the class of left-invariant control affine systems. We begin by classifying all cost-extended systems on SO(3) under cost equivalence. (Cost-extended systems are closely related to optimal control problems.) A classification of all quadratic Hamilton-Poisson systems on the (minus) Lie-Poisson space so(3)*, under affine equivalence, is also obtained. For the normal forms obtained in our classification (of Hamilton-Poisson systems) we investigate the (Lyapunov) stability nature of the equilibria using spectral and energy-Casimir methods. For a subclass of these systems, we obtain analytic expressions for the integral curves of the associated Hamiltonian vector fields in terms of (basic) Jacobi elliptic functions. The explicit relationship between the classification of cost-extended systems on SO(3) and the classification of quadratic Hamilton- Poisson systems on so(3)* is provided. On SO(4), a classification of all left-invariant control affine systems under L-equivalence is obtained. We then determine which of these representatives are controllable, thus obtaining a classification under detached feedback equivalence. We also obtain a partial classification of quadratic Hamilton-Poisson systems on the Lie-Poisson space so(4)*. An investigation of the stability nature of the equilibria for a subclass of these systems is also done. Several illustrative examples of optimal control problems on the orthogonal group SO(3) are provided. More specifically, we consider an optimal control problem corresponding to a representative of our classification (of cost-extended system) for each possible number of control inputs. For each of these problems, we obtain explicit expressions for the extremal trajectories on the homogeneous space S2 by projecting the extremal trajectories on the group SO(3). The examples provided show how our classifications of cost-extended systems and Hamilton-Poisson systems can be used to obtain the optimal controls and the extremal trajectories corresponding to a large class of optimal control problems on SO(3). An example of a four-input optimal control problem on SO(4) is also provided. This example is provided to show how the solutions of certain problems on SO(4) can be related to the solutions of certain optimal control problems on SO(3).
- Full Text:
- Authors: Adams, Ross Montague
- Date: 2015
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/64826 , vital:28608
- Description: In this thesis we investigate a class of invariant optimal control problems, and their associated quadratic Hamilton-Poisson systems, on the orthogonal groups SO(3) and SO(4). Specifically, we are concerned with the class of left-invariant control affine systems. We begin by classifying all cost-extended systems on SO(3) under cost equivalence. (Cost-extended systems are closely related to optimal control problems.) A classification of all quadratic Hamilton-Poisson systems on the (minus) Lie-Poisson space so(3)*, under affine equivalence, is also obtained. For the normal forms obtained in our classification (of Hamilton-Poisson systems) we investigate the (Lyapunov) stability nature of the equilibria using spectral and energy-Casimir methods. For a subclass of these systems, we obtain analytic expressions for the integral curves of the associated Hamiltonian vector fields in terms of (basic) Jacobi elliptic functions. The explicit relationship between the classification of cost-extended systems on SO(3) and the classification of quadratic Hamilton- Poisson systems on so(3)* is provided. On SO(4), a classification of all left-invariant control affine systems under L-equivalence is obtained. We then determine which of these representatives are controllable, thus obtaining a classification under detached feedback equivalence. We also obtain a partial classification of quadratic Hamilton-Poisson systems on the Lie-Poisson space so(4)*. An investigation of the stability nature of the equilibria for a subclass of these systems is also done. Several illustrative examples of optimal control problems on the orthogonal group SO(3) are provided. More specifically, we consider an optimal control problem corresponding to a representative of our classification (of cost-extended system) for each possible number of control inputs. For each of these problems, we obtain explicit expressions for the extremal trajectories on the homogeneous space S2 by projecting the extremal trajectories on the group SO(3). The examples provided show how our classifications of cost-extended systems and Hamilton-Poisson systems can be used to obtain the optimal controls and the extremal trajectories corresponding to a large class of optimal control problems on SO(3). An example of a four-input optimal control problem on SO(4) is also provided. This example is provided to show how the solutions of certain problems on SO(4) can be related to the solutions of certain optimal control problems on SO(3).
- Full Text:
Counsellors’ constructions of intimate partner violence (IPV) during pregnancy and their interventions with women suffering such IPV:
- Fleischack, Anne, Macleod, Catriona I, Böhmke, Werner
- Authors: Fleischack, Anne , Macleod, Catriona I , Böhmke, Werner
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/143716 , vital:38276 , https://ischp.files.wordpress.com/2015/08/ischp_2015_abstract_booklet.pdf
- Description: South African research reveals a high prevalence of intimate partner violence (IPV) yet little research exists regarding IPV during pregnancy. In this paper we present data collected through narrative interviews with eight counsellors from two NGOs working with women experiencing IPV during pregnancy. Using a narrative-discursive analytical lens, attention was given to the construction of subject positions and power relations between the men and women in the counsellors’ narratives. Men were largely positioned as subscribing to violent patriarchal behaviour whilst women were mostly positioned as nurturing, and as victims. The counsellors saw IPV during pregnancy as occurring for a variety of reasons, including conflicts around abortion, and male partners finding the women physically unattractive. It was noted that IPV during pregnancy is managed by women in complex ways. Counsellors’ emphasis on individual counselling and leaving the IPV relationship suggests that women are ultimately responsible for their own wellbeing and success.
- Full Text:
- Authors: Fleischack, Anne , Macleod, Catriona I , Böhmke, Werner
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/143716 , vital:38276 , https://ischp.files.wordpress.com/2015/08/ischp_2015_abstract_booklet.pdf
- Description: South African research reveals a high prevalence of intimate partner violence (IPV) yet little research exists regarding IPV during pregnancy. In this paper we present data collected through narrative interviews with eight counsellors from two NGOs working with women experiencing IPV during pregnancy. Using a narrative-discursive analytical lens, attention was given to the construction of subject positions and power relations between the men and women in the counsellors’ narratives. Men were largely positioned as subscribing to violent patriarchal behaviour whilst women were mostly positioned as nurturing, and as victims. The counsellors saw IPV during pregnancy as occurring for a variety of reasons, including conflicts around abortion, and male partners finding the women physically unattractive. It was noted that IPV during pregnancy is managed by women in complex ways. Counsellors’ emphasis on individual counselling and leaving the IPV relationship suggests that women are ultimately responsible for their own wellbeing and success.
- Full Text:
Critical realism, environmental learning and social-ecological change
- Price, Leigh, Lotz-Sisitka, Heila
- Authors: Price, Leigh , Lotz-Sisitka, Heila
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/436952 , vital:73319 , ISBN 9781315660899 , https://www.routledge.com/Critical-Realism-Environmental-Learning-and-Social-Ecological-Change/Price-Lotz-Sistka/p/book/9780367597689
- Description: The contemporary social-ecological condition is characterized by power-ful changes in the way that we relate to each other and to the environ-ment. This has led to increased ecological vulnerability, which is also ac-companied by ongoing, and increased societal vulnerability. Nevertheless there remain opportunities for developing new social-ecological rela-tions, and for social-ecological learning and change. This would seem to require a strong project of recovering ontology, and a challenging and broadening of dominant ways of knowing (Mignolo, 2000) that also tend to commit what Bhaskar describes as the ‘epistemic fallacy’, or the ‘the analysis or reduction of being to knowledge of being’ (Bhaskar, 2010, p. 1). In response, Bhaskar (ibid.) suggests critical realism as an alternative that embodies a ‘compatibility of ontological realism, epistemological relativism and judgmental rationality’. This includes a ‘re-vindication of ontology’ and the possibility of recognizing and accounting for structure, difference and change in the world in ways that escape ontological actu-alism and ontological monovalence or ‘the generation of a purely positive account of reality’ (ibid., p. 15).
- Full Text:
- Authors: Price, Leigh , Lotz-Sisitka, Heila
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/436952 , vital:73319 , ISBN 9781315660899 , https://www.routledge.com/Critical-Realism-Environmental-Learning-and-Social-Ecological-Change/Price-Lotz-Sistka/p/book/9780367597689
- Description: The contemporary social-ecological condition is characterized by power-ful changes in the way that we relate to each other and to the environ-ment. This has led to increased ecological vulnerability, which is also ac-companied by ongoing, and increased societal vulnerability. Nevertheless there remain opportunities for developing new social-ecological rela-tions, and for social-ecological learning and change. This would seem to require a strong project of recovering ontology, and a challenging and broadening of dominant ways of knowing (Mignolo, 2000) that also tend to commit what Bhaskar describes as the ‘epistemic fallacy’, or the ‘the analysis or reduction of being to knowledge of being’ (Bhaskar, 2010, p. 1). In response, Bhaskar (ibid.) suggests critical realism as an alternative that embodies a ‘compatibility of ontological realism, epistemological relativism and judgmental rationality’. This includes a ‘re-vindication of ontology’ and the possibility of recognizing and accounting for structure, difference and change in the world in ways that escape ontological actu-alism and ontological monovalence or ‘the generation of a purely positive account of reality’ (ibid., p. 15).
- Full Text:
Cultural values of natural resources among the San people neighbouring Kgalagadi Transfrontier Park, South Africa
- Thondhlana, Gladman, Shackleton, Sheona E
- Authors: Thondhlana, Gladman , Shackleton, Sheona E
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/67699 , vital:29131 , https://doi.org/10.1080/13549839.2013.818950
- Description: Publisher version , Globally, cultural values of natural resources are increasingly recognised as important for local natural resource management and conservation in and beyond parks. The tendency has been to focus on the direct-use rather than the cultural values and importance of natural resources. The cultural values underlying natural resources (directly or indirectly used) and various natural resource-based activities, and the implications for conservation, remain little explored. Drawing from household surveys, in-depth qualitative interviews, observations and secondary data, we explore the cultural significance of natural resources and different land-use practices among the San people bordering Kgalagadi Transfrontier Park in South Africa. Our findings illustrate that though cultural values are inextricably linked to resource use, they are not recognised by all community members. Further, cultural values arise from a diverse and sometimes conflicting array of values that punctuate individuals' lifestyles. A better understanding of context-specific cultural settings and the linkages between the cultural and material dimensions of resource use can lead to the development of interventions that can ensure effective conservation of both natural resources and culture.
- Full Text: false
- Authors: Thondhlana, Gladman , Shackleton, Sheona E
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/67699 , vital:29131 , https://doi.org/10.1080/13549839.2013.818950
- Description: Publisher version , Globally, cultural values of natural resources are increasingly recognised as important for local natural resource management and conservation in and beyond parks. The tendency has been to focus on the direct-use rather than the cultural values and importance of natural resources. The cultural values underlying natural resources (directly or indirectly used) and various natural resource-based activities, and the implications for conservation, remain little explored. Drawing from household surveys, in-depth qualitative interviews, observations and secondary data, we explore the cultural significance of natural resources and different land-use practices among the San people bordering Kgalagadi Transfrontier Park in South Africa. Our findings illustrate that though cultural values are inextricably linked to resource use, they are not recognised by all community members. Further, cultural values arise from a diverse and sometimes conflicting array of values that punctuate individuals' lifestyles. A better understanding of context-specific cultural settings and the linkages between the cultural and material dimensions of resource use can lead to the development of interventions that can ensure effective conservation of both natural resources and culture.
- Full Text: false
Current developments in arbuscular mycorrhizal fungi research and its role in salinity stress alleviation a biotechnological perspective
- Kumar, Ashwani, Dames, Joanna F, Gupta, Aditi, Sharma, Satyawati, Gilbert, Jack A, Ahmad, Parvaiz
- Authors: Kumar, Ashwani , Dames, Joanna F , Gupta, Aditi , Sharma, Satyawati , Gilbert, Jack A , Ahmad, Parvaiz
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/443998 , vital:74177 , https://doi.org/10.3109/07388551.2014.899964
- Description: Arbuscular mycorrhizal fungi (AMF) form widespread symbiotic associations with 80% of known land plants. They play a major role in plant nutrition, growth, water absorption, nutrient cycling and protection from pathogens, and as a result, contribute to ecosystem processes. Salinity stress conditions undoubtedly limit plant productivity and, therefore, the role of AMF as a biological tool for improving plant salt stress tolerance, is gaining economic importance worldwide. However, this approach requires a better understanding of how plants and AMF intimately interact with each other in saline environments and how this interaction leads to physiological changes in plants. This knowledge is important to develop sustainable strategies for successful utilization of AMF to improve plant health under a variety of stress conditions. Recent advances in the field of molecular biology, “omics” technology and advanced microscopy can provide new insight about these mechanisms of interaction between AMF and plants, as well as other microbes. This review mainly discusses the effect of salinity on AMF and plants, and role of AMF in alleviation of salinity stress including insight on methods for AMF identification. The focus remains on latest advancements in mycorrhizal research that can potentially offer an integrative understanding of the role of AMF in salinity tolerance and sustainable crop production.
- Full Text:
- Authors: Kumar, Ashwani , Dames, Joanna F , Gupta, Aditi , Sharma, Satyawati , Gilbert, Jack A , Ahmad, Parvaiz
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/443998 , vital:74177 , https://doi.org/10.3109/07388551.2014.899964
- Description: Arbuscular mycorrhizal fungi (AMF) form widespread symbiotic associations with 80% of known land plants. They play a major role in plant nutrition, growth, water absorption, nutrient cycling and protection from pathogens, and as a result, contribute to ecosystem processes. Salinity stress conditions undoubtedly limit plant productivity and, therefore, the role of AMF as a biological tool for improving plant salt stress tolerance, is gaining economic importance worldwide. However, this approach requires a better understanding of how plants and AMF intimately interact with each other in saline environments and how this interaction leads to physiological changes in plants. This knowledge is important to develop sustainable strategies for successful utilization of AMF to improve plant health under a variety of stress conditions. Recent advances in the field of molecular biology, “omics” technology and advanced microscopy can provide new insight about these mechanisms of interaction between AMF and plants, as well as other microbes. This review mainly discusses the effect of salinity on AMF and plants, and role of AMF in alleviation of salinity stress including insight on methods for AMF identification. The focus remains on latest advancements in mycorrhizal research that can potentially offer an integrative understanding of the role of AMF in salinity tolerance and sustainable crop production.
- Full Text:
Cyber Vulnerability Assessment: Case Study of Malawi and Tanzania
- Chindipha, Stones D, Irwin, Barry V W
- Authors: Chindipha, Stones D , Irwin, Barry V W
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/428558 , vital:72520 , https://accconference.mandela.ac.za/ACCConference/media/Store/images/Proceedings-2015.pdf#page=105
- Description: Much as the Internet is beneficial to our daily activities, with each passing day it also brings along with it information security concerns for the users be they at company or national level. Each year the number of Internet users keeps growing, particularly in Africa, and this means only one thing, more cyber-attacks. Governments have become a focal point of this data leakage problem making this a matter of national security. Looking at the current state of affairs, cyber-based incidents are more likely to increase in Africa, mainly due to the increased prevalence and affordability of broadband connectivity which is coupled with lack of online security awareness. A drop in the cost of broadband connection means more people will be able to afford Internet connectivity. With open Source Intelligence (OSINT), this paper aims to perform a vulnerability analysis for states in Eastern Africa building from prior research by Swart et al. which showed that there are vulnerabilities in the information systems, using the case of South Africa as an example. States in East Africa are to be considered as candidates, with the final decision being determined by access to suitable resources, and availability of information. A comparative analysis to assess the factors that affect the degree of security susceptibilities in various states will also be made and information security measures used by various governments to ascertain the extent of their contribution to this vulnerability will be assessed. This pilot study will be extended to other Southern and Eastern African states like Botswana, Kenya, Uganda and Namibia in future work.
- Full Text:
- Authors: Chindipha, Stones D , Irwin, Barry V W
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/428558 , vital:72520 , https://accconference.mandela.ac.za/ACCConference/media/Store/images/Proceedings-2015.pdf#page=105
- Description: Much as the Internet is beneficial to our daily activities, with each passing day it also brings along with it information security concerns for the users be they at company or national level. Each year the number of Internet users keeps growing, particularly in Africa, and this means only one thing, more cyber-attacks. Governments have become a focal point of this data leakage problem making this a matter of national security. Looking at the current state of affairs, cyber-based incidents are more likely to increase in Africa, mainly due to the increased prevalence and affordability of broadband connectivity which is coupled with lack of online security awareness. A drop in the cost of broadband connection means more people will be able to afford Internet connectivity. With open Source Intelligence (OSINT), this paper aims to perform a vulnerability analysis for states in Eastern Africa building from prior research by Swart et al. which showed that there are vulnerabilities in the information systems, using the case of South Africa as an example. States in East Africa are to be considered as candidates, with the final decision being determined by access to suitable resources, and availability of information. A comparative analysis to assess the factors that affect the degree of security susceptibilities in various states will also be made and information security measures used by various governments to ascertain the extent of their contribution to this vulnerability will be assessed. This pilot study will be extended to other Southern and Eastern African states like Botswana, Kenya, Uganda and Namibia in future work.
- Full Text:
Data Centre vulnerabilities physical, logical and trusted entity security
- Swart, Ignus, Grobler, Marthie, Irwin, Barry V W
- Authors: Swart, Ignus , Grobler, Marthie , Irwin, Barry V W
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/427859 , vital:72467 , https://www.researchgate.net/profile/Ignus-Swart/publication/305442546_Data_Centre_vulnerabilities_physical_logical_trusted_entity_security/links/578f38c108aecbca4cada6bf/Data-Centre-vulnerabilities-physical-logical-trusted-entity-security.pdf
- Description: Data centres are often the hub for a significant number of disparate interconnecting systems. With rapid advances in virtualization, the use of data centres have increased significantly and are set to continue growing. Systems hosted typically serve the data needs for a growing number of organizations ranging from private individuals to mammoth governmental departments. Due to this centralized method of operation, data centres have become a prime target for attackers. These attackers are not only after the data contained in the data centre but often the physical infrastructure the systems run on is the target of attack. Down time resulting from such an attack can affect a wide range of entities and can have severe financial implications for the owners of the data centre. To limit liability strict adherence to standards are prescribed. Technology however develops at a far faster pace than standards and our ability to accurately measure information security has significant hidden caveats. This allows for a situation where the defenders dilemma is exacerbated by information overload, a significant increase in attack surface and reporting tools that show only limited views. This paper investigates the logical and physical security components of a data centre and introduces the notion of third party involvement as an increase in attack surface due to the manner in which data centres typically operate.
- Full Text:
- Authors: Swart, Ignus , Grobler, Marthie , Irwin, Barry V W
- Date: 2015
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/427859 , vital:72467 , https://www.researchgate.net/profile/Ignus-Swart/publication/305442546_Data_Centre_vulnerabilities_physical_logical_trusted_entity_security/links/578f38c108aecbca4cada6bf/Data-Centre-vulnerabilities-physical-logical-trusted-entity-security.pdf
- Description: Data centres are often the hub for a significant number of disparate interconnecting systems. With rapid advances in virtualization, the use of data centres have increased significantly and are set to continue growing. Systems hosted typically serve the data needs for a growing number of organizations ranging from private individuals to mammoth governmental departments. Due to this centralized method of operation, data centres have become a prime target for attackers. These attackers are not only after the data contained in the data centre but often the physical infrastructure the systems run on is the target of attack. Down time resulting from such an attack can affect a wide range of entities and can have severe financial implications for the owners of the data centre. To limit liability strict adherence to standards are prescribed. Technology however develops at a far faster pace than standards and our ability to accurately measure information security has significant hidden caveats. This allows for a situation where the defenders dilemma is exacerbated by information overload, a significant increase in attack surface and reporting tools that show only limited views. This paper investigates the logical and physical security components of a data centre and introduces the notion of third party involvement as an increase in attack surface due to the manner in which data centres typically operate.
- Full Text:
DDoS Attack Mitigation Through Control of Inherent Charge Decay of Memory Implementations
- Herbert, Alan, Irwin, Barry V W, van Heerden, Renier P
- Authors: Herbert, Alan , Irwin, Barry V W , van Heerden, Renier P
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/430339 , vital:72684 , https://www.academic-bookshop.com/ourshop/prod_3774091-ICCWS-2015-10th-International-Conference-on-Cyber-Warfare-and-Security-Kruger-National-Park-South-Africa-PRINT-ver-ISBN-978191030996.html
- Description: DDoS (Distributed Denial of Service) attacks over recent years have shown to be devastating on the target systems and services made publicly available over the Internet. Furthermore, the backscatter1 caused by DDoS attacks also affects the available bandwidth and responsiveness of many other hosts within the Internet. The unfortunate reality of these attacks is that the targeted party cannot fight back due to the presence of botnets and malware-driven hosts. These hosts that carry out the attack on a target are usually controlled remotely and the owner of the device is unaware of it; for this reason one cannot attack back directly as this will serve little more than to disable an innocent party. A proposed solution to these DDoS attacks is to identify a potential attacking address and ignore communication from that address for a set period of time through time stamping.
- Full Text:
- Authors: Herbert, Alan , Irwin, Barry V W , van Heerden, Renier P
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/430339 , vital:72684 , https://www.academic-bookshop.com/ourshop/prod_3774091-ICCWS-2015-10th-International-Conference-on-Cyber-Warfare-and-Security-Kruger-National-Park-South-Africa-PRINT-ver-ISBN-978191030996.html
- Description: DDoS (Distributed Denial of Service) attacks over recent years have shown to be devastating on the target systems and services made publicly available over the Internet. Furthermore, the backscatter1 caused by DDoS attacks also affects the available bandwidth and responsiveness of many other hosts within the Internet. The unfortunate reality of these attacks is that the targeted party cannot fight back due to the presence of botnets and malware-driven hosts. These hosts that carry out the attack on a target are usually controlled remotely and the owner of the device is unaware of it; for this reason one cannot attack back directly as this will serve little more than to disable an innocent party. A proposed solution to these DDoS attacks is to identify a potential attacking address and ignore communication from that address for a set period of time through time stamping.
- Full Text:
Deep genetic divergence between geographically isolated populations of the goldie barb (Barbus pallidus) in South Africa: potential taxonomic and conservation implications
- Chakona, Albert, Malherbe, Willem S, Gouws, Gavin, Swartz, Ernst R
- Authors: Chakona, Albert , Malherbe, Willem S , Gouws, Gavin , Swartz, Ernst R
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/443284 , vital:74105 , https://hdl.handle.net/10520/EJC177698
- Description: Barbus pallidus as it is presently defined has a disjunct distribution that is divided between northern and southern populations in South Africa. Sequence data from the cytochrome b gene region showed two distinct lineages that correspond to these geographically distant areas. Divergence between these two lineages was relatively high (5.5-6.5%) and comparable to typical interspecific divergences found between closely related southern African cyprinid fishes. Based on this deep genetic divergence, we conclude that the northern lineage may represent a previously unrecognised species or may belong to a different, but known species or species complex not associated with 'true' B. pallidus. These findings add to a growing body of evidence that freshwater fish diversity in southern Africa requires major revision.
- Full Text:
- Authors: Chakona, Albert , Malherbe, Willem S , Gouws, Gavin , Swartz, Ernst R
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/443284 , vital:74105 , https://hdl.handle.net/10520/EJC177698
- Description: Barbus pallidus as it is presently defined has a disjunct distribution that is divided between northern and southern populations in South Africa. Sequence data from the cytochrome b gene region showed two distinct lineages that correspond to these geographically distant areas. Divergence between these two lineages was relatively high (5.5-6.5%) and comparable to typical interspecific divergences found between closely related southern African cyprinid fishes. Based on this deep genetic divergence, we conclude that the northern lineage may represent a previously unrecognised species or may belong to a different, but known species or species complex not associated with 'true' B. pallidus. These findings add to a growing body of evidence that freshwater fish diversity in southern Africa requires major revision.
- Full Text:
Density and regrowth of a forest restio (Ischyrolepis eleocharis) under harvest and non-harvest treatments in dune forests of Eastern Cape Province, South Africa
- Ruwanza, Sheunesu, Shackleton, Charlie M
- Authors: Ruwanza, Sheunesu , Shackleton, Charlie M
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/180828 , vital:43649 , xlink:href="https://doi.org/10.1007/s12231-015-9306-y"
- Description: Ischyrolepis eleocharis (Mast.) H.P.Linder is a perennial rush or sedge-like herb in the Restionaceae family and has been harvested for various uses from coastal forest dunes of South Africa. Around 2005, a ban on I. eleocharis harvesting in Bathurst coastal forest was instituted by provincial conservation authorities based on their unsubstantiated impression that the species population was decreasing. Here we report on the population density pre and post the harvest ban, as well as further explore the autecology of the species by assessing plant density relative to environmental factors (slope and aspect) and a controlled experiment on regrowth after harvesting at different intensities. The results show that the shoot density of both living and dead I. eleocharis increased significantly over the past eight years. This concurs with results from the harvesting experiment which showed that I. eleocharis recovered rapidly within a year of harvesting. Both aspect and slope play a key role in the distribution of I. eleocharis, with most plants found in open patches in the forest located on the summit and upper slopes of dunes facing the landward side. These results indicate that I. eleocharis is highly abundant and resilient to harvesting.
- Full Text:
- Authors: Ruwanza, Sheunesu , Shackleton, Charlie M
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/180828 , vital:43649 , xlink:href="https://doi.org/10.1007/s12231-015-9306-y"
- Description: Ischyrolepis eleocharis (Mast.) H.P.Linder is a perennial rush or sedge-like herb in the Restionaceae family and has been harvested for various uses from coastal forest dunes of South Africa. Around 2005, a ban on I. eleocharis harvesting in Bathurst coastal forest was instituted by provincial conservation authorities based on their unsubstantiated impression that the species population was decreasing. Here we report on the population density pre and post the harvest ban, as well as further explore the autecology of the species by assessing plant density relative to environmental factors (slope and aspect) and a controlled experiment on regrowth after harvesting at different intensities. The results show that the shoot density of both living and dead I. eleocharis increased significantly over the past eight years. This concurs with results from the harvesting experiment which showed that I. eleocharis recovered rapidly within a year of harvesting. Both aspect and slope play a key role in the distribution of I. eleocharis, with most plants found in open patches in the forest located on the summit and upper slopes of dunes facing the landward side. These results indicate that I. eleocharis is highly abundant and resilient to harvesting.
- Full Text: