List of Titles

Towards a new approach for coastal governance with an assessment of the Plettenberg Bay shore-based linefishery

Authors: King, Claire Margaret
Date: 2006
Subjects: Fishery management -- South Africa -- Plettenberg Bay , Fisheries -- South Africa -- Plettenberg Bay , Coastal zone management -- South Africa -- Plettenberg Bay
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5326 , http://hdl.handle.net/10962/d1005172 , Fishery management -- South Africa -- Plettenberg Bay , Fisheries -- South Africa -- Plettenberg Bay , Coastal zone management -- South Africa -- Plettenberg Bay
Description: The overall aim of this thesis, as required by the funders, was to provide research that would contribute towards the development of a bay management plan, specifically information on the local fisheries. The thesis therefore includes an assessment of the local shore-based linefishery in terms of catch and effort and socio-economics, and the development of indicators from this information with which to assess the sustainability of the fishery. Finally an implementation strategy for an integrated coastal management approach for local resource governance is proposed The shore-based linefishery of Plettenberg Bay was assessed through a combination of roving creel and access point surveys which included questions aimed at the quantification of total effort, total catch and cpue, as well as the spatial trends in catch and effort. Angler demographics as well as opinions and knowledge of current fisheries regulations were obtained and the efficiency of the fishery inspectorate was assessed. The survey period extended from August 2003 to September 2004 during which 1189 angler interviews were conducted. Catch data obtained during this study was compared to catch data gathered during a research tagging program conducted in an area closed to fishing (Tsitsikamma National Park) and a semi-open area (Rebelsrus – Cape St. Francis), thereby highlighting differences in species composition, abundance and size distribution of certain species between areas of differing fishing pressures. The fishery surveys revealed that the shore-based fishery is primarily recreational (99%) and dominated by white males. Most anglers agreed with the current fisheries regulations (60%) and admitted to abiding by them, however when tested on the regulations of their target species, their knowledge was poor. Effort in the fishery was highly seasonal with peaks coinciding with major school holidays. Total annual effort was estimated at 102 566 angler-hours, with distinct spatial patterns in effort. Total annual catch for the Plettenberg Bay shore-based linefishery was estimated at 31 217 fish.year⁻¹ with a total mass of 13.6 tons. Thirty-six fish species (26 teleost species and 10 elasmobranchs species) were identified during the survey period with Blacktail Diplodus capensis, Strepie Sarpa salpa, Red tjor-tjor Pagellus natalensis, Shad Pomatomus saltatrix and Sand steenbras Lithognathus mormyrus being the five most commonly caught species. Only 32% of interviewed anglers were successful in catching a fish with just 22% catching their primary target species. In addition, a large proportion of the anglers (69%) reported a decline in catch rate, with most blaming the commercial sector as a reason for the decline. The overall catch rate was (cpue) 0.374 fish.angler.hour⁻¹ or 170 grams.angler.hour⁻¹, considerably lower than that obtained from the fishery exempt area (TNP = 1. 02 fish.angler.hour⁻¹) and the partially exploited area (Rebelsrus = 0.91 fish.angler.hour⁻¹). In terms of species composition the most obvious difference between the three areas was the low proportion of non-migratory reef-associated species like red roman, poenskop, John brown, santer and bronze bream in Plettenberg Bay. Size comparisons revealed that the majority of species (particularly reef-associated species) were larger in the TNP than both the semi-exploited (Rebelsrus) and exploited area (Plettenberg Bay). Collectively theses findings suggest that certain species have been locally depleted, that recreational fishing has impacted heavily on the fish stocks and that even partial closure or limited access to an area can offer protection. From the results key issues were identified and sustainability indicators proposed according to the three sustainability domains (ecological, institutional and social) proposed by Pajak (2000). Within the ecological domain the most pertinent issue was the low catch rate, particularly for reef-associated species. Indicators to track these issues included: percentage of successful trips (where fish were caught), percentage of anglers that reached their daily bag limits and the proportion of the overall catch that comprised larger, more desirable species. Institutionally the most pertinent issue was the apparent inability of management institutions to manage effectively marine resources within Plettenberg Bay. Indicators within this domain included the proportion of anglers who were inspected, the existence of a localised management plan and an associated monitoring programme. Socially the fishery proved to be fairly sustainable. Indicators included in this domain were the proportion of subsistence anglers in the local fishing community, the percentage of correct answers pertaining to current fishery regulations, the level of noncompliance and the percentage of undersize fish retained. Aggregation of all the indicators within a sustainability matrix revealed that the Plettenberg Bay shore-based linefishery was unsustainable and thus requires increased local management effort. Since there is no local management strategy in place, an integrated coastal management approach for the governance of the coastal resources in Plettenberg Bay has been proposed. The development of a Coastal Management Plan and a subsidiary Bay Management Plan provide the frameworks within which management strategies can be put into operation.
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Date Issued: 2006

Microsatellite and morphometric analysis of chokka squid (Loligo reynaudi) from different spawning aggregations around the South African coast

Authors: Stonier, Terence Anthony
Date: 2013
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5344 , http://hdl.handle.net/10962/d1006779
Description: Accurate information on stock structure is very important to the effective management of any commercially exploited species (Angel et al. 1994), particularly in annual species like Loligo reynaudi. Previous molecular work on a number of fish and cephalopod species has shown that stock structuring may be more complex than originally believed and while much scientific work has been conducted on Loligo reynaudi to date, molecular work has been lacking and this species’ fishery is currently managed as a single stock. The primary aim of this project was to examine the population genetics of Loligo reynaudi on a molecular level, by looking at the levels of genetic variation between different spawning aggregations along the inshore distribution of the chokka squid, with particular attention being paid to any variation between Eastern Cape and Agulhas Bank groups. The secondary aim was to conduct a morphological analysis on samples from the same major areas in order to see if any genetic variation observed would be complemented by phenotypic variation. Two separate sample sets were collected; Genetic samples were collected from 6 different spawning sites along the South African Coast between April and July, 2006 and whole individuals for morphometric analysis were collected from 4 spawning sites between April and July 2007. Samples were screened for genetic variation between different spawning aggregations along the inshore distribution of chokka squid, from Port Alfred in the Eastern Cape, to the western Agulhas Bank. After this a morphometric analysis on samples from the same major areas, Eastern Cape, Agulhas Bank and Angola, was carried out. Genetic results showed significant variation between some of the sample groups. As expected, the Angolan outgroup consistently showed significant variation from other samples, while there was evidence of differentiation between the South African samples themselves. These results could have implications for the previously documented life cycle model of Loligo reynaudi and provide a basis for further study at a finer resolution into where exactly the boundaries of these different groupings can be found. This stock structuring has implications for the management of the species and warrants further genetic research with microsatellites proving to be a powerful tool in the explanation of stock structuring. Unfortunately, due to possible errors in taking measurements, morphometric analysis did not yield useful results which can be described and interpreted in this study. It is felt that further genetic study conducted on a finer scale, should be accompanied by a repeat of the morphometric analysis.
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Date Issued: 2013

Assessment of the effect of Goukamma Marine Protected Area on community structure and fishery dynamics

Authors: Götz, Albrecht
Date: 2006
Subjects: Goukamma Marine Protected Area Reef fishes -- South Africa Marine fishes -- South Africa Fishery management -- South Africa Marine resources conservation -- South Africa Marine parks and reserves -- South Africa Chrysoblephus laticeps Merluccius Argyrosomus
Language: English
Type: Thesis , Doctoral , PhD
Identifier: vital:5230 , http://hdl.handle.net/10962/d1005073
Description: This study presents a detailed investigation into size, density and community structure of temperate marine reef fish in the medium-sized Goukamma Marine Protected Area (Goukamma MPA) and adjacent fishing grounds on the south coast of South Africa. The oceanographic conditions, the spatial distribution of the benthic community and the prevailing fishing effort are also described. Life history traits and per-recruit (PR) models for the principle target species, roman (Crysoblephus laticeps) are compared between the protected and exploited area. From the study results, various strategies are proposed for the use of MPAs in the conservation and management of linefish species along South Africa’s south coast. The distribution and topography of reefs in the protected and exploited sections of the study area were found to be comparable. Atmospheric pressure ranged from 992 to 1,032 mb, being significantly lower in summer. Wind speeds ranged from 0.7 to 71.3 km/h. Water temperatures ranged between 9.0 and 22.2 ºC and turbidity between 0.3 and 45.8 NTU. Water temperature and clarity were uniformly low in winter. In summer the water was generally warm, clear and stratified, with a thermocline at around 20 m, although intermittent upwelling events caused water temperature to decrease and clarity to deteriorate. Current speeds ranged between 0.11 and 2.59 km/h and were significantly higher in spring and autumn. Easterly currents prevailed in spring, summer and autumn and westerly and southerly currents in winter. Hake (Merluccius capensis), various resident reef fish and kob (Argyrosomus japonicus) were most frequently targeted by the local linefishery. A significant amount of illegal fishing was found to occur in the protected area. Fishing effort was found to be highest around the border of the MPA (2.7 boats/km²) and lowest in the core of the MPA (0.2 boats/km²). If law enforcement remains poor it may be necessary to adapt the management strategy to extend the reserve, thereby mitigating against illegal fishing and ensuring a core area of no exploitation. Various other alternatives were investigated and it was demonstrated that the amount of fish caught of legal size could be increased by about 23% and post-release mortality of undersized fish reduced by 50% through the introduction of a suit of restrictive measures. Randomly stratified underwater visual census (UVC) and controlled fishing were used to investigate the ichthyofauna and benthic community at protected and exploited sites in the study area. Resulting density and size data from 273 fishing sites and 177 point counts were analyzed using generalized linear models (GLMs). Fish communities were found to vary significantly, depending on the level of exploitation. Roman, the principle reef fish species targeted by the fishery had significantly higher densities within the protected parts of the study area (CPUE: 4.3 fish/anglerhour; UVC: 2.2 fish/point-count) as compared to the exploited part (CPUE: 3.4 fish/anglerhour; UVC: 1.8 fish/point-count), correlating strongly with the observed fishing effort. Also mean sizes were significantly higher in the protected area (299 mm from fishing survey and 233 mm from diving estimates) as compared to the exploited section (283 mm from fishing survey and 198 mm from diving estimates). Although other fish species also had significantly higher mean sizes at protected sites in most cases their densities were significantly lower. This suggests a top-down control of the fish community by the dominant predator (roman). The results of the UVC showed the diversity of the ichthyofauna to be significantly higher inside the protected area. Interestingly this did not apply to the results of the controlled fishing experiment where the diversity of fish in the catch was lower in the protected area - a result that may be explained by the selectivity of fishing for the most aggressive species – and a reminder of the limitations of controlled fishing experiments. Possibly the most important finding of the study revolved around the benthic community. These were significantly different at exploited and protected sites, with algae and crinoids more abundant at exploited sites. Crinoids are the principle food of roman and were low in abundance where roman abundances were high, suggesting that the dominant top predator reduced crinoids. Furthermore, it substantiates the correlation of roman abundance with fishing effort, since habitat preferences can be ruled out by the observed causal predator-prey distribution pattern. Low algae abundances at protected sites correlated with high strepie (Sarpa salpa) frequencies within the fish communities encountered there. Strepie, a shoaling and abundant benthic grazer, does not compete for food with roman, suggesting a high potential for coexistence of the two species. As expected, and found by other studies, life history traits of roman differed between protected and exploited sample-sites. With a significantly lower age-at-maturity and age-atsex- change, the exploited population showed a typical response to fishing effort. The sex ratio of this protogynous hermaphrodite was found to be sustained at healthy levels by phenotypic plasticity. However, one important additional factor was highlighted by the study; the average condition factor of the protected population was significantly lower (0.0283 g/cm³) compared to the exploited population (0.0295 g/cm³). This was probably due to the higher intra-specific competition for lower food abundance in the protected area. Interestingly the diving and fishing survey methods yielded similar mortality results for roman. Total mortality rate estimates derived from length frequency analysis from the diving and fishing survey were not different (0.32 and 0.29 y⁻¹, respectively) as were natural mortality rate estimates (0.24 and 0.19 y⁻¹, respectively). Natural mortality rate (M) estimates indicated by Pauly’s and Hoenig’s relationship were similar (0.25 and 0.23 y⁻¹, respectively). Detailed yield-per-recruit (Y/R) and spawner biomass-per-recruit (SB/R) analyses were presented for different levels of M, varying age-at-recruitment (tR) and fishing mortality (F). Current tR (7.60 y) and F (0.16 and 0.25 y⁻¹, from the diving and fishing dataset, respectively) suggests an optimal exploitation of the population in the exploited part of the study area. However, a separate SB/R analysis of the male part of the population showed their vulnerability to over-exploitation, even at reduced age-at-sex-change from fishing. There therefore remains a high risk of recruitment failure for the roman population. Of course MPAs can be used to measure stock status directly if the influence of factors such as cachability, habitat and sampling method on CPUE assessments can be limited or reduced. The experimental design in this study allowed for contemporary CPUE comparisons across the border of the Goukamma MPA. Results were similar to those obtained by the SB/R analyses. CPUE extrapolations therefore, using small MPAs, can provide reliable and consistent estimates, and offer a practical alternative to conventional assessment strategies. This study has highlighted the importance of ensuring a well structured and comprehensive survey design when undertaking a comparison of protected and exploited marine areas. The results provide a comprehensive framework for future management of the Goukamma MPA and other protected areas along the temperate coastline of South Africa.
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Date Issued: 2006

Population genomics analysis of yellowfin tuna Thunnus albacares off South Africa reveals need for a shifted management boundary

Authors: Mullins, Rachel Brenna
Date: 2017
Subjects: Yellowfin tuna fisheries -- South Africa -- Western Cape , Genomics , Tuna fisheries -- South Africa , Fishery management -- South Africa
Language: English
Type: text , Thesis , Masters , MSc
Identifier: http://hdl.handle.net/10962/57819 , vital:26992
Description: Yellowfin tuna Thunnus albacares is a commercially and economically important fisheries species, which comprises the second largest component of South Africa’s catch of tuna and tuna-like species. Catches of the species off South Africa are treated as two discrete stocks by the two tuna Regional Fisheries Management Organisations (tRFMOs) under whose jurisdictions they fall. Individuals caught off the Western Cape, west of the boundary between the tRFMOs at 20°E, are included in assessment and management of the Atlantic Ocean yellowfin tuna stock by the International Commission for the Conservation of Atlantic Tunas (ICCAT), and those caught east of this boundary are assessed and managed as part of the Indian Ocean stock by the Indian Ocean Tuna Commission (IOTC). The boundary between these stocks is based on the confluence of the two oceans in this region and does not incorporate the population structure of species. For sustainable exploitation of fisheries resources, it is important that the definition of management stocks reflects species’ biological population structure; the fine-scale stock structure of yellowfin tuna off South Africa is therefore a research priority which this study aimed to address by means of population genomics analyses. Yellowfin tuna exhibit shallow genetic differentiation over wide geographic areas, and as such traditional population genetic approaches have limited power in resolving fishery significant population structure in the species. Herein, a population genomic approach was employed, specifically, genome-wide analysis of single nucleotide polymorphisms (SNPs) discovered using a next-generation DNA sequencing approach, to confer (i) increased statistical power to detect neutral structuring reflecting population connectivity patterns and (ii) signatures of local adaptation. The mitochondrial Control Region (mtDNA CR) was also sequenced to compare the resolving power of different approaches and to permit coalescent based analyses of the species evolutionary history in the region. Neutral SNP loci revealed significant structure within the dataset (Fst=0.0043; P<0.0001); partitioning of this differentiation within the dataset indicated significant differentiation between yellowfin tuna from the Western Cape and the Gulf of Guinea in the eastern Atlantic Ocean, with no significant differentiation between individuals from the Western Cape and Western Indian Ocean regions. This indicates two population units wherein there is a separation of the Gulf of Guinea from the remaining samples (Indian Ocean including Western Cape) that are largely derived from a single genetic population. This pattern was also supported by assignment tests. Positive outlier SNPs, exhibiting signatures of diversifying selection, suggest that individuals from these regions may be locally adapted, as well as demographically isolated. The mtDNA CR did not reveal any significant genetic structure among samples (Fst=0.0030; P=0.309), demonstrating the increased resolving power provided by population genomics approaches, but revealed signatures of historical demographic fluctuations associated with glacial cycles. Based on the findings of this study, it is suggested that yellowfin tuna caught off the Western Cape of South Africa are migrants from the Indian Ocean population, exhibiting significant genetic differentiation from the Atlantic Ocean Gulf of Guinea individuals, and should thus be included in the assessment and management of the Indian Ocean stock. It is therefore recommended that the boundary between the Atlantic and Indian Ocean yellowfin tuna stocks, under the mandates of ICCAT and the IOTC respectively, should be shifted to approximately 13.35°E to include all individuals caught in South African waters in the Indian Ocean stock.
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Date Issued: 2017

Quantifying the ecological and socioeconomic implications of a recovery/collapse of South Africa’s West Coast rock lobster fishery

Authors: Eggers, Jessica Marguerite
Date: 2021-10
Subjects: Jasus lalandii South Africa , Lobster fisheries South Africa , Lobster fisheries Catch effort South Africa , Fishery management South Africa , Small-scale fisheries South Africa , Economics Sociological aspects , Value chain analysis
Language: English
Type: Masters theses , text
Identifier: http://hdl.handle.net/10962/188854 , vital:44792
Description: The West Coast rock lobster (WCRL) Jasus lalandii fishery is South Africa’s third most valuable fishery, but the stock is currently at less than 2% of its pristine biomass. Scientists are warning that if no measures are taken, the WCRL could face commercial extinction. The necessary reductions in the global Total allowable Catch (TAC) seen in past years have had large economic implications for the WCRL value chain, but research into the socio-economic aspects of this fishery is limited. This study, therefore, aims to establish an overview of the economic revenue over the seasons 2016/17 – 2018/19 by exploring changes and trends in the net seasonal income (NSI) for the fishery, sectors within the fishery and different stakeholders. It also investigates the prospects for the sectors and different actors in this fishery over the seasons 2019/2020 - 2030/31 through analysis of the net present value (NPV) under three proposed global TAC management scenarios (global TAC of 640 tonnes, 1084 tonnes and 1280 tonnes). Data concerning costs and incomes as well as dynamics, mechanisms and concerns surrounding the fishery were collected from stakeholders in the different sectors through interviews and surveys. Further, official records from DEFF (catches, actors, vessels and quotas) and projections made by the Marine Resource Assessment (MARAM) team at the University of Cape Town (rates of recovery of the resource and future catches under the different TAC scenarios) were obtained and analysed. Cost and income data were summarised and models characterising the economic flows within the fishery were created. Calculations regarding the NSI and NPV were made using Monte Carlo simulations to account for the uncertainty surrounding many of the input variables. Results show that while the fishery as a whole made economic profits for the three seasons, the decreasing quotas in 2018/19 had a disproportionately negative impact on some of the representative individuals examined within the different sectors. The projections indicate that while each of the sectors as a whole would continue to make profits largely proportional to their allocation under the different TAC scenarios, many vessel owners in the fishery are likely to face economic losses or very marginal gains under the lower quota options, while the NPV for quota holders who outsource the catching of their quota are likely to be proportionally less affected by the changes in global TAC. This dynamic is important to consider for the future of this fishery. If the resource is to recover, and fishing activity is to continue equitably under the decreased quotas that the recovery of the biomass necessitates, the socio-economic context and the dynamics within which the fishers operate must be considered and studied more extensively and socio-economic consequences of a lower global TAC mitigated while improving the ecological status of the resource. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2021
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Date Issued: 2021-10

Optimisation of a sampling protocol for long-term monitoring of temperate reef fishes

Authors: Bennett, Rhett Hamilton
Date: 2008
Subjects: Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5309 , http://hdl.handle.net/10962/d1005154 , Marine parks and reserves -- South Africa , Coastal zone management -- South Africa , Fishery management -- South Africa , Reef fishes -- South Africa , Fish communities -- South Africa , Fish stock assessment
Description: Marine Protected Areas (MPAs), the Ecosystem Approach to Fisheries management (EAF) and Integrated Coastal Management (ICM) have been identified as possible alternatives to traditional linefish management measures, which have largely failed. Monitoring and assessment of fish communities on a long-term basis is necessary, and will provide a means to evaluate the effectiveness of such management measures. Therefore, standardised protocols and optimal sampling methods for long-term monitoring (LTM) and assessment of coastal fish communities are essential. This study aimed to identify suitable methods and develop a protocol for assessment of inshore reef fish communities. A suitable location for evaluation of proposed methods was identified in the warm temperate biogeographical region of South Africa, encompassing the well-established Tsitsikamma Coastal National Park MPA and an adjacent exploited area. Chrysoblephus laticeps (roman) was identified as an indicator species for the study, as it has been well-studied and is well represented in the area. Underwater visual census (UVC) and controlled fishing were identified as suitable methods. UVC transects were found to be superior to point counts, in terms of sampling efficiency, variability, bias and required sample size. An effort of two angler hours per fishing station was shown to provide low catch variability, while at the same time a representative catch and low overall cost and required time. The methods were incorporated in a proposed sampling protocol, and evaluated. The methods were able to detect known differences between protected and exploited communities. It is recommended that LTM within protected areas, for detection of natural change, be focused on community-level indicators, while LTM in exploited areas, aimed at detection of anthropogenic change, be focused on species-level indicators. The proposed protocol with standardised methods will allow for comparisons across a network of LTM sites and provide the opportunity for a broad-scale assessment of the effects of environmental variables on reef fish stocks. The protocol developed in this study has application in other biogeographical regions in South Africa, and other parts of the world. Shift in the focus of much marine research, in South Africa and elsewhere, to LTM, highlights the relevance and timeous nature of this study.
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Date Issued: 2008

Age of squid Loligo reynaudii d’Orbigny, 1845, and its possible use to test effectiveness of the closed season in protecting this resource

Authors: Mwanangombe, Collette Habani
Date: 2020
Subjects: Loliginidae -- Spawning -- South Africa , Loliginidae -- Age determination , Loligo fisheries -- South Africa , Fishery management -- South Africa , Otoliths , Loliginidae – Eggs -- Incubation , Loliginidae – Growth , Fish stock assessment -- South Africa , Recruitment (Population biology) -- South Africa , Loligo reynaudii d’Orbigny
Language: English
Type: Thesis , Masters , MSc
Identifier: http://hdl.handle.net/10962/144333 , vital:38336
Description: This study presents age distributions representing populations of adult Loligo reynaudii, together with the results of spawning and commercial catches to assist in understanding the beneficial role of the closed season. The results were based on 791 samples collected during three closed seasons (November: 2003, 2004 and 2005) and out of closed season during April/May 2005. Age and predicted growth were examined by counting daily rings on statolith microstructures. The age in days after hatching ranged from 168 to 484 days (71-425 mm) in males and from 125 to 478 days (83-263 mm) in females. Average age at spawning was found to be 323 days in males and 316 days in females. Population estimates of growth rates were best described by a linear growth model which revealed that males grew faster than females in length as they grew older with growth rate ranging between 0.63 to 0.83 mm per day for males and between 0.22 to 0.32 mm per day for females. Back-calculated hatch dates and later egg-laying events for parental populations were determined. Results from back calculated egg laying dates (presented as percentage of frequency of all laying dates) indicated a highest total of 36%, 39% and 15% of eggs from all samples were laid during the closed season and nine days after the closed season during year 2003, 2004 and 2005 respectively. Monthly commercial total catches (2002-2005) showed an increase from November soon after the fishery resumed, up until the month of January. Daily catches were highest in November (up to 290 tonnes) relative to the daily catches observed in December and January in all the years. Results led to the conclusion that the closed season (25 October to 22 November) is beneficial for both the chokka resource and the fishery. This is because: a) there is time for enough spawning biomass to accumulate, which subsequently results in high catches (good fishery), in the current year, best immediately after season opens in November; b) there is a link in the results between egg laying dates in the period of closed season and immediately afterwards, and the magnitude of catches in last nine days of November.
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Date Issued: 2020

Towards effective monitoring, control and surveillance policy and implementation in South Africa and its relevance to other Southern African States

Authors: Fikizolo, Lisolomzi Assaph
Date: 2021-10-29
Subjects: Fishery management Africa, Southern , Fisheries Monitoring Africa, Southern , Fishery policy Africa, Southern , Fishery law and legislation Africa, Southern , South Africa. Fisheries Management Branch
Language: English
Type: Doctoral theses , text
Identifier: http://hdl.handle.net/10962/190886 , vital:45038 , 10.21504/10962/190886
Description: The responsibility of Fisheries Governance Authorities (FGAs) is to ensure that there is sustainable utilisation and exploitation of marine living resources through effective Monitoring, Control and Surveillance (MCS). MCS is a mechanism used to implement agreed policies, plans and strategies for oceans and fisheries governance, and it is key to their successful implementation. In the continent, the African Union (AU), through its agencies, economic and regional structures encourage and supports national and regional MCS programs. South Africa is a SADC coastal State with a fisheries governance branch mandated to ensure sustainable marine living resources’ utilisation with support from a national MCS program. This support depends on the effectiveness of the current national MCS organisational structure, capacity, legislative and policy framework, as well as regional cooperation. In addition to an extensive literature review, this study developed a MCS framework, following international fisheries legislation and guidelines, for testing the South African MCS’ conformity to such a model. Furthermore, Namibia and Mozambique were included as examples of SADC coastal States to determine their responsiveness to regional cooperation and coordination. Based on the framework, a questionnaire with four parts, Part A: Background Information; Part B: Evaluation of MCS Enablers; Part C: Evaluation of an MCS system process and its effectiveness – reactive approach; and Part D: - proactive approach was developed to collect information. The data was analysed, using appropriate statistical methods to determine, against set characteristics, the level of information that the government respondents could provide to the research topic, and to determine the effectiveness of the South African MCS program. Limited information from Namibia and Mozambique showed readiness in their respective MCS programs for a regional MCS integrated approach, as is the case with South Africa, but there is no serious engagement to implement any regional MCS program. Results showed that the South African MCS program's effectiveness is generally adequate, but there are challenges with planning; financial resources; MCS equipment; stakeholder engagement processes, and governance. A primary recommendation from this study was that business plans, as utilised in the private sector, should be developed by South African Fisheries Governance Authority (FGA) to address MCS governance shortcomings as revealed by this study. A reconfiguration of the MCS organisational structure to include a resource mobilisation unit is considered necessary to effect the much needed improvements. , Thesis (PhD) -- Faculty of Science, Geography, 2021
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Date Issued: 2021-10-29

The identification of key vulnerability components within Solomon Islands coastal communities

Authors: Malherbe, Willem Stefanus
Date: 2017
Subjects: Solomon Islands -- Environmental conditions , Coastal ecology -- Solomon Islands , Island ecology -- Solomon Islands , Climatic changes -- Solomon Islands , Sociology, Urban -- Solomon Islands , Sociology, Rural -- Solomon Islands
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:21184 , http://hdl.handle.net/10962/6827
Description: The impacts of climate change are disproportionally felt across the planet, with small island developing states some of the countries most at risk. Furthermore, climate change may compound existing problems such as over harvested resources, leading to knock-on effects on national economies. Both direct and indirect stressors may impact communities differently based on their level of exposure to stressors, their intrinsic sensitivity to these stressors, and their ability to adapt to stressors. This study aims to answer the primary research question: Why are some communities more vulnerable than others? A vulnerability assessment is used to identify both vulnerable and non-vulnerable attributes of Solomon Islands’ communities. Surveys comprised a comprehensive questionnaire to draw inference on each vulnerability category; sensitivity, exposure and adaptive capacity, along with their various components and subcomponents. An analysis of household and community livelihood strategies was conducted to compliment vulnerability scores and provide a deeper understanding of livelihood practises. As is expected of small island states, exposure presents the biggest threat to coastal communities. Within this category, environmental changes and personal exposure from shoreline erosion and safety at sea provide evidence of high vulnerability. Within the sensitivity category, the cultural importance of fishing, as well as attachment to place and fishing, renders communities more vulnerable. Simultaneously, local ecological knowledge and economic dependence on resources other than fishing proved to be resilient attributes by decreasing vulnerability. Low vulnerability scores for the adaptive capacity category were achieved by communities where physical capital, such as community infrastructure, was evident. A lack of both institutional support and bridging of social capital were attributes which contributed to community vulnerability. This study has identified key attributes that have both positive and negative effects on the vulnerability of Solomon Islands communities. Having done this, I have also attempted to determine the drivers that render some attributes more vulnerable than others. It is acknowledged that the drivers of all key attributes of vulnerability is required to determine areas where adaptation plans will be most effective. Importantly, drivers of high vulnerability should not be considered as the primary focus of adaptation planning, but also the drivers of low vulnerability, such as community cohesion, which provide resilience within communities.
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Date Issued: 2017

The role of the deep spawning grounds in chokka squid (Loligo reynaudi d'orbigny, 1845) recruitment

Authors: Downey, Nicola Jean
Date: 2014
Subjects: Squids -- Spawning -- South Africa Squids -- Effect of temperature on -- South Africa Squids -- Embryos -- South Africa Squids -- South Africa -- Geographical distribution Loligo -- Research -- South Africa Loligo fisheries -- South Africa Recruitment (Population biology) -- South Africa
Language: English
Type: Thesis , Doctoral , PhD
Identifier: vital:5359 , http://hdl.handle.net/10962/d1011867
Description: It was previously thought that the South African chokka squid Loligo reynaudi is exclusively an inshore, shallow water spawner. Although spawning mostly within shallow bays (<60 m) the presence of squid eggs in trawls at depths up to 130 m indicates this species frequently makes use of deeper spawning areas on the mid-shelf. The extent of mid-shelf spawning (referred to as deep spawning) and the contribution to recruitment has yet to be assessed. Studies have shown mid-shelf bottom temperature to vary considerably from those inshore, suggesting chokka squid spawn in two very different oceanographic environments. Considering these apparent environmental differences, what leads to the mid-shelf environment becoming a suitable spawning habitat? Does a suitable benthic habitat, required for the attachment of egg pods, occur on the mid-shelf? These questions are not only important for determining the extent of deep spawning, but also to the understanding of factors “driving” deep spawning. The fate of deep spawned hatchlings is another unknown. It has been proposed that the main chokka squid inshore spawning grounds are positioned to exploit the net westward currents on the Eastern Agulhas Bank, i.e. paralarvae would be transported west from the hatching site to the cold ridge, an area of high primary and secondary productivity on the Central Agulhas Bank. This concept has come to be known as the Western Transport Hypothesis. Lagrangian ROMS-IBMs (regional ocean model system – individual-based model) predict the net westward transport of paralarvae from both the inshore and deep spawning grounds, to the cold ridge. These simulations were used to investigate the transport of hatchlings to the cold ridge feeding grounds before the exhaustion of yolk reserves. The fate of paralarvae on reaching the feeding grounds has not yet been investigated. This work has contributed new knowledge to our understanding of deep spawning and its role in recruitment. Specific aims of this study were to (1) determine the extent, range and importance of the deep spawning grounds relative to those inshore; (2) investigate the deep spawning ground habitat (Agulhas Bank mid-shelf) morphology and oceanographic environment; (3) determine the transport and survival of deep spawned hatchlings; and (4) investigate the origin and distribution of chokka squid paralarvae on the Agulhas Bank. The extent, depth range and importance of the deep spawning grounds, relative to those inshore was assessed using 23 years of demersal trawl survey data. Data for both the west and south coasts of South Africa were examined for egg capsules. No spawning was found on the west coast. Data showed that chokka squid preferred the Eastern Agulhas Bank for spawning. Spawning occurred not only inshore but also on the mid-shelf extending to depths of 270 m near the shelf edge. The majority of deep spawned eggs however, were found in the depth range 71-130 m. Squid egg density markedly decreased beyond 70 m, suggesting delineation between the inshore and deep spawning grounds. Total egg biomass calculations for depths shallower and deeper than 70 m indicated the coastal area to be strongly favoured, i.e. 82 vs. 18%. These results contest the commonly accepted notion that chokka squid is an inshore spawner and redefine the spawning grounds to extend across the shelf. Apart from an initial study investigating bottom temperature on the mid-shelf, very little is known about the deep spawning habitat. St Francis Bay, a commonly used spawning location, was chosen as a demonstration area for further study. The deep spawning grounds (71-130 m) were mapped and benthic habitat described from underwater video footage. A study investigating cross-shelf bottom conditions was undertaken off Thys Bay. CTD data were used to compare seasonal bottom temperature and oxygen on the St Francis Bay inshore and deep spawning grounds. Squid movement between the two spawning habitats was assessed using filament tagging. Predation and fishing pressure across the spawning grounds was reviewed. The mid-shelf benthic habitat was found to be similar to that inshore and available for spawning. Despite the generally colder bottom temperatures on the mid-shelf, this study showed that bottom temperature in deeper waters can at times be warmer than inshore. Although mid-shelf warming events lasted from a few hours to a number of days, they resulted in similar conditions to those on the inshore spawning grounds. It is likely these events act to expand or shift spawning habitat. The movement of squid between the two spawning habitats makes it possible for them to seek patches of warm bottom water with appropiate substrate. This suggests they are spawning habitat opportunists. Predation and fishing pressure appear to be higher on the inshore spawning grounds. It is feasible that this also forces spawners to seek out more favourable habitat offshore. An individual-based model was used to predict the fate of mid-shelf and inshore hatched paralarvae. Within the model, both the highly productive cold ridge and inshore spawning grounds were considered feeding or nursery areas. Paralarvae were released from six inshore and six deep spawning sites, spanning the coast between Port Alfred and Knysna. All paralarvae not reaching the feeding areas before the exhaustion of yolk-reserves (≤5 days), not retained within the feeding grounds (≥14 days), and not retained on the Agulhas Bank after exiting the feeding grounds were considered lost. This work illustrated the dependence of paralarval transport success on both spawning location and time of hatching, as established in earlier studies. The current IBM has expanded on initial work, emphasizing the importance of the cold ridge and inshore spawning grounds as nursery areas for deep and inshore spawned paralarvae, respectively. This work has highlighted the complex interactions between processes influencing recruitment variability for chokka squid. Possible relationships between periods of highest recruitment success and spawning peaks were identified for both spawning habitats. Based on the likely autumn increase in deep spawning off Tsitsikamma, and the beneficial currents during this period, it can be concluded deep spawning may at times contribute significantly to recruitment. This is particularly true for years where the cold ridge persists into winter. Data on chokka squid paralarval distribution are scarce. Paralarval distribution and abundance, in relation to Agulhas Bank oceanography, was investigated using bongo caught paralarvae and corresponding oceanographic data. Individual-based models (IBMs) were used to predict the origin or spawning site of the wild caught paralarvae, with reference to inshore versus deep spawning. Although failing to predict realistic points of origin, this study provided evidence to support a number of scenarios previously assumed to influence chokka squid recruitment. First is the possible influence of coastal upwelling on the retention, and hence spatial distribution, of paralarvae on the inshore spawning grounds. The second factor thought to impact recruitment is the loss of paralarvae from the Agulhas Bank ecosystem. This study confirmed the removal of paralarvae from the Eastern Agulhas Bank due to Agulhas Current boundary phenomena and resultant offshelf leakage. In addition, data suggested that the formation of the cold ridge could enhance retention on the Central Agulhas Bank, and so prevent offshelf leakage from the Central and Western Agulhas Bank. A synthesis of the main conclusions is presented. Implications of the findings and directions for future research are discussed.
Full Text:
Date Issued: 2014

A description of spatial and temporal aspects of the lifecycle of chokka squid Loligo vulgaris reynaudii on the inshore spawning grounds and Agulhas bank off the South Coast of South Africa

Authors: Olyott, Leonard James Henry
Date: 2002
Subjects: Squids -- South Africa , Loliginidae -- South Africa
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5253 , http://hdl.handle.net/10962/d1005096 , Squids -- South Africa , Loliginidae -- South Africa
Description: The chokka squid, Loligo vulgaris reynaudii, is a commercially important species supporting a large, high-value export fishery for South Africa. This study reviewed its population dynamics and reproductive biology. Biological information collected on biannual research cruises from September 1986 to April 1999 on the Agulhas Bank as well as information from commercial vessels operating in the inshore environment collected between April 1988 and July 1989 and again between June 1999 and May 2000 were analysed. Size ranges of juveniles, subadults and adults were calculated and used to determine seasonal distribution and abundance patterns. Based on Gonadosomatic Indices (GSI) and percentages of mature squid in each month, two peak reproductive seasons in summer and winter were identified although mature squid were present all year round. Seasonal peaks in sex ratio were also apparent with males outnumbering females by up to 4:1 in the peak-breeding season. The size at which squid matured, demonstrated both spatial and temporal patterns. Squid caught in spring matured at a smaller size than squid caught in autumn and at successively smaller sizes from west to east across the Agulhas Bank. Size at maturity was highly variable especially in males where “sneaker males” were evident in both seasons. Length-to-weight linear regression revealed significant differences between maturity stages and between sexes. Females demonstrated steeper length-to-weight regression slopes than males in the peak-breeding seasons. Aspects of squid biology pertinent to fishery management were highlighted as well as potential areas where research should be directed in order to develop future stock assessment models.
Full Text:
Date Issued: 2002

Uncoupling the exploitation and climate change effects on the biology of Cape monkfish, Lophius vomerinus Valenciennes 1837 in Namibia

Authors: Erasmus, Victoria Ndinelago
Date: 2021-10-29
Subjects: Lophius Namibia , Lophius Climatic factors Namibia , Lophius Effect of human beings on Namibia , Lophius Food Namibia , Lophius Reproduction Namibia , Lophius Age Namibia , Lophius Growth Namibia , Lophius Habitat Namibia , Lophius Conservation Namibia , Fisheries Namibia , Overfishing Namibia , Fishery management Namibia , Lophius vomerinus (Valenciennes, 1837) , Cape monkfish
Language: English
Type: Doctoral theses , text
Identifier: http://hdl.handle.net/10962/188329 , vital:44744 , 10.21504/10962/188329
Description: Cape monkfish, Lophius vomerinus Valenciennes 1837, has supported the Namibian fishing industry for decades, historically as by-catch and recently as a target species. This species is also an important predator in this region. With increasing levels of exploitation and unprecedented climate change, an understanding of the changes in the long-term biological parameters of this species is critical. To date, there has been a scarcity of spatio-temporal studies that have examined and compared the biological aspects of Cape monkfish in relation to climate change and exploitation pressure. Investigations into changes in feeding habits, reproduction strategy, age and growth can provide valuable information for the sustainable management and conservation of this species. This thesis aimed to improve our understanding of the impacts of exploitation and climate variability on the biological parameters of Cape monkfish in the Namibian marine waters, thereby contributing to efforts directed at sustainable harvest and management of this resource. This was achieved through temporal and spatial comparisons of feeding, reproductive scope, age and growth, and catch statistics. The study used data collected during the monkfish swept-area biomass surveys of 2001–2005 and for 2007–2018, hake (deep-water hake Merluccius paradoxus Franca 1960 and shallow-water hake M. capensis Castelnau 1861) swept-area biomass surveys of 2017 and 2019, port sampling programme data collected from April 2014 to December 2019, and monkfish commercial fishing activities collected between April 2001 and December 2019. Based on historical feeding data (1986 – 1987) and contemporary feeding data (2015-2018), Cape monkfish feeds on a variety of prey species from seven groups: Teleost, Cephalopoda, Crustacea, Echinoidea, Elasmobranchii, Gastropod and Porifera. The diet was characterised by a high prevalence of empty stomachs (43.9%), showing low feeding intensity, but most prevalent in juveniles (52.9%). Although the diet composition varied at different life stages, Teleosts (especially deep-water hake Merluccius paradoxus Franca 1960) were the main constituents of the diet for all size classes as per the Index of Relative Importance (%IRI). The results highlight the particular importance of the deep-water hake M. paradoxus (by %IRI) in the diet of Cape monkfish across all size classes. There is a clear dominance of hake in both studies, which means that any overexploitation or climate-driven population decline in hake will most likely have an impact on Cape monkfish. Feeding composition was dependent on the season (p < 0.05), with the type and quantity of prey ingested changing seasonally, showing the ability of Cape monkfish to adjust its diet, depending on possible environmental parameters which consequently influence prey availability. In general, the spatial and temporal variability of the main prey items suggests that the species is highly opportunistic with a broad trophic adaptability. Comparison of historical and contemporary stomach content data indicates that Cape monkfish appear to have changed their diet, probably reflecting the availability of forage species over time and space, possibly due to climate change, fishing pressure, or both. The broad trophic adaptability for Cape monkfish highlights their adaptive potential to increasing anthropogenic stressors such as climate change. However, the dominance of the commercially important deep-water hake, M. paradoxus, in the diet during contemporary times highlights that complex trophic interactions may play a role in altering the northern Benguela fisheries. The general male to female sex ratio was measured at 1:1.67, with significant variation across depth, size class, and year (p < 0.05). Comparison of length at 50% maturity (L50) for Cape monkfish between historical (2004–2006) and contemporary time (2015–2019) showed no significant differences in both sexes, with no significant changes in the L50 for females (χ2 = 1.53, df = 1, p = 0.2154), and males (χ2 = 0.41, df = 1, p = 0.5204) between the two periods. The monthly gonadosomatic index (GSI) showed that Cape monkfish spawn throughout the year with peaks between July and September for females and August for males, similar to those observed 20 years ago. Spawning hotspot areas were identified and were consistently located between 22⁰ and 25⁰S in deeper water (> 250 m) for the 2001–2018 time series. Comparison of the contemporary (2015–2019) proportions of developing, ripe and spent gonads to the historical study data (1996 – 2000) show minimal differences. Ripe ovaries capable of spawning (Stage IV) were dominant in July (23.8%) and August (26.2%), while ripe testes were prevalent in April (52.5%) and November (28.5%). The discovery of the veil (a gelatinous, flat ribbon structure containing individual eggs) off Namibia for the first time (during this study) is a significant because this result provides important reproduction activities information of this species, which were never recorded off Namibia. The location where the veil was discovered, off Swakopmund (22⁰30'S, 13⁰25'E), provides further evidence of the identified spawning hotspot areas, this location is also identified as a monkfish consecutive hotspot fishing area. The ages, growth rates, and length-weight relationships were compared between fish collected during monkfish commercial fishing activities between 1996 and 1998 (Period 1) and during monkfish routine monitoring surveys from 2014 to 2016 (Period 2). A total of 607 (size range: 9–96 cm total length (TL)) and 852 (size range: 9–96 cm TL) Cape monkfish were aged by reading sectioned illicia, during Periods 1 and 2, respectively. The length-weight relationships were W = 0.012L3.035 (r2 = 0.98) and W = 0.014L 2.989 (r2 = 0.98) for females and males, respectively, during Period 1, and W = 0.01L2.97 (r2 = 0.98) and W = 0.01L 3.03 (r2 = 0.98) for females and males, respectively, in Period 2. The growth of Cape monkfish (in cm) for combined sexes was described by Lt = 94(1 − e(−0.10(t−(-0.31))) in Period 1 and Lt = 98(1 − e(−0.10(t−(-0.33))) in Period 2. Females grew significantly faster during Period 1 (LRT results from Maartens et al., 1999), while male and female growth was not significantly different during Period 2 (F = 0.65, p = 0.58). There were no significant differences between the male and female growth curve in Period 2 (F = 0.65, p = 0.58). Although the growth curves are similar between Period 1 and Period 2, the larger fish are in Period 2 are lighter than those in Period 1. This finding is important to the monkfish fishing industry because fish is sold by weight. This finding may suggest that although the fish grow similarly by length, changes in the environmental conditions may have resulted in a reduced condition of the fish. In terms of mean age, the historical Period 1 had a slightly lower mean age of 4.40 compared with a mean age of 5.49 during Period 2. Slight differences were also observed in the age structure between the two periods, with 2-year-olds (20.3%) the most abundant age class in the historical period while 5-year-old fish (18.3%) were most abundant in Period 2. Although the spatial distribution of the catch was not available for Period 1, 0-year-old fish were distributed from 22⁰ to 24⁰S, and 25⁰ to 26⁰S in shallower waters of 166–290 m during Period 2. Only fish between 5 and 16 years old were found off the documented historical nursery area off 28º S. The similar growth curves and spatial overlap of nursery habitats between Period 1 and Period 2 suggest that Cape monkfish may be fairly resilient to the rapid environmental change reported in this region and to the extensive levels of exploitation for the species. However, the recent spatial shifts in the nursery areas are sensitive to disturbance and may indicate that these changes could be having an impact on the early life stages of the species. Continued monitoring may be necessary to understand the consequences of these spatial shifts for the age and growth and resilience of the species. Analysis of the overall spatial and temporal catches of monkfish (both Cape monkfish and shortspine African monkfish) off Namibia between 1998 and 2018 identified noticeable spatio-temporal trends. The pattern of fishing activities for Cape monkfish is heterogeneous, with identified ‘hotspots’ in specific areas. Of particular importance is the consecutive hotspot, between 1998 to 2018 for monkfish fishing activities between 25⁰ and 26⁰ S. The kernel density analysis indicated that the area around 24⁰S, and between 26º and 27 ⁰S, between Walvis Bay and Lüderitz, had the highest total catch densities (~300 kg/km2), suggesting that this is the core of the stock abundance. Annual monkfish catches have fluctuated since the inception of the fishery in 1994, with a drastic decline in the catch recorded after 2003 through to 2018. Generally, there has been an underutilisation of the total allowable catch (TAC) for most of the years. The decrease in catches and the underutilisation of the TAC might be indicative of the reduction in the stock abundance. However, external factors such as lack of capacity of the fishing industry and the administration can contribute to underutilisation of TAC. Basic regression analysis between total monthly catches and monthly sea surface temperature (SST) yielded low r-squared values indicate that in all three grids, only ~ 1% of the variation is explained between SST and total monkfish catches in these areas. The most prominent points to consider from this study are the results of the comparative feeding study (Chapter 3), reproductive indicators (Chapter 4) and age and growth (Chapter 5). Certainly, there have been changes in feeding, demography, and distribution of the species in the last two decades – climate-driven changes were recorded in the feeding habits of Cape monkfish, spatially and temporally – but despite the changes in prey species composition, distribution and abundance in various habits and periods, Cape monkfish was able to switch prey species, reflecting wide trophic adaptability. The dominance of M. paradoxus at all size classes in all analysed habitats is a significant result because. The peak spawning period has remained the same between July and September, as previously reported in Period 1. The consecutive spawning hotspots were identified in the areas between 22º and 25ºS. From a fisheries management perspective, the spawning ground and spawning season should be protected (by means of closure). The evidence of changes in length at 50% maturity presented in this study hints at both climate change and extensive exploitation pressure. The discovery of the veil for the first time in this study is very important; however, it might be sampling related and not driven by climate or exploitation pressure. Finally, the change in the Cape monkfish distribution discussed in Chapter 6 may be attributed to a shift in the distribution or fishing effort as a consequence of shallow water depletion. , Thesis (PhD) -- Faculty of Science, Ichthyology and Fisheries Science, 2021
Full Text:
Date Issued: 2021-10-29

The geographic stock structure of chokka squid, Loligo Reynaudi, and its implications for management of the fishery

Authors: Van der Vyver, Johan Samuel Frederik
Date: 2014
Subjects: Squids -- Geographical distribution , Loligo fisheries -- Africa, Southern , Fishery management -- Africa, Southern , Squids -- Africa, Southern , Squid fisheries -- Africa, Southern , Loliginidae -- Africa, Southern , Fish stock assessment
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5363 , http://hdl.handle.net/10962/d1012973
Description: It is currently hypothesised that the chokka squid (Loligo reynaudi) consist of a single stock. This was tested through a spatial comparison of the morphology of this species. Forty three morphometric characters were measured from 1079 chokka squid collected from three regions: the south coast of South Africa, the west coast of South Africa, and southern Angola. While no significant differences were found for the hard body parts, results from discriminant function analyses showed the soft body morphometric characters from each of the three regions differed, with an overall correct classification rate of 100% for males and 99% for females in all three regions. Due to the existing model being used to assess the resource currently being updated it was not feasible to apply this model to the area-disaggregated data from this study. Rather, the CPUE trends and catches from the area-disaggregated data were compared against those of the area-aggregated data, as a first attempt to discern any appreciable differences which would suggest the use of disaggregated data in future assessments. Both the trawl and jig CPUE trends from the area-disaggregated analysis differed only slightly from those of the area-aggregated data. Similarly, the spring and autumn biomass trends for the main spawning area (east of 22°E) followed the same trends as for the full area. It is therefore concluded that there is currently no need to assess the resource on an area-disaggregated basis.
Full Text:
Date Issued: 2014

Empirical studies of fish movement behaviour and their application in spatially explicit models for marine conservation

Authors: Kerwath, Sven Ebo
Date: 2006
Subjects: Fishing -- South Africa Fishes -- Behavior -- South Africa Fish tagging Marine parks and reserves -- South Africa Marine resources conservation Pomadasys -- South Africa Reef fishes -- South Africa
Language: English
Type: Thesis , Doctoral , PhD
Identifier: vital:5277 , http://hdl.handle.net/10962/d1005121
Description: This thesis investigates the movement behaviour of South African two coastal fish species and evaluates the effectiveness of marine protected areas (MPAs) in their protection and management. Its primary focus is on resolving the movement patterns of roman Chrysoblephus laticeps (Sparidae) in and around the Goukamma and Castle Rock MPAs in the Western Cape province of South Africa. A pilot study of the methodology investigated the movement behaviour of spotted grunter Pomadasys commersonnii (Haemulidae) in the sheltered East Kleinmonde Estuary in the Eastern Cape province. The application of different tagging methods was tested in a controlled tank experiment. Tagged roman were monitored over a 198-day period. Barbed dart, t-bar anchor and Visible Implanted Fluorescent Elastomer (VIFE) tags were compared. Application techniques and underwater visibility of VIFE tags were tested on roman and on fransmadam Boobsoidia inornata in a pilot study. Needles of gauge 25 were found to be optimal for VIFE tag application. Whereas VIFE tagging caused fin rot in fransmadam, it had no negative effect on roman. VIFE tagged fish could be identified by divers from a distance of three metres under ambient light in an observation tank in five metres water depth. There was no significant difference in growth rate between groups of roman with different tags and controls after 198 days. High tag loss rates were experienced for barbed dart and t-bar anchor tags, although barbed dart tags performed better than t-bar anchor tags. Although some of the VIFE marks had deteriorated, all VIFE tagged fish were individually recognised at the end of the study. Conventional dart and VIFE tags are feasible methods to tag roman. However, the high tag loss rate of conventional tags must be taken into account in the design of a tagging study. Previous mark and recapture studies on roman are beset with a number of problems. Poor experimental design and low precision of capture positions resulted in equivocal results of limited value. A tagging experiment was designed to eliminate ambiguity in data interpretation and to produce a dataset that could be used to model roman residency and dispersal. A combination of conventional barbed dart tags and Visible Implanted Fluorescent Elastomer tags was used to tag roman in the Goukamma Marine Protected Area (GMPA) on the temperate South African south coast. Sixty one percent of roman were recaptured within 50 m of the tagging position. A small proportion moved considerable distances of up to four kilometres. The extent of these movements was not dependent on fish size or sex. Data from this experiment and from a previous tagging study in the Tsitsikamma National Park (TNP) were used to model the resident behaviour of roman. The model suggests a probability of 91% (GMPA) and 94% (TNP) of residency within a 10000 m² cell. This result suggests that individual roman will benefit from protection in small MPAs. A different experimental approach was required to investigate the exact home range of this species. Firstly the feasibility of using acoustic telemetry to study the movement of coastal fish in South Africa was investigated. The telemetry equipment comprised two VEMCO V8 transmitters and a VEMCO VR60 receiver linked to a directional hydrophone. A tank experiment was conducted to examine the effects of the transmitter implantation. A tracking experiment was conducted on spotted grunter Pomadasys commersonnii in the East Kleinmonde Estuary. Operated fish recovered quickly and, with respect to swimming behaviour and growth rates, no differences were found between fish with implants and controls. The maximum detection range in the estuary was 400 m. Interference between different transmitter frequencies was negligible. Transmitter location recordings were found to be accurate within five metres. Two fish were tracked over a seven-day period. The fish preferred the lower reaches of the estuary where they made repeated and prolonged use of specific areas. The success of the initial experiments allowed this method to be used to investigate the spatial utilisation and activity patterns of roman Chrysoblephus laticeps. Surgically implanted VEMCO V8, V13 and V16 transmitters were used to track 13 roman inside the Castle Rock MPA in False Bay. Transmitters implanted into C. laticeps in tanks had no apparent effects on growth and physiology. Manual boatand diver-based tracking experiments covered a 17-month period. A VEMCO VRAP radio acoustic positioning system was used over two one-month periods during and after the spawning season of roman. Analysis of data using a 95% fixed kernel algorithm suggests that roman are resident throughout their adult life, occupying home ranges between 1000 and 3000 m². Activity was lower at night. During periods of cold-water upwelling, fish retreated into caves. During the spawning season, females extended their home ranges, possibly to mate with different males. These results confirm that this species is well suited for protection and management with small MPAs. The effect of two MPAs on the South African south coast on the population of C. laticeps was simulated with a spatially explicit individual based model (IBM). Life history parameters determined in recent studies and the effect of fishing on the size of sex change was taken into account. Fish densities and size frequencies were based on recent underwater visual census. The distribution of suitable habitat in the study areas was also incorporated. The results show a rapid recovery of the fish size frequency spectrum and sex ratio to pre-exploitation levels inside both MPAs. Little 'spillover' of fish into the fished areas occurred resulting in negligible improvement of catches. The results suggest that for resident species like roman, even small MPAs offer sufficient protection.
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Date Issued: 2006

The assessment and management of bycatch and discards in the South African demersal trawl fishery

Authors: Walmsley, Sarah Ann
Date: 2005
Subjects: Bycatches (Fisheries) Fishery management -- South Africa Fisheries -- South Africa Trawls and trawling -- South Africa
Language: English
Type: Thesis , Doctoral , PhD
Identifier: vital:5228 , http://hdl.handle.net/10962/d1005071
Description: Over the past few decades it has become recognised that an ecosystem approach is required to manage world fisheries. Management strategies must ensure that non-target (bycatch) as well as target catches are sustainable. To achieve this, detailed commercial catch and biological information is required. The composition of catches made by trawlers operating off the south and west coasts of South Africa was investigated. Distinct fishing areas were identified on each coast, based on target species and fishing depth. Catch composition differed markedly among the areas defined. Although hake Merluccius sp. dominated South Coast catches, a large proportion of the catch was composed of bycatch. On the West Coast, hake dominated catches and this domination increased with increasing depth. On both coasts approximately 90% of the observed nominal catch was processed and landed. Estimates of annual discards suggested that the fishery discarded 38 thousand tons of fish per annum (16% of the nominal trawl catch). The data also indicated that hake discarding, the capture of linefish and the increased targeting of high value species might be cause for concern. Spatial analysis indicated that a variety of factors such as trawling position, catch size and catch composition affects bycatch dynamics. The monkfish Lophius vomerinus is a common bycatch species that has been increasingly targeted by demersal trawlers. This study showed that L. vomerinus is a slow-growing, long-lived species (West Coast males L∞ = 68.50cm TL, t₀ = -1.69yr, K = 0.10yr⁻¹; West Coast females L∞ = 110.23cm TL, t₀ = -1.54yr, K = 0.05yr⁻¹; South Coast sexes combined L∞ = 70.12cm TL, t₀ = - 0.80yr, K = 0.11yr⁻¹), that matures at approximately 6 years of age. These traits could have serious management implications for the species. Per-recruit analysis suggested that the stock might be overexploited, although further investigation is required to confirm this. Solutions were suggested for each of the concerns raised, taking cognisance of the differences observed between the South and West Coasts and the economic dependence of South Coast companies on bycatch. The needs of future research were considered.
Full Text:
Date Issued: 2005

Systematic marine spatial planning and monitoring in a data poor environment: a case study of Algoa Bay, South Africa

Authors: Chalmers, Russell
Date: 2012
Subjects: Spatial ecology -- South Africa -- Algoa Bay , Coastal zone management -- South Africa -- Algoa Bay
Language: English
Type: Thesis , Doctoral , PhD
Identifier: vital:5373 , http://hdl.handle.net/10962/d1015695
Description: Globally the failure of traditional fisheries management approaches is evident through the increasing number of overexploited or depleted marine stocks. Past sectoral management has failed to address cumulative impacts of fisheries activities on ecosystem health. Ecosystem based approaches have been advocated as a viable alternative for sustainable management of marine ecosystems as they present a holistic and precautionary approach, which integrates management of multiple activities with that of maintaining ecological health. Although conceptually advanced, implementation has been poor due to the complexities of competing ecological and socio-economic management objectives. Marine spatial planning can facilitate the implementation of ecosystem based management as it is able to address the spatial heterogeneity of biological communities and anthropogenic activities. Ecosystem based management approaches aim to address the full range of anthropogenic drivers on the marine environment, including but not limited to fisheries, tourism, coastal development, and land and marine based pollution sources amongst others. Fisheries activities have a direct impact on the local marine environment and were therefore the focus of this study which forms a starting point for implementing ecosystem based management in Algoa Bay. It is envisaged that future research will build on this foundation and include additional anthropogenic drivers into the management and monitoring strategies developed in this study in order to achieve a truly holistic ecosystem approach to management in Algoa Bay. Algoa Bay is situated centrally within the warm-temperate Agulhas bioregion along the east coast of South Africa and is the largest and best formed logarithmic spiral bay along this section of coastline. A large city, two commercial ports and several coastal settlements are located within Algoa Bay and a wide range of marine based activities occur within the area. A large section of the coastline is proclaimed as a National Park yet only two small offshore marine areas are formally protected. The development of a large marine protected area (MPA) adjoining the terrestrial section was proposed in the mid-1990s but a lack of adequate spatial data with which to quantify the fishery costs and conservation benefits led to wide scale public opposition and halted the declaration process. The primary goal of this study was to obtain and analyse baseline data to understand spatial and temporal trends in the distribution and abundance of fish populations and fisheries activities in order to develop a spatial framework for marine conservation and management in a data limited situation using Algoa Bay, South Africa as a case study. Furthermore, it aims to contribute to the development of a monitoring framework to evaluate the success of implementation and the resultant changes in biological and socio-economic environments. This information will be used to re-initiate the stakeholder engagement process in the future.
Full Text:
Date Issued: 2012

The biology of two important by-catch skate species on the Agulhas Bank, South Africa

Authors: Walmsley, Sarah Ann
Date: 1997
Subjects: Skates (Fishes) -- South Africa -- Physiology
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5240 , http://hdl.handle.net/10962/d1005083 , Skates (Fishes) -- South Africa -- Physiology
Description: Members of the family Rajidae are common components of the demersal trawl fishery, contributing around 1% to the total catch. However, apart from a single species all South African rajids are currently discarded. With demands for new protein sources ever-increasing, it is possible that currently underutilised species, such as the skates will be utilized to a greater extent. Raja wallacei and R.pullopunctata are common trawler by-catch species, ranging along most of the South African coast. The current study allred to further knowledge on the population biology of both species through age and growth, reproductive and feeding studies. The study also allred to assess whether any of the South African skate species show the potential for utilization as a food source. Band counts of vertebral centra were used to determine growth parameters and generate growth curves for males and females of both species. Growth was significantly different between the sexes. In both cases, females grew slower than males but reached a greater asymptotic disc width. As with other elasmobranchs, R.wallacei and R.pullopunctata are long-lived and slow growing. As with all other skates, the study species are oviparous laying large, yolked eggs in tough, leathery cases on the sea bed. The onset of maturity occurs at a large size (approximately 400mm disc width (10-11 years of age) for R.wallacei and 600mm disc width (12-13 years of age) for Rpullopunctata) and is very rapid. The oldest R.wallacei and R.pullopunctata observed were 16 and 18 years of age, respectively. No distinct breeding season was determined and no nursery areas were observed. A large proportion of individuals, especially R.pullopunctata was immature. Both species fed primarily on crustaceans and teleosts with an ontogenetic shift in diet from mysids, amphipods, isopods and bregmatocerids to larger Gnathophis sp., Mursia cristimanus and carid shrimps. Large discrepancies were seen in the diet of animals spatially, temporally and between research and commercially-caught animals. Disc-width frequency data was limited but suggested that both species show preference for depths of 100-300m. Size distribution did not appear to be affected by depth, although the data set was limited. A paucity of large individuals in the catch may indicate that stocks are suffering from growth overfishing by trawling operations. Historical and observer data showed that although skates are common components of the by-catch, the potential for greater use is limited. The biscuit skate, R.straeleni, on the west coast is the only species that could be better utilized. If skates are treated as a single group the potential is increased but this causes problems in assessing stocks.
Full Text:
Date Issued: 1997

The influence of environmental variability on the catch of chokka, Loligo reynaudii, off the coast of South Africa

Authors: Joyner, Jessica Mary
Date: 2017
Subjects: Loligo reynaudii , Loligo fisheries -- South Africa , Squid fisheries -- South Africa , Loligo fisheries -- Environmental aspects -- South Africa , Squid fisheries -- Environmental aspects - South Africa
Language: English
Type: Thesis , Masters , MSc
Identifier: http://hdl.handle.net/10962/32130 , vital:24013
Description: Globally, cephalopod fisheries are being relied on more heavily due to the depletion of longer-lived teleost species. The South African chokka squid (Loligo reynaudii) fishery is a case in point. Although previously numerous squid were often caught as bycatch, the fishery has officially been in place since 1985. Since the inception of the chokka fishery in South Africa, several studies have investigated the relationship between environmental drivers and annual chokka squid catch, with varying degrees of success. Recently, in 2013, chokka squid catches hit a record low, prompting resurgence in the topic of the squid environment-catch relationship. This study was initiated in an attempt to provide a quantitative relationship between the chokka squid catch and environmental variability, and to build a predictive model that could be used in fisheries management strategies. Historical data were obtained from various sources and included the mean and standard deviation in ocean bottom temperature; the mean and standard deviation in sea surface temperature; the maximum and minimum as well as the variation in wind speed; the mean, predominant and standard deviation in wind direction; the mean and standard deviation in atmospheric pressure; the mean chlorophyll concentration; the number of upwelling events; the hours of easterly winds blowing per day; and two large variation-in-climate indices, namely, the oceanic Nino index and the Antarctic Oscillation index. The monthly catch data were also provided. These data were initially analysed for inter-annual and intra-annual cyclic trends and followed by analysis of the delay in response of catch to the environmental variables, anticipating some impact on the different stages of the chokka life cycle. These lagged data were incorporated into a negative binomial generalised linear model, as well as a generalised additive model, which revealed a strong relationship (r²=0.707) between the catch and environmental variability. The inclusion of all the parameters was necessary; however, the mean bottom temperature and the standard deviation in sea surface temperature were the only parameters that had a significant effect on the catch. These results were used to build a predictive model that indicated that, although the relationship was strong, the ability of the model to predict catch was weak, particularly from the year 2005 onwards.
Full Text:
Date Issued: 2017

An investigation into the influence of the environment on spawning aggregations and jig catches of chokka squid Loligo Vulgaris reynaudii off the south coast of South Africa

Authors: Schön, Pieter-Jan
Date: 2000
Subjects: Squids -- Spawning , Squid fisheries -- South Africa , Squids , Shellfish fisheries -- South Africa
Language: English
Type: Thesis , Masters , MSc
Identifier: vital:5378 , http://hdl.handle.net/10962/d1016369
Description: Erratic and highly variable catches in the South African chokka squid Loligo vulgaris reynaudii fishery, cause socio-economic hardship for the industry and uncertainty for resource managers. Catch forecasting can reduce this problem as it is believed that catch variability is strongly influenced by environmental factors. In this study, data were collected at varying temporal and spatial scales. Data for the hourly time-scale study were collected from 1996-1998, aboard commercial vessels, whilst for the longer time-scales, data were extracted for Kromme Bay (a single fishing area) from existing databases (1991-1998) that were comprised of compulsory catch returns and oceanographic data. The environment-catch relationship for chokka squid on the inshore spawning grounds was then investigated using multiple correlation and regression analysis, analysis of variance, contingency table analysis and cross-correlation statistical techniques. This simple, direct, 'black box' statistical approach was relatively successful in developing a predictive capability. On a short time-scale (hourly), the regression model accounted for 32% of the variability in catch, with turbidity the main determinant (13%). On a daily monthly time-scale, the best prediction model was on a monthly scale, accounting for 40% of the variability in catch. The principal determinant, bottom temperature anomaly (11 %), was found to lag one month forward. Seasonal and diel catch variations induced changes in the relative importance of turbidity, water temperature and wind direction on catches. A strong, positive relationship was found between easterly winds (which cause upwelling) and catch, particularly in summer. Catch rates, however, decreased with an increase in turbidity. The correlation between temperature and catch was generally negative, however, higher catches were associated with a temperature range of 13-18°C. Highest catch rates were associated with easterly winds, zero turbidity conditions and sea surface temperatures from 15.0-16.9°C. Selected case studies (in situ observations) suggested that upwelling and turbidity events act as environmental triggers for the initiation or termination of the spawning process, respectively. A holistic approach is required to improve predictive capability of chokka squid abundance. Although short-term predictability remains essential (i.e. hourly-scale), future research should concentrate on long-term prediction models (e.g., monthly time-scales) involving greater spatial variation, which are the most important for management.
Full Text:
Date Issued: 2000

An assessment of the small-scale fisheries in the Kogelberg district of the Western Cape, South Africa

Authors: Jordan, Tia
Date: 2016
Language: English
Type: Thesis , Masters , MSc
Identifier: http://hdl.handle.net/10962/997 , vital:20011
Description: Small-scale fisheries play a critical role in communities by contributing to food security, poverty alleviation and source of income. The study focused on the Kleinmond small-scale fishery and estimated the current economic value of the fishery as well as exploring the potential for increasing this and also whether it is being used in a way that ensures sustainable harvesting of the marine resources. It was important to evaluate the ecological, economic and social dimensions of the fishing community in order to address the problems currently facing the community. The study draws on previous research done in the Kleinmond area. Data were collected to update and complement previous research and addresses current research. In order to investigate the fisheries catch contribution in the area, data were obtained from the Department of Agriculture, Forestry and Fisheries. Three different questionnaires were developed and conducted in face-to-face formal and informal interviews with the various stakeholders (n=42) in the value-chain. Interviews were also conducted telephonically with other stakeholders and a focus group was formed to supplement previous available data. Simple economic models were developed for the fisheries working from the Kleinmond harbour, which were used to estimate the gross and net economic value of catches for individual right-holders, as well as the Kleinmond area as a whole. The economic models used in this study showed that the West Coast rock lobster Jasus lalandii, fishery was the primary source of income for small-scale fishers. This was due to the rock lobsters being sold to the export market as a high-valued commodity, whereas the linefish were sold to the local market as a lower-valued commodity. However, linefish were found to be more of a commodity to the community as a portion would be retained for personal consumption. The linefishers were concerned in that over the past couple of years, snoek Thrysites atun have been absent the Kleinmond area, resulting in and the fishing effort shifting to a resident species Cape bream Pachymetopon blochii. Whereas West Coast rock lobster were considered to be harvested sustainably under the current total allowable catch strategy, there was concern for the future of the fishery because of the occurrence of illegal fishing, both locally and nationally. Small-scale fisheries in the Kleinmond community are largely dependent on fishing resources, even though the industry is only marginally profitable. Future management measures should concentrate on optimising the value-chain to provide both sustainability for the resources and improve the livelihoods of the community.
Full Text:
Date Issued: 2016

Showing items 1 - 20 of 23

Towards a new approach for coastal governance with an assessment of the Plettenberg Bay shore-based linefishery

Microsatellite and morphometric analysis of chokka squid (Loligo reynaudi) from different spawning aggregations around the South African coast

Assessment of the effect of Goukamma Marine Protected Area on community structure and fishery dynamics

Population genomics analysis of yellowfin tuna Thunnus albacares off South Africa reveals need for a shifted management boundary

Quantifying the ecological and socioeconomic implications of a recovery/collapse of South Africa’s West Coast rock lobster fishery

Optimisation of a sampling protocol for long-term monitoring of temperate reef fishes

Age of squid Loligo reynaudii d’Orbigny, 1845, and its possible use to test effectiveness of the closed season in protecting this resource

Towards effective monitoring, control and surveillance policy and implementation in South Africa and its relevance to other Southern African States

The identification of key vulnerability components within Solomon Islands coastal communities

The role of the deep spawning grounds in chokka squid (Loligo reynaudi d'orbigny, 1845) recruitment

A description of spatial and temporal aspects of the lifecycle of chokka squid Loligo vulgaris reynaudii on the inshore spawning grounds and Agulhas bank off the South Coast of South Africa

Uncoupling the exploitation and climate change effects on the biology of Cape monkfish, Lophius vomerinus Valenciennes 1837 in Namibia

The geographic stock structure of chokka squid, Loligo Reynaudi, and its implications for management of the fishery

Empirical studies of fish movement behaviour and their application in spatially explicit models for marine conservation

The assessment and management of bycatch and discards in the South African demersal trawl fishery

Systematic marine spatial planning and monitoring in a data poor environment: a case study of Algoa Bay, South Africa

The biology of two important by-catch skate species on the Agulhas Bank, South Africa

The influence of environmental variability on the catch of chokka, Loligo reynaudii, off the coast of South Africa

An investigation into the influence of the environment on spawning aggregations and jig catches of chokka squid Loligo Vulgaris reynaudii off the south coast of South Africa

An assessment of the small-scale fisheries in the Kogelberg district of the Western Cape, South Africa