Understanding foraging practices in Lagos metropolis to redesign urban greenspaces in support of human-nature interactions
- Adeyemi, Opeyemi, Shackleton, Charlie M
- Authors: Adeyemi, Opeyemi , Shackleton, Charlie M
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/401353 , vital:69728 , xlink:href="https://doi.org/10.1016/j.ufug.2022.127805"
- Description: Enhancing knowledge of urban foraging across different urban landscapes is an urgent matter given that about two-thirds of the world’s population is projected to live in urban areas by 2050, whilst 50 % of Africa’s population is expected to live in cities by 2030. This study was conducted in Lagos metropolis which is the economic hub of Africa’s most populous country. Data was collected using an in-person, semi-structured questionnaire from 347 persons who were 18 years or older to identify foragers and non-foragers, their sociodemographic profiles, and their foraging practices. Results revealed that about two out of three persons sampled forage to some degree. The collection happened more in domestic gardens (34 %) and streets (27 %) than in other foraging sites (such as unused lands, institutional grounds and lakes and riparian fringes). A total of 35 species were reportedly foraged within the metropolis, mostly for food (71 %) and medicine (26 %). Mango (Mangifera indica), pawpaw (Carica papaya), tropical almond (Terminalia catappa), fish (various species), bitter leaf (Vernonia amygdalina) and spinach (Spinacia oleracea) were the most gathered species. The distance travelled to foraging wild species ranged from 5 m to 25 km. The primary motivation for foraging was the acquisition of fresh and natural materials. However, some felt that foraging was a stressful activity. The unavailability of foraging sites and species was the major constraint to foraging in this megacity. Hence, efforts to increase the edible components of public green spaces and to provide free access could potentially allow more people to forage and make current foraging more secure. We suggest that making provisions for foraging in urban planning goals could contribute to the sustainable development of cities in Africa and elsewhere.
- Full Text:
- Date Issued: 2023
- Authors: Adeyemi, Opeyemi , Shackleton, Charlie M
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/401353 , vital:69728 , xlink:href="https://doi.org/10.1016/j.ufug.2022.127805"
- Description: Enhancing knowledge of urban foraging across different urban landscapes is an urgent matter given that about two-thirds of the world’s population is projected to live in urban areas by 2050, whilst 50 % of Africa’s population is expected to live in cities by 2030. This study was conducted in Lagos metropolis which is the economic hub of Africa’s most populous country. Data was collected using an in-person, semi-structured questionnaire from 347 persons who were 18 years or older to identify foragers and non-foragers, their sociodemographic profiles, and their foraging practices. Results revealed that about two out of three persons sampled forage to some degree. The collection happened more in domestic gardens (34 %) and streets (27 %) than in other foraging sites (such as unused lands, institutional grounds and lakes and riparian fringes). A total of 35 species were reportedly foraged within the metropolis, mostly for food (71 %) and medicine (26 %). Mango (Mangifera indica), pawpaw (Carica papaya), tropical almond (Terminalia catappa), fish (various species), bitter leaf (Vernonia amygdalina) and spinach (Spinacia oleracea) were the most gathered species. The distance travelled to foraging wild species ranged from 5 m to 25 km. The primary motivation for foraging was the acquisition of fresh and natural materials. However, some felt that foraging was a stressful activity. The unavailability of foraging sites and species was the major constraint to foraging in this megacity. Hence, efforts to increase the edible components of public green spaces and to provide free access could potentially allow more people to forage and make current foraging more secure. We suggest that making provisions for foraging in urban planning goals could contribute to the sustainable development of cities in Africa and elsewhere.
- Full Text:
- Date Issued: 2023
Using Citizen Science to Protect Natural Untreated Drinking Water Sources: Natural Springs in Rural Catchments and B3 Municipalities in the Eastern Cape
- Mtati, Nosi, Chetty, Preven, Norman, Yondela, Mvulane, Paulose, Libala, Notiswa, Weaver, Matthew J, Wolff, Margaret M, Cockburn, Jessica J, Mazibuko, Thembalani
- Authors: Mtati, Nosi , Chetty, Preven , Norman, Yondela , Mvulane, Paulose , Libala, Notiswa , Weaver, Matthew J , Wolff, Margaret M , Cockburn, Jessica J , Mazibuko, Thembalani
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/425732 , vital:72279 , ISBN 978-0-6392-0550-2 , https://wrcwebsite.azurewebsites.net/wp-content/uploads/mdocs/3097%20final.pdf
- Description: Citizen science is a well-known mechanism used by researchers to col-lect scientific data working together with citizens. It can also be used by interested and concerned citizens (social activists regarding environ-mental threats) to protect natural occurring things like biodiversity, rare species that are threatened extension and much more. It can be a natu-ral occurring process that evolves with time but it can also have some guidelines of how to monitor, collect, analyse and disseminate data. In this project we used participatory action research processes to co-develop tools (co-create being one of the types of citizen science) with local communities, using their knowledge of their area to monitor and protect natural springs. Springs are useful for providing drinking water for people but also for livestock. In rural areas and small towns where service delivery is not reliable, natural occurring water sources become the reliable supply for these communities. Springs also provide ecosys-tem services as they are a keystone ecological infrastructure. These natural water sources can be threatened by pollution, especially that of livestock which is mostly unattended, because they are sometimes shared by people and animals. This poses health risks to the users. This study co-developed the “spring protection and sustainable use” tool/s that can be used to guide communities and local government on how to protect these important water sources. Citizen science also cre-ates opportunities for learning to take place among the participants as well as the researchers involved.
- Full Text:
- Date Issued: 2023
- Authors: Mtati, Nosi , Chetty, Preven , Norman, Yondela , Mvulane, Paulose , Libala, Notiswa , Weaver, Matthew J , Wolff, Margaret M , Cockburn, Jessica J , Mazibuko, Thembalani
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/425732 , vital:72279 , ISBN 978-0-6392-0550-2 , https://wrcwebsite.azurewebsites.net/wp-content/uploads/mdocs/3097%20final.pdf
- Description: Citizen science is a well-known mechanism used by researchers to col-lect scientific data working together with citizens. It can also be used by interested and concerned citizens (social activists regarding environ-mental threats) to protect natural occurring things like biodiversity, rare species that are threatened extension and much more. It can be a natu-ral occurring process that evolves with time but it can also have some guidelines of how to monitor, collect, analyse and disseminate data. In this project we used participatory action research processes to co-develop tools (co-create being one of the types of citizen science) with local communities, using their knowledge of their area to monitor and protect natural springs. Springs are useful for providing drinking water for people but also for livestock. In rural areas and small towns where service delivery is not reliable, natural occurring water sources become the reliable supply for these communities. Springs also provide ecosys-tem services as they are a keystone ecological infrastructure. These natural water sources can be threatened by pollution, especially that of livestock which is mostly unattended, because they are sometimes shared by people and animals. This poses health risks to the users. This study co-developed the “spring protection and sustainable use” tool/s that can be used to guide communities and local government on how to protect these important water sources. Citizen science also cre-ates opportunities for learning to take place among the participants as well as the researchers involved.
- Full Text:
- Date Issued: 2023
Women farmers leading and co-learning in an agroecology movement at the intersections of gender and climate
- Chanyau, Ludwig, Rosenberg, Eureta
- Authors: Chanyau, Ludwig , Rosenberg, Eureta
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/373873 , vital:66730 , xlink:href="https://doi.org/10.1080/10130950.2023.2239313"
- Description: This study, carried out in the Eastern Cape Province of South Africa, was particularly interested in women farmers’ access to social learning spaces for expanding their knowledge about farming in the context of climate change. Small-scale women and peasant farmers face historical intersectional inequalities as a result of the colonial and apartheid past which has continued to disadvantage women in the present through exclusion, limited or no access to finance, insecure or no land tenure, little bargaining power and unequal access to water. The gender prejudices and unequal access to resources experienced by women is brought into sharp relief by climate change. The article provides a case study of an agroecology movement led by women farmers that promotes climate-appropriate, low-cost farming practices using community and home gardens. The practices are tried out and further developed by women farmers themselves, relying on agroecology-informed extension services, open dialogue and the support of communities of practice. Unlike traditional top-down approaches to farmer learning common in public extension services, extension officers in the movement participate in creating conditions for co-learning and co-construction of new knowledge − that is, social learning − thus responding directly to their needs as farmers. The lead researcher joined in and observed farming and learning activities following an ethnographic approach. Farmers and other movement members were engaged in semi-structured interviews which explored the value derived from social learning (Wenger-Trayner and Wenger-Trayner Citation2020). The article concludes that the movement is responding to many of the intersectional challenges that women farmers in the Eastern Cape face. Further, its social learning approach holds potential for expanding women farmers’ ability to provide for themselves and their communities and inform their climate change adaptation.
- Full Text:
- Date Issued: 2023
- Authors: Chanyau, Ludwig , Rosenberg, Eureta
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/373873 , vital:66730 , xlink:href="https://doi.org/10.1080/10130950.2023.2239313"
- Description: This study, carried out in the Eastern Cape Province of South Africa, was particularly interested in women farmers’ access to social learning spaces for expanding their knowledge about farming in the context of climate change. Small-scale women and peasant farmers face historical intersectional inequalities as a result of the colonial and apartheid past which has continued to disadvantage women in the present through exclusion, limited or no access to finance, insecure or no land tenure, little bargaining power and unequal access to water. The gender prejudices and unequal access to resources experienced by women is brought into sharp relief by climate change. The article provides a case study of an agroecology movement led by women farmers that promotes climate-appropriate, low-cost farming practices using community and home gardens. The practices are tried out and further developed by women farmers themselves, relying on agroecology-informed extension services, open dialogue and the support of communities of practice. Unlike traditional top-down approaches to farmer learning common in public extension services, extension officers in the movement participate in creating conditions for co-learning and co-construction of new knowledge − that is, social learning − thus responding directly to their needs as farmers. The lead researcher joined in and observed farming and learning activities following an ethnographic approach. Farmers and other movement members were engaged in semi-structured interviews which explored the value derived from social learning (Wenger-Trayner and Wenger-Trayner Citation2020). The article concludes that the movement is responding to many of the intersectional challenges that women farmers in the Eastern Cape face. Further, its social learning approach holds potential for expanding women farmers’ ability to provide for themselves and their communities and inform their climate change adaptation.
- Full Text:
- Date Issued: 2023
A Change Project story: learning and caring for South Africa’s rivers
- Authors: Chetty, Preven
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/391060 , vital:68613 , xlink:href="https://eeasa.org.za/wp-content/uploads/2023/02/Final-EEASA-Bulletin-20212022-Final.pdf"
- Description: Water quality and scarcity is a major concern in Southern Africa and globally especially as the threat of climate change looms even closer. The current drought in South Africa and worsening rainfall has exposed the brittle nature of this country’s resilience to water shortages. Compounded to this is the fact that most rivers in South Africa are not adequately cared for and are under tremendous strain. Everyone who depends on these rivers whether directly or indirectly will soon be entering a new era where water will no longer be a ubiquitous commodity.
- Full Text:
- Date Issued: 2022
- Authors: Chetty, Preven
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/391060 , vital:68613 , xlink:href="https://eeasa.org.za/wp-content/uploads/2023/02/Final-EEASA-Bulletin-20212022-Final.pdf"
- Description: Water quality and scarcity is a major concern in Southern Africa and globally especially as the threat of climate change looms even closer. The current drought in South Africa and worsening rainfall has exposed the brittle nature of this country’s resilience to water shortages. Compounded to this is the fact that most rivers in South Africa are not adequately cared for and are under tremendous strain. Everyone who depends on these rivers whether directly or indirectly will soon be entering a new era where water will no longer be a ubiquitous commodity.
- Full Text:
- Date Issued: 2022
A laminated, emergentist view of skills ecosystems
- Ramsarup, Presha, Lotz-Sisitka, Heila, McGrath, Simon
- Authors: Ramsarup, Presha , Lotz-Sisitka, Heila , McGrath, Simon
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/370074 , vital:66295 , xlink:href="https://doi.org/10.1080/14767430.2022.2145768"
- Description: In this paper we present a model of vocational education and training (VET) that can be used to guide decisions relating to VET in Africa today. This model takes the critique of the neoclassical, neoliberal model of VET as its starting point. Guided by Bhaskar's Critical Naturalism, we use immanent critique to consider the adequacy of proposed alternatives to the neoclassical approach, such as: the heterodox approach, which foregrounds explanations based on human capital and political economy; and Hodgson and Spours' social ecosystem model, which addresses some of the limitations of the heterodox account by including, social and ecosystem elements. Finally, we offer a version of the social ecosystem model that, according to our analysis, explains more of the empirical evidence than previous models. Our version of the social ecosystem model differs from earlier versions in terms of its explicit reference to the critical realist ideas of position- practices and emergence.
- Full Text:
- Date Issued: 2022
- Authors: Ramsarup, Presha , Lotz-Sisitka, Heila , McGrath, Simon
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/370074 , vital:66295 , xlink:href="https://doi.org/10.1080/14767430.2022.2145768"
- Description: In this paper we present a model of vocational education and training (VET) that can be used to guide decisions relating to VET in Africa today. This model takes the critique of the neoclassical, neoliberal model of VET as its starting point. Guided by Bhaskar's Critical Naturalism, we use immanent critique to consider the adequacy of proposed alternatives to the neoclassical approach, such as: the heterodox approach, which foregrounds explanations based on human capital and political economy; and Hodgson and Spours' social ecosystem model, which addresses some of the limitations of the heterodox account by including, social and ecosystem elements. Finally, we offer a version of the social ecosystem model that, according to our analysis, explains more of the empirical evidence than previous models. Our version of the social ecosystem model differs from earlier versions in terms of its explicit reference to the critical realist ideas of position- practices and emergence.
- Full Text:
- Date Issued: 2022
A simple quinoline-thiophene Schiff base turn-off chemosensor for Hg2+ detection
- Musikavanhu, Brian, Muthusamy, Selvaraj, Zhu, Dongwei, Xue, Zhaoli, Yu, Qian, Chivumba, Choonzo N, Mack, John, Nyokong, Tebello, Wang, Shengjun, Zhao, Long
- Authors: Musikavanhu, Brian , Muthusamy, Selvaraj , Zhu, Dongwei , Xue, Zhaoli , Yu, Qian , Chivumba, Choonzo N , Mack, John , Nyokong, Tebello , Wang, Shengjun , Zhao, Long
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/230362 , vital:49771 , xlink:href="https://doi.org/10.1016/j.saa.2021.120338"
- Description: A new Schiff base probe (QT) consisting of 8-aminoquinoline (Q) and thiophene-2-carboxaldehyde (T) moieties has been synthesized. QT undergoes chelation-enhanced fluorescence quenching when exposed to Hg2+ due to coordination by the sulfur and nitrogen atoms of QT thus forming a facile “turn-off” sensor. The formation of the chelation complex was confirmed by UV–visible absorption and emission spectral measurements, 1H NMR titration and density functional theory calculations. These studies revealed that the probe exhibits high selectivity and sensitivity towards Hg2+ in the presence of other common metal ions. A low detection limit of 23.4 nM was determined and a Job plot confirmed a 2:1 stoichiometry between QT and Hg2+. The potential utility of QT as a sensor for Hg2+ ions in human HeLa cells was determined by confocal fluorescence microscopy, and its suitability for use in the field with environmental samples was tested with Whatman filter paper strips.
- Full Text:
- Date Issued: 2022
- Authors: Musikavanhu, Brian , Muthusamy, Selvaraj , Zhu, Dongwei , Xue, Zhaoli , Yu, Qian , Chivumba, Choonzo N , Mack, John , Nyokong, Tebello , Wang, Shengjun , Zhao, Long
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/230362 , vital:49771 , xlink:href="https://doi.org/10.1016/j.saa.2021.120338"
- Description: A new Schiff base probe (QT) consisting of 8-aminoquinoline (Q) and thiophene-2-carboxaldehyde (T) moieties has been synthesized. QT undergoes chelation-enhanced fluorescence quenching when exposed to Hg2+ due to coordination by the sulfur and nitrogen atoms of QT thus forming a facile “turn-off” sensor. The formation of the chelation complex was confirmed by UV–visible absorption and emission spectral measurements, 1H NMR titration and density functional theory calculations. These studies revealed that the probe exhibits high selectivity and sensitivity towards Hg2+ in the presence of other common metal ions. A low detection limit of 23.4 nM was determined and a Job plot confirmed a 2:1 stoichiometry between QT and Hg2+. The potential utility of QT as a sensor for Hg2+ ions in human HeLa cells was determined by confocal fluorescence microscopy, and its suitability for use in the field with environmental samples was tested with Whatman filter paper strips.
- Full Text:
- Date Issued: 2022
A Sn (iv) porphyrin with mitochondria targeting properties for enhanced photodynamic activity against MCF-7 cells
- Babu, Balaji, Mack, John, Nyokong, Tebello
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/230897 , vital:49829 , xlink:href="https://doi.org/10.1039/D2NJ00350C"
- Description: Two readily synthesized Sn(IV) porphyrins (SnP, SnPH) have been prepared with and without the cationic triphenylphosphonium moiety (TPP+), which have high singlet oxygen quantum yields (ca. 0.72) and long triplet state lifetimes. The Sn(IV) porphyrin with a TPP+ moiety (SnPH) exhibits favorable photodynamic activity against MCF-7 cells with IC50 values of 2.9 μM. SnPH exhibits higher cellular uptake than SnP in MCF-7 cells. A Rhodamine 123 (Rh123) assay showed that SnPH targets mitochondria and induces apoptosis by generating reactive oxygen species. The results demonstrate that this structural modification strategy merits further in-depth study.
- Full Text:
- Date Issued: 2022
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/230897 , vital:49829 , xlink:href="https://doi.org/10.1039/D2NJ00350C"
- Description: Two readily synthesized Sn(IV) porphyrins (SnP, SnPH) have been prepared with and without the cationic triphenylphosphonium moiety (TPP+), which have high singlet oxygen quantum yields (ca. 0.72) and long triplet state lifetimes. The Sn(IV) porphyrin with a TPP+ moiety (SnPH) exhibits favorable photodynamic activity against MCF-7 cells with IC50 values of 2.9 μM. SnPH exhibits higher cellular uptake than SnP in MCF-7 cells. A Rhodamine 123 (Rh123) assay showed that SnPH targets mitochondria and induces apoptosis by generating reactive oxygen species. The results demonstrate that this structural modification strategy merits further in-depth study.
- Full Text:
- Date Issued: 2022
Application of gold and palladium nanoparticles supported on polymelamine microspheres in the oxidation of 1-phenylethanol and some other phenyl substituted alcohols
- Storm, Ené, Maggott, Emile D, Mashazi, Philani N, Nyokong, Tebello, Malgas-Enus, Rehana, Mapolie, Selwyn F
- Authors: Storm, Ené , Maggott, Emile D , Mashazi, Philani N , Nyokong, Tebello , Malgas-Enus, Rehana , Mapolie, Selwyn F
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/299824 , vital:57858 , xlink:href="https://doi.org/10.1016/j.mcat.2022.112456"
- Description: Melamine formaldehyde and melamine resorcinol formaldehyde microspheres were decorated with Au and Pd nanoparticles and applied as heterogeneous catalysts in the oxidation of 1-phenylethanol. The catalysts showed similar activities irrespective of the support employed. Moderate conversion activities of 48–50% were achieved when using acetonitrile as solvent; however, when employing water as solvent, the supported catalysts formed a three-phase, emulsion system which facilitated the catalytic conversion of 1-phenylethanol to acetophenone at much higher conversions of around 83%. The oxidant, TBHP, decomposed rapidly in acetonitrile, whilst it remained stable in aqueous solution, leading to the enhanced activities observed when using water as solvent. These systems also proved to be recyclable for up to five cycles, with only slight loss of activity observed; this can be attributed to the physical loss of catalyst during the workup procedure conducted between each cycle.
- Full Text:
- Date Issued: 2022
- Authors: Storm, Ené , Maggott, Emile D , Mashazi, Philani N , Nyokong, Tebello , Malgas-Enus, Rehana , Mapolie, Selwyn F
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/299824 , vital:57858 , xlink:href="https://doi.org/10.1016/j.mcat.2022.112456"
- Description: Melamine formaldehyde and melamine resorcinol formaldehyde microspheres were decorated with Au and Pd nanoparticles and applied as heterogeneous catalysts in the oxidation of 1-phenylethanol. The catalysts showed similar activities irrespective of the support employed. Moderate conversion activities of 48–50% were achieved when using acetonitrile as solvent; however, when employing water as solvent, the supported catalysts formed a three-phase, emulsion system which facilitated the catalytic conversion of 1-phenylethanol to acetophenone at much higher conversions of around 83%. The oxidant, TBHP, decomposed rapidly in acetonitrile, whilst it remained stable in aqueous solution, leading to the enhanced activities observed when using water as solvent. These systems also proved to be recyclable for up to five cycles, with only slight loss of activity observed; this can be attributed to the physical loss of catalyst during the workup procedure conducted between each cycle.
- Full Text:
- Date Issued: 2022
Aptamer versus antibody as probes for the impedimetric biosensor for human epidermal growth factor receptor
- Centane, Sixolile, Nyokong, Tebello
- Authors: Centane, Sixolile , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229884 , vital:49720 , xlink:href="https://doi.org/10.1016/j.jinorgbio.2022.111764"
- Description: In the present work, the performance of aptamer and antibody bioreceptors for the detection of the human epidermal growth factor receptor (HER2) cancer biomarker on a glassy carbon electrode is reported. The carboxylic acid group rich graphene quantum dots (GQDs) modified with gold nanoparticles and a porphyrin binuclear framework (CoP-BNF) were used to modify the glassy carbon electrode. The aptamer and antibody were both amine functionalized and attached to GQDs and CoP-BNF through an amide bond. The designed immunosensors and aptasensors in this work were characterized using electrochemical impedance spectroscopy. The aptasensors, compared to the immunosensors gave better limit of detection values. The aptasensor outperforms the immunosensor in terms of its reusability and storability, while the immunosensor could not be regenerated for subsequent experiments. The potential applicability of all sensors in this work was also investigated, by detection of HER2 in spiked human serum with acceptable results.
- Full Text:
- Date Issued: 2022
- Authors: Centane, Sixolile , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229884 , vital:49720 , xlink:href="https://doi.org/10.1016/j.jinorgbio.2022.111764"
- Description: In the present work, the performance of aptamer and antibody bioreceptors for the detection of the human epidermal growth factor receptor (HER2) cancer biomarker on a glassy carbon electrode is reported. The carboxylic acid group rich graphene quantum dots (GQDs) modified with gold nanoparticles and a porphyrin binuclear framework (CoP-BNF) were used to modify the glassy carbon electrode. The aptamer and antibody were both amine functionalized and attached to GQDs and CoP-BNF through an amide bond. The designed immunosensors and aptasensors in this work were characterized using electrochemical impedance spectroscopy. The aptasensors, compared to the immunosensors gave better limit of detection values. The aptasensor outperforms the immunosensor in terms of its reusability and storability, while the immunosensor could not be regenerated for subsequent experiments. The potential applicability of all sensors in this work was also investigated, by detection of HER2 in spiked human serum with acceptable results.
- Full Text:
- Date Issued: 2022
Assessing climate risk to support urban forests in a changing climate
- Esperon-Rodriguez, Manuel, Rymer, Paul D, Power, Sally A, Barton, David N, Cariñanos, Paloma, Dobbs, Cynnamon, Eleuterio, Ana A, Escobedo, Francisco J, Hauer, Richard, Hermy, Martin, Jahani, Ali, Onyekwelu, Jonathan C, Östberg, Johan, Pataki, Diane, Randrup, Thomas B, Rasmussen, Tørres, Roman, Lara A, Russo, Alessio, Shackleton, Charlie M, Solfjeld, Ingjerd, van Doorn, Natalie S, Wells, Matthew J, Wiström, Björn, Yan, Pengbo, Yang, Jun, Tjoelker, Mark G
- Authors: Esperon-Rodriguez, Manuel , Rymer, Paul D , Power, Sally A , Barton, David N , Cariñanos, Paloma , Dobbs, Cynnamon , Eleuterio, Ana A , Escobedo, Francisco J , Hauer, Richard , Hermy, Martin , Jahani, Ali , Onyekwelu, Jonathan C , Östberg, Johan , Pataki, Diane , Randrup, Thomas B , Rasmussen, Tørres , Roman, Lara A , Russo, Alessio , Shackleton, Charlie M , Solfjeld, Ingjerd , van Doorn, Natalie S , Wells, Matthew J , Wiström, Björn , Yan, Pengbo , Yang, Jun , Tjoelker, Mark G
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402191 , vital:69829 , xlink:href="https://doi.org/10.1002/ppp3.10240"
- Description: Globally, cities are planning for resilience through urban greening initiatives as governments understand the importance of urban forests in improving quality of life and mitigating climate change. However, the persistence of urban forests and the ecosystem benefits they provide are threatened by climate change, and systematic assessments of causes of tree dieback and mortality in urban environments are rare. Long-term monitoring studies and adaptive management are needed to identify and prevent climate change-driven failures and mortality. Research and monitoring when coupled with systematic forecasting will enable governments to incorporate climate change resilience into urban forestry planning. Future scenarios in which urban forests are resilient or in decline will depend on the management and planning actions we make today.
- Full Text:
- Date Issued: 2022
- Authors: Esperon-Rodriguez, Manuel , Rymer, Paul D , Power, Sally A , Barton, David N , Cariñanos, Paloma , Dobbs, Cynnamon , Eleuterio, Ana A , Escobedo, Francisco J , Hauer, Richard , Hermy, Martin , Jahani, Ali , Onyekwelu, Jonathan C , Östberg, Johan , Pataki, Diane , Randrup, Thomas B , Rasmussen, Tørres , Roman, Lara A , Russo, Alessio , Shackleton, Charlie M , Solfjeld, Ingjerd , van Doorn, Natalie S , Wells, Matthew J , Wiström, Björn , Yan, Pengbo , Yang, Jun , Tjoelker, Mark G
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402191 , vital:69829 , xlink:href="https://doi.org/10.1002/ppp3.10240"
- Description: Globally, cities are planning for resilience through urban greening initiatives as governments understand the importance of urban forests in improving quality of life and mitigating climate change. However, the persistence of urban forests and the ecosystem benefits they provide are threatened by climate change, and systematic assessments of causes of tree dieback and mortality in urban environments are rare. Long-term monitoring studies and adaptive management are needed to identify and prevent climate change-driven failures and mortality. Research and monitoring when coupled with systematic forecasting will enable governments to incorporate climate change resilience into urban forestry planning. Future scenarios in which urban forests are resilient or in decline will depend on the management and planning actions we make today.
- Full Text:
- Date Issued: 2022
Assessing the electrocatalytic activity of a localized push-pull system in cobalt phthalocyanine/graphene quantum dot hybrids
- Nkhahle, Reitumetse, Nyokong, Tebello
- Authors: Nkhahle, Reitumetse , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229909 , vital:49722 , xlink:href="https://doi.org/10.1016/j.matchemphys.2022.125842"
- Description: In this study, two cobalt phthalocyanines (asymmetric complex 1) and symmetric (complex 2) were synthesized and conjugated to nitrogen-doped graphene quantum dots (NGQDs) through covalent and non-covalent means to create Co phthalocyanine (CoPc)-NGQDs hybrid systems. The CoPcs and conjugates were applied as electrode modifiers on a glassy carbon electrode in the electrochemical sensing of nitrite. Of the CoPcs alone, complex 1 performed better than complex 2 regarding the limits of detection (LoD) recorded (5.74 μM for 1 and 15.1 μM for 2). Regarding the conjugates/nanocomposites, the π-π stacked conjugate derived from complex 2 (2πNGQDs) demonstrated highly favourable electrochemical potential with an LoD value of 0.70 μM. The nanocomposites fashioned from complex 1 were marred by a reduced loading which rendered the conjugates poor electrochemical sensors. These observations however do not disqualify GQDs as complementary nanomaterials to phthalocyanines but rather shed light on seeking alternative routes to increasing the Pc loading in conjugates (more so in π-π stacked conjugates).
- Full Text:
- Date Issued: 2022
- Authors: Nkhahle, Reitumetse , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229909 , vital:49722 , xlink:href="https://doi.org/10.1016/j.matchemphys.2022.125842"
- Description: In this study, two cobalt phthalocyanines (asymmetric complex 1) and symmetric (complex 2) were synthesized and conjugated to nitrogen-doped graphene quantum dots (NGQDs) through covalent and non-covalent means to create Co phthalocyanine (CoPc)-NGQDs hybrid systems. The CoPcs and conjugates were applied as electrode modifiers on a glassy carbon electrode in the electrochemical sensing of nitrite. Of the CoPcs alone, complex 1 performed better than complex 2 regarding the limits of detection (LoD) recorded (5.74 μM for 1 and 15.1 μM for 2). Regarding the conjugates/nanocomposites, the π-π stacked conjugate derived from complex 2 (2πNGQDs) demonstrated highly favourable electrochemical potential with an LoD value of 0.70 μM. The nanocomposites fashioned from complex 1 were marred by a reduced loading which rendered the conjugates poor electrochemical sensors. These observations however do not disqualify GQDs as complementary nanomaterials to phthalocyanines but rather shed light on seeking alternative routes to increasing the Pc loading in conjugates (more so in π-π stacked conjugates).
- Full Text:
- Date Issued: 2022
Asymmetrical zinc (II) phthalocyanines conjugated to metal tungstate nanoparticles for photoinactivation of Staphylococcus aureus
- Mgidlana, Sithi, Managa, Muthumuni, Nyokong, Tebello
- Authors: Mgidlana, Sithi , Managa, Muthumuni , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295718 , vital:57372 , xlink:href="https://doi.org/10.1080/00958972.2022.2090837"
- Description: In this study, we report for the first time on the photodynamic antimicrobial chemotherapy (PACT) of asymmetrical zinc(II) phthalocyanines and their conjugates with nickel tungstate (NiWO4), cobalt tungstate (CoWO4) and bismuth tungstate (Bi2WO6) nanoparticles. CoWO4, NiWO4 and Bi2WO6 were capped with glutathione and covalently linked to three asymmetrical zinc(II) phthalocyanines for PACT. The plate count method was used to investigate the effect of covalently linking asymmetrical zinc(II) phthalocyanines to nanoparticles under light (for PACT against Staphylococcus aureus) and in the dark. Both Pc complexes and the conjugates indicated minimum dark-toxicity. The conjugates showed greater antimicrobial activity against a gram-positive and drug resistant bacteria, Staphylococcus aureus, than Pc complexes alone.
- Full Text:
- Date Issued: 2022
- Authors: Mgidlana, Sithi , Managa, Muthumuni , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295718 , vital:57372 , xlink:href="https://doi.org/10.1080/00958972.2022.2090837"
- Description: In this study, we report for the first time on the photodynamic antimicrobial chemotherapy (PACT) of asymmetrical zinc(II) phthalocyanines and their conjugates with nickel tungstate (NiWO4), cobalt tungstate (CoWO4) and bismuth tungstate (Bi2WO6) nanoparticles. CoWO4, NiWO4 and Bi2WO6 were capped with glutathione and covalently linked to three asymmetrical zinc(II) phthalocyanines for PACT. The plate count method was used to investigate the effect of covalently linking asymmetrical zinc(II) phthalocyanines to nanoparticles under light (for PACT against Staphylococcus aureus) and in the dark. Both Pc complexes and the conjugates indicated minimum dark-toxicity. The conjugates showed greater antimicrobial activity against a gram-positive and drug resistant bacteria, Staphylococcus aureus, than Pc complexes alone.
- Full Text:
- Date Issued: 2022
Best of both worlds: The thermal physiology of Hydrellia egeriae, a biological control agent for the submerged aquatic weed, Egeria densa in South Africa
- Smith, Rosali, Coetzee, Julie A, Hill, Martin P
- Authors: Smith, Rosali , Coetzee, Julie A , Hill, Martin P
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/417913 , vital:71494 , xlink:href="https://doi.org/10.1007/s10526-022-10142-w"
- Description: The submerged aquatic weed, Egeria densa Planch. (Hydrocharitaceae) or Brazilian waterweed, is a secondary invader of eutrophic freshwater systems in South Africa, following the successful management of floating aquatic weeds. In 2018, the leaf and stem-mining fly, Hydrellia egeriae Rodrigues-Júnior, Mathis and Hauser (Diptera: Ephydridae), was released against E. densa, the first agent released against a submerged aquatic weed in South Africa. During its life stages, the biological control agent is exposed to two environments, air and water. The thermal physiology of both life stages was investigated to optimize agent establishment through fine-tuned release strategies. The thermal physiological limits of H. egeriae encompassed its host plant’s optimal temperature range of 10 to 35 °C, with lower and upper critical temperatures of 2.6 to 47.0 °C, lower and upper lethal temperatures of − 5.6 and 40.6 °C for adults, and − 6.3 to 41.3 °C for larvae. Results from development time experiments and degree-day accumulation showed that the agent is capable of establishing at all E. densa sites in South Africa, with between 6.9 and 8.3 generations per year. However, cold temperatures (14 °C) prolonged the agent’s development time to three months, allowing it to only develop through one generation in winter. Predictions obtained from laboratory thermal physiology experiments corroborates field data, where the agent has established at all the sites it was released.
- Full Text:
- Date Issued: 2022
- Authors: Smith, Rosali , Coetzee, Julie A , Hill, Martin P
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/417913 , vital:71494 , xlink:href="https://doi.org/10.1007/s10526-022-10142-w"
- Description: The submerged aquatic weed, Egeria densa Planch. (Hydrocharitaceae) or Brazilian waterweed, is a secondary invader of eutrophic freshwater systems in South Africa, following the successful management of floating aquatic weeds. In 2018, the leaf and stem-mining fly, Hydrellia egeriae Rodrigues-Júnior, Mathis and Hauser (Diptera: Ephydridae), was released against E. densa, the first agent released against a submerged aquatic weed in South Africa. During its life stages, the biological control agent is exposed to two environments, air and water. The thermal physiology of both life stages was investigated to optimize agent establishment through fine-tuned release strategies. The thermal physiological limits of H. egeriae encompassed its host plant’s optimal temperature range of 10 to 35 °C, with lower and upper critical temperatures of 2.6 to 47.0 °C, lower and upper lethal temperatures of − 5.6 and 40.6 °C for adults, and − 6.3 to 41.3 °C for larvae. Results from development time experiments and degree-day accumulation showed that the agent is capable of establishing at all E. densa sites in South Africa, with between 6.9 and 8.3 generations per year. However, cold temperatures (14 °C) prolonged the agent’s development time to three months, allowing it to only develop through one generation in winter. Predictions obtained from laboratory thermal physiology experiments corroborates field data, where the agent has established at all the sites it was released.
- Full Text:
- Date Issued: 2022
Beyond epistemology: the challenge of reconceptualising knowledge in higher education
- Luckett, Kathy, Blackie, Margaret
- Authors: Luckett, Kathy , Blackie, Margaret
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426598 , vital:72371 , xlink:href="https://doi.org/10.1080/13562517.2022.2111206"
- Description: In this Point of Departure, we build on the scholarship of Suellen Shay. Shay explored the nature of higher education, examining assessment and the relation between curriculum and knowledge structures across several disciplines. She drew on the work of Bernstein and in her later work responded to the calls for decolonisation. We first contextualise the work of Basil Bernstein and explain its attraction for scholars of education development in the South African HE context. We then provide a brief summary of recent decolonial scholarship. On this basis, we speculate what a critique and caricature of the Bernsteinian tradition by the decolonial school might look like. In turn we offer a caricatured rebuttal by the Bernsteinian school to the decolonial critique. Finally, we pull our argument together and, by drawing on Bhaskar’s critical realism, assert the importance of an adequate theorisation of ontology.
- Full Text:
- Date Issued: 2022
- Authors: Luckett, Kathy , Blackie, Margaret
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426598 , vital:72371 , xlink:href="https://doi.org/10.1080/13562517.2022.2111206"
- Description: In this Point of Departure, we build on the scholarship of Suellen Shay. Shay explored the nature of higher education, examining assessment and the relation between curriculum and knowledge structures across several disciplines. She drew on the work of Bernstein and in her later work responded to the calls for decolonisation. We first contextualise the work of Basil Bernstein and explain its attraction for scholars of education development in the South African HE context. We then provide a brief summary of recent decolonial scholarship. On this basis, we speculate what a critique and caricature of the Bernsteinian tradition by the decolonial school might look like. In turn we offer a caricatured rebuttal by the Bernsteinian school to the decolonial critique. Finally, we pull our argument together and, by drawing on Bhaskar’s critical realism, assert the importance of an adequate theorisation of ontology.
- Full Text:
- Date Issued: 2022
Can Local Knowledge of Small-Scale Fishers Be Used to Monitor and Assess Changes in Marine Ecosystems in a European Context?
- Piñeiro-Corbeira, Cristina, Barrientos, Sara, Barreiro, Rodolfo, Aswani, Shankar, Pascual-Fernández, José, De la Cruz-Modino, Raquel
- Authors: Piñeiro-Corbeira, Cristina , Barrientos, Sara , Barreiro, Rodolfo , Aswani, Shankar , Pascual-Fernández, José , De la Cruz-Modino, Raquel
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/391331 , vital:68642 , ISBN 978-3-031-01980-7 , https://doi.org/10.1007/978-3-031-01980-7_24
- Description: Significance Statement In the last decades, many coastal areas have observed dramatic changes in marine ecosystems, due to anthropogenic and environmental alterations. The general absence of long-term data sets in the marine environment and, more specifically, on benthic and demersal communities represents a severe issue for management and conservation. We propose to incorporate the small-scale fishers’ knowledge and science for better policy recommendations, both in terms of fisheries optimization and resource conservation. Based on two different cases of study with diverse ecosystems, we explore the combination of quantitative and qualitative tools, and participative techniques used to incorporate fishers’ local ecological knowledge. The results highlight fishers’ capacity to identify coastal and marine landscapes resources and changes, reinforcing and complementing the scientific assessment.
- Full Text:
- Date Issued: 2022
- Authors: Piñeiro-Corbeira, Cristina , Barrientos, Sara , Barreiro, Rodolfo , Aswani, Shankar , Pascual-Fernández, José , De la Cruz-Modino, Raquel
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , book
- Identifier: http://hdl.handle.net/10962/391331 , vital:68642 , ISBN 978-3-031-01980-7 , https://doi.org/10.1007/978-3-031-01980-7_24
- Description: Significance Statement In the last decades, many coastal areas have observed dramatic changes in marine ecosystems, due to anthropogenic and environmental alterations. The general absence of long-term data sets in the marine environment and, more specifically, on benthic and demersal communities represents a severe issue for management and conservation. We propose to incorporate the small-scale fishers’ knowledge and science for better policy recommendations, both in terms of fisheries optimization and resource conservation. Based on two different cases of study with diverse ecosystems, we explore the combination of quantitative and qualitative tools, and participative techniques used to incorporate fishers’ local ecological knowledge. The results highlight fishers’ capacity to identify coastal and marine landscapes resources and changes, reinforcing and complementing the scientific assessment.
- Full Text:
- Date Issued: 2022
Challenges of implementing management accounting innovations
- Oyewo, Babajide, Hussain, Syed T, Simbi, Chipo
- Authors: Oyewo, Babajide , Hussain, Syed T , Simbi, Chipo
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426264 , vital:72336 , xlink:href="https://www.jstor.org/stable/48717780"
- Description: This study investigates the challenges of implementing innovative management accounting techniques, referred to as strategic management accounting (SMA), the interrelationship among the challenges and the impact of the challenges on SMA usage intensity. From the analysis of survey data obtained from listed manufacturing companies in Nigeria, the result supports the conclusion that SMA implementation challenges are interrelated. However, lack of top management support and low awareness/lack of knowledge are contributory to most of the implementation challenges. The challenges discouraging the intensive use of SMA are the perception that SMA implementation is unnecessary as strategy issues are already integrated in other functions within the organization, high implementation cost and problems relating to information flow between departments within the organization. The current study contributes to knowledge in the sense that it is the first (to the researchers’ knowledge) to examine specifically the interrelationship among SMA implementation challenges in the Nigerian context, thereby drawing attention to the need to consider the challenges to embracing management accounting innovations holistically. Knowledge of SMA implementation challenges could help explain the low adoption rate of SMA in developing countries. Such knowledge might be helpful in providing a robust response to the challenges of implementing management accounting innovations.
- Full Text:
- Date Issued: 2022
- Authors: Oyewo, Babajide , Hussain, Syed T , Simbi, Chipo
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426264 , vital:72336 , xlink:href="https://www.jstor.org/stable/48717780"
- Description: This study investigates the challenges of implementing innovative management accounting techniques, referred to as strategic management accounting (SMA), the interrelationship among the challenges and the impact of the challenges on SMA usage intensity. From the analysis of survey data obtained from listed manufacturing companies in Nigeria, the result supports the conclusion that SMA implementation challenges are interrelated. However, lack of top management support and low awareness/lack of knowledge are contributory to most of the implementation challenges. The challenges discouraging the intensive use of SMA are the perception that SMA implementation is unnecessary as strategy issues are already integrated in other functions within the organization, high implementation cost and problems relating to information flow between departments within the organization. The current study contributes to knowledge in the sense that it is the first (to the researchers’ knowledge) to examine specifically the interrelationship among SMA implementation challenges in the Nigerian context, thereby drawing attention to the need to consider the challenges to embracing management accounting innovations holistically. Knowledge of SMA implementation challenges could help explain the low adoption rate of SMA in developing countries. Such knowledge might be helpful in providing a robust response to the challenges of implementing management accounting innovations.
- Full Text:
- Date Issued: 2022
Challenges of implementing management accounting innovations
- Oyewo, Babajide, Hussain, Syed T, Chipo Simbi
- Authors: Oyewo, Babajide , Hussain, Syed T , Chipo Simbi
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426610 , vital:72372 , xlink:href="https://www.jstor.org/stable/48717780"
- Description: This study investigates the challenges of implementing innovative management accounting techniques, referred to as strategic management accounting (SMA), the interrelationship among the challenges and the impact of the challenges on SMA usage intensity. From the analysis of survey data obtained from listed manufacturing companies in Nigeria, the result supports the conclusion that SMA implementation challenges are interrelated. However, lack of top management support and low awareness/lack of knowledge are contributory to most of the implementation challenges. The challenges discouraging the intensive use of SMA are the perception that SMA implementation is unnecessary as strategy issues are already integrated in other functions within the organization, high implementation cost and problems relating to information flow between departments within the organization. The current study contributes to knowledge in the sense that it is the first (to the researchers’ knowledge) to examine specifically the interrelationship among SMA implementation challenges in the Nigerian context, thereby drawing attention to the need to consider the challenges to embracing management accounting innovations holistically. Knowledge of SMA implementation challenges could help explain the low adoption rate of SMA in developing countries. Such knowledge might be helpful in providing a robust response to the challenges of implementing management accounting innovations.
- Full Text:
- Date Issued: 2022
- Authors: Oyewo, Babajide , Hussain, Syed T , Chipo Simbi
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/426610 , vital:72372 , xlink:href="https://www.jstor.org/stable/48717780"
- Description: This study investigates the challenges of implementing innovative management accounting techniques, referred to as strategic management accounting (SMA), the interrelationship among the challenges and the impact of the challenges on SMA usage intensity. From the analysis of survey data obtained from listed manufacturing companies in Nigeria, the result supports the conclusion that SMA implementation challenges are interrelated. However, lack of top management support and low awareness/lack of knowledge are contributory to most of the implementation challenges. The challenges discouraging the intensive use of SMA are the perception that SMA implementation is unnecessary as strategy issues are already integrated in other functions within the organization, high implementation cost and problems relating to information flow between departments within the organization. The current study contributes to knowledge in the sense that it is the first (to the researchers’ knowledge) to examine specifically the interrelationship among SMA implementation challenges in the Nigerian context, thereby drawing attention to the need to consider the challenges to embracing management accounting innovations holistically. Knowledge of SMA implementation challenges could help explain the low adoption rate of SMA in developing countries. Such knowledge might be helpful in providing a robust response to the challenges of implementing management accounting innovations.
- Full Text:
- Date Issued: 2022
Characterising the shared genetic influences between schizophrenia and subcortical brain regions
- Wooton, Olivia, Campbell, Megan, Jahanshad, Neda, Thompson, Paul, Stein, Dan J, Dalvie, Shareefa
- Authors: Wooton, Olivia , Campbell, Megan , Jahanshad, Neda , Thompson, Paul , Stein, Dan J , Dalvie, Shareefa
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/302450 , vital:58197 , xlink:href="https://doi.org/10.1016/j.euroneuro.2022.07.533"
- Description: Background: Abnormalities in brain structural volumes are well established in schizophrenia (SZ) and have been proposed as an endophenotype for the disorder. Despite increasing interest in the genetic relationship between brain structural volumes and SZ, our knowledge of the genetic overlap between the phenotypes is limited. This study aims to extend our current understanding of the shared genetic influences between SZ and subcortical brain volumes using data from the latest genome-wide association studies for the respective phenotypes (GWAS) and novel statistical approaches. Additionally, we will explore whether the association between schizophrenia and abnormal regional brain volumes is causal in nature. Methods: Summary statistics were obtained from the largest Psychiatric Genomic Consortium (PGC)-SZ GWAS (Ncase = 69,369, Ncontrol = 236,642) and the CHARGEENIGMA-UKBB GWAS of volumetric measures for eight subcortical brain regions (the nucleus accumbens, amygdala, brainstem, caudate nucleus, hippocampus, globus pallidus, putamen, and thalamus), and total intracranial volume (N = 30,983 - 40,380). Single nucleotide polymorphism (SNP) effect concordance analysis (SECA) was used to assess pleiotropy and concordance. Genetic correlation was assessed using linkage disequilibrium score regression (LDSR) and the pleiotropy informed conditional FDR approach was applied to identify SNPs associated with SZ conditional on their association with subcortical brain volumes. Mendelian randomization (MR) was used to test for causal association between SZ and each brain region. Results: There was evidence of global pleiotropy between SZ, and all examined subcortical brain regions. Inverse concordance between the genetic determinants of SZ and volumes of the nucleus accumbens, amygdala, brainstem, hippocampus, and thalamus was observed. Increased statistical power to detect SZ risk loci was shown when conditioning on subcortical brain volumes. There was no significant evidence for a causal effect of any of the examined brain regions on schizophrenia risk. Discussion: These data confirm the shared genetic basis of SZ and specific intracranial and subcortical brain volumes and provide evidence for negative concordance between SZ and volumes of the nucleus accumbens, amygdala, brainstem, hippocampus, and thalamus. Leveraging the genetic overlap between SZ and subcortical brain volumes has the potential to provide novel insights into the biological basis of the disorder.
- Full Text:
- Date Issued: 2022
- Authors: Wooton, Olivia , Campbell, Megan , Jahanshad, Neda , Thompson, Paul , Stein, Dan J , Dalvie, Shareefa
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/302450 , vital:58197 , xlink:href="https://doi.org/10.1016/j.euroneuro.2022.07.533"
- Description: Background: Abnormalities in brain structural volumes are well established in schizophrenia (SZ) and have been proposed as an endophenotype for the disorder. Despite increasing interest in the genetic relationship between brain structural volumes and SZ, our knowledge of the genetic overlap between the phenotypes is limited. This study aims to extend our current understanding of the shared genetic influences between SZ and subcortical brain volumes using data from the latest genome-wide association studies for the respective phenotypes (GWAS) and novel statistical approaches. Additionally, we will explore whether the association between schizophrenia and abnormal regional brain volumes is causal in nature. Methods: Summary statistics were obtained from the largest Psychiatric Genomic Consortium (PGC)-SZ GWAS (Ncase = 69,369, Ncontrol = 236,642) and the CHARGEENIGMA-UKBB GWAS of volumetric measures for eight subcortical brain regions (the nucleus accumbens, amygdala, brainstem, caudate nucleus, hippocampus, globus pallidus, putamen, and thalamus), and total intracranial volume (N = 30,983 - 40,380). Single nucleotide polymorphism (SNP) effect concordance analysis (SECA) was used to assess pleiotropy and concordance. Genetic correlation was assessed using linkage disequilibrium score regression (LDSR) and the pleiotropy informed conditional FDR approach was applied to identify SNPs associated with SZ conditional on their association with subcortical brain volumes. Mendelian randomization (MR) was used to test for causal association between SZ and each brain region. Results: There was evidence of global pleiotropy between SZ, and all examined subcortical brain regions. Inverse concordance between the genetic determinants of SZ and volumes of the nucleus accumbens, amygdala, brainstem, hippocampus, and thalamus was observed. Increased statistical power to detect SZ risk loci was shown when conditioning on subcortical brain volumes. There was no significant evidence for a causal effect of any of the examined brain regions on schizophrenia risk. Discussion: These data confirm the shared genetic basis of SZ and specific intracranial and subcortical brain volumes and provide evidence for negative concordance between SZ and volumes of the nucleus accumbens, amygdala, brainstem, hippocampus, and thalamus. Leveraging the genetic overlap between SZ and subcortical brain volumes has the potential to provide novel insights into the biological basis of the disorder.
- Full Text:
- Date Issued: 2022
Climatic suitability and compatibility of the invasive Iris pseudacorus L.(Iridaceae) in the Southern Hemisphere: Considerations for biocontrol
- Minuti, Gianmarco, Stiers, Iris, Coetzee, Julie A
- Authors: Minuti, Gianmarco , Stiers, Iris , Coetzee, Julie A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/423293 , vital:72045 , xlink:href="https://doi.org/10.1016/j.biocontrol.2022.104886"
- Description: Iris pseudacorus L. (Iridaceae) is an emergent macrophyte native to Europe, North Africa and western Asia. Considered invasive in wetland habitats around the world, this species is now the target of a biocontrol programme in the Southern Hemisphere. Native range surveys of the weed led to the selection of the flea beetle, Aphthona nonstriata Goeze (Coleoptera: Chrysomelidae), as a candidate biocontrol agent. An important aspect to consider in weed biocontrol is the ability of an agent to establish and thrive in the environment where it is released. Climatic incompatibility between source and intended release sites can in fact limit the success of a biocontrol programme. In the current study, the potential climatic niche of I. pseudacorus and A. nonstriata in the Southern Hemisphere was analysed. The ecological niche modelling software MaxEnt was used to map the climatic suitability of both organisms across invaded regions in South America, southern Africa and Australasia. Furthermore, occurrence records from each invaded range were used independently to model the climatic compatibility of I. pseudacorus in Europe, in order to prioritize areas of the native range to explore during future surveys for potential biocontrol agents. The models identified areas at high risk of invasion by I. pseudacorus in northern Argentina, Uruguay, southern Brazil and central Chile, as well as numerous provinces of eastern South Africa, Lesotho, southern Australia and New Zealand. Accordingly, the highest climatic suitability for A. nonstriata was predicted across the humid temperate climates of north-east Argentina, Uruguay, southern Brazil, southern South Africa, south-east Australia and New Zealand. These results can eventually be used in future release plans to prioritize areas where establishment and survival of the agent is expected to be highest. At the same time, it may be useful to search the native range of the weed for biological control agents showing high climatic adaptation towards the intended release sites of each invaded range. In this regards, our climatic compatibility models identified high-priority areas across the Mediterranean regions of Italy and southern France, as well as the temperate regions of central and western Europe. Altogether, the current study provides useful new information to tackle the invasion and advance the biocontrol programme of I. pseudacorus in the Southern Hemisphere.
- Full Text:
- Date Issued: 2022
- Authors: Minuti, Gianmarco , Stiers, Iris , Coetzee, Julie A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/423293 , vital:72045 , xlink:href="https://doi.org/10.1016/j.biocontrol.2022.104886"
- Description: Iris pseudacorus L. (Iridaceae) is an emergent macrophyte native to Europe, North Africa and western Asia. Considered invasive in wetland habitats around the world, this species is now the target of a biocontrol programme in the Southern Hemisphere. Native range surveys of the weed led to the selection of the flea beetle, Aphthona nonstriata Goeze (Coleoptera: Chrysomelidae), as a candidate biocontrol agent. An important aspect to consider in weed biocontrol is the ability of an agent to establish and thrive in the environment where it is released. Climatic incompatibility between source and intended release sites can in fact limit the success of a biocontrol programme. In the current study, the potential climatic niche of I. pseudacorus and A. nonstriata in the Southern Hemisphere was analysed. The ecological niche modelling software MaxEnt was used to map the climatic suitability of both organisms across invaded regions in South America, southern Africa and Australasia. Furthermore, occurrence records from each invaded range were used independently to model the climatic compatibility of I. pseudacorus in Europe, in order to prioritize areas of the native range to explore during future surveys for potential biocontrol agents. The models identified areas at high risk of invasion by I. pseudacorus in northern Argentina, Uruguay, southern Brazil and central Chile, as well as numerous provinces of eastern South Africa, Lesotho, southern Australia and New Zealand. Accordingly, the highest climatic suitability for A. nonstriata was predicted across the humid temperate climates of north-east Argentina, Uruguay, southern Brazil, southern South Africa, south-east Australia and New Zealand. These results can eventually be used in future release plans to prioritize areas where establishment and survival of the agent is expected to be highest. At the same time, it may be useful to search the native range of the weed for biological control agents showing high climatic adaptation towards the intended release sites of each invaded range. In this regards, our climatic compatibility models identified high-priority areas across the Mediterranean regions of Italy and southern France, as well as the temperate regions of central and western Europe. Altogether, the current study provides useful new information to tackle the invasion and advance the biocontrol programme of I. pseudacorus in the Southern Hemisphere.
- Full Text:
- Date Issued: 2022
Comparative avifaunal richness and diversity in invasive Acacia dealbata patches and adjacent montane grasslands
- Seath, Jessica, Shackleton, Charles M
- Authors: Seath, Jessica , Shackleton, Charles M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/406585 , vital:70287 , xlink:href="https://hdl.handle.net/10520/ejc-afzoo_v57_i1_a12"
- Description: Abstract Invasive alien species are regarded as the second greatest threat to biodiversity globally. Yet, at a local scale their effects may vary, underlying the requirement for more local-scale studies across taxa and settings. Here we consider the effects of an alien invasive tree (Acacia dealbata, 5–8 m tall) on avifaunal numbers, richness and diversity in A. dealbata patches of three sizes relative to adjacent montane grasslands. Analysis of historical aerial photographs showed that A. dealbata first occurred in the area in the late 1930s/early 1940s and has continued to spread, despite some efforts by the landowner to keep it in check. It now covers approximately 11% of the site. This has provided habitat for a number of bird species more characteristic of wooded vegetation types. The number, richness and diversity of birds were greater in A. dealbata patches than the adjacent grasslands of equivalent size. These measures increased with increasing patch size, but more rapidly for A. dealbata patches than grassland ones. Only six of the 48 species of birds recorded were common between the two vegetation types. The most common feeding guild in the A. dealbata patches was insectivores, whereas in the grasslands it was omnivores. Although the invasion of A. dealbata has added to the habitat diversity of the area, thereby facilitating increased avifaunal diversity, if it continues to spread, then the populations and perhaps richness of grassland birds are likely to be negatively affected.
- Full Text:
- Date Issued: 2022
- Authors: Seath, Jessica , Shackleton, Charles M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/406585 , vital:70287 , xlink:href="https://hdl.handle.net/10520/ejc-afzoo_v57_i1_a12"
- Description: Abstract Invasive alien species are regarded as the second greatest threat to biodiversity globally. Yet, at a local scale their effects may vary, underlying the requirement for more local-scale studies across taxa and settings. Here we consider the effects of an alien invasive tree (Acacia dealbata, 5–8 m tall) on avifaunal numbers, richness and diversity in A. dealbata patches of three sizes relative to adjacent montane grasslands. Analysis of historical aerial photographs showed that A. dealbata first occurred in the area in the late 1930s/early 1940s and has continued to spread, despite some efforts by the landowner to keep it in check. It now covers approximately 11% of the site. This has provided habitat for a number of bird species more characteristic of wooded vegetation types. The number, richness and diversity of birds were greater in A. dealbata patches than the adjacent grasslands of equivalent size. These measures increased with increasing patch size, but more rapidly for A. dealbata patches than grassland ones. Only six of the 48 species of birds recorded were common between the two vegetation types. The most common feeding guild in the A. dealbata patches was insectivores, whereas in the grasslands it was omnivores. Although the invasion of A. dealbata has added to the habitat diversity of the area, thereby facilitating increased avifaunal diversity, if it continues to spread, then the populations and perhaps richness of grassland birds are likely to be negatively affected.
- Full Text:
- Date Issued: 2022