Distribution of benthic diatom communities in a permanently open temperate estuary in relation to physico-chemical variables
- Dalu, Tatenda, Richoux, Nicole B, Froneman, P William
- Authors: Dalu, Tatenda , Richoux, Nicole B , Froneman, P William
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/67943 , vital:29172 , https://doi.org/10.1016/j.sajb.2015.06.004
- Description: Publisher version , The spatial and temporal patterns in benthic diatom community structure in temperate permanently open estuaries are poorly understood. In this study, we used a combination of multivariate and diversity indices to elucidate environmental factors associated with diatom community structure in the Kowie Estuary, South Africa. Benthic diatom samples were collected from three sites corresponding to the upper, middle and lower reaches of the estuary on four occasions over the period early spring 2012 to winter 2013. Among the 89 benthic diatoms observed, Entomoneis paludosa (W Smith) Reimer, Nitzschia reversa W Smith, Nitzschia closterium (Ehrenberg) W Smith, Pleurosigma elongatum W Smith, P. salinarum (Grunow) Grunow, Staurosira elliptica (Schumann) DM Williams & Round, Surirella brebissonii Krammer & Lange-Bertalot, and Surirella ovalis Brébisson were the numerically dominant species. Principal component analysis demonstrated that the diatom community structure was determined by a variety of factors including nutrient (ammonia, nitrate) concentrations, hydrology (e.g., water depth and flow) and pH. Hierarchical cluster analysis revealed the absence of any distinct spatial patterns, although distinct benthic diatom communities were recorded during the different sampling periods. The species richness was highest in the middle reach, decreasing from early spring to summer in all reaches. The results of the study provide important insights into the various factors that structure benthic diatom community composition within a permanently open temperate southern African estuary.
- Full Text: false
- Authors: Dalu, Tatenda , Richoux, Nicole B , Froneman, P William
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/67943 , vital:29172 , https://doi.org/10.1016/j.sajb.2015.06.004
- Description: Publisher version , The spatial and temporal patterns in benthic diatom community structure in temperate permanently open estuaries are poorly understood. In this study, we used a combination of multivariate and diversity indices to elucidate environmental factors associated with diatom community structure in the Kowie Estuary, South Africa. Benthic diatom samples were collected from three sites corresponding to the upper, middle and lower reaches of the estuary on four occasions over the period early spring 2012 to winter 2013. Among the 89 benthic diatoms observed, Entomoneis paludosa (W Smith) Reimer, Nitzschia reversa W Smith, Nitzschia closterium (Ehrenberg) W Smith, Pleurosigma elongatum W Smith, P. salinarum (Grunow) Grunow, Staurosira elliptica (Schumann) DM Williams & Round, Surirella brebissonii Krammer & Lange-Bertalot, and Surirella ovalis Brébisson were the numerically dominant species. Principal component analysis demonstrated that the diatom community structure was determined by a variety of factors including nutrient (ammonia, nitrate) concentrations, hydrology (e.g., water depth and flow) and pH. Hierarchical cluster analysis revealed the absence of any distinct spatial patterns, although distinct benthic diatom communities were recorded during the different sampling periods. The species richness was highest in the middle reach, decreasing from early spring to summer in all reaches. The results of the study provide important insights into the various factors that structure benthic diatom community composition within a permanently open temperate southern African estuary.
- Full Text: false
Diversity of bacteria isolated from the flies Musca domestica (Muscidae) andChrysomya megacephala (Calliphoridae) with emphasis on vectored pathogens
- Brits, Devon, Brooks, Margot, Villet, Martin H
- Authors: Brits, Devon , Brooks, Margot , Villet, Martin H
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66904 , vital:28998 , ISSN 1021-3589 , https://doi.org/10.4001/003.024.0365
- Description: Publisher version , We evaluated the bacteria occurring externally on Musca domestica and Chrysomya megacephala, the two most common synanthropic flies which may be found at many refuse sites throughout the world. Bacteria cultured from 10 specimens of each species were isolated, Gram-stained and examined microscopically, and divided into morphologically distinct ‘pseudospecies', to avoid excessive duplication of genetic identification. About 350 bp of the 16S ribosomalRNAgene was amplified from genomicDNAextracted from each ‘pseudospecies', sequenced, and bacteria identified using BLASTn. Nineteen different types of colony were identified from M. domestica, with Pseudomonas sp. and Swine Manure Bacterium SP14 being most abundant. Chrysomya megacephala yielded 15 distinct pseudospecies with total colony counts approximating to 10 000 from 10 plates, where 80 % of colonies were non-pathogenic Bacillus pumilus. A total of 18 species were identified genetically: three shared by the fly species; four unique to C. megacephala, and 13 unique to M. domestica. Half of these 18 species were pathogenic, two or three others were food spoilers and the rest were environmental or commensal bacteria from soil or plant matter. This study added three new pathogenic strains of bacteria and one new environmental strain to the list of bacteria reported to be vectored by these flies.
- Full Text: false
- Authors: Brits, Devon , Brooks, Margot , Villet, Martin H
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66904 , vital:28998 , ISSN 1021-3589 , https://doi.org/10.4001/003.024.0365
- Description: Publisher version , We evaluated the bacteria occurring externally on Musca domestica and Chrysomya megacephala, the two most common synanthropic flies which may be found at many refuse sites throughout the world. Bacteria cultured from 10 specimens of each species were isolated, Gram-stained and examined microscopically, and divided into morphologically distinct ‘pseudospecies', to avoid excessive duplication of genetic identification. About 350 bp of the 16S ribosomalRNAgene was amplified from genomicDNAextracted from each ‘pseudospecies', sequenced, and bacteria identified using BLASTn. Nineteen different types of colony were identified from M. domestica, with Pseudomonas sp. and Swine Manure Bacterium SP14 being most abundant. Chrysomya megacephala yielded 15 distinct pseudospecies with total colony counts approximating to 10 000 from 10 plates, where 80 % of colonies were non-pathogenic Bacillus pumilus. A total of 18 species were identified genetically: three shared by the fly species; four unique to C. megacephala, and 13 unique to M. domestica. Half of these 18 species were pathogenic, two or three others were food spoilers and the rest were environmental or commensal bacteria from soil or plant matter. This study added three new pathogenic strains of bacteria and one new environmental strain to the list of bacteria reported to be vectored by these flies.
- Full Text: false
Do indigenous street trees promote more biodiversity than alien ones? evidence using mistletoes and birds in South Africa
- Authors: Shackleton, Charlie M
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/64663 , vital:28587 , http://www.doi:10.3390/f7070134
- Description: Trees in urban landscapes provide a range of ecosystem services, including habitat, refugia,food, and corridors for other fauna and flora. However, there is some debate whether the richness and abundance of other biodiversity supported is influenced by the provenance of trees, i.e., native or non-native. This study assessed the presence of mistletoes and birds (and nests) in 1261 street trees. There were marked differences between native and non-native street trees, with the former having a significantly higher prevalence of birds (and nests) and supporting more species and in greater densities, whilst the latter supported a higher prevalence of mistletoes. Additionally, for birds, the proximity to green space, tree size and species were also important, whilst for mistletoes, the proximity to green space, slope aspect, and tree species were significant. Preference ratios indicated that some tree species had a higher than random occurrence of birds or mistletoes, whilst others had a low abundance. The indigenous tree species, Acacia karroo Hayne was the only reasonably abundant street tree species that was important for birds, nests, and mistletoes. At the street scale, there was a positive relationship between street tree species richness and bird species richness. These results emphasise the importance of selecting appropriate tree species if biodiversity conservation is a core outcome.
- Full Text:
- Authors: Shackleton, Charlie M
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/64663 , vital:28587 , http://www.doi:10.3390/f7070134
- Description: Trees in urban landscapes provide a range of ecosystem services, including habitat, refugia,food, and corridors for other fauna and flora. However, there is some debate whether the richness and abundance of other biodiversity supported is influenced by the provenance of trees, i.e., native or non-native. This study assessed the presence of mistletoes and birds (and nests) in 1261 street trees. There were marked differences between native and non-native street trees, with the former having a significantly higher prevalence of birds (and nests) and supporting more species and in greater densities, whilst the latter supported a higher prevalence of mistletoes. Additionally, for birds, the proximity to green space, tree size and species were also important, whilst for mistletoes, the proximity to green space, slope aspect, and tree species were significant. Preference ratios indicated that some tree species had a higher than random occurrence of birds or mistletoes, whilst others had a low abundance. The indigenous tree species, Acacia karroo Hayne was the only reasonably abundant street tree species that was important for birds, nests, and mistletoes. At the street scale, there was a positive relationship between street tree species richness and bird species richness. These results emphasise the importance of selecting appropriate tree species if biodiversity conservation is a core outcome.
- Full Text:
Docking of HIV protease to silver nanoparticles
- Whiteley, Chris G, Shing, C-Y, Kuo, C-C, Lee, Duu-Jong
- Authors: Whiteley, Chris G , Shing, C-Y , Kuo, C-C , Lee, Duu-Jong
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/67105 , vital:29032 , https://doi.org/10.1016/j.jtice.2015.10.029
- Description: publisher version , This interaction of silver nanoparticles (AgNP) with human immune-deficiency virus aspartic protease (HIVPR) is examined by molecular dynamics simulation using the Colores (Situs) package and biophysical techniques using UV–vis spectroscopy, dynamic light scattering, transmission electron microscopy and circular dichroism. The ‘docking’ of AgNP with HIVPR creates a complex [AgNP–HIVPR] to initiate a hypochromic time-dependent red-shift for the surface plasmon resonance maximum. MD simulations reflect large perturbations to enzyme conformations by fluctuations of both rmsd and B-factors. Increase in changes to electrostatic potentials within the enzyme, especially, with chain B, suggest hydrophobic interactions for the binding of the AgNP. This is supported by changes to mainchain and sidechain dihedrals for many hydrophobic amino acid including Cys95, Trp6 and Trp42. Circular dichroism spectra reveal disappearance of α-helices and β-sheets and increase in random coil first from chain B then chain A. During initial stages of the interactive simulation the enzyme is conformational flexible to accommodate the AgNP, that docks with the enzyme under a cooperative mechanism, until a more stable structure is formed at convergence. There is a decrease in size of the HIVPR–AgNP complex measured by changes to the gyration radius supporting evidence that the AgNP associates, initially, with chain B.
- Full Text: false
- Authors: Whiteley, Chris G , Shing, C-Y , Kuo, C-C , Lee, Duu-Jong
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/67105 , vital:29032 , https://doi.org/10.1016/j.jtice.2015.10.029
- Description: publisher version , This interaction of silver nanoparticles (AgNP) with human immune-deficiency virus aspartic protease (HIVPR) is examined by molecular dynamics simulation using the Colores (Situs) package and biophysical techniques using UV–vis spectroscopy, dynamic light scattering, transmission electron microscopy and circular dichroism. The ‘docking’ of AgNP with HIVPR creates a complex [AgNP–HIVPR] to initiate a hypochromic time-dependent red-shift for the surface plasmon resonance maximum. MD simulations reflect large perturbations to enzyme conformations by fluctuations of both rmsd and B-factors. Increase in changes to electrostatic potentials within the enzyme, especially, with chain B, suggest hydrophobic interactions for the binding of the AgNP. This is supported by changes to mainchain and sidechain dihedrals for many hydrophobic amino acid including Cys95, Trp6 and Trp42. Circular dichroism spectra reveal disappearance of α-helices and β-sheets and increase in random coil first from chain B then chain A. During initial stages of the interactive simulation the enzyme is conformational flexible to accommodate the AgNP, that docks with the enzyme under a cooperative mechanism, until a more stable structure is formed at convergence. There is a decrease in size of the HIVPR–AgNP complex measured by changes to the gyration radius supporting evidence that the AgNP associates, initially, with chain B.
- Full Text: false
Dridex: Analysis of the traffic and automatic generation of IOCs
- Rudman, Lauren, Irwin, Barry V W
- Authors: Rudman, Lauren , Irwin, Barry V W
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/429525 , vital:72619 , https://ieeexplore.ieee.org/abstract/document/7802932
- Description: In this paper we present a framework that generates network Indicators of Compromise (IOC) automatically from a malware sample after dynamic runtime analysis. The framework addresses the limitations of manual Indicator of Compromise generation and utilises sandbox environment to perform the malware analysis in. We focus on the generation of network based IOCs from captured traffic files (PCAPs) generated by the dynamic malware analysis. The Cuckoo Sandbox environment is used for the analysis and the setup is described in detail. Accordingly, we discuss the concept of IOCs and the popular formats used as there is currently no standard. As an example of how the proof-of-concept framework can be used, we chose 100 Dridex malware samples and evaluated the traffic and showed what can be used for the generation of network-based IOCs. Results of our system confirm that we can create IOCs from dynamic malware analysis and avoid the legitimate background traffic originating from the sandbox system. We also briefly discuss the sharing of, and application of the generated IOCs and the number of systems that can be used to share them. Lastly we discuss how they can be useful in combating cyber threats.
- Full Text:
- Authors: Rudman, Lauren , Irwin, Barry V W
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/429525 , vital:72619 , https://ieeexplore.ieee.org/abstract/document/7802932
- Description: In this paper we present a framework that generates network Indicators of Compromise (IOC) automatically from a malware sample after dynamic runtime analysis. The framework addresses the limitations of manual Indicator of Compromise generation and utilises sandbox environment to perform the malware analysis in. We focus on the generation of network based IOCs from captured traffic files (PCAPs) generated by the dynamic malware analysis. The Cuckoo Sandbox environment is used for the analysis and the setup is described in detail. Accordingly, we discuss the concept of IOCs and the popular formats used as there is currently no standard. As an example of how the proof-of-concept framework can be used, we chose 100 Dridex malware samples and evaluated the traffic and showed what can be used for the generation of network-based IOCs. Results of our system confirm that we can create IOCs from dynamic malware analysis and avoid the legitimate background traffic originating from the sandbox system. We also briefly discuss the sharing of, and application of the generated IOCs and the number of systems that can be used to share them. Lastly we discuss how they can be useful in combating cyber threats.
- Full Text:
Dung beetle (Coleoptera Scarabaeoidea) assemblages in the western Italian Alps: benchmark data for land use monitoring
- Tocco, Claudia, Villet, Martin H
- Authors: Tocco, Claudia , Villet, Martin H
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441361 , vital:73879 , 10.3897/BDJ.4.e10059
- Description: Traditional agro-pastoral practices are in decline over much of the Alps (MacDonald et al. 2000), leading to shrub and tree encroachment, and this represents one of the main threats for the conservation of alpine biodiversity, as many plant and animal species are dependent on the presence of semi-natural open habitats. However, quantifying this environmental change and assessing its impact on biodiversity may be difficult, especially in the context of sparse historical survey data. The accessibility of contemporary data about local biodiversity surveys in general, and indicator taxa in particular, is an essential consideration for planning future evaluations of conservation status in the Alps and for conservation plans that use ecological indicators to monitor temporal changes in biodiversity. Dung beetles are important ecosystem service providers (Nichols et al. 2008) that have been assessed as a good ecological indicator taxon in several studies (reviewed by Nichols and Gardner 2011), and although the Alps is perhaps one of the best-studied regions in respect of dung beetles, there are still only eight readily-accessible publications. We have augmented and comprehensively reviewed the data from these publications.
- Full Text:
- Authors: Tocco, Claudia , Villet, Martin H
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441361 , vital:73879 , 10.3897/BDJ.4.e10059
- Description: Traditional agro-pastoral practices are in decline over much of the Alps (MacDonald et al. 2000), leading to shrub and tree encroachment, and this represents one of the main threats for the conservation of alpine biodiversity, as many plant and animal species are dependent on the presence of semi-natural open habitats. However, quantifying this environmental change and assessing its impact on biodiversity may be difficult, especially in the context of sparse historical survey data. The accessibility of contemporary data about local biodiversity surveys in general, and indicator taxa in particular, is an essential consideration for planning future evaluations of conservation status in the Alps and for conservation plans that use ecological indicators to monitor temporal changes in biodiversity. Dung beetles are important ecosystem service providers (Nichols et al. 2008) that have been assessed as a good ecological indicator taxon in several studies (reviewed by Nichols and Gardner 2011), and although the Alps is perhaps one of the best-studied regions in respect of dung beetles, there are still only eight readily-accessible publications. We have augmented and comprehensively reviewed the data from these publications.
- Full Text:
Dynamic changes of soil surface organic carbon under different mulching practices in citrus orchards on sloping land
- Gu, Chiming, Liu, Yi, Mohamed, Ibrahim, Zhang, Runhua, Wang, Xiao, Nie, Xinxin, Jiang, Min, Brooks, Margot, Chen, Fang, Li, Zhiguo
- Authors: Gu, Chiming , Liu, Yi , Mohamed, Ibrahim , Zhang, Runhua , Wang, Xiao , Nie, Xinxin , Jiang, Min , Brooks, Margot , Chen, Fang , Li, Zhiguo
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/${Handle} , vital:28997 , ISSN 0168384 , https://doi.org/10.1371/journal.pone.0168384
- Description: Publisher version , Mulching management has been used in many places all over the world to improve agricultural sustainability. However, the cycling of carbon in the soil under applications of mulch on sloping arable land is not yet fully understood. A four-year field experiment was carried out in Xiaofuling watershed of Danjiangkou reservoir in China. The object was to evaluate the effects of the application of straw mulch (ST) and grass mulch (GT) on dynamic changes in soil organic carbon and its fractions. Results showed that mulch applied on the soil surface increased the contents of SOC and its active fractions in the soil. Compared to the control without cover (CK), ST and GT treatments increased the contents of SOC, LOC, DOC, POC and EOC by 14.73%, 16.5%, 22.5%, 41.5% and 21%, respectively, in the 0–40 cm soil layer, and by 17%, 14%, 19%, and 30%, respectively, in the 0–100 cm soil layer. The contents of organic carbon and its active fractions decreased with increasing soil depth in all of the treatments. SOC was accumulated in the period of December to the following March. The contents of soil DOC and LOC were high in January to March, while the contents of soil POC and EOC were high in June to September. The relative contents of soil organic carbon fractions were POC > EOC > LOC > DOC over the four years. Straw mulching had no significant effect on the changes in soil organic carbon active fractions during the different periods. Based on this long-term field experiment in Danjiangkou reservoir, we found that straw mulching had a significant effect on soil, increasing SOC content and stock in slopping arable land, and that live grass mulching was more effective than rice straw mulching. We discuss possible optimal periods for the implementation of mulching practices on sloping land.
- Full Text:
- Authors: Gu, Chiming , Liu, Yi , Mohamed, Ibrahim , Zhang, Runhua , Wang, Xiao , Nie, Xinxin , Jiang, Min , Brooks, Margot , Chen, Fang , Li, Zhiguo
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/${Handle} , vital:28997 , ISSN 0168384 , https://doi.org/10.1371/journal.pone.0168384
- Description: Publisher version , Mulching management has been used in many places all over the world to improve agricultural sustainability. However, the cycling of carbon in the soil under applications of mulch on sloping arable land is not yet fully understood. A four-year field experiment was carried out in Xiaofuling watershed of Danjiangkou reservoir in China. The object was to evaluate the effects of the application of straw mulch (ST) and grass mulch (GT) on dynamic changes in soil organic carbon and its fractions. Results showed that mulch applied on the soil surface increased the contents of SOC and its active fractions in the soil. Compared to the control without cover (CK), ST and GT treatments increased the contents of SOC, LOC, DOC, POC and EOC by 14.73%, 16.5%, 22.5%, 41.5% and 21%, respectively, in the 0–40 cm soil layer, and by 17%, 14%, 19%, and 30%, respectively, in the 0–100 cm soil layer. The contents of organic carbon and its active fractions decreased with increasing soil depth in all of the treatments. SOC was accumulated in the period of December to the following March. The contents of soil DOC and LOC were high in January to March, while the contents of soil POC and EOC were high in June to September. The relative contents of soil organic carbon fractions were POC > EOC > LOC > DOC over the four years. Straw mulching had no significant effect on the changes in soil organic carbon active fractions during the different periods. Based on this long-term field experiment in Danjiangkou reservoir, we found that straw mulching had a significant effect on soil, increasing SOC content and stock in slopping arable land, and that live grass mulching was more effective than rice straw mulching. We discuss possible optimal periods for the implementation of mulching practices on sloping land.
- Full Text:
E-Government as a Means to Support Communal, Large ICT Infrastructure in Poor Areas
- Gumbo, Sibukelo, Terzoli, Alfredo, Tsietsi, Mosiuoa
- Authors: Gumbo, Sibukelo , Terzoli, Alfredo , Tsietsi, Mosiuoa
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/431287 , vital:72761 , https://www.academic-bookshop.com/ourshop/prod_5067238-ECEG-2016-Proceedings-of-the-16th-European-Conference-on-eGovernment.html
- Description: Citizen-facing e-Government appears inevitable given current technol-ogy trends, and certainly has many advantages. One overlooked bene-fit, in our opinion, is its potential to make financially viable communal “large ICT” installations, which would diffuse ICT in poor communities where ICT is currently absent.(By “large ICT” we refer to end-user equipment such as desktops or laptops, on which would be possible to produce content, including software. The presence of “large ICT” in a community is critical in our opinion for the empowerment of the commu-nity, especially its younger component.) This paper explores this poten-tial in e-Government, describing a model conceptualized in the Siyakhu-la Living Lab in South Africa and partially implemented, through an inte-gration platform named “TeleWeaver”. The model behind TeleWeaver is an adaptation of the classic Internet business model-whereby users of services do not directly pay for the services they use. This model is especially relevant currently in South Africa, because of the an-nouncement by the government to pilot connecting to the internet gov-ernment facilities, including schools, in eight poor district municipalities.
- Full Text:
- Authors: Gumbo, Sibukelo , Terzoli, Alfredo , Tsietsi, Mosiuoa
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/431287 , vital:72761 , https://www.academic-bookshop.com/ourshop/prod_5067238-ECEG-2016-Proceedings-of-the-16th-European-Conference-on-eGovernment.html
- Description: Citizen-facing e-Government appears inevitable given current technol-ogy trends, and certainly has many advantages. One overlooked bene-fit, in our opinion, is its potential to make financially viable communal “large ICT” installations, which would diffuse ICT in poor communities where ICT is currently absent.(By “large ICT” we refer to end-user equipment such as desktops or laptops, on which would be possible to produce content, including software. The presence of “large ICT” in a community is critical in our opinion for the empowerment of the commu-nity, especially its younger component.) This paper explores this poten-tial in e-Government, describing a model conceptualized in the Siyakhu-la Living Lab in South Africa and partially implemented, through an inte-gration platform named “TeleWeaver”. The model behind TeleWeaver is an adaptation of the classic Internet business model-whereby users of services do not directly pay for the services they use. This model is especially relevant currently in South Africa, because of the an-nouncement by the government to pilot connecting to the internet gov-ernment facilities, including schools, in eight poor district municipalities.
- Full Text:
Ecological knowledge among communities, managers and scientists: Bridging divergent perspectives to improve forest management outcomes
- Rist, Lucy, Shackleton, Charlie M, Gadamus, Lily, Chapin, F Stuart, Made Gowda, C, Setty, Siddappa R, Kannan, Ramesh, Shaanker, Ramanan Uma
- Authors: Rist, Lucy , Shackleton, Charlie M , Gadamus, Lily , Chapin, F Stuart , Made Gowda, C , Setty, Siddappa R , Kannan, Ramesh , Shaanker, Ramanan Uma
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/182124 , vital:43802 , xlink:href="https://doi.org/10.1007/s00267-015-0647-1"
- Description: Multiple actors are typically involved in forest management, namely communities, managers and researchers. In such cases, suboptimal management outcomes may, in addition to other factors, be symptomatic of a divergence in perspectives among these actors driven by fundamental differences in ecological knowledge. We examine the degree of congruence between the understandings of actors surrounding key issues of management concern in three case studies from tropical, subtropical and boreal forests. We identify commonly encountered points of divergence in ecological knowledge relating to key management processes and issues. We use these to formulate seven hypotheses about differences in the bodies of knowledge that frequently underlie communication and learning failures in forest management contexts where multiple actors are involved and outcomes are judged to be suboptimal. Finally, we present a set of propositions to acknowledge and narrow these differences. A more complete recognition of the full triangulation between all actors involved, and of the influence that fundamental differences in ecological knowledge can exert, may help lead to a more fruitful integration between local knowledge and practice, manager knowledge and practice, and contemporary science in forest management.
- Full Text:
- Authors: Rist, Lucy , Shackleton, Charlie M , Gadamus, Lily , Chapin, F Stuart , Made Gowda, C , Setty, Siddappa R , Kannan, Ramesh , Shaanker, Ramanan Uma
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/182124 , vital:43802 , xlink:href="https://doi.org/10.1007/s00267-015-0647-1"
- Description: Multiple actors are typically involved in forest management, namely communities, managers and researchers. In such cases, suboptimal management outcomes may, in addition to other factors, be symptomatic of a divergence in perspectives among these actors driven by fundamental differences in ecological knowledge. We examine the degree of congruence between the understandings of actors surrounding key issues of management concern in three case studies from tropical, subtropical and boreal forests. We identify commonly encountered points of divergence in ecological knowledge relating to key management processes and issues. We use these to formulate seven hypotheses about differences in the bodies of knowledge that frequently underlie communication and learning failures in forest management contexts where multiple actors are involved and outcomes are judged to be suboptimal. Finally, we present a set of propositions to acknowledge and narrow these differences. A more complete recognition of the full triangulation between all actors involved, and of the influence that fundamental differences in ecological knowledge can exert, may help lead to a more fruitful integration between local knowledge and practice, manager knowledge and practice, and contemporary science in forest management.
- Full Text:
Economic evaluation of water loss saving due to the biological control of water hyacinth at New Year’s Dam, Eastern Cape province, South Africa
- Fraser, Gavin C G, Hill, Martin P, Martin, J A
- Authors: Fraser, Gavin C G , Hill, Martin P , Martin, J A
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/69341 , vital:29502 , https://doi.org/10.2989/16085914.2016.1151765
- Description: Water hyacinth Eichhornia crassipes is considered the most damaging aquatic weed in the world. However, few studies have quantified the impact of this weed economically and ecologically, and even fewer studies have quantified the benefits of its control. This paper focuses on water loss saving as the benefit derived from biological control of this plant between 1990 and 2013 at New Year’s Dam, Alicedale, Eastern Cape, South Africa. Estimates of water loss due to evapotranspiration from water hyacinth vary significantly; therefore, the study used three different rates, high, medium and low. A conservative raw agriculture value of R 0.26 per m3 was used to calculate the benefits derived by the water saved. The present benefit and cost values were determined using 10% and 5% discount rates. The benefit/cost ratio at the low evapotranspiration rate was less than one, implying that biological control was not economically viable but, at the higher evapotranspiration rates, the return justified the costs of biological control. However, at the marginal value product of water, the inclusion of the costs of damage to infrastructure, or the adverse effects of water hyacinth on biodiversity, would justify the use of biological control, even at the low transpiration rate.
- Full Text: false
- Authors: Fraser, Gavin C G , Hill, Martin P , Martin, J A
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/69341 , vital:29502 , https://doi.org/10.2989/16085914.2016.1151765
- Description: Water hyacinth Eichhornia crassipes is considered the most damaging aquatic weed in the world. However, few studies have quantified the impact of this weed economically and ecologically, and even fewer studies have quantified the benefits of its control. This paper focuses on water loss saving as the benefit derived from biological control of this plant between 1990 and 2013 at New Year’s Dam, Alicedale, Eastern Cape, South Africa. Estimates of water loss due to evapotranspiration from water hyacinth vary significantly; therefore, the study used three different rates, high, medium and low. A conservative raw agriculture value of R 0.26 per m3 was used to calculate the benefits derived by the water saved. The present benefit and cost values were determined using 10% and 5% discount rates. The benefit/cost ratio at the low evapotranspiration rate was less than one, implying that biological control was not economically viable but, at the higher evapotranspiration rates, the return justified the costs of biological control. However, at the marginal value product of water, the inclusion of the costs of damage to infrastructure, or the adverse effects of water hyacinth on biodiversity, would justify the use of biological control, even at the low transpiration rate.
- Full Text: false
Editorial
- Schudel, Ingrid J, Le Grange, Lesley, Reddy, Chris
- Authors: Schudel, Ingrid J , Le Grange, Lesley , Reddy, Chris
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/387193 , vital:68214 , xlink:href="https://www.ajol.info/index.php/sajee/article/view/167508"
- Description: The unprecedented levels of human influence on the global enviroment have drawn the attention of scientists to the extent that in 2002, the Nobel Laureate, Paul Crutzen, helped in postulating a new geological epoch named the Anthropocene (Crutzen, 2002). This idea is not new and Crutzen describes an observation by an Italian geologist named Antonio Stoppani who, in 1873, spoke about an 'anthropozoic era'. Stoppani described this era as a 'new telluric force which in power and universality may be compared to the greater forces of earth' (Stoppani, 1873 in Crutzen, 2002).
- Full Text: false
- Authors: Schudel, Ingrid J , Le Grange, Lesley , Reddy, Chris
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/387193 , vital:68214 , xlink:href="https://www.ajol.info/index.php/sajee/article/view/167508"
- Description: The unprecedented levels of human influence on the global enviroment have drawn the attention of scientists to the extent that in 2002, the Nobel Laureate, Paul Crutzen, helped in postulating a new geological epoch named the Anthropocene (Crutzen, 2002). This idea is not new and Crutzen describes an observation by an Italian geologist named Antonio Stoppani who, in 1873, spoke about an 'anthropozoic era'. Stoppani described this era as a 'new telluric force which in power and universality may be compared to the greater forces of earth' (Stoppani, 1873 in Crutzen, 2002).
- Full Text: false
Effects of pluronic silica nanoparticles on the photophysical and photodynamic therapy behavior of triphenyl-p-phenoxy benzoic acid metalloporphyrins
- Managa, Muthumuni, Britton, Jonathan, Prinsloo, Earl, Nyokong, Tebello
- Authors: Managa, Muthumuni , Britton, Jonathan , Prinsloo, Earl , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/239698 , vital:50756 , xlink:href="https://doi.org/10.1080/00958972.2016.1236372"
- Description: 5, 10, 15, Triphenyl-20-p-phenoxy benzoic acid porphyrins (P) containing Zn (ZnP), Ga (GaP), and Si (SiP) were synthesized and conjugated to pluronic-silica (PluS) nanoparticles (NPs) where the fluorescence and singlet oxygen generating behavior of the porphyrins were investigated. The highest singlet oxygen quantum yield (ΦΔ) was obtained for ZnP. When the porphyrins were conjugated to the PluS NPs, the ΦΔ was quenched and fluorescence was enhanced. The pore size of the NPs upon conjugation decreased from 18.9 nm for PluS NPs to 2.4 nm (for ZnP as an example) as determined by applying the Brunauer–Emmett–Teller method. The porphyrin complexes and their conjugates were tested for their photodynamic therapy (PDT) activity on MCF-7 breast cancer cells. It was found that ZnP and its conjugate showed the highest PDT activity. The p > 0.05 indicated that ZnP is significantly different than GaP and SiP.
- Full Text:
- Authors: Managa, Muthumuni , Britton, Jonathan , Prinsloo, Earl , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/239698 , vital:50756 , xlink:href="https://doi.org/10.1080/00958972.2016.1236372"
- Description: 5, 10, 15, Triphenyl-20-p-phenoxy benzoic acid porphyrins (P) containing Zn (ZnP), Ga (GaP), and Si (SiP) were synthesized and conjugated to pluronic-silica (PluS) nanoparticles (NPs) where the fluorescence and singlet oxygen generating behavior of the porphyrins were investigated. The highest singlet oxygen quantum yield (ΦΔ) was obtained for ZnP. When the porphyrins were conjugated to the PluS NPs, the ΦΔ was quenched and fluorescence was enhanced. The pore size of the NPs upon conjugation decreased from 18.9 nm for PluS NPs to 2.4 nm (for ZnP as an example) as determined by applying the Brunauer–Emmett–Teller method. The porphyrin complexes and their conjugates were tested for their photodynamic therapy (PDT) activity on MCF-7 breast cancer cells. It was found that ZnP and its conjugate showed the highest PDT activity. The p > 0.05 indicated that ZnP is significantly different than GaP and SiP.
- Full Text:
Effects of substrate on essential fatty acids produced by phytobenthos in an austral temperate river system
- Dalu, Tatenda, Galloway, Aaron W E, Richoux, Nicole B, Froneman, P William
- Authors: Dalu, Tatenda , Galloway, Aaron W E , Richoux, Nicole B , Froneman, P William
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/68002 , vital:29179 , https://doi.org/10.1086/688698
- Description: Publisher version , Aquatic and riparian habitats increasingly are affected by anthropogenic stressors, but the effects of these stressors on the nutritional quality of primary producers are often unknown. We compared essential fatty acids (EFAs) in the phytobenthos (benthic algae) growing on different substrate types (bricks, clay tiles, rocks, macrophytes, and sediments) at 2 river sites subject to differing anthropogenic stressors (using nutrient concentration as a proxy) in a temperate southern hemisphere location. We hypothesized that the fatty acid (FA) content of phytobenthos changes in response to shifts in local nutrient availability but not substrate type. EFA content (18∶2ω6, 18∶3ω3, 20∶4ω6, 20∶5ω3, and 22∶6ω3) in the phytobenthos differed overall among substrates, sites, and seasons and was generally greater in summer than in autumn and winter. EFA content was significantly greater on artificial than natural substrates and was greater at the nutrient-enriched downstream site than at the upstream site. The response of EFA content at the downstream site suggests that land use affected the synthesis of EFAs by phytobenthos and, hence, food quality for aquatic consumers. These findings indicate a potential link between physical factors, such as substrate availability and land management, and the quality of basal food resources available to primary consumers in aquatic food webs.
- Full Text: false
- Authors: Dalu, Tatenda , Galloway, Aaron W E , Richoux, Nicole B , Froneman, P William
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/68002 , vital:29179 , https://doi.org/10.1086/688698
- Description: Publisher version , Aquatic and riparian habitats increasingly are affected by anthropogenic stressors, but the effects of these stressors on the nutritional quality of primary producers are often unknown. We compared essential fatty acids (EFAs) in the phytobenthos (benthic algae) growing on different substrate types (bricks, clay tiles, rocks, macrophytes, and sediments) at 2 river sites subject to differing anthropogenic stressors (using nutrient concentration as a proxy) in a temperate southern hemisphere location. We hypothesized that the fatty acid (FA) content of phytobenthos changes in response to shifts in local nutrient availability but not substrate type. EFA content (18∶2ω6, 18∶3ω3, 20∶4ω6, 20∶5ω3, and 22∶6ω3) in the phytobenthos differed overall among substrates, sites, and seasons and was generally greater in summer than in autumn and winter. EFA content was significantly greater on artificial than natural substrates and was greater at the nutrient-enriched downstream site than at the upstream site. The response of EFA content at the downstream site suggests that land use affected the synthesis of EFAs by phytobenthos and, hence, food quality for aquatic consumers. These findings indicate a potential link between physical factors, such as substrate availability and land management, and the quality of basal food resources available to primary consumers in aquatic food webs.
- Full Text: false
Effects of the invasive shrub, Lantana camara, on soil properties in the Eastern Cape, South Africa
- Ruwanza, Sheunesu, Shackleton, Charlie M
- Authors: Ruwanza, Sheunesu , Shackleton, Charlie M
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/180459 , vital:43391 , xlink:href="https://doi.org/10.1111/wbm.12094"
- Description: Lantana camara L. is an invasive alien shrub of worldwide significance due to its impacts on biodiversity. It can alter the soil properties of invaded ecosystems and, as a result, affect management outcomes. However, knowledge on the impacts of L. camara on soil properties is scanty, especially in South Africa, despite the pervasive presence of the plant in the country. In this comparative study, the soils underneath L. camara were assessed in order to determine if they had different properties (soil physico-chemical properties, penetration resistance, infiltration, hydraulic conductivity and water repellency) in comparison to the soils in adjacent natural sites in the Eastern Cape, South Africa. Soil samples were collected from the top soil beneath the canopy of both L. camara-invaded and adjacent natural sites in five different locations over three summer months. The soils that were collected from underneath L. camara had a significantly higher total C, total P, gravimetric soil moisture (in November and December) and were repellent, compared to the soils in the adjacent natural sites. Soil penetration resistance was significantly higher in the natural sites than in the L. camara-invaded sites. The soil hydraulic conductivity, soil infiltration rate, soil pH, exchangeable cations and total N showed no significant difference between the invaded and the natural sites. It appears that the soils underneath L. camara have a high total C and total P, soil moisture and are repellent, thus influencing nutrient cycling, potentially making the soil properties underneath it ideal for its own growth. This could contribute to the success of L. camara as an invasive species.
- Full Text:
- Authors: Ruwanza, Sheunesu , Shackleton, Charlie M
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/180459 , vital:43391 , xlink:href="https://doi.org/10.1111/wbm.12094"
- Description: Lantana camara L. is an invasive alien shrub of worldwide significance due to its impacts on biodiversity. It can alter the soil properties of invaded ecosystems and, as a result, affect management outcomes. However, knowledge on the impacts of L. camara on soil properties is scanty, especially in South Africa, despite the pervasive presence of the plant in the country. In this comparative study, the soils underneath L. camara were assessed in order to determine if they had different properties (soil physico-chemical properties, penetration resistance, infiltration, hydraulic conductivity and water repellency) in comparison to the soils in adjacent natural sites in the Eastern Cape, South Africa. Soil samples were collected from the top soil beneath the canopy of both L. camara-invaded and adjacent natural sites in five different locations over three summer months. The soils that were collected from underneath L. camara had a significantly higher total C, total P, gravimetric soil moisture (in November and December) and were repellent, compared to the soils in the adjacent natural sites. Soil penetration resistance was significantly higher in the natural sites than in the L. camara-invaded sites. The soil hydraulic conductivity, soil infiltration rate, soil pH, exchangeable cations and total N showed no significant difference between the invaded and the natural sites. It appears that the soils underneath L. camara have a high total C and total P, soil moisture and are repellent, thus influencing nutrient cycling, potentially making the soil properties underneath it ideal for its own growth. This could contribute to the success of L. camara as an invasive species.
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Efficient energy transfer in ethynyl bridged corrole–BODIPY dyads
- Yan, Yu, Wu, Fan, Qin, Jiawei, Xu, Haijun, Shi, Maohu, Zhou, Jingfeng, Mack, John, Fomo, Gertrude, Nyokong, Tebello, Shen, Zhen
- Authors: Yan, Yu , Wu, Fan , Qin, Jiawei , Xu, Haijun , Shi, Maohu , Zhou, Jingfeng , Mack, John , Fomo, Gertrude , Nyokong, Tebello , Shen, Zhen
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/240899 , vital:50883 , xlink:href="https://doi.org/10.1039/C6RA12271J"
- Description: A series of new corrole–BODIPY dyads bridged by ethynyl linker moieties have been synthesized in high yields and fully characterized. The direction of energy transfer upon electronic excitation has been explored, and was found to be dependent on the number of corrole rings and their connection position on the BODIPY core. Intense bands in the absorption spectrum cover most of the visible region, which is potentially advantageous for capturing solar energy. Studies on the excitation spectra and lifetimes suggest that the energy transfer efficiency between the BODIPY and corrole moieties reaches almost 85%, which appears to be efficient in the context of energy transfer within the singlet manifold.
- Full Text:
- Authors: Yan, Yu , Wu, Fan , Qin, Jiawei , Xu, Haijun , Shi, Maohu , Zhou, Jingfeng , Mack, John , Fomo, Gertrude , Nyokong, Tebello , Shen, Zhen
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/240899 , vital:50883 , xlink:href="https://doi.org/10.1039/C6RA12271J"
- Description: A series of new corrole–BODIPY dyads bridged by ethynyl linker moieties have been synthesized in high yields and fully characterized. The direction of energy transfer upon electronic excitation has been explored, and was found to be dependent on the number of corrole rings and their connection position on the BODIPY core. Intense bands in the absorption spectrum cover most of the visible region, which is potentially advantageous for capturing solar energy. Studies on the excitation spectra and lifetimes suggest that the energy transfer efficiency between the BODIPY and corrole moieties reaches almost 85%, which appears to be efficient in the context of energy transfer within the singlet manifold.
- Full Text:
Electrocatalytic activity of nanocomposites of sulphur doped graphene oxide and nanosized cobalt phthalocyanines
- Shumba, Munyaradzi, Nyokong, Tebello
- Authors: Shumba, Munyaradzi , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188530 , vital:44762 , xlink:href="https://doi.org/10.1002/elan.201600226"
- Description: In this work we explore the electrocatalytic activity of nanocomposites of reduced sulphur doped graphene oxide nanosheets (rSDGONS) and cobalt phthalocyanine (CoPc) or cobalt tetra amino phthalocyanine (CoTAPc) towards hydrogen peroxide. Transmission electron microscopy, scanning electron microscopy, X-ray photon spectroscopy, X-ray diffraction, chronoamperometry, linear scan voltammetry and cyclic voltammetry were used to characterize the nanocomposites. Nanosized CoPc showed superior (in terms of currents) electrocatalytic oxidation and reduction of hydrogen peroxide compared to CoTAPc nanoparticles (CoTAPcNP). The lowest detection limit was obtained for hydrogen peroxide oxidation on electrodes modified with CoPcNP-rSDGONS at 1.49 µM. The same electrode gave a high adsorption equilibrium constant of 1.27×103 mol−1 and a Gibbs free energy of −17.71 kJ/mol, indicative of a spontaneous reaction on the electrode surface.
- Full Text:
- Authors: Shumba, Munyaradzi , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188530 , vital:44762 , xlink:href="https://doi.org/10.1002/elan.201600226"
- Description: In this work we explore the electrocatalytic activity of nanocomposites of reduced sulphur doped graphene oxide nanosheets (rSDGONS) and cobalt phthalocyanine (CoPc) or cobalt tetra amino phthalocyanine (CoTAPc) towards hydrogen peroxide. Transmission electron microscopy, scanning electron microscopy, X-ray photon spectroscopy, X-ray diffraction, chronoamperometry, linear scan voltammetry and cyclic voltammetry were used to characterize the nanocomposites. Nanosized CoPc showed superior (in terms of currents) electrocatalytic oxidation and reduction of hydrogen peroxide compared to CoTAPc nanoparticles (CoTAPcNP). The lowest detection limit was obtained for hydrogen peroxide oxidation on electrodes modified with CoPcNP-rSDGONS at 1.49 µM. The same electrode gave a high adsorption equilibrium constant of 1.27×103 mol−1 and a Gibbs free energy of −17.71 kJ/mol, indicative of a spontaneous reaction on the electrode surface.
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Electrode modification using alkyne manganese phthalocyanine and click chemistry for electrocatalysis
- O'Donoghue, Charles St John Nqwabuko, Fomo, Gertrude, Nyokong, Tebello
- Authors: O'Donoghue, Charles St John Nqwabuko , Fomo, Gertrude , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188541 , vital:44763 , xlink:href="https://doi.org/10.1002/elan.201600379"
- Description: In this work, azidobenzene diazonium salt is grafted onto a glassy carbon electrode (GCE) followed by clicking of manganese tetrahexynyl phthalocyanine for the electrocatalysis of hydrazine. The GCE was first grafted via the in situ diazotization of a diazonium salt, rendering the GCE surface layered with azide groups. From this point, the 1,3-dipolar cycloaddition reaction, catalyzed by a copper catalyst was utilized to ‘click’ the manganese tetrahexynyl phthalocyanine to the surface of the grafted GCE. This new platform was then characterized using cyclic voltammetry (CV), scanning electrochemical microscopy (SECM) and X-ray photoelectron spectroscopy (XPS). Based on the cyclic voltammetry calibration curve of electrocatalysis for hydrazine, the clicked Mn phthalocyanine electrode proved to be an effective sensor with a sensitivity of 27.38 µA mM−1 and the limit of detection (LoD) of 15.4 pM which is a great improvement compared to other reported sensors for this analyte.
- Full Text:
- Authors: O'Donoghue, Charles St John Nqwabuko , Fomo, Gertrude , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188541 , vital:44763 , xlink:href="https://doi.org/10.1002/elan.201600379"
- Description: In this work, azidobenzene diazonium salt is grafted onto a glassy carbon electrode (GCE) followed by clicking of manganese tetrahexynyl phthalocyanine for the electrocatalysis of hydrazine. The GCE was first grafted via the in situ diazotization of a diazonium salt, rendering the GCE surface layered with azide groups. From this point, the 1,3-dipolar cycloaddition reaction, catalyzed by a copper catalyst was utilized to ‘click’ the manganese tetrahexynyl phthalocyanine to the surface of the grafted GCE. This new platform was then characterized using cyclic voltammetry (CV), scanning electrochemical microscopy (SECM) and X-ray photoelectron spectroscopy (XPS). Based on the cyclic voltammetry calibration curve of electrocatalysis for hydrazine, the clicked Mn phthalocyanine electrode proved to be an effective sensor with a sensitivity of 27.38 µA mM−1 and the limit of detection (LoD) of 15.4 pM which is a great improvement compared to other reported sensors for this analyte.
- Full Text:
Electrode modification using nanocomposites of boron or nitrogen doped graphene oxide and cobalt (II) tetra aminophenoxy phthalocyanine nanoparticles
- Shumba, Munyaradzi, Nyokong, Tebello
- Authors: Shumba, Munyaradzi , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188699 , vital:44777 , xlink:href="https://doi.org/10.1016/j.electacta.2016.02.166"
- Description: Reduced graphene oxide nanosheets (rGONS), reduced boron doped graphene oxide nanosheets (rBDGONS) and reduced nitrogen doped graphene oxide nanosheets (rNDGONS) and their composites with cobalt tetra aminophenoxy phthalocyanine nanoparticles (CoTAPhPcNP) were employed towards the detection of hydrogen peroxide. The nanomaterials were characterized by absorption spectroscopy, transmission electron microscopy, scanning electron microscopy, Raman spectroscopy, X-ray diffraction, X-ray photoelectron spectroscopy, linear sweep voltammetry and cyclic voltammetry. rNDGONS showed excellent electrooxidation and electroreduction of hydrogen peroxide supported by superior surface coverage values. The inclusion of nanosized Pc significantly lowered the reduction overpotential. CoTAPhPcNP-rNDGONS-GCE gave a sensitivity of 39.30 mA/M, catalytic rate constant of 1 × 103 M−1 s−1 and a detection limit of 8.2 nM. An adsorption equilibrium constant and Gibbs free energy of 1.26 × 103 M−1 and −17.69 kJ mol−1 respectively were observed.
- Full Text:
- Authors: Shumba, Munyaradzi , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188699 , vital:44777 , xlink:href="https://doi.org/10.1016/j.electacta.2016.02.166"
- Description: Reduced graphene oxide nanosheets (rGONS), reduced boron doped graphene oxide nanosheets (rBDGONS) and reduced nitrogen doped graphene oxide nanosheets (rNDGONS) and their composites with cobalt tetra aminophenoxy phthalocyanine nanoparticles (CoTAPhPcNP) were employed towards the detection of hydrogen peroxide. The nanomaterials were characterized by absorption spectroscopy, transmission electron microscopy, scanning electron microscopy, Raman spectroscopy, X-ray diffraction, X-ray photoelectron spectroscopy, linear sweep voltammetry and cyclic voltammetry. rNDGONS showed excellent electrooxidation and electroreduction of hydrogen peroxide supported by superior surface coverage values. The inclusion of nanosized Pc significantly lowered the reduction overpotential. CoTAPhPcNP-rNDGONS-GCE gave a sensitivity of 39.30 mA/M, catalytic rate constant of 1 × 103 M−1 s−1 and a detection limit of 8.2 nM. An adsorption equilibrium constant and Gibbs free energy of 1.26 × 103 M−1 and −17.69 kJ mol−1 respectively were observed.
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Electrode modification using nanocomposites of electropolymerised cobalt phthalocyanines supported on multiwalled carbon nanotubes
- Nyoni, Stephen, Mashazi, Philani N, Nyokong, Tebello
- Authors: Nyoni, Stephen , Mashazi, Philani N , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188730 , vital:44780 , xlink:href="https://doi.org/10.1007/s10008-015-2985-6"
- Description: A polymer of tetra(4)-(4,6-diaminopyrimidin-2-ylthio) phthalocyaninatocobalt(II) (CoPyPc) has been deposited over a multiwalled carbon nanotube (MWCNT) platform and its electrocatalytic properties investigated side by side with polymerized cobalt tetraamino phthalocyanine (CoTAPc). X-ray photoelectron spectroscopy, scanning electron microscopy and cyclic voltammetry studies were used for characterization of the prepared polymers of cobalt phthalocyanine derivatives and their nanocomposites. L-Cysteine was used as a test analyte for the electrocatalytic activity of the nanocomposites of polymerized cobalt phthalocyanines and multiwalled carbon nanotubes. The electrocatalytic activity of both polymerized cobalt phthalocyanines was found to be superior when polymerization was done on top of MWCNTs compared to bare glassy carbon electrode. A higher sensitivity for L-cysteine detection was obtained on CoTAPc compared to CoPyPc.
- Full Text:
- Authors: Nyoni, Stephen , Mashazi, Philani N , Nyokong, Tebello
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/188730 , vital:44780 , xlink:href="https://doi.org/10.1007/s10008-015-2985-6"
- Description: A polymer of tetra(4)-(4,6-diaminopyrimidin-2-ylthio) phthalocyaninatocobalt(II) (CoPyPc) has been deposited over a multiwalled carbon nanotube (MWCNT) platform and its electrocatalytic properties investigated side by side with polymerized cobalt tetraamino phthalocyanine (CoTAPc). X-ray photoelectron spectroscopy, scanning electron microscopy and cyclic voltammetry studies were used for characterization of the prepared polymers of cobalt phthalocyanine derivatives and their nanocomposites. L-Cysteine was used as a test analyte for the electrocatalytic activity of the nanocomposites of polymerized cobalt phthalocyanines and multiwalled carbon nanotubes. The electrocatalytic activity of both polymerized cobalt phthalocyanines was found to be superior when polymerization was done on top of MWCNTs compared to bare glassy carbon electrode. A higher sensitivity for L-cysteine detection was obtained on CoTAPc compared to CoPyPc.
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Elucidating Latent Mechanistic Complexity in Competing Acid-Catalyzed Reactions of Salicylaldehyde-Derived Baylis–Hillman Adducts
- Olomola, Temitope O, Klein, Rosalyn, Caira, Mino, R, Kaye, Perry T
- Authors: Olomola, Temitope O , Klein, Rosalyn , Caira, Mino, R , Kaye, Perry T
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442596 , vital:74010 , https://doi.org/10.1021/acs.joc.5b02372
- Description: 1H NMR-based kinetic studies have revealed the latent mechanistic complexity of deceptively simple hydrochloric acid-catalyzed reactions of salicylaldehyde-derived Baylis–Hillman adducts. Reactions conducted at 0 °C afforded 2-(chloromethyl)cinnamic acid derivatives as the major products and the corresponding 3-(chloromethyl)coumarin derivatives as the minor products. In reactions conducted in refluxing acetic acid, however, the 3-(chloromethyl)coumarin derivatives are the sole products. Variable-temperature 1H NMR analysis permitted the determination of the rate constants and kinetic parameters involved in the pseudo-first-order formation of (Z)-2-(chloromethyl)-3-(2-hydroxyphenyl)-2-propenoic acid. The kinetic data clearly preclude the operation of classical kinetic versus thermodynamic control and indicate the operation of three independent reaction pathways. Theoretical studies of these pathways undertaken at the B3LYP/6-31G(d) level permitted rationalization of the experimental data and provided insights into the possible mechanism of the enzymic E–Z isomerization and cyclization of (E)-cinnamic acid analogues to afford coumarins.
- Full Text:
- Authors: Olomola, Temitope O , Klein, Rosalyn , Caira, Mino, R , Kaye, Perry T
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/442596 , vital:74010 , https://doi.org/10.1021/acs.joc.5b02372
- Description: 1H NMR-based kinetic studies have revealed the latent mechanistic complexity of deceptively simple hydrochloric acid-catalyzed reactions of salicylaldehyde-derived Baylis–Hillman adducts. Reactions conducted at 0 °C afforded 2-(chloromethyl)cinnamic acid derivatives as the major products and the corresponding 3-(chloromethyl)coumarin derivatives as the minor products. In reactions conducted in refluxing acetic acid, however, the 3-(chloromethyl)coumarin derivatives are the sole products. Variable-temperature 1H NMR analysis permitted the determination of the rate constants and kinetic parameters involved in the pseudo-first-order formation of (Z)-2-(chloromethyl)-3-(2-hydroxyphenyl)-2-propenoic acid. The kinetic data clearly preclude the operation of classical kinetic versus thermodynamic control and indicate the operation of three independent reaction pathways. Theoretical studies of these pathways undertaken at the B3LYP/6-31G(d) level permitted rationalization of the experimental data and provided insights into the possible mechanism of the enzymic E–Z isomerization and cyclization of (E)-cinnamic acid analogues to afford coumarins.
- Full Text: