In silico analysis of plasmodium falciparum Hsp70-x for potential binding sites and hits
- Authors: Amusengeri, Arnold
- Date: 2017
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59136 , vital:27435
- Description: Restricted access-thesis embargoed for 1 year - release date April 2019
- Full Text:
- Date Issued: 2017
- Authors: Amusengeri, Arnold
- Date: 2017
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59136 , vital:27435
- Description: Restricted access-thesis embargoed for 1 year - release date April 2019
- Full Text:
- Date Issued: 2017
Land, Church, Forced Removals and Community on Klipfontein Farm in the District of Alexandria, Eastern Cape c. 1872 - 1979
- Authors: Bezuidenhout, GJW
- Date: 2017
- Subjects: Janse van Rensburg family , Klipfontein Farm (Alexandria, South Africa) , Alexandria (South Africa) -- History , Colored people (South Africa) -- History , Colored people (South Africa) -- Religion , Colored people (South Africa) -- Relocation , Black people -- Relocation -- South Africa -- Eastern Cape , Family farms -- South Africa -- Eastern Cape , Church history -- South Africa -- Eastern Cape , Land tenure -- Law and legilstion -- South Africa , Land reform -- Law and legislation -- South Africa
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/161315 , vital:40615
- Description: This thesis is a case study of how church, land and dispossession of land has influenced identity formation of a coloured community in the Eastern Province, namely the Klipfontein community. Coloured history in the Eastern Province has largely been neglected. This study attempts to rectify such a lack of in-depth enquiry as it may lead to misinterpretations that may influence contemporary politics and identity formation. Through research based on primary sources, it is evident that the social landscape of Klipfontein Farm and the relationships between that community and surrounding black African and white communities have largely been shaped by the stipulations contained in the joint will of the community’s ancestors: Dirk and Sarah Janse van Rensburg. The land devolved into a trust and has been administered by trustees since the death of the first spouse in 1877. By keeping the land in a trust, it enabled the descendants to continue to live on the farm in perpetuity, without the risk of being forced off the land via financial restraints or racially-based legislation. But the usufructuaries could also never fully utilise Klipfontein as an agricultural concern due to a combination of a lack of equipment and skill, and the provisions of the will. These complications inevitably led to inter-familial disputes and tension. Before 1939 there had already been three court cases dealing with the interpretations of the Will. In that same year the Supreme Court ordered that tracts of the land, including a part of Boesmansriviermond village, be sold in order to pay off arrear rates and taxes. Although the responsibility for these sales lay with the trustees, the community has been suspicious of the usufructuaries ever since. A key element of the Klipfontein identity is their religion. The church legitimises their right to the farm - against those who wish to take that right away. Their claim to occupation is couched in scriptural discourse, viewing Klipfontein as 'their Garden of Eden' that God gave to the stamvader, Dirk Janse van Rensburg. This seemed to have been partially successful for the Klipfontein community in staving off harassment by authorities. It also caused friction between the community and the black African residents. Some usufructuaries and family members felt that such right was exclusively given to the coloured community and so they became increasingly annoyed by the black Africans who settled there. Other usufructuaries did not share this feeling. They allowed evicted black African farm labourers to settle on certain portions of Klipfontein until the late 1970s. The black African population rapidly increased due to misinformation and evictions from neighbouring farms. This only further exacerbated the inter-familial conflict between usufructuaries, flaring tensions between the black Africans and their reluctant hosts as well as animosity from the white community towards Klipfontein. In 1979, after a series of court cases, a decision was made to remove all the African settlers by force and relocate most of them to the ‘homeland’ of Ciskei. The rest, who were of ‘working-age’ were left behind in a ‘temporary emergency camp’ on the outskirts of Kenton-on-Sea. The effects of these removals still impact the relationships between the different racial groups in the area to this day.
- Full Text:
- Date Issued: 2017
- Authors: Bezuidenhout, GJW
- Date: 2017
- Subjects: Janse van Rensburg family , Klipfontein Farm (Alexandria, South Africa) , Alexandria (South Africa) -- History , Colored people (South Africa) -- History , Colored people (South Africa) -- Religion , Colored people (South Africa) -- Relocation , Black people -- Relocation -- South Africa -- Eastern Cape , Family farms -- South Africa -- Eastern Cape , Church history -- South Africa -- Eastern Cape , Land tenure -- Law and legilstion -- South Africa , Land reform -- Law and legislation -- South Africa
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/161315 , vital:40615
- Description: This thesis is a case study of how church, land and dispossession of land has influenced identity formation of a coloured community in the Eastern Province, namely the Klipfontein community. Coloured history in the Eastern Province has largely been neglected. This study attempts to rectify such a lack of in-depth enquiry as it may lead to misinterpretations that may influence contemporary politics and identity formation. Through research based on primary sources, it is evident that the social landscape of Klipfontein Farm and the relationships between that community and surrounding black African and white communities have largely been shaped by the stipulations contained in the joint will of the community’s ancestors: Dirk and Sarah Janse van Rensburg. The land devolved into a trust and has been administered by trustees since the death of the first spouse in 1877. By keeping the land in a trust, it enabled the descendants to continue to live on the farm in perpetuity, without the risk of being forced off the land via financial restraints or racially-based legislation. But the usufructuaries could also never fully utilise Klipfontein as an agricultural concern due to a combination of a lack of equipment and skill, and the provisions of the will. These complications inevitably led to inter-familial disputes and tension. Before 1939 there had already been three court cases dealing with the interpretations of the Will. In that same year the Supreme Court ordered that tracts of the land, including a part of Boesmansriviermond village, be sold in order to pay off arrear rates and taxes. Although the responsibility for these sales lay with the trustees, the community has been suspicious of the usufructuaries ever since. A key element of the Klipfontein identity is their religion. The church legitimises their right to the farm - against those who wish to take that right away. Their claim to occupation is couched in scriptural discourse, viewing Klipfontein as 'their Garden of Eden' that God gave to the stamvader, Dirk Janse van Rensburg. This seemed to have been partially successful for the Klipfontein community in staving off harassment by authorities. It also caused friction between the community and the black African residents. Some usufructuaries and family members felt that such right was exclusively given to the coloured community and so they became increasingly annoyed by the black Africans who settled there. Other usufructuaries did not share this feeling. They allowed evicted black African farm labourers to settle on certain portions of Klipfontein until the late 1970s. The black African population rapidly increased due to misinformation and evictions from neighbouring farms. This only further exacerbated the inter-familial conflict between usufructuaries, flaring tensions between the black Africans and their reluctant hosts as well as animosity from the white community towards Klipfontein. In 1979, after a series of court cases, a decision was made to remove all the African settlers by force and relocate most of them to the ‘homeland’ of Ciskei. The rest, who were of ‘working-age’ were left behind in a ‘temporary emergency camp’ on the outskirts of Kenton-on-Sea. The effects of these removals still impact the relationships between the different racial groups in the area to this day.
- Full Text:
- Date Issued: 2017
Composition portfolio
- Boesack, Lenrick Jonathan Angus
- Authors: Boesack, Lenrick Jonathan Angus
- Date: 2017
- Subjects: Piano music , Prepared piano music , Saxophone music
- Language: English
- Type: text , Thesis , Masters , MMus
- Identifier: http://hdl.handle.net/10962/56233 , vital:26786
- Description: This short composition portfolio comprises 40% of the requirements for the Master of Music Degree in performance and composition at Rhodes University. In addition to the music presented here, I played two public exam recitals of 70 minutes each. While I played piano as a child, my main instrument during my BMUS studies at the University of Cape Town (2004-2007) was the saxophone. In 2010 I was diagnosed with Polymyositis(an auto-immune desease) which particularly affected my breathing and therefore my ability to play the saxophone. For this reason I opted to play my recitals on the piano. The first recital focused on interpretations of Swing Era, Bebop and post-Bebop standards such as: Someday my prince will come, What is this thing called love, In your own sweet way, Eternal Triangle, Recordame, Peace, Dolphin Dance, Caravan and Some other blues. The second recital comprised of seven original compositions that were presented in trio, quartet and quintet settings.
- Full Text:
- Date Issued: 2017
- Authors: Boesack, Lenrick Jonathan Angus
- Date: 2017
- Subjects: Piano music , Prepared piano music , Saxophone music
- Language: English
- Type: text , Thesis , Masters , MMus
- Identifier: http://hdl.handle.net/10962/56233 , vital:26786
- Description: This short composition portfolio comprises 40% of the requirements for the Master of Music Degree in performance and composition at Rhodes University. In addition to the music presented here, I played two public exam recitals of 70 minutes each. While I played piano as a child, my main instrument during my BMUS studies at the University of Cape Town (2004-2007) was the saxophone. In 2010 I was diagnosed with Polymyositis(an auto-immune desease) which particularly affected my breathing and therefore my ability to play the saxophone. For this reason I opted to play my recitals on the piano. The first recital focused on interpretations of Swing Era, Bebop and post-Bebop standards such as: Someday my prince will come, What is this thing called love, In your own sweet way, Eternal Triangle, Recordame, Peace, Dolphin Dance, Caravan and Some other blues. The second recital comprised of seven original compositions that were presented in trio, quartet and quintet settings.
- Full Text:
- Date Issued: 2017
Investigating herbivory and plant origin on tall-statured grasses in South Africa
- Authors: Canavan, Kim
- Date: 2017
- Subjects: Insects as biological pest control agents -- South Africa , Arundo donax , Giant reed -- South Africa , Giant reed -- Biological control -- South Africa , Phragmites australis , Phragmites mauritianus , Phragmites , Tetramesa romana , Biological invasions -- South Africa , Wasps -- Host plants , Wasps -- South Africa
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/6147 , vital:21051
- Description: South African riparian zones have been heavily degraded through anthropogenic activities such as dam construction and extraction of water for irrigation, which has resulted in a loss of ecosystem services and functioning. A consequence of such disturbances to riparian areas is in their susceptibility to invasive alien species (IAS). One such IAS is the giant reed, Arundo donax L. (Poaceae), introduced to South Africa in the 1700s largely for erosion control. Arundo donax has since greatly expanded in the country and is now one of the most abundant IAS. Arundo donax has been found to displace native vegetation and in South Africa this will most likely lead to the displacement of the native tall-statured grasses, Phragmites australis (Cav.) Trin. ex Steud. and Phragmites mauritianus Kunth. This study aimed to enhance our understanding of the tall-statured grasses A. donax, P. australis and P. mauritianus to better manage them in riparian areas. For A. donax, biological control is seen as the most viable option to control stands in the long-term. However, before such a programme is put in place, it is important to first collect baseline data that can be used to guide the direction of the biological control project in South Africa. For the Phragmites spp., despite being a dominant vegetative type in riparian areas, very little is known about their status in South Africa. Furthermore, there have been increasing reports of both Phragmites species having an expansion of their range and abundance. In North America, there has been a similar trend of reed expansion and through molecular work it was determined that a cryptic invasion has occurred with the introduction of an invasive non-native haplotype from Europe. It is therefore unknown if Phragmites spp. populations are expanding due to anthropogenic activities or due to a cryptic invasion. To address these shortfalls in knowledge the study investigated the tall-statured grasses in two parts; firstly, molecular techniques are used to explore the plant origin and genetic diversity of A. donax, P. australis and P. mauritianus and secondly using the Enemy Release Hypothesis as a framework, herbivore assemblages for each reed was determined across their distribution in South Africa. Molecular-techniques determined that both P. australis and P. mauritianus had only one haplotype - known as haplotype K and haplotype V respectively, across their distribution. For P. australis, haplotype K shares a close connection with populations from a Mediterranean lineage and this was further confirmed with a shared grass-waxy band. The direction and timing of genetic exchange between the two regions could not be ascertained and thus still remains unknown. Microsatellite analysis determined that both Phragmites spp. had a high genetic diversity compared to worldwide lineages. With no evidence of any cryptic invasions of haplotypes from other regions, both Phragmites spp. populations are likely to be native to South Africa. For A. donax all populations across South Africa were determined to be haplotype M1; a cosmopolitan haplotype that has an ancient native range in Afghanistan and Pakistan (Indus Valley). Populations were found to have no genetic diversity and thus can be considered one clone. A pre-introductory survey determined a list of herbivores associated with each tall- statured grass. For A. donax, a total of seven herbivores were found. Of these, one herbivore, a galling wasp, Tetramesa romana Walker (Hymenoptera: Eurytomidae) was found to be highly abundant and widely distributed in South Africa. Tetramesa romana is already a biological control agent in North America and thus is likely exerting some pressure on A. donax populations in South Africa. For both Phragmites spp. a total of ten herbivores were found, although having higher species richness compared to A. donax, when compared to other regions, these native species have a relatively low species richness. Providing baseline data on plant origin, genetic diversity and herbivory on A. donax, P. australis and P. mauritianus has provided important information on managing these species in riparian ecosystems in South Africa. For the Phragmites spp. with no evidence of any cryptic invasions, it is recommended that reed stands continue to be managed as native species. Phragmites spp. are important dominant vegetative species and thus should be protected; however, if reed stands become expansive, control methods can be put in place to focus on managing spread and abundance. For A. donax, this study was able to provide pivotal information in guiding the biological control programme. By determining the ancient lineage of South African populations, research can be focused in this area to find potential biological control agents. Lastly, the pre-introductory survey determined that a biological control agent, T. romana was already established with an unknown introduction and also highlighted potential plant parts that should be targeted. In particular, no rhizome feeding herbivores were found in South Africa and therefore this highlights an important niche that should be explored in biological control agents.
- Full Text:
- Date Issued: 2017
- Authors: Canavan, Kim
- Date: 2017
- Subjects: Insects as biological pest control agents -- South Africa , Arundo donax , Giant reed -- South Africa , Giant reed -- Biological control -- South Africa , Phragmites australis , Phragmites mauritianus , Phragmites , Tetramesa romana , Biological invasions -- South Africa , Wasps -- Host plants , Wasps -- South Africa
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/6147 , vital:21051
- Description: South African riparian zones have been heavily degraded through anthropogenic activities such as dam construction and extraction of water for irrigation, which has resulted in a loss of ecosystem services and functioning. A consequence of such disturbances to riparian areas is in their susceptibility to invasive alien species (IAS). One such IAS is the giant reed, Arundo donax L. (Poaceae), introduced to South Africa in the 1700s largely for erosion control. Arundo donax has since greatly expanded in the country and is now one of the most abundant IAS. Arundo donax has been found to displace native vegetation and in South Africa this will most likely lead to the displacement of the native tall-statured grasses, Phragmites australis (Cav.) Trin. ex Steud. and Phragmites mauritianus Kunth. This study aimed to enhance our understanding of the tall-statured grasses A. donax, P. australis and P. mauritianus to better manage them in riparian areas. For A. donax, biological control is seen as the most viable option to control stands in the long-term. However, before such a programme is put in place, it is important to first collect baseline data that can be used to guide the direction of the biological control project in South Africa. For the Phragmites spp., despite being a dominant vegetative type in riparian areas, very little is known about their status in South Africa. Furthermore, there have been increasing reports of both Phragmites species having an expansion of their range and abundance. In North America, there has been a similar trend of reed expansion and through molecular work it was determined that a cryptic invasion has occurred with the introduction of an invasive non-native haplotype from Europe. It is therefore unknown if Phragmites spp. populations are expanding due to anthropogenic activities or due to a cryptic invasion. To address these shortfalls in knowledge the study investigated the tall-statured grasses in two parts; firstly, molecular techniques are used to explore the plant origin and genetic diversity of A. donax, P. australis and P. mauritianus and secondly using the Enemy Release Hypothesis as a framework, herbivore assemblages for each reed was determined across their distribution in South Africa. Molecular-techniques determined that both P. australis and P. mauritianus had only one haplotype - known as haplotype K and haplotype V respectively, across their distribution. For P. australis, haplotype K shares a close connection with populations from a Mediterranean lineage and this was further confirmed with a shared grass-waxy band. The direction and timing of genetic exchange between the two regions could not be ascertained and thus still remains unknown. Microsatellite analysis determined that both Phragmites spp. had a high genetic diversity compared to worldwide lineages. With no evidence of any cryptic invasions of haplotypes from other regions, both Phragmites spp. populations are likely to be native to South Africa. For A. donax all populations across South Africa were determined to be haplotype M1; a cosmopolitan haplotype that has an ancient native range in Afghanistan and Pakistan (Indus Valley). Populations were found to have no genetic diversity and thus can be considered one clone. A pre-introductory survey determined a list of herbivores associated with each tall- statured grass. For A. donax, a total of seven herbivores were found. Of these, one herbivore, a galling wasp, Tetramesa romana Walker (Hymenoptera: Eurytomidae) was found to be highly abundant and widely distributed in South Africa. Tetramesa romana is already a biological control agent in North America and thus is likely exerting some pressure on A. donax populations in South Africa. For both Phragmites spp. a total of ten herbivores were found, although having higher species richness compared to A. donax, when compared to other regions, these native species have a relatively low species richness. Providing baseline data on plant origin, genetic diversity and herbivory on A. donax, P. australis and P. mauritianus has provided important information on managing these species in riparian ecosystems in South Africa. For the Phragmites spp. with no evidence of any cryptic invasions, it is recommended that reed stands continue to be managed as native species. Phragmites spp. are important dominant vegetative species and thus should be protected; however, if reed stands become expansive, control methods can be put in place to focus on managing spread and abundance. For A. donax, this study was able to provide pivotal information in guiding the biological control programme. By determining the ancient lineage of South African populations, research can be focused in this area to find potential biological control agents. Lastly, the pre-introductory survey determined that a biological control agent, T. romana was already established with an unknown introduction and also highlighted potential plant parts that should be targeted. In particular, no rhizome feeding herbivores were found in South Africa and therefore this highlights an important niche that should be explored in biological control agents.
- Full Text:
- Date Issued: 2017
Composition portfolio
- Authors: Caplan, Anthony
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MMus
- Identifier: http://hdl.handle.net/10962/6940 , vital:21202
- Description: Restricted access-thesis available at the Music Library
- Full Text: false
- Date Issued: 2017
- Authors: Caplan, Anthony
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MMus
- Identifier: http://hdl.handle.net/10962/6940 , vital:21202
- Description: Restricted access-thesis available at the Music Library
- Full Text: false
- Date Issued: 2017
Preparation and evaluation of captopril - ion exchange resin complexes
- Chikukwa, Mellisa Tafadzwa Ruramai
- Authors: Chikukwa, Mellisa Tafadzwa Ruramai
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59146 , vital:27441
- Description: Restricted access-thesis embargoed for 2 years
- Full Text:
- Date Issued: 2017
- Authors: Chikukwa, Mellisa Tafadzwa Ruramai
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59146 , vital:27441
- Description: Restricted access-thesis embargoed for 2 years
- Full Text:
- Date Issued: 2017
Chinese aid and African agency since 2000: examining the cases of Zimbabwe, Angola and Ghana
- Authors: Chipaike, Ronald
- Date: 2017
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/59151 , vital:27442
- Description: Restricted access-thesis embargoed for 2 years
- Full Text:
- Date Issued: 2017
- Authors: Chipaike, Ronald
- Date: 2017
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/59151 , vital:27442
- Description: Restricted access-thesis embargoed for 2 years
- Full Text:
- Date Issued: 2017
Microbial water quality monitoring of raw and treated water sources in Harare and the effect of gender in disaster management due to water related disasters
- Authors: Chirenda, Tatenda Grace
- Date: 2017
- Subjects: Drinking water Microbiology Zimbabwe Harare , Heterotrophic bacteria Zimbabwe Harare , Emergency management Zimbabwe Harare , Disasters Social aspects Zimbabwe Harare , Water quality management Zimbabwe Harare , Public health Zimbabwe Harare , Sex role Zimbabwe Harare
- Language: English
- Type: text , Thesis , Masters , MPharm
- Identifier: http://hdl.handle.net/10962/59156 , vital:27444
- Description: Background - Microbial water quality monitoring is essential to the provision of potable water for domestic use. Unsafe water sources increase the risk of waterborne diseases. There is a need to raise awareness of legislature that supports management of water related disasters. Gender, education, health, and economic vulnerability contribute to the success of disaster management. Aim - This study aimed to investigate the microbial water quality of treated water in the Harare area. The study also researched the microbial water quality monitoring practices in Zimbabwe and how these contribute to the management of water borne diseases. The impact of gender, marriage, education, and disease in disaster management practices in Zimbabwe and South Africa was analysed. Method - Literature review was conducted on microbial water quality monitoring practices in Zimbabwe and legislature that supports disaster management. Practices of disaster management in Zimbabwe, and South Africa were investigated and compared. The perspective of the Harare community on the quality of their potable water was investigated through the use of a questionnaire and water quality testing was conducted using hydrogen sulphide test and R2A based heterotrophic plate count. Raw water supplying Manyame River and tap water in Harare households were assessed for microbial quality. Results and Discussion - Raw water sources were found to be contaminated by faecal matter. Household water sources had no faecal contamination, but tested positive for heterotrophic bacteria. The CFU/ml quantities obtained ranged from 1- 452 CFU/ml for all samples. The WHO guidelines for domestic water sources recommend that domestic water should have no coliforms/100 ml sample. Disaster management protocols were available in disaster prone areas such as the Matabeleland South Province. No guidelines were in place for monitoring microbial water quality as a disaster prevention method. Conclusion - The current state of treated water supplied by the Morton Jaffray Treatment Plant was found to be suitable for domestic use, but not sufficient to meet the Harare population’s needs. The need to push for legislature supporting microbial water quality monitoring was recognised. Initiating public / private partnerships in water distribution and water quality monitoring in Zimbabwe was encouraged.
- Full Text:
- Date Issued: 2017
- Authors: Chirenda, Tatenda Grace
- Date: 2017
- Subjects: Drinking water Microbiology Zimbabwe Harare , Heterotrophic bacteria Zimbabwe Harare , Emergency management Zimbabwe Harare , Disasters Social aspects Zimbabwe Harare , Water quality management Zimbabwe Harare , Public health Zimbabwe Harare , Sex role Zimbabwe Harare
- Language: English
- Type: text , Thesis , Masters , MPharm
- Identifier: http://hdl.handle.net/10962/59156 , vital:27444
- Description: Background - Microbial water quality monitoring is essential to the provision of potable water for domestic use. Unsafe water sources increase the risk of waterborne diseases. There is a need to raise awareness of legislature that supports management of water related disasters. Gender, education, health, and economic vulnerability contribute to the success of disaster management. Aim - This study aimed to investigate the microbial water quality of treated water in the Harare area. The study also researched the microbial water quality monitoring practices in Zimbabwe and how these contribute to the management of water borne diseases. The impact of gender, marriage, education, and disease in disaster management practices in Zimbabwe and South Africa was analysed. Method - Literature review was conducted on microbial water quality monitoring practices in Zimbabwe and legislature that supports disaster management. Practices of disaster management in Zimbabwe, and South Africa were investigated and compared. The perspective of the Harare community on the quality of their potable water was investigated through the use of a questionnaire and water quality testing was conducted using hydrogen sulphide test and R2A based heterotrophic plate count. Raw water supplying Manyame River and tap water in Harare households were assessed for microbial quality. Results and Discussion - Raw water sources were found to be contaminated by faecal matter. Household water sources had no faecal contamination, but tested positive for heterotrophic bacteria. The CFU/ml quantities obtained ranged from 1- 452 CFU/ml for all samples. The WHO guidelines for domestic water sources recommend that domestic water should have no coliforms/100 ml sample. Disaster management protocols were available in disaster prone areas such as the Matabeleland South Province. No guidelines were in place for monitoring microbial water quality as a disaster prevention method. Conclusion - The current state of treated water supplied by the Morton Jaffray Treatment Plant was found to be suitable for domestic use, but not sufficient to meet the Harare population’s needs. The need to push for legislature supporting microbial water quality monitoring was recognised. Initiating public / private partnerships in water distribution and water quality monitoring in Zimbabwe was encouraged.
- Full Text:
- Date Issued: 2017
Evaluation of the acceptability of ambulatory blood pressure monitoring in a semi-rural, Eastern Cape population
- Authors: Chiwanza, Farisai
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MPharm
- Identifier: http://hdl.handle.net/10962/59161 , vital:27447
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2017
- Authors: Chiwanza, Farisai
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MPharm
- Identifier: http://hdl.handle.net/10962/59161 , vital:27447
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2017
Systematics and biogeography of forest snails, chondrocyclus (mollusca: gastropoda: caenogastropoda: cyclophoridae) in Southern Africa
- Authors: Cole, Mary Louise
- Date: 2017
- Subjects: Chondrocyclus , Mollusks -- South Africa , Cyclophoridae -- South Africa
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/4356 , vital:20651
- Description: This study presents a molecular phylogeny and systematic revision of Chondrocyclus, the major South African group of the large family of operculate terrestrial molluscs, the Cyclophoridae. Chondrocyclus snails are small gastropods found in forest and moist thicket throughout South Africa. This is the first detailed systematic treatment of a group of Cyclophoridae in mainland Africa and the first to provide molecular data. This study complements regional studies on the systematics of the family in Asia and provides comparative data for studies of higher level relationships within the Cyclophoridae. Phylogenetic reconstruction by BI and ML methods of combined and single gene datasets of 16S and CO 1 all showed Chondrocyclus to be monophyletic and recovered five well-supported clades that corresponded to groups of populations identifiable on the basis of combinations of morphological characters. Species were diagnosed morphologically and were shown to be genetically distinct lineages. Informative morphological features include shell dimensions, protoconch, periostracum, operculum, radula and penis. Two species in Afromontane regions of Zimbabwe and Malawi respectively are excluded from Chondrocyclus based on morphology and tentatively placed in Cyathopoma. Diversity recognised within the genus more than doubled, from a previous seven South African species to seventeen. Re-descriptions of established species and descriptions of new species are provided, together with photographs of morphological characteristics. New taxon names and nomenclatural acts within it are disclaimed and are therefore not available in the sense of the International Code of Zoological Nomenclature until validly published elsewhere. Several cryptic species within previously widespread “species” and unrecorded narrowly endemic species were documented. The clade consisting of populations of “Chondrocyclus isipingoensis”, now considered to be a species complex, was sister to a group containing the other four clades. The “Isipingoensis” clade occurs widely in Afromontane regions, along the Great Escarpment, and on the south-east coast. The other four clades occur from Zululand to the Cape Peninsula with a pattern of east-west lineage turnover. The biogeography of Chondrocyclus is interpreted by comparison with concordant patterns in other terrestrial molluscs and unrelated taxa with poor dispersal ability. This study complements other research on composition, spatial distribution and phylogenetic diversity of low-vagility invertebrates and expands the data available for biodiversity conservation in South Africa.
- Full Text:
- Date Issued: 2017
- Authors: Cole, Mary Louise
- Date: 2017
- Subjects: Chondrocyclus , Mollusks -- South Africa , Cyclophoridae -- South Africa
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/4356 , vital:20651
- Description: This study presents a molecular phylogeny and systematic revision of Chondrocyclus, the major South African group of the large family of operculate terrestrial molluscs, the Cyclophoridae. Chondrocyclus snails are small gastropods found in forest and moist thicket throughout South Africa. This is the first detailed systematic treatment of a group of Cyclophoridae in mainland Africa and the first to provide molecular data. This study complements regional studies on the systematics of the family in Asia and provides comparative data for studies of higher level relationships within the Cyclophoridae. Phylogenetic reconstruction by BI and ML methods of combined and single gene datasets of 16S and CO 1 all showed Chondrocyclus to be monophyletic and recovered five well-supported clades that corresponded to groups of populations identifiable on the basis of combinations of morphological characters. Species were diagnosed morphologically and were shown to be genetically distinct lineages. Informative morphological features include shell dimensions, protoconch, periostracum, operculum, radula and penis. Two species in Afromontane regions of Zimbabwe and Malawi respectively are excluded from Chondrocyclus based on morphology and tentatively placed in Cyathopoma. Diversity recognised within the genus more than doubled, from a previous seven South African species to seventeen. Re-descriptions of established species and descriptions of new species are provided, together with photographs of morphological characteristics. New taxon names and nomenclatural acts within it are disclaimed and are therefore not available in the sense of the International Code of Zoological Nomenclature until validly published elsewhere. Several cryptic species within previously widespread “species” and unrecorded narrowly endemic species were documented. The clade consisting of populations of “Chondrocyclus isipingoensis”, now considered to be a species complex, was sister to a group containing the other four clades. The “Isipingoensis” clade occurs widely in Afromontane regions, along the Great Escarpment, and on the south-east coast. The other four clades occur from Zululand to the Cape Peninsula with a pattern of east-west lineage turnover. The biogeography of Chondrocyclus is interpreted by comparison with concordant patterns in other terrestrial molluscs and unrelated taxa with poor dispersal ability. This study complements other research on composition, spatial distribution and phylogenetic diversity of low-vagility invertebrates and expands the data available for biodiversity conservation in South Africa.
- Full Text:
- Date Issued: 2017
Improving the cold tolerance of false codling moth, thaumatotibia leucotreta, for better performance in a sterile insect release programme
- Authors: Daniel, Claire Ashleigh
- Date: 2017
- Subjects: Cryptophlebia leucotreta -- South Africa , Cryptophlebia leucotreta -- Reproduction -- Effect of temperature on , Cryptophlebia leucotreta -- Biological control -- South Africa , Citrus -- Diseases and pests -- Biological control -- South Africa , Insect pests -- Biological control -- South Africa , Insecticides , Citrus fruit industry -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/5271 , vital:20803
- Description: The false codling moth (FCM), Thaumatotibia leucotreta (Meyrick) (Lepidoptera: Tortricidae) is a major pest of citrus and other important crops in Sub-Saharan Africa. The introduction of a sterile insect technique (SIT) programme for FCM in South Africa has proven to be very effective in the control of FCM. The objective was to flood citrus orchards with large numbers of sterile males resulting in a ratio of at least 10 sterile to 1 wild moth, increasing the probability of a female moth mating with a sterile male. This target is often achieved and the programme is generally successful, however there are some challenges regarding this programme. The mass rearing environment, artificial diet, handling methods and irradiation have an impact on sterile insect quality as environmental differences between the rearing facility and field, influences the insect phenotype and competitiveness. This is evident as wild male moths can theoretically actively fly at a temperature of 12°C and laboratory-reared sterilized moths, due to the radiation treatment, appear unable to fly below 20°C. As a consequence, sterile males are out-competed by wild males during the cooler months of the year. This is detrimental to the SIT programme as FCM do not undergo diapause, meaning they are active during winter and will still reproduce. Therefore, to maximize the effect of the SIT programme, it is vital to increase the flight ability of mass reared sterile males at lower temperatures. Various studies have shown that by adding cryoprotectants to the basic laboratory diets increases the cold tolerance of certain insects and thus may allow them to be mobile at lower temperatures, however it imperative that any chemical used to augment the commercial diet of the insect has no negative effects on the insect physiology and development. To investigate this detail for FCM, five generations of FCM were reared on diets augmented with various known insect cryoprotectants. These augmented FCM were subsequently used in experiments designed to determine firstly, if the cryoprotectants had a positive result on the cold tolerance of the FCM, and secondly, if they had any adverse effects on other physiological aspects such as duration of development. Laboratory trials indicated that the flight ability of male FCM was improved when larvae were reared on diets augmented with trehalose and cholesterol (with an average of 40 % of cholesterol and trehalose augmented males that flew at 15 °C where 0 % of the control flew). Results obtained during the field trials support the laboratory results as there was a significant increase in the number of trehalose augmented moths caught in the field during March and July (winter). Results also showed potential for cholesterol to be used as an additive. Other important findings show that both cholesterol and trehalose have no negative impacts on developmental rate, pupal size, and egg production and viability. Trehalose was found to increase the pupal mass of male and female FCM, as well as the number of eggs laid per female. Cholesterol was found to increase developmental rate and the number of eggs laid. The main findings of this study were that diet additives could improve the massrearing of FCM for SIT and the competitiveness of the males, especially at lower temperatures. However, the additives were expensive and cost could well be a constraint to the wide scale implementation of the new technology.
- Full Text:
- Date Issued: 2017
- Authors: Daniel, Claire Ashleigh
- Date: 2017
- Subjects: Cryptophlebia leucotreta -- South Africa , Cryptophlebia leucotreta -- Reproduction -- Effect of temperature on , Cryptophlebia leucotreta -- Biological control -- South Africa , Citrus -- Diseases and pests -- Biological control -- South Africa , Insect pests -- Biological control -- South Africa , Insecticides , Citrus fruit industry -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/5271 , vital:20803
- Description: The false codling moth (FCM), Thaumatotibia leucotreta (Meyrick) (Lepidoptera: Tortricidae) is a major pest of citrus and other important crops in Sub-Saharan Africa. The introduction of a sterile insect technique (SIT) programme for FCM in South Africa has proven to be very effective in the control of FCM. The objective was to flood citrus orchards with large numbers of sterile males resulting in a ratio of at least 10 sterile to 1 wild moth, increasing the probability of a female moth mating with a sterile male. This target is often achieved and the programme is generally successful, however there are some challenges regarding this programme. The mass rearing environment, artificial diet, handling methods and irradiation have an impact on sterile insect quality as environmental differences between the rearing facility and field, influences the insect phenotype and competitiveness. This is evident as wild male moths can theoretically actively fly at a temperature of 12°C and laboratory-reared sterilized moths, due to the radiation treatment, appear unable to fly below 20°C. As a consequence, sterile males are out-competed by wild males during the cooler months of the year. This is detrimental to the SIT programme as FCM do not undergo diapause, meaning they are active during winter and will still reproduce. Therefore, to maximize the effect of the SIT programme, it is vital to increase the flight ability of mass reared sterile males at lower temperatures. Various studies have shown that by adding cryoprotectants to the basic laboratory diets increases the cold tolerance of certain insects and thus may allow them to be mobile at lower temperatures, however it imperative that any chemical used to augment the commercial diet of the insect has no negative effects on the insect physiology and development. To investigate this detail for FCM, five generations of FCM were reared on diets augmented with various known insect cryoprotectants. These augmented FCM were subsequently used in experiments designed to determine firstly, if the cryoprotectants had a positive result on the cold tolerance of the FCM, and secondly, if they had any adverse effects on other physiological aspects such as duration of development. Laboratory trials indicated that the flight ability of male FCM was improved when larvae were reared on diets augmented with trehalose and cholesterol (with an average of 40 % of cholesterol and trehalose augmented males that flew at 15 °C where 0 % of the control flew). Results obtained during the field trials support the laboratory results as there was a significant increase in the number of trehalose augmented moths caught in the field during March and July (winter). Results also showed potential for cholesterol to be used as an additive. Other important findings show that both cholesterol and trehalose have no negative impacts on developmental rate, pupal size, and egg production and viability. Trehalose was found to increase the pupal mass of male and female FCM, as well as the number of eggs laid per female. Cholesterol was found to increase developmental rate and the number of eggs laid. The main findings of this study were that diet additives could improve the massrearing of FCM for SIT and the competitiveness of the males, especially at lower temperatures. However, the additives were expensive and cost could well be a constraint to the wide scale implementation of the new technology.
- Full Text:
- Date Issued: 2017
Identification of SNPs within the CYP2A6 enzyme of TNBC cell lines and the resulting change in activity
- Dingle, Laura Margaret Kirkpatrick
- Authors: Dingle, Laura Margaret Kirkpatrick
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/64349 , vital:28536
- Description: Expected release date-May 2019
- Full Text:
- Date Issued: 2017
- Authors: Dingle, Laura Margaret Kirkpatrick
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/64349 , vital:28536
- Description: Expected release date-May 2019
- Full Text:
- Date Issued: 2017
Sorptive and microbial properties of low-cost adsorbents used in the extraction of ciprofloxacin and isoniazid from aqueous solution
- Authors: Dube, Cyril Simbarashe
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSC
- Identifier: http://hdl.handle.net/10962/59178 , vital:27450
- Description: This work describes how coal fly ash (FA), kaolinite, perlite, talc and vermiculite were used to remove ciprofloxacin and isoniazid from aqueous solutions. The adsorptive features of the adsorbents were evaluated for ciprofloxacin and isoniazid with regards to the effects of contact time, pH, solid/liquid ratio and antibiotic concentration. All adsorbents were sterilised by dry heat before use to avoid the proliferation of antimicrobial resistance by the bacteria present on the adsorbents during experiments. The regression correlation coefficients indicate that the linearised form of the Langmuir isotherm gives the best fit for the sorption of both antibiotics onto FA and talc, ciprofloxacin onto kaolinite, and isoniazid onto perlite and vermiculite with R2 values ranging from 0.908 - 0.999. The linearised form of the Freundlich isotherm best describes the sorption of ciprofloxacin onto vermiculite and isoniazid onto kaolinite with R2 values of 0.999 for both. The linearised form of the Temkin isotherm best describes the sorption of ciprofloxacin onto perlite with an R2 = 0.997. The values of the Freundlich exponent, 1/n, range from 0.221 - 0.998, indicating a favourable adsorption of ciprofloxacin and isoniazid onto the adsorbents. The heat of sorption, B, calculated from the Temkin plots has values ranging from 0.018 - 10.460 J/mol, indicating a physical adsorption process (physisorption). Adsorption equilibrium on all adsorbents was achieved after 30 min for both antibiotics and the kinetic data obtained conforms best to the pseudo-second order equation with R2 values ranging from 0.998 - 0.999. The removal of ciprofloxacin and isoniazid by all adsorbents except FA was strongly influenced by the pH suggesting that electrostatic interactions play a major role in the adsorption processes. All adsorbents except FA removed showed excellent adsorption of ciprofloxacin from aqueous solutions with all of them achieving removals ranging from 80 - 99%. The adsorbents were less efficient in removing isoniazid and kaolinite gave the highest removal of 55 %. Furthermore, the microbial quality of the adsorbents was investigated and the results revealed that kaolinite, talc, perlite and vermiculite were heavily contaminated with microorganisms. FA was sterile. The fungi isolated from the mineral adsorbents were in concentrations ranging from 2.13 x 106 to 1.25 x 107 CFU/g and were mostly moulds; Penicillium spp., Aspergillus niger, Aspergillus fumigatus, Aspergillus flavus, Cladosporium spp. and Rhizopus oryzae. One yeast was isolated and was identified as Candida albicans. The bacteria identified were in concentrations ranging from 4.96 x 106 - 1.19 x 109 CFU/g. E. coli, Enterobacter cloacae, Exiguobacterium spp., Pseudomonas aeruginosa, Bacillus spp. and Serratia liquefaciens. The leachability index (LI) values obtained for adsorbents indicated that it is highly unlikely that microorganisms could be leached out of the adsorbents by rain. Heat inactivation of the microorganisms at a 105 °C was totally unsuccessful. However, it was established that a dry heat dose of 160 °C for at least 15 min was sufficient to eradicate all microorganisms present in the adsorbents. The D-values for coliform bacteria from all samples were very similar ranging from 1.7-2.2 min indicating homogeneity in heat resistance by the microorganisms. The Pseudomonas aureginosa isolated had a D-value of 2.2 min. The fungi isolated from the samples had D-values ranging from 2.1-3.2 min.
- Full Text:
- Date Issued: 2017
- Authors: Dube, Cyril Simbarashe
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSC
- Identifier: http://hdl.handle.net/10962/59178 , vital:27450
- Description: This work describes how coal fly ash (FA), kaolinite, perlite, talc and vermiculite were used to remove ciprofloxacin and isoniazid from aqueous solutions. The adsorptive features of the adsorbents were evaluated for ciprofloxacin and isoniazid with regards to the effects of contact time, pH, solid/liquid ratio and antibiotic concentration. All adsorbents were sterilised by dry heat before use to avoid the proliferation of antimicrobial resistance by the bacteria present on the adsorbents during experiments. The regression correlation coefficients indicate that the linearised form of the Langmuir isotherm gives the best fit for the sorption of both antibiotics onto FA and talc, ciprofloxacin onto kaolinite, and isoniazid onto perlite and vermiculite with R2 values ranging from 0.908 - 0.999. The linearised form of the Freundlich isotherm best describes the sorption of ciprofloxacin onto vermiculite and isoniazid onto kaolinite with R2 values of 0.999 for both. The linearised form of the Temkin isotherm best describes the sorption of ciprofloxacin onto perlite with an R2 = 0.997. The values of the Freundlich exponent, 1/n, range from 0.221 - 0.998, indicating a favourable adsorption of ciprofloxacin and isoniazid onto the adsorbents. The heat of sorption, B, calculated from the Temkin plots has values ranging from 0.018 - 10.460 J/mol, indicating a physical adsorption process (physisorption). Adsorption equilibrium on all adsorbents was achieved after 30 min for both antibiotics and the kinetic data obtained conforms best to the pseudo-second order equation with R2 values ranging from 0.998 - 0.999. The removal of ciprofloxacin and isoniazid by all adsorbents except FA was strongly influenced by the pH suggesting that electrostatic interactions play a major role in the adsorption processes. All adsorbents except FA removed showed excellent adsorption of ciprofloxacin from aqueous solutions with all of them achieving removals ranging from 80 - 99%. The adsorbents were less efficient in removing isoniazid and kaolinite gave the highest removal of 55 %. Furthermore, the microbial quality of the adsorbents was investigated and the results revealed that kaolinite, talc, perlite and vermiculite were heavily contaminated with microorganisms. FA was sterile. The fungi isolated from the mineral adsorbents were in concentrations ranging from 2.13 x 106 to 1.25 x 107 CFU/g and were mostly moulds; Penicillium spp., Aspergillus niger, Aspergillus fumigatus, Aspergillus flavus, Cladosporium spp. and Rhizopus oryzae. One yeast was isolated and was identified as Candida albicans. The bacteria identified were in concentrations ranging from 4.96 x 106 - 1.19 x 109 CFU/g. E. coli, Enterobacter cloacae, Exiguobacterium spp., Pseudomonas aeruginosa, Bacillus spp. and Serratia liquefaciens. The leachability index (LI) values obtained for adsorbents indicated that it is highly unlikely that microorganisms could be leached out of the adsorbents by rain. Heat inactivation of the microorganisms at a 105 °C was totally unsuccessful. However, it was established that a dry heat dose of 160 °C for at least 15 min was sufficient to eradicate all microorganisms present in the adsorbents. The D-values for coliform bacteria from all samples were very similar ranging from 1.7-2.2 min indicating homogeneity in heat resistance by the microorganisms. The Pseudomonas aureginosa isolated had a D-value of 2.2 min. The fungi isolated from the samples had D-values ranging from 2.1-3.2 min.
- Full Text:
- Date Issued: 2017
Density-dependent effects on body size, Philopatry, and dispersal in the Damaraland mole-rat (Fukomys damarensis)
- Authors: Finn, Kyle T
- Date: 2017
- Subjects: Fukomys damarensis , Fukomys damarensis -- Reproduction , Fukomys damarensis -- Growth , Rodents -- Reproduction -- South Africa -- Northern Cape , Rodents -- Growth -- South Africa -- Northern Cape , Rodent populations -- South Africa -- Northern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/50495 , vital:25993
- Description: Population density may exert changes in a variety of behavioural and physiological characters in animals. However, the effects of density-dependence and dispersal are poorly studied in subterranean rodents due to the difficulties involved in observing such effects in wild populations. Using the cooperative breeding Damaraland mole-rat (Fukomys damarensis) as a model species, the effects of population density on body size, growth rates, group size, recruitment, philopatry and dispersal were investigated at two sites (one with low density and one with high density) in the Northern Cape of South Africa. Group size, litter size and the probability of recapture were independent of population density. However, individual body size, recruitment, dispersal rate and dispersal distance were density-dependent. Individuals were significantly larger, juveniles exhibited a significantly higher growth rate, and juvenile recruitment was significantly greater when population density was low. At higher densities, significantly more individuals were lost between capture events which may be indicative of increased rates of dispersal. Mean dispersal distances in mole-rats were reduced at higher densities and increased at lower densities. While both sexes dispersed equally, males were significantly more likely to join an established colony and females created new burrow systems. In addition, four times as many single females were found when population density was low. The apparent differences in the study populations may be attributed to variable annual rainfall or food availability. The greater annual rainfall at the high-density site may provide better habitat conditions and therefore result in an increase in the population density and an increased dispersal rate due to the relaxed ecological constraints such as reduced energetic costs to burrowing. However, the larger body size found at the low-density site may indicate that the available food at that location is of better quality. This study revealed that mole-rats were able to disperse over 1km and therefore a much larger study area would be required in capture-mark-recapture studies to ensure the recapture of the majority of dispersers. Lastly, a surprising find of this study was that females may survive a solitary existence for over two years while awaiting the arrival of a mate.
- Full Text:
- Date Issued: 2017
- Authors: Finn, Kyle T
- Date: 2017
- Subjects: Fukomys damarensis , Fukomys damarensis -- Reproduction , Fukomys damarensis -- Growth , Rodents -- Reproduction -- South Africa -- Northern Cape , Rodents -- Growth -- South Africa -- Northern Cape , Rodent populations -- South Africa -- Northern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/50495 , vital:25993
- Description: Population density may exert changes in a variety of behavioural and physiological characters in animals. However, the effects of density-dependence and dispersal are poorly studied in subterranean rodents due to the difficulties involved in observing such effects in wild populations. Using the cooperative breeding Damaraland mole-rat (Fukomys damarensis) as a model species, the effects of population density on body size, growth rates, group size, recruitment, philopatry and dispersal were investigated at two sites (one with low density and one with high density) in the Northern Cape of South Africa. Group size, litter size and the probability of recapture were independent of population density. However, individual body size, recruitment, dispersal rate and dispersal distance were density-dependent. Individuals were significantly larger, juveniles exhibited a significantly higher growth rate, and juvenile recruitment was significantly greater when population density was low. At higher densities, significantly more individuals were lost between capture events which may be indicative of increased rates of dispersal. Mean dispersal distances in mole-rats were reduced at higher densities and increased at lower densities. While both sexes dispersed equally, males were significantly more likely to join an established colony and females created new burrow systems. In addition, four times as many single females were found when population density was low. The apparent differences in the study populations may be attributed to variable annual rainfall or food availability. The greater annual rainfall at the high-density site may provide better habitat conditions and therefore result in an increase in the population density and an increased dispersal rate due to the relaxed ecological constraints such as reduced energetic costs to burrowing. However, the larger body size found at the low-density site may indicate that the available food at that location is of better quality. This study revealed that mole-rats were able to disperse over 1km and therefore a much larger study area would be required in capture-mark-recapture studies to ensure the recapture of the majority of dispersers. Lastly, a surprising find of this study was that females may survive a solitary existence for over two years while awaiting the arrival of a mate.
- Full Text:
- Date Issued: 2017
The ecological impacts of pollution on a river ecosystem: a community index and stable isotope approach
- Authors: Gininda, Simphiwe Linah
- Date: 2017
- Subjects: Water -- Pollution -- Bloukrans River , Water quality -- South Africa -- Makhanda , Stream ecology -- South Africa -- Makhanda , South African Scoring System , Sewage disposal in rivers, lakes, etc. -- South Africa -- Makhanda , Agricultural ecology -- South Africa -- Makhanda , Agricultural pollution -- South Africa -- Makhanda
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/7993 , vital:21331
- Description: For decades, urbanized rivers have been modified to meet the needs of constantly expanding human populations in many countries around the world. The Bloukrans River in Grahamstown is one of the polluted and structurally modified urban rivers in South Africa, and there is no published information regarding its water quality and ecological status. Water quality is threatened by human activities including the disposal of treated and raw sewage, livestock farming, and agriculture. This study was conducted to determine the ecological status of the river by assessing its biological, chemical, and physical components in relation to man-mediated activities. Biological responses of macroinvertebrates were used to assess changes in water quality through space and time based on the South African Scoring System version 5 and the Average Score per Taxon water quality indices. The results showed poor water quality due to high nitrate and ammonium concentrations derived from sewage, and channel modifications by agricultural activities and dumping of solid waste. Channel width, water depth, dissolved oxygen, nitrate, and ammonium concentrations were the main drivers of macroinvertebrate distribution patterns and had the most influence on the variability in macroinvertebrates taxa richness, diversity and abundance. Diatoms were also used to assess water quality, specifically to indicate the trophic status of the river based on changes in the Trophic Diatom Index. The results suggested that the Bloukrans River was eutrophic during the course of this study. However, the trophic status varied with freshwater input, resulting in mesotrophic conditions during flooding and eutrophication in dry seasons. Changes in pH, phosphate concentration, water velocity (current speed), and temperature influenced the distribution of diatoms in the Bloukrans River. However, only pH was important at the community level and significantly influenced diatom abundances. Stable nitrogen isotope ratios (S15N) of autotrophs and primary and secondary consumers revealed noticeable differences between tissues of organisms exposed to treated sewage and those without any exposure. The S15N values in biota occurring above the sewage treatment discharge point were low, and those collected below the sewage point were higher. Although fertilizer derived nitrogen is generally depleted in 15N, agriculture-derived nitrogen could not be excluded as a possible source since animals at the sample site that was most affected by agricultural activities had the highest S15N values. This study provided valuable information on the ecological status of the Bloukrans River and identified the major activities associated with reduced biodiversity and water quality.
- Full Text:
- Date Issued: 2017
- Authors: Gininda, Simphiwe Linah
- Date: 2017
- Subjects: Water -- Pollution -- Bloukrans River , Water quality -- South Africa -- Makhanda , Stream ecology -- South Africa -- Makhanda , South African Scoring System , Sewage disposal in rivers, lakes, etc. -- South Africa -- Makhanda , Agricultural ecology -- South Africa -- Makhanda , Agricultural pollution -- South Africa -- Makhanda
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/7993 , vital:21331
- Description: For decades, urbanized rivers have been modified to meet the needs of constantly expanding human populations in many countries around the world. The Bloukrans River in Grahamstown is one of the polluted and structurally modified urban rivers in South Africa, and there is no published information regarding its water quality and ecological status. Water quality is threatened by human activities including the disposal of treated and raw sewage, livestock farming, and agriculture. This study was conducted to determine the ecological status of the river by assessing its biological, chemical, and physical components in relation to man-mediated activities. Biological responses of macroinvertebrates were used to assess changes in water quality through space and time based on the South African Scoring System version 5 and the Average Score per Taxon water quality indices. The results showed poor water quality due to high nitrate and ammonium concentrations derived from sewage, and channel modifications by agricultural activities and dumping of solid waste. Channel width, water depth, dissolved oxygen, nitrate, and ammonium concentrations were the main drivers of macroinvertebrate distribution patterns and had the most influence on the variability in macroinvertebrates taxa richness, diversity and abundance. Diatoms were also used to assess water quality, specifically to indicate the trophic status of the river based on changes in the Trophic Diatom Index. The results suggested that the Bloukrans River was eutrophic during the course of this study. However, the trophic status varied with freshwater input, resulting in mesotrophic conditions during flooding and eutrophication in dry seasons. Changes in pH, phosphate concentration, water velocity (current speed), and temperature influenced the distribution of diatoms in the Bloukrans River. However, only pH was important at the community level and significantly influenced diatom abundances. Stable nitrogen isotope ratios (S15N) of autotrophs and primary and secondary consumers revealed noticeable differences between tissues of organisms exposed to treated sewage and those without any exposure. The S15N values in biota occurring above the sewage treatment discharge point were low, and those collected below the sewage point were higher. Although fertilizer derived nitrogen is generally depleted in 15N, agriculture-derived nitrogen could not be excluded as a possible source since animals at the sample site that was most affected by agricultural activities had the highest S15N values. This study provided valuable information on the ecological status of the Bloukrans River and identified the major activities associated with reduced biodiversity and water quality.
- Full Text:
- Date Issued: 2017
Airline revenue management performance measurement of South African Airways origin-destination revenue management
- Authors: Githiri, Duncan Wanjau
- Date: 2017
- Subjects: Revenue management , Airlines Finance , Performance Measurement , Airlines Rates Mathematical models , South African Airways
- Language: English
- Type: text , Thesis , Masters , MBA
- Identifier: http://hdl.handle.net/10962/59188 , vital:27455
- Description: Revenue Management (RM) in the airline industry is the practise of selling fixed capacity as a service over a finite time horizon. The market is characterised by the customers’ willingness to pay different prices for the service. This creates the opportunity to target different customer segments and use price differential to attain the optimal passenger fare mix to maximise revenue. The aim is to maximise revenue and an airline can expect revenue increase of between 3 to 7 percent with the successful implementation of a Revenue Management system. The question of whether the revenue increase can be attributed to the RMS is crucial in determining its level of success and validating the optimisation strategy applied (Rannou and Melli, 2003). South African Airways (SAA) migration from Leg-based optimisation to Origin-Destination (O&D) network based revenue management optimisation created the opportunity for this study to measure and evaluate the RMS performance. Revenue performance measuring tools using inventory systems data to measure RMS performance, ASK (Available Seat Kilometre), RASK (Revenue per Available Seat Kilometre), CASK (Cost per Available Seat Kilometre), RPK (Revenue Passenger Kilometre) and cabin factor yield. The limitations relating to the performance measuring tools utilising inventory system data, is the inability for continuous measurement and the isolation of the impact to revenue due to the RMS on its own. In seeking to gauge the performance of the O&D optimisation, the Revenue Opportunity Model (ROM) is applied. ROM is a post departure measuring tool utilised to continuously measure and isolate the contribution of the RMS on SAA’s O&D network. The revenue opportunity achieved versus the potential revenue was assessed. A revenue comparison of the airlines 2014 and 2015 financial year is performed. The results of the analysis showed the O&D optimisation yielded positive revenue capture on routes that applied the correct optimisation strategy. Recommendations on the optimisation strategy to be applied on routes having average or low revenues captured are presented. The aim is to provide the SAA revenue management department with tangible solutions that would result in increased revenue for the SAA network.
- Full Text:
- Date Issued: 2017
- Authors: Githiri, Duncan Wanjau
- Date: 2017
- Subjects: Revenue management , Airlines Finance , Performance Measurement , Airlines Rates Mathematical models , South African Airways
- Language: English
- Type: text , Thesis , Masters , MBA
- Identifier: http://hdl.handle.net/10962/59188 , vital:27455
- Description: Revenue Management (RM) in the airline industry is the practise of selling fixed capacity as a service over a finite time horizon. The market is characterised by the customers’ willingness to pay different prices for the service. This creates the opportunity to target different customer segments and use price differential to attain the optimal passenger fare mix to maximise revenue. The aim is to maximise revenue and an airline can expect revenue increase of between 3 to 7 percent with the successful implementation of a Revenue Management system. The question of whether the revenue increase can be attributed to the RMS is crucial in determining its level of success and validating the optimisation strategy applied (Rannou and Melli, 2003). South African Airways (SAA) migration from Leg-based optimisation to Origin-Destination (O&D) network based revenue management optimisation created the opportunity for this study to measure and evaluate the RMS performance. Revenue performance measuring tools using inventory systems data to measure RMS performance, ASK (Available Seat Kilometre), RASK (Revenue per Available Seat Kilometre), CASK (Cost per Available Seat Kilometre), RPK (Revenue Passenger Kilometre) and cabin factor yield. The limitations relating to the performance measuring tools utilising inventory system data, is the inability for continuous measurement and the isolation of the impact to revenue due to the RMS on its own. In seeking to gauge the performance of the O&D optimisation, the Revenue Opportunity Model (ROM) is applied. ROM is a post departure measuring tool utilised to continuously measure and isolate the contribution of the RMS on SAA’s O&D network. The revenue opportunity achieved versus the potential revenue was assessed. A revenue comparison of the airlines 2014 and 2015 financial year is performed. The results of the analysis showed the O&D optimisation yielded positive revenue capture on routes that applied the correct optimisation strategy. Recommendations on the optimisation strategy to be applied on routes having average or low revenues captured are presented. The aim is to provide the SAA revenue management department with tangible solutions that would result in increased revenue for the SAA network.
- Full Text:
- Date Issued: 2017
Release success of captive bred Cape Vultures (Gyps coprotheres) in the Magaliesberg Mountains, South Africa
- Authors: Hirschauer, Maggie
- Date: 2017
- Subjects: Vultures -- South Africa -- Magaliesburg , Vultures -- South Africa -- Behavior
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/4743 , vital:20720
- Description: The Cape Vulture, Gyps coprotheres, is currently classified as ‘endangered’. Endemic to southern Africa, its population has declined continuously over the past 40 years. The species is facing multiple anthropogenic threats. Notably, birds frequently collide with power lines and some cannot be released after treatment. This has led to the establishment of a captive breeding population with the hope that captive bred young can supplement wild populations and re-establish a now- abandoned breeding colony in the Magaliesberg Mountains, South Africa. This study aimed to follow the breeding behaviours of the captive colony and assess the appropriateness of chick rearing conditions. The study also aimed to monitor the behaviour, physical condition and dispersal of ten captive bred vultures after release in relation to their age. Behavioural observations of captive adult breeding and parental behaviours were conducted to establish whether chicks developed under comparable conditions to wild chicks. A high percentage of total colony copulation attempts (22 %) were extra-pair copulations. Four paired males formed ephemeral extra-pair relationships, two of which were homosexual. Chicks fledged earlier than wild chicks, on average at 128 days old. Wild and captive bred birds were observed at carcasses to compare competitive and feeding behaviours. Older birds, both wild and captive, fed the most efficiently. Preliminary evidence suggests females are more dominant and have higher display rates than males. Captive bred juvenile and four year old birds’ competitive and feeding behaviours (interaction rate, feeding rate, display rate, dominance, aggressiveness, and feeding efficiency) were the closest to, but still generally below, average values for same-aged wild birds. An index of body condition, body mass, and the prevalence of fault bars on the rectrices were used to assess their physical condition. After eight months, none of the ten birds had moved more than 8 km from the release site, nor had they foraged away from the vulture restaurant on site. Although altitude records of > 3100 m were recorded, their flight skills seemed inadequate. Future management considerations include the initiation of a pre-release exercise regime, the establishment of an acclimatization enclosure removed from the breeding site, and a varied or reduced post-release feeding schedule. Fledglings should be relocated and housed at the release enclosure until they are four years old.
- Full Text:
- Date Issued: 2017
- Authors: Hirschauer, Maggie
- Date: 2017
- Subjects: Vultures -- South Africa -- Magaliesburg , Vultures -- South Africa -- Behavior
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/4743 , vital:20720
- Description: The Cape Vulture, Gyps coprotheres, is currently classified as ‘endangered’. Endemic to southern Africa, its population has declined continuously over the past 40 years. The species is facing multiple anthropogenic threats. Notably, birds frequently collide with power lines and some cannot be released after treatment. This has led to the establishment of a captive breeding population with the hope that captive bred young can supplement wild populations and re-establish a now- abandoned breeding colony in the Magaliesberg Mountains, South Africa. This study aimed to follow the breeding behaviours of the captive colony and assess the appropriateness of chick rearing conditions. The study also aimed to monitor the behaviour, physical condition and dispersal of ten captive bred vultures after release in relation to their age. Behavioural observations of captive adult breeding and parental behaviours were conducted to establish whether chicks developed under comparable conditions to wild chicks. A high percentage of total colony copulation attempts (22 %) were extra-pair copulations. Four paired males formed ephemeral extra-pair relationships, two of which were homosexual. Chicks fledged earlier than wild chicks, on average at 128 days old. Wild and captive bred birds were observed at carcasses to compare competitive and feeding behaviours. Older birds, both wild and captive, fed the most efficiently. Preliminary evidence suggests females are more dominant and have higher display rates than males. Captive bred juvenile and four year old birds’ competitive and feeding behaviours (interaction rate, feeding rate, display rate, dominance, aggressiveness, and feeding efficiency) were the closest to, but still generally below, average values for same-aged wild birds. An index of body condition, body mass, and the prevalence of fault bars on the rectrices were used to assess their physical condition. After eight months, none of the ten birds had moved more than 8 km from the release site, nor had they foraged away from the vulture restaurant on site. Although altitude records of > 3100 m were recorded, their flight skills seemed inadequate. Future management considerations include the initiation of a pre-release exercise regime, the establishment of an acclimatization enclosure removed from the breeding site, and a varied or reduced post-release feeding schedule. Fledglings should be relocated and housed at the release enclosure until they are four years old.
- Full Text:
- Date Issued: 2017
Ionospheric disturbances during magnetic storms at SANAE
- Authors: Hiyadutuje, Alicreance
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/54956 , vital:26639
- Description: The coronal mass ejections (CMEs) and solar flares associated with extreme solar activity may strike the Earth's magnetosphere and give rise to geomagnetic storms. During geomagnetic storms, the polar plasma dynamics may influence the middle and low-latitude ionosphere via travelling ionospheric disturbances (TIDs). These are wave-like electron density disturbances caused by atmospheric gravity waves propagating in the ionosphere. TIDs focus and defocus SuperDARN signals producing a characteristic pattern of ground backscattered power (Samson et al., 1989). Geomagnetic storms may cause a decrease of total electron content (TEC), i.e. a negative storm effect, or/and an increase of TEC, i.e. a positive storm effect. The aim of this project was to investigate the ionospheric response to strong storms (Dst < -100 nT) between 2011 and 2015, using TEC and scintillation measurements derived from GPS receivers as well as SuperDARN power, Doppler velocity and convection maps. In this study the ionosphere's response to geomagnetic storms is determined by the magnitude and time of occurrence of the geomagnetic storm. The ionospheric TEC results of this study show that most of the storm effects observed were a combination of both negative and positive per storm per station (77.8%), and only 8.9% and 13.3% of effects on TEC were negative and positive respectively. The highest number of storm effects occurred in autumn (36.4%), while 31.6%, 28.4% and 3.6% occurred in winter, spring and summer respectively. During the storms studied, 71.4% had phase scintillation in the range of 0.7 - 1 radians, and only 14.3% of the storms had amplitude scintillations near 0.4. The storms studied at SANAE station generated TIDs with periods of less than an hour and amplitudes in the range 0.2 - 5 TECU. These TIDs were found to originate from the high-velocity plasma flows, some of which are visible in SuperDARN convection maps. Early studies concluded that likely sources of these disturbances correspond to ionospheric current surges (Bristow et al., 1994) in the dayside auroral zone (Huang et al., 1998).
- Full Text:
- Date Issued: 2017
- Authors: Hiyadutuje, Alicreance
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/54956 , vital:26639
- Description: The coronal mass ejections (CMEs) and solar flares associated with extreme solar activity may strike the Earth's magnetosphere and give rise to geomagnetic storms. During geomagnetic storms, the polar plasma dynamics may influence the middle and low-latitude ionosphere via travelling ionospheric disturbances (TIDs). These are wave-like electron density disturbances caused by atmospheric gravity waves propagating in the ionosphere. TIDs focus and defocus SuperDARN signals producing a characteristic pattern of ground backscattered power (Samson et al., 1989). Geomagnetic storms may cause a decrease of total electron content (TEC), i.e. a negative storm effect, or/and an increase of TEC, i.e. a positive storm effect. The aim of this project was to investigate the ionospheric response to strong storms (Dst < -100 nT) between 2011 and 2015, using TEC and scintillation measurements derived from GPS receivers as well as SuperDARN power, Doppler velocity and convection maps. In this study the ionosphere's response to geomagnetic storms is determined by the magnitude and time of occurrence of the geomagnetic storm. The ionospheric TEC results of this study show that most of the storm effects observed were a combination of both negative and positive per storm per station (77.8%), and only 8.9% and 13.3% of effects on TEC were negative and positive respectively. The highest number of storm effects occurred in autumn (36.4%), while 31.6%, 28.4% and 3.6% occurred in winter, spring and summer respectively. During the storms studied, 71.4% had phase scintillation in the range of 0.7 - 1 radians, and only 14.3% of the storms had amplitude scintillations near 0.4. The storms studied at SANAE station generated TIDs with periods of less than an hour and amplitudes in the range 0.2 - 5 TECU. These TIDs were found to originate from the high-velocity plasma flows, some of which are visible in SuperDARN convection maps. Early studies concluded that likely sources of these disturbances correspond to ionospheric current surges (Bristow et al., 1994) in the dayside auroral zone (Huang et al., 1998).
- Full Text:
- Date Issued: 2017
Regulation of cell biology by extracellular species of the Hsp90- Hsp70 organising protein (Hop)
- Authors: Höft, Maxine Allison
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59199 , vital:27465
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2017
- Authors: Höft, Maxine Allison
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59199 , vital:27465
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2017
The relationship between OCT4 and an aggressive phenotype in triple negative breast cancer (TNBC)
- Authors: Jackson, Hayley Claire
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59209 , vital:27477
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2017
- Authors: Jackson, Hayley Claire
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59209 , vital:27477
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2017