Plant community distribution and diversity, and threats to vegetation of the Kromme River peat basins, Eastern Cape Province, South Africa
- Authors: Nsor, Collins Ayine
- Date: 2008
- Subjects: Kromme River (Eastern Cape, South Africa) , Peatland ecology -- South Africa -- Eastern Cape , Plant diversity conservation -- South Africa -- Eastern Cape , Peatland plants -- South Africa -- Eastern Cape , Peatlands -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Wetland conservation -- South Africa -- Eastern Cape , Ecosystem management -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4760 , http://hdl.handle.net/10962/d1007151 , Kromme River (Eastern Cape, South Africa) , Peatland ecology -- South Africa -- Eastern Cape , Plant diversity conservation -- South Africa -- Eastern Cape , Peatland plants -- South Africa -- Eastern Cape , Peatlands -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Wetland conservation -- South Africa -- Eastern Cape , Ecosystem management -- South Africa -- Eastern Cape
- Description: This study examined the current plant diversity status and the impact of drivers of change on the peat basins of the Kromme River peatland. It was conducted at six sites over sixty one years in the Eastern Cape Province of South Africa. I reviewed the rapid habitat and biodiversity loss of wetlands globally and discussed the distribution of wetlands and specifically peatlands in South Africa. Plant species diversity was assessed using Modified- Whittaker plots. The influence of environmental variables on floristic composition and distribution was investigated using ordination techniques (DCA and CCA). Land use dynamics were assessed by applying GIS techniques on orthorectified aerial images. Six different peat basins were subjectively classified into good, medium and poor condition peat basins. The good condition peat basin (Krugersland) was the most diverse in plant species (4.1 Shannon-Weiner’s index) (p> 0.20; F = 11.04; df = 2), with the highest mean number of plant species (32.5 ± 3.4). This was followed by the medium condition class (Kammiesbos) (26.5 ± 9.0) and poor condition class (Companjesdrift) (22.5 ± 8.9). On average, species composition was not evenly distributed across the peat basins (p> 0.21; F = 0.94; df = 2), since 77.8% of the Shannon-Weiner evenness index obtained were less than one. However, there were variations in plant species richness across six peat basins as confirmed by Oneway ANOVA test (p= 0.0008, F = 1241.6, df = 4). Key environmental variables that influenced plant species distribution and structure were erosion and grazing intensity, potassium, phosphorus, soil pH and calcium. Total species variance accounted for in the first two axes for ground cover and plant height were 40.7% and 56.4% respectively. Alien species (e.g. Acacia mearnsii and Conyza scabrida) were common in degraded peat basins, whereas good condition peat basins supported indigenous species (e.g., Cyperus denudatus, Chrysanthemoides monolifera and Digitaria eriantha). Analysis of aerial images revealed a general progressive decrease in the peatland area between 1942 and 1969 in the good (Krugersland) and poor (Companjesdrift) condition class, with a marginal increase from 1969 to 2003. Peatland area in the good and poor condition class decreased by 5.3% and 8.3% respectively between 1942 and 1969, with a marginal increase of 1.5% and 4.1% respectively from 1969 to 2003. Annual net rate of change in peatland area over the 61 year period was -0.32% (good condition class) and - 0.79% (poor condition class). Transformed lands were impacted by drivers of change such as alien invasives, agricultural activities, erosion and sediment transport. The area under alien invasives increased by 50% between 1942 and 2003, with an annual net rate of change of +0.82 (good condition class) and +1.63% (poor condition class).
- Full Text:
- Date Issued: 2008
- Authors: Nsor, Collins Ayine
- Date: 2008
- Subjects: Kromme River (Eastern Cape, South Africa) , Peatland ecology -- South Africa -- Eastern Cape , Plant diversity conservation -- South Africa -- Eastern Cape , Peatland plants -- South Africa -- Eastern Cape , Peatlands -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Wetland conservation -- South Africa -- Eastern Cape , Ecosystem management -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4760 , http://hdl.handle.net/10962/d1007151 , Kromme River (Eastern Cape, South Africa) , Peatland ecology -- South Africa -- Eastern Cape , Plant diversity conservation -- South Africa -- Eastern Cape , Peatland plants -- South Africa -- Eastern Cape , Peatlands -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Wetland conservation -- South Africa -- Eastern Cape , Ecosystem management -- South Africa -- Eastern Cape
- Description: This study examined the current plant diversity status and the impact of drivers of change on the peat basins of the Kromme River peatland. It was conducted at six sites over sixty one years in the Eastern Cape Province of South Africa. I reviewed the rapid habitat and biodiversity loss of wetlands globally and discussed the distribution of wetlands and specifically peatlands in South Africa. Plant species diversity was assessed using Modified- Whittaker plots. The influence of environmental variables on floristic composition and distribution was investigated using ordination techniques (DCA and CCA). Land use dynamics were assessed by applying GIS techniques on orthorectified aerial images. Six different peat basins were subjectively classified into good, medium and poor condition peat basins. The good condition peat basin (Krugersland) was the most diverse in plant species (4.1 Shannon-Weiner’s index) (p> 0.20; F = 11.04; df = 2), with the highest mean number of plant species (32.5 ± 3.4). This was followed by the medium condition class (Kammiesbos) (26.5 ± 9.0) and poor condition class (Companjesdrift) (22.5 ± 8.9). On average, species composition was not evenly distributed across the peat basins (p> 0.21; F = 0.94; df = 2), since 77.8% of the Shannon-Weiner evenness index obtained were less than one. However, there were variations in plant species richness across six peat basins as confirmed by Oneway ANOVA test (p= 0.0008, F = 1241.6, df = 4). Key environmental variables that influenced plant species distribution and structure were erosion and grazing intensity, potassium, phosphorus, soil pH and calcium. Total species variance accounted for in the first two axes for ground cover and plant height were 40.7% and 56.4% respectively. Alien species (e.g. Acacia mearnsii and Conyza scabrida) were common in degraded peat basins, whereas good condition peat basins supported indigenous species (e.g., Cyperus denudatus, Chrysanthemoides monolifera and Digitaria eriantha). Analysis of aerial images revealed a general progressive decrease in the peatland area between 1942 and 1969 in the good (Krugersland) and poor (Companjesdrift) condition class, with a marginal increase from 1969 to 2003. Peatland area in the good and poor condition class decreased by 5.3% and 8.3% respectively between 1942 and 1969, with a marginal increase of 1.5% and 4.1% respectively from 1969 to 2003. Annual net rate of change in peatland area over the 61 year period was -0.32% (good condition class) and - 0.79% (poor condition class). Transformed lands were impacted by drivers of change such as alien invasives, agricultural activities, erosion and sediment transport. The area under alien invasives increased by 50% between 1942 and 2003, with an annual net rate of change of +0.82 (good condition class) and +1.63% (poor condition class).
- Full Text:
- Date Issued: 2008
Biodiversity of Salmonella strains isolated from selected water sources and wastewater discharge points in the Easern Cape Province of South Africa
- Authors: Mafu, Nwabisa Charity
- Date: 2008
- Subjects: Biodiversity conservation -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Salmonella typhimurium
- Language: English
- Type: Thesis , Masters , MSc (Microbiology)
- Identifier: vital:11248 , http://hdl.handle.net/10353/74 , Biodiversity conservation -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Salmonella typhimurium
- Description: In this study, the diversity of forty Salmonella isolates from selected drinking water and wastewater sources in the Eastern Cape Province of South Africa was assessed using parameters such as protein and lipopolysaccharide profile analysis, DNA fingerprinting and antibiotic susceptibility profile as test indices. Wastewater samples from Amalinda, Shornville and Fort Hare wastewater plants, and water samples from Gogogo and Tyume rivers were collected on ice and transported to the laboratory of the department of Microbiology and Biochemistry, University of Fort Hare for processing. The DNA dendograms of Salmonella and the applied UPGMA revealed 4 similarity groups of the strains. Most of the strains recovered from Amalinda, Shornville, Fort Hare wastewater plants, Gogogo and Tyume rivers show a high percentage of genetic similarity. On the other hand, protein dendograms of Salmonella isolates revealed 2 similarity groups which varied widely. Also, the lipopolysaccharide dendograms revealed three similarity groups with the first similarity groups showing a very high relatedness between strains from different water sources. The second similarity group included 16 strains which formed a rather homogenous group, and the third similarity group formed a distinct group. Of the seven antibiotics and sulfonamides tested against the Salmonella species, five namely, neomycin, chloramphenicol, kanamycin, streptomycin and cotrimoxazole were significantly inhibitory, while the bacteria showed considerable resistance to doxycycline and sulphamethoxazole. Our results based on restriction digestion, SDS/PAGE and dendogram construction show that there is a high similarity between the forty Salmonella strains studied, and that these methods are valuable tools for evaluating the relatedness ofSalmonella species. Our observations have proffered a veritable reference point on the diversity of Salmonella strains in the studied area.
- Full Text:
- Date Issued: 2008
- Authors: Mafu, Nwabisa Charity
- Date: 2008
- Subjects: Biodiversity conservation -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Salmonella typhimurium
- Language: English
- Type: Thesis , Masters , MSc (Microbiology)
- Identifier: vital:11248 , http://hdl.handle.net/10353/74 , Biodiversity conservation -- South Africa -- Eastern Cape , Biodiversity -- South Africa -- Eastern Cape , Salmonella typhimurium
- Description: In this study, the diversity of forty Salmonella isolates from selected drinking water and wastewater sources in the Eastern Cape Province of South Africa was assessed using parameters such as protein and lipopolysaccharide profile analysis, DNA fingerprinting and antibiotic susceptibility profile as test indices. Wastewater samples from Amalinda, Shornville and Fort Hare wastewater plants, and water samples from Gogogo and Tyume rivers were collected on ice and transported to the laboratory of the department of Microbiology and Biochemistry, University of Fort Hare for processing. The DNA dendograms of Salmonella and the applied UPGMA revealed 4 similarity groups of the strains. Most of the strains recovered from Amalinda, Shornville, Fort Hare wastewater plants, Gogogo and Tyume rivers show a high percentage of genetic similarity. On the other hand, protein dendograms of Salmonella isolates revealed 2 similarity groups which varied widely. Also, the lipopolysaccharide dendograms revealed three similarity groups with the first similarity groups showing a very high relatedness between strains from different water sources. The second similarity group included 16 strains which formed a rather homogenous group, and the third similarity group formed a distinct group. Of the seven antibiotics and sulfonamides tested against the Salmonella species, five namely, neomycin, chloramphenicol, kanamycin, streptomycin and cotrimoxazole were significantly inhibitory, while the bacteria showed considerable resistance to doxycycline and sulphamethoxazole. Our results based on restriction digestion, SDS/PAGE and dendogram construction show that there is a high similarity between the forty Salmonella strains studied, and that these methods are valuable tools for evaluating the relatedness ofSalmonella species. Our observations have proffered a veritable reference point on the diversity of Salmonella strains in the studied area.
- Full Text:
- Date Issued: 2008
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